CmaCh12G006660 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G006660
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	NADH-ubiquinone oxidoreductase chain 5
Location	Cma_Chr12 : 3578859 .. 3580761 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACGAACAACAAATAAGGGAAGGACCGAATTCAACGCTCCTGCTCTCTCTCTTTCTCTCAATTCCATTTCTCAATTCCTCCTTCACTTCGTCTCTCACTGTTTCAAATCATCCGATCTCCACTGTCGCCCTACCTCCCCTGAGCCGAAGGAAACAAGGTCTCGGGGCGCTGCCATGATTACTCGGTCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCGAAGCACGAGTGGGCTTCCGTCTCCTTATTTTCATCTGCCTCCAACATTACTTCTTCCAGGTATTTCCAACCCCAATCCGTTAATTTCAATCCCCCCTTTCGTTTCTGCTTTCGATTTCCTTGTCTCCCAGATTCGTAATTCTTTCTTTTATACCTATGCTTCTGATTCTGAGATTTTGATTCTTGGGATTCTGAATTTATGGCGTTGGTTTTGTTTTGCTTTGAATTGGGCTGGTTATGTTCGATGAAATAGGGTTTTGTTCTTTAAACGCTGAATTCATGATGGGATTTGGGATCATTGCACACGTTGGCAAATTCTGTCCCCAATTTCTTTTGTTTTGTATGAATTTATGATGGTTTCTTCTCTCGATAAGCTTTGGAATTTTGTAAGATCGTTTTGGAAATGTTGGTTTCATGTGGAATTCGGTACTTGAAATGGGATTCTCATAGATAAATTTCATGACAAGATGCATCATGTCATCCTCTGGATGTCAAGATAATTGCTTTGTCCAACGATGTGCTATGGTAATTGTTCAATTGAAGTTCCTTTATGCAAGTAATTAATTTTTCGTGAGCTTGGTCATGAGTGCCTTCAGCCATAGCCTGTAAATTTCTTGTACTCCTAGCTTAGCATCAAATCAGAAGTTCATTTATGTAACTGGATATTGACAGATACTCCTGACTTCCGAAATAATTAAAATTATGACTATGAGTTTCTTTTGACAGAGTTCTGTCTTTATAGCCTGCATTGATTGCTAATTGCGTTGTTCACATGATGAAGAAATGTTGAAAATTGGGCCAAAGTTCTCAGATTCTTCTATTAGGATTTCTGGTTCCTAAAAAAAACCTATTGTATTTTAGTTTTAGCATCCAATTATCTATCTCTCGGGAGTAAAGTTCTAAGTTTCAAATTTCATGATCTTGGATATACGTTTTCTTTGAGTTAGTTGGTGATTGATTAAGAAGAATTTTCACTCATACCAACTGATGTATCTTTTCATCTTATGTACAATTTATTCAAATAGATATCCATAGGGTGGTCTGTGTGAGTGTCCATTACAACTTCGTGTGATTGTACATTACAACTTTTGTATTGTTCGGTTTATGTATGTTATGTTGGGATTCGCTCTCCTGTTAGAACGAACATGAATTAGATCCTAATTGTGGTTTATTATGTACGCACGATGTGTCATTTCTGACGATATGCATTTTGGTTCGTCCATTTGTTTATGCAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCATTCTTGGTCTTTTCGGCAGTGTCTTTATATTTTCGACATATGCAATTGGCTTCTATTTTAGTGTGTGTTACGATGCTGTTACTTATATGCATGAAAGTTACGAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGAATGCTTCTTCCATTGTCGATGTGAAAAGGTAACAACAGTGCAGAGACATACTAAACTTTTATATGTTCTTTCCAAATGTCCCAAATTATGTTCACAAAAGTTAGATTTGGTCCTATCTTTGTTATATTGGGATCTGTAATGAGCAGGAAAGCAGATTGTTTGAAAAATGGAATGAGATATGAGTGAGTTGTTTAGGAGTTTGGCTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC

mRNA sequence

GGACGAACAACAAATAAGGGAAGGACCGAATTCAACGCTCCTGCTCTCTCTCTTTCTCTCAATTCCATTTCTCAATTCCTCCTTCACTTCGTCTCTCACTGTTTCAAATCATCCGATCTCCACTGTCGCCCTACCTCCCCTGAGCCGAAGGAAACAAGGTCTCGGGGCGCTGCCATGATTACTCGGTCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCGAAGCACGAGTGGGCTTCCGTCTCCTTATTTTCATCTGCCTCCAACATTACTTCTTCCAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCATTCTTGGTCTTTTCGGCAGTGTCTTTATATTTTCGACATATGCAATTGGCTTCTATTTTAGTGTGTGTTACGATGCTGTTACTTATATGCATGAAAGTTACGAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGAATGCTTCTTCCATTGTCGATGTGAAAAGGTAACAACAGTGCAGAGACATACTAAACTTTTATATGTTCTTTCCAAATGTCCCAAATTATGTTCACAAAAGTTAGATTTGGTCCTATCTTTGTTATATTGGGATCTGTAATGAGCAGGAAAGCAGATTGTTTGAAAAATGGAATGAGATATGAGTGAGTTGTTTAGGAGTTTGGCTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC

Coding sequence (CDS)

GGACGAACAACAAATAAGGGAAGGACCGAATTCAACGCTCCTGCTCTCTCTCTTTCTCTCAATTCCATTTCTCAATTCCTCCTTCACTTCGTCTCTCACTGTTTCAAATCATCCGATCTCCACTGTCGCCCTACCTCCCCTGAGCCGAAGGAAACAAGGTCTCGGGGCGCTGCCATGATTACTCGGTCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCGAAGCACGAGTGGGCTTCCGTCTCCTTATTTTCATCTGCCTCCAACATTACTTCTTCCAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCATTCTTGGTCTTTTCGGCAGTGTCTTTATATTTTCGACATATGCAATTGGCTTCTATTTTAGTGTGTGTTACGATGCTGTTACTTATATGCATGAAAGTTACGAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGAATGCTTCTTCCATTGTCGATGTGA

Protein sequence

GRTTNKGRTEFNAPALSLSLNSISQFLLHFVSHCFKSSDLHCRPTSPEPKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM

Homology

[Close]

BLAST of CmaCh12G006660 vs. TrEMBL
Match: A0A0A0KIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358690 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.9e-53
Identity = 125/149 (83.89%), Postives = 133/149 (89.26%), Query Frame = 1


Query: 18  LSLNSISQFLLHFVSHCFKSSDLHCRPTSPEPKETRSRG--AAMITRSNLVEQLREYQIR 77
           LSLNSISQFL+ F+  CF SS LH   +S E K+ RSRG  +AMITRSNLVEQLREYQIR
Sbjct: 2   LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIR 61

Query: 78  SKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCVT 137
           SKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVC+T
Sbjct: 62  SKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT 121

Query: 138 MLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           MLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 122 MLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. TrEMBL
Match: A0A0B0P7M3_GOSAR (NADH-ubiquinone oxidoreductase chain 5 OS=Gossypium arboreum GN=F383_03918 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 99/119 (83.19%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 46  SPEPKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIW 105
           S  PK    R   MITRSNL EQLREYQIRSKH+WASVS FSS SN+TSSRVDVV+FVIW
Sbjct: 32  STRPKGRERRKETMITRSNLAEQLREYQIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIW 91

Query: 106 ELIILAFLVFSAVSLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           EL+ILAFLVFSAVSLYFRHMQLA ILVC+TMLLL+CMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 92  ELVILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. TrEMBL
Match: A0A0D2TSE9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G189400 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-42
Identity = 99/119 (83.19%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 46  SPEPKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIW 105
           S  PK    R   MITRSNL EQLREYQIRSKH+WASVS FSS SN+TSSRVDVV+FVIW
Sbjct: 32  STRPKGRERRKETMITRSNLAEQLREYQIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIW 91

Query: 106 ELIILAFLVFSAVSLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           EL+ILAFLVFSAVSLYFRHMQLA ILVC+TMLLL+CMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 92  ELVILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. TrEMBL
Match: B9H5E7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26950g PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.1e-40
Identity = 95/114 (83.33%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 51  ETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIIL 110
           E + +   MITRSNL +QLREYQIRSKH+WASVS FSSASNI+SSRVDVV+FVIWEL I+
Sbjct: 61  EAKRQTIKMITRSNLADQLREYQIRSKHDWASVSFFSSASNISSSRVDVVVFVIWELFII 120

Query: 111 AFLVFSAVSLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           AFLVFSAVSLYFRHM+LA ILVC+T+LLLICMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 121 AFLVFSAVSLYFRHMRLAFILVCITLLLLICMKVTKQVRLARKKKRRMLLPLSM 174

[Close]

BLAST of CmaCh12G006660 vs. TrEMBL
Match: A9PEN2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.0e-40
Identity = 94/106 (88.68%), Postives = 102/106 (96.23%), Query Frame = 1


Query: 59  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAV 118
           MITRSNL +QLREYQIRSKH+WASVS FSSASNI+SSRVDVV+FVIWEL I+AFLVFSAV
Sbjct: 1   MITRSNLADQLREYQIRSKHDWASVSFFSSASNISSSRVDVVVFVIWELFIIAFLVFSAV 60

Query: 119 SLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           SLYFRHM+LA ILVC+T+LLLICMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 61  SLYFRHMRLAFILVCITLLLLICMKVTKQVRLARKKKRRMLLPLSM 106

[Close]

BLAST of CmaCh12G006660 vs. TAIR10
Match: AT1G20460.1 (AT1G20460.1 unknown protein)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 92/106 (86.79%), Postives = 99/106 (93.40%), Query Frame = 1


Query: 59  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAV 118
           MITRSNL EQLREYQIRSKH+WASVS FSS SN +SSRVDVV+FVIWEL+ILAF VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFFVFSAV 60

Query: 119 SLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           SLYF+ +QLA ILVCVT+LLLICMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 61  SLYFKRLQLAFILVCVTLLLLICMKVTKQVRLARKKKRRMLLPLSM 106

[Close]

BLAST of CmaCh12G006660 vs. TAIR10
Match: AT1G76185.1 (AT1G76185.1 unknown protein)

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-39
Identity = 87/106 (82.08%), Postives = 98/106 (92.45%), Query Frame = 1


Query: 59  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAV 118
           MITRSNL EQLREYQIRSKH+WASVS FSS SN +SSRVDVV+FVIWEL++LA +VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVMLALVVFSAV 60

Query: 119 SLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           SLYFR +QLA IL+CVT+LLL+CMK+TKQVR ARKKKRRMLLPLSM
Sbjct: 61  SLYFRRLQLAFILLCVTLLLLLCMKITKQVRHARKKKRRMLLPLSM 106

[Close]

BLAST of CmaCh12G006660 vs. NCBI nr
Match: gi|659129843|ref|XP_008464874.1| (PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 9.3e-54
Identity = 125/149 (83.89%), Postives = 134/149 (89.93%), Query Frame = 1


Query: 18  LSLNSISQFLLHFVSHCFKSSDLHCRPTSPEPKETRSRG--AAMITRSNLVEQLREYQIR 77
           LSLNSISQFL+ F+  CF+SS LH   +S E K+ RSRG  +AMITRSNLVEQLREYQIR
Sbjct: 2   LSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIR 61

Query: 78  SKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCVT 137
           SKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVC+T
Sbjct: 62  SKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT 121

Query: 138 MLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           MLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 122 MLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. NCBI nr
Match: gi|449452957|ref|XP_004144225.1| (PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53
Identity = 125/149 (83.89%), Postives = 133/149 (89.26%), Query Frame = 1


Query: 18  LSLNSISQFLLHFVSHCFKSSDLHCRPTSPEPKETRSRG--AAMITRSNLVEQLREYQIR 77
           LSLNSISQFL+ F+  CF SS LH   +S E K+ RSRG  +AMITRSNLVEQLREYQIR
Sbjct: 2   LSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIR 61

Query: 78  SKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCVT 137
           SKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLA ILVC+T
Sbjct: 62  SKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCIT 121

Query: 138 MLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           MLLL+CMKVTKQVRLARKKKRRMLLPLSM
Sbjct: 122 MLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. NCBI nr
Match: gi|823229177|ref|XP_012447331.1| (PREDICTED: uncharacterized protein LOC105770600 [Gossypium raimondii])

HSP 1 Score: 180.3 bits (456), Expect = 2.8e-42
Identity = 99/119 (83.19%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 46  SPEPKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIW 105
           S  PK    R   MITRSNL EQLREYQIRSKH+WASVS FSS SN+TSSRVDVV+FVIW
Sbjct: 32  STRPKGRERRKETMITRSNLAEQLREYQIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIW 91

Query: 106 ELIILAFLVFSAVSLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           EL+ILAFLVFSAVSLYFRHMQLA ILVC+TMLLL+CMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 92  ELVILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. NCBI nr
Match: gi|728841444|gb|KHG20887.1| (NADH-ubiquinone oxidoreductase chain 5 [Gossypium arboreum])

HSP 1 Score: 180.3 bits (456), Expect = 2.8e-42
Identity = 99/119 (83.19%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 46  SPEPKETRSRGAAMITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIW 105
           S  PK    R   MITRSNL EQLREYQIRSKH+WASVS FSS SN+TSSRVDVV+FVIW
Sbjct: 32  STRPKGRERRKETMITRSNLAEQLREYQIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIW 91

Query: 106 ELIILAFLVFSAVSLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           EL+ILAFLVFSAVSLYFRHMQLA ILVC+TMLLL+CMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 92  ELVILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKITKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of CmaCh12G006660 vs. NCBI nr
Match: gi|1009133820|ref|XP_015884109.1| (PREDICTED: uncharacterized protein LOC107419811 [Ziziphus jujuba])

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1


Query: 59  MITRSNLVEQLREYQIRSKHEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAV 118
           MITRSNL EQLREYQIRSKH+WASVS FSS SN TSSRVDVVIFVIWEL+ILAFLVFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFTSSRVDVVIFVIWELVILAFLVFSAV 60

Query: 119 SLYFRHMQLASILVCVTMLLLICMKVTKQVRLARKKKRRMLLPLSM 165
           SLYFRHMQLA IL+C+TMLLL+CMK+TKQVRLARKKKRRMLLPLSM
Sbjct: 61  SLYFRHMQLAFILICITMLLLLCMKITKQVRLARKKKRRMLLPLSM 106

The following BLAST results are available for this feature:

BLAST of CmaCh12G006660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh12G006660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIH9_CUCSA	1.9e-53	83.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G358690 PE=4 SV=1	[more]
A0A0B0P7M3_GOSAR	2.0e-42	83.19	NADH-ubiquinone oxidoreductase chain 5 OS=Gossypium arboreum GN=F383_03918 PE=4 ...	[more]
A0A0D2TSE9_GOSRA	2.0e-42	83.19	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G189400 PE=4 SV=1	[more]
B9H5E7_POPTR	3.1e-40	83.33	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s26950g PE=4 SV=1	[more]
A9PEN2_POPTR	7.0e-40	88.68	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of CmaCh12G006660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20460.1	1.1e-41	86.79	unknown protein	[more]
AT1G76185.1	1.4e-39	82.08	unknown protein	[more]

BLAST of CmaCh12G006660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129843\|ref\|XP_008464874.1\|	9.3e-54	83.89	PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]	[more]
gi\|449452957\|ref\|XP_004144225.1\|	2.7e-53	83.89	PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus]	[more]
gi\|823229177\|ref\|XP_012447331.1\|	2.8e-42	83.19	PREDICTED: uncharacterized protein LOC105770600 [Gossypium raimondii]	[more]
gi\|728841444\|gb\|KHG20887.1\|	2.8e-42	83.19	NADH-ubiquinone oxidoreductase chain 5 [Gossypium arboreum]	[more]
gi\|1009133820\|ref\|XP_015884109.1\|	1.2e-40	89.62	PREDICTED: uncharacterized protein LOC107419811 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006660.1	CmaCh12G006660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34936	FAMILY NOT NAMED	coord: 54..164 score: 3.6
None	No IPR available	PANTHER	PTHR34936:SF1	SUBFAMILY NOT NAMED	coord: 54..164 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh12G006660	Cucsa.077680	Cucumber (Gy14) v1	cgycmaB0129
CmaCh12G006660	Csa6G358690	Cucumber (Chinese Long) v2	cmacuB195
CmaCh12G006660	MELO3C026549	Melon (DHL92) v3.5.1	cmameB164
CmaCh12G006660	ClCG08G009600	Watermelon (Charleston Gray)	cmawcgB175
CmaCh12G006660	CSPI06G18800	Wild cucumber (PI 183967)	cmacpiB198
CmaCh12G006660	CmoCh05G010120	Cucurbita moschata (Rifu)	cmacmoB201
CmaCh12G006660	CmoCh12G006050	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G006660	Lsi08G008050	Bottle gourd (USVL1VR-Ls)	cmalsiB190
CmaCh12G006660	Cp4.1LG07g05940	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G006660	Cp4.1LG11g08040	Cucurbita pepo (Zucchini)	cmacpeB181
CmaCh12G006660	MELO3C026549.2	Melon (DHL92) v3.6.1	cmamedB179
CmaCh12G006660	CsaV3_6G031700	Cucumber (Chinese Long) v3	cmacucB0224
CmaCh12G006660	Cla97C08G152360	Watermelon (97103) v2	cmawmbB200
CmaCh12G006660	Bhi04G001224	Wax gourd	cmawgoB0205
CmaCh12G006660	Carg17655	Silver-seed gourd	carcmaB0172
CmaCh12G006660	Carg21863	Silver-seed gourd	carcmaB0289

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh12G006660	CmaCh05G009940	Cucurbita maxima (Rimu)	cmacmaB201

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G006660	Watermelon (97103) v1	cmawmB153
CmaCh12G006660	Cucumber (Gy14) v2	cgybcmaB718