MELO3C026549.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026549.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	chr03 : 24820317 .. 24823123 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGGGGTGGAGGAGTAGTGAGAGAAGGTCCACGCAGCGCATTCCAACAAACAAACCCCCCTCAACCTGAACCACAGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCACAATTCCTTGTTCGATTCCTTTGTCGCTGTTTTCGTTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGTACCCTTCTTCTTTCTTCTTCTTTTTTTCCCTTCAGATTCTTAACTTTCGCTGTTTTTTTACGTTTTCTTTTCAATTGGGTCATCGATCAGCTACGCCCCTTCTGTTCTTTCTATGCTCATTTACAGGATTCGGATCATTGCACATGTTCGTTGTTGTGTCACCAATTTGTGCGAATCTGTTCTGTTTGTTTTATTAGGTCATTAGAATTTGAAATTTGTTGAGATCGTTTTCCGATTGTTGATTTCTTATATGCTGGGTAGGTGTTGTTTAATAGAAAAGAGGAGGGATTTTGGTACTTGAAACGGAATTCTCATAAGCATAGGTCTGGATGCATCATGTCGTCCACTCGGTTTCGAGATTTTGGCTTTGTCGGATGATGTGCTATTCTAATTGTTCTATTGAATTTCTTTACGTTTTCGAGAAGCATGGTCGCGAGTCCCTTTAGTAGTGGCTTGGGAAATTTCATGTACTATCCTGCTTAGCATCAAATCCTTTGCCTATATTCCTTTGATCGCCAGAGGGACGTTTGTGCTATGATCAATGAGTTCCTCTTCAATCCACCTGGAGGGTGTGTGTACACAATCATGTGGGATTTGGGGGCTGGGCGGAATGGTAGGATCTTAGAGGGGTGGAAAAGGACTACCGAGATTTGTTCCCTTCTTCGTTTCCATGTTTCCTTGTCGGCTTCAATTTCGAAGACATGTTGCAATTATTTCTTAGGTGTTATTTTGCTTAGTTGGAGCTCCTTCTTATAGGATTGTGCCTTTTTTTGTGGGCTGGGTTATTTGTATGCCCATATATTCTTTCGTTCTTTCTCGATAAAAGCTGTTTTTTCTATATGGGAAAAAAAATTCAATGCTCATTTTATGTGATGGGATATTGAAAGATACCCGTGATGGTGGAAATGAATAAGATTATAAGTATCAGTTGATAGAGTTCTGTCTTTTATCTTGCCTTGATTGCTAATTGCACTCCACTGAAGGAAAGTATTTTGGAAATTGCACCATAAAATCTTCAATAAGGACTTTTGTTCTCCAAAAGAAAAGGAAAACTACATGTACTTCTGTTTTAGCTTCCTATTATGTATCACTAGCGAGTGAAGTTCTACTTTCAAATAACAAGGTCTTGAGAATACGTTTTCTTGTTTGTAATTGTTAATTTTTCTAGTGTAAATTGGGAAAAGAACTTTTTATATTTTTTTAGCACGATGTTTGATCAATGTCATTTGCTTGTTTTAGGTTCAAAAGAATGTCATGTCAGTGCATAAAAATGGAAGTTGGAAGTGCAAGATTATGTATGATAGGTGATTGATAGGAACCTAATTTGCATTTTTGCTTTGAAATAGTTCATTATTGATTAAGAAGTTTCACTTATGCCAACCGATGCATCTTCTCATCTTATGAGGCAATATATCCTTTTAGATATCGGCAGGCTTGACTTTGTGCTACTGTGCGTATCAAAAGAATAACACATTCTTTTGATAGAAACAAATTGCTTTCATCAAGAAGAAAATGAAAGAATACTAAGGCACATAGGGAGAAAAAATCAAGCCCACAAAAACCATATTAAAGAATGAAAGGAGGATCAACTAAGTAAAATGGTGTCTAAGGAATAATTACAAAAGATCCTCGAAGAAGTCCAACAAGAAACATGAAACCTAGATAAGAACTAAATTCCACCCCAAAGATCTCATAACAAAGTGTGCACGCACCCCACCAATCCATAAAATGTCTTTCTTTCTCACTAAAAGGTAGATGGAGGAGGAATGTCTCTAACACATTCTTTATTGAAAGGTTTATGTATGATTGGATTCTCTTTTCTGTTAGCAAGAACAATGAATTATCTGTCTGCGATGGTAATCGATGTGATATAACTTCTAATGTGACTTTTGGTTGATGTTGTTTTGGATGCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTTATAATACTATCGTTCTTGGTGTTCTCGGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGAAAATCTCATAGTAGAAGGAGAGTTATACTAAACCCTTTTTTCTTTTTTTTTTAATTGTTCTAAATTCCCTGAATTATATTCACAAAAAATTAGATTTTGCTCTTTCTCTTTCCCCACTACTCTTTATTATATCCTGATCTGTAATCACCAGGAAAGCAGGTTTATCCCTCCCTTAAAAAAAAAGAAAGAAGAATGAGATGAATGTGATTAGTTTAGAAATTCATTTGTGAATGCTCTTTTATCTGTGAGTTTGGATCATCTTCCTGATTTACTGATTGTTCTTTTACTCCTATTCCCAGTGACGTTTTGGAAATGATTCTAAAATAGATAGAATTTATTCTCATC

mRNA sequence

GTGGGGGGTGGAGGAGTAGTGAGAGAAGGTCCACGCAGCGCATTCCAACAAACAAACCCCCCTCAACCTGAACCACAGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCACAATTCCTTGTTCGATTCCTTTGTCGCTGTTTTCGTTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTTATAATACTATCGTTCTTGGTGTTCTCGGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGAAAATCTCATAGTAGAAGGAGAGTTATACTAAACCCTTTTTTCTTTTTTTTTTAATTGTTCTAAATTCCCTGAATTATATTCACAAAAAATTAGATTTTGCTCTTTCTCTTTCCCCACTACTCTTTATTATATCCTGATCTGTAATCACCAGGAAAGCAGGTTTATCCCTCCCTTAAAAAAAAAGAAAGAAGAATGAGATGAATGTGATTAGTTTAGAAATTCATTTGTGAATGCTCTTTTATCTGTGAGTTTGGATCATCTTCCTGATTTACTGATTGTTCTTTTACTCCTATTCCCAGTGACGTTTTGGAAATGATTCTAAAATAGATAGAATTTATTCTCATC

Coding sequence (CDS)

GTGGGGGGTGGAGGAGTAGTGAGAGAAGGTCCACGCAGCGCATTCCAACAAACAAACCCCCCTCAACCTGAACCACAGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCACAATTCCTTGTTCGATTCCTTTGTCGCTGTTTTCGTTCCTCCATTCTTCACCTTCCCTCTTCCTCCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTTATAATACTATCGTTCTTGGTGTTCTCGGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA

Protein sequence

VGGGGVVREGPRSAFQQTNPPQPEPQRIERLMLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

Homology

[Close]

BLAST of MELO3C026549.2 vs. NCBI nr
Match: XP_008464874.1 (PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 4.9e-68
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of MELO3C026549.2 vs. NCBI nr
Match: XP_004144225.1 (PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus] >KGN47556.1 hypothetical protein Csa_6G358690 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 9.3e-67
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSLNSISQFLV FLCRCF SSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of MELO3C026549.2 vs. NCBI nr
Match: XP_022951473.1 (uncharacterized protein LOC111454282 [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 2.0e-53
Identity = 128/151 (84.77%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 31  LMLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQ 90
           L LSLNSISQFL+ F+  CF+SS LH   +S EAK+ RSRG  +AMITRSNLVEQLREYQ
Sbjct: 18  LSLSLNSISQFLLHFVSHCFKSSDLHRRPTSPEAKETRSRG--AAMITRSNLVEQLREYQ 77

Query: 91  IRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVC 150
           IRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVC
Sbjct: 78  IRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVC 137

Query: 151 ITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           ITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 138 ITMLLLICMKVTKQVRLARKKKRRMLLPLSM 166

[Close]

BLAST of MELO3C026549.2 vs. NCBI nr
Match: XP_022946845.1 (uncharacterized protein LOC111450786 [Cucurbita moschata])

HSP 1 Score: 209.5 bits (532), Expect = 9.3e-51
Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSLNSISQFLV F+C C +  ILH   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQL F+LVCI
Sbjct: 61  RSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of MELO3C026549.2 vs. NCBI nr
Match: XP_022999777.1 (uncharacterized protein LOC111494024 [Cucurbita maxima])

HSP 1 Score: 207.6 bits (527), Expect = 3.5e-50
Identity = 121/150 (80.67%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSLNSISQFLV F+C C +  I H   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPIFHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQL F+L+CI
Sbjct: 61  RSKHDWASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLICI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of MELO3C026549.2 vs. TAIR10
Match: AT1G20460.1 (unknown protein)

HSP 1 Score: 170.6 bits (431), Expect = 8.7e-43
Identity = 92/106 (86.79%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 76  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAV 135
           MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL+IL+F VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFFVFSAV 60

Query: 136 SLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           SLYF+ +QLAFILVC+T+LLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 61  SLYFKRLQLAFILVCVTLLLLICMKVTKQVRLARKKKRRMLLPLSM 106

[Close]

BLAST of MELO3C026549.2 vs. TAIR10
Match: AT1G76185.1 (unknown protein)

HSP 1 Score: 165.2 bits (417), Expect = 3.6e-41
Identity = 89/106 (83.96%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 76  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAV 135
           MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL++L+ +VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVMLALVVFSAV 60

Query: 136 SLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           SLYFR +QLAFIL+C+T+LLLLCMK+TKQVR ARKKKRRMLLPLSM
Sbjct: 61  SLYFRRLQLAFILLCVTLLLLLCMKITKQVRHARKKKRRMLLPLSM 106

[Close]

BLAST of MELO3C026549.2 vs. TrEMBL
Match: tr|A0A1S3CMK7|A0A1S3CMK7_CUCME (uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502637 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.2e-68
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of MELO3C026549.2 vs. TrEMBL
Match: tr|A0A0A0KIH9|A0A0A0KIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358690 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 6.1e-67
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSLNSISQFLV FLCRCF SSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of MELO3C026549.2 vs. TrEMBL
Match: tr|A0A1U8JGS8|A0A1U8JGS8_GOSHI (uncharacterized protein LOC107905665 OS=Gossypium hirsutum OX=3635 GN=LOC107905665 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 106/150 (70.67%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 91
           MLSL      +   LC+  + +   +       + + S      MITRSNL EQLREYQI
Sbjct: 1   MLSLALFLAPIRILLCKFSKFNDFLISKHQESTRPKGSERRKETMITRSNLAEQLREYQI 60

Query: 92  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 151
           RSKH+WASVSFFSSTSN+TSSRVDVV+FVIWEL+IL+FLVFSAVSLYFRHMQLAFILVCI
Sbjct: 61  RSKHDWASVSFFSSTSNLTSSRVDVVVFVIWELVILAFLVFSAVSLYFRHMQLAFILVCI 120

Query: 152 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           TMLLLLCMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of MELO3C026549.2 vs. TrEMBL
Match: tr|A0A0B0P7M3|A0A0B0P7M3_GOSAR (NADH-ubiquinone oxidoreductase chain 5 OS=Gossypium arboreum OX=29729 GN=F383_03918 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 110/152 (72.37%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRC--FRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREY 91
           MLSL      +   LC+   F   ++     S   K R  R     MITRSNL EQLREY
Sbjct: 1   MLSLALFLAPIRILLCKFSNFNDFLISKHQESTRPKGRERR--KETMITRSNLAEQLREY 60

Query: 92  QIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILV 151
           QIRSKH+WASVSFFSSTSN+TSSRVDVV+FVIWEL+IL+FLVFSAVSLYFRHMQLAFILV
Sbjct: 61  QIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIWELVILAFLVFSAVSLYFRHMQLAFILV 120

Query: 152 CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           CITMLLLLCMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 121 CITMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of MELO3C026549.2 vs. TrEMBL
Match: tr|A0A0D2TSE9|A0A0D2TSE9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G189400 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 110/152 (72.37%), Postives = 120/152 (78.95%), Query Frame = 0


Query: 32  MLSLNSISQFLVRFLCRC--FRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREY 91
           MLSL      +   LC+   F   ++     S   K R  R     MITRSNL EQLREY
Sbjct: 1   MLSLALFLAPIRILLCKFSKFNDFLISKHQESTRPKGRERR--KETMITRSNLAEQLREY 60

Query: 92  QIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILV 151
           QIRSKH+WASVSFFSSTSN+TSSRVDVV+FVIWEL+IL+FLVFSAVSLYFRHMQLAFILV
Sbjct: 61  QIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIWELVILAFLVFSAVSLYFRHMQLAFILV 120

Query: 152 CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 182
           CITMLLLLCMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 121 CITMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

The following BLAST results are available for this feature:

BLAST of MELO3C026549.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464874.1	4.9e-68	100.00	PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]	[more]
XP_004144225.1	9.3e-67	98.67	PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus] >KGN47556.1 hy...	[more]
XP_022951473.1	2.0e-53	84.77	uncharacterized protein LOC111454282 [Cucurbita moschata]	[more]
XP_022946845.1	9.3e-51	82.00	uncharacterized protein LOC111450786 [Cucurbita moschata]	[more]
XP_022999777.1	3.5e-50	80.67	uncharacterized protein LOC111494024 [Cucurbita maxima]	[more]

BLAST of MELO3C026549.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20460.1	8.7e-43	86.79	unknown protein	[more]
AT1G76185.1	3.6e-41	83.96	unknown protein	[more]

BLAST of MELO3C026549.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C026549.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CMK7\|A0A1S3CMK7_CUCME	3.2e-68	100.00	uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KIH9\|A0A0A0KIH9_CUCSA	6.1e-67	98.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358690 PE=4 SV=1	[more]
tr\|A0A1U8JGS8\|A0A1U8JGS8_GOSHI	2.3e-42	70.67	uncharacterized protein LOC107905665 OS=Gossypium hirsutum OX=3635 GN=LOC1079056...	[more]
tr\|A0A0B0P7M3\|A0A0B0P7M3_GOSAR	3.1e-42	72.37	NADH-ubiquinone oxidoreductase chain 5 OS=Gossypium arboreum OX=29729 GN=F383_03...	[more]
tr\|A0A0D2TSE9\|A0A0D2TSE9_GOSRA	3.1e-42	72.37	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G189400 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026549.2.1	MELO3C026549.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR34936:SF1	SUBFAMILY NOT NAMED	coord: 76..181
None	No IPR available	PANTHER	PTHR34936	FAMILY NOT NAMED	coord: 76..181

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026549.2	Csa6G358690	Cucumber (Chinese Long) v2	cumedB447
MELO3C026549.2	CSPI06G18800	Wild cucumber (PI 183967)	cpimedB456
MELO3C026549.2	Cucsa.077680	Cucumber (Gy14) v1	cgymedB079
MELO3C026549.2	CmaCh05G009940	Cucurbita maxima (Rimu)	cmamedB819
MELO3C026549.2	CmaCh12G006660	Cucurbita maxima (Rimu)	cmamedB179
MELO3C026549.2	CmoCh05G010120	Cucurbita moschata (Rifu)	cmomedB814
MELO3C026549.2	CmoCh12G006050	Cucurbita moschata (Rifu)	cmomedB169
MELO3C026549.2	Lsi08G008050	Bottle gourd (USVL1VR-Ls)	lsimedB490
MELO3C026549.2	Cp4.1LG11g08040	Cucurbita pepo (Zucchini)	cpemedB113
MELO3C026549.2	Cp4.1LG07g05940	Cucurbita pepo (Zucchini)	cpemedB899
MELO3C026549.2	ClCG08G009600	Watermelon (Charleston Gray)	medwcgB289
MELO3C026549.2	Cla97C08G152360	Watermelon (97103) v2	medwmbB290
MELO3C026549.2	Bhi04G001224	Wax gourd	medwgoB341
MELO3C026549.2	Carg21863	Silver-seed gourd	carmedB0221
MELO3C026549.2	Carg17655	Silver-seed gourd	carmedB0139
MELO3C026549.2	CsaV3_6G031700	Cucumber (Chinese Long) v3	cucmedB465

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026549.2	Cucumber (Gy14) v2	cgybmedB405
MELO3C026549.2	Watermelon (97103) v1	medwmB296