MELO3C026387.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTCAAAACCGATTATCTGCATGAACTCAAAAATATCATCAAACGCCGAAAGGACGAGGACAGCCATTTTTGTTCAAACTAGAGCTTTCTCAGATGCCTCAAACTCTAATTCTGAAGCCTGTTGTTTCAGCGCCTTTACCCAATTGGAGGTTTTGCTTAATTTTTCCTATTCCCTTAAACCCCTTCAATCCCCATTCACTTTTCGTATTTCTTCCCATTTGTTTTTGTCGGAAATTACTTGCTATTCTATGGAGTTCGAACGCTTGGATGTCGAGTTTTTGTATTTTCATTCTTTGCTGTACTGCATTTATACAATATGTTTAATGGGTTTCTATCATAATTCAAGTAGCTAACTCGAAAATTCCTGGCACTTTTTGTTGTTTTTATGACTCCTTAATGATCTGTTGTCTCGTTCTATCTCGTTGGAGAACTCTTTGTTGTTATCAGATTGTTTCACTTACGGAATTCGGAAGTGATGTATTTATGGATTGTTCAAGTTCTGCTTGATTCTGATGGGTTTTAGTACTTCTGGGGAAATGTTGGTTTTCAAGGTTCTTTAGGGTTCAATCATAGCTAGCATATAGAAATTTCTATTGGGTATATGTGCAGAGTTCTAATTCATCACCTAAATACAAAAATGGGGGGAAAAAGACAACTATGCACTGTTCTCTTTTTCTTTGTTGTTGTTTTTGCATCTGTGCAGATGTCTAGACTAATTTTGATCTACTGTAATGATTATTGGGCGTGCTCTGTTGTTCTTATTTCAGTAAATTGCAAGCACAAACACATTCTATTAGTTCCAATGTTAATGTACGTCGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGAAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCCGACGAGGCAGAGCAGAAGAAATGGAGGAGATTGATGAATGAAATAGAGGAGACAGGGTCTGCTGTTTCTGTACTTAGAAGCGAAAGGATTAAAAATGAGGCTATTCCGAAGGACTTGGTGCTGGGCACTTTGGTTAGGTTTAAACAACTAAAAAAATGGAACCTAGTCAGTGAGGTACAGAGCATAGACATTTGCATGATTTGATATTTTCTTGTGTTCTAGCAATTTTTGTTCTTTATAGGAGGAAAATAAAAGAATTTATTAGGGTCGGTTGCCTGAAATTAGACTTGAAGGGGTATAAAAATGCAGTCCAATTTAAGAAAATGCAATTCAGCATTTAATCTATTTTTTGCCTTAATGTTTGTGAAACAATTCAAATGCTATCCCTAAATCATTAATGTCTTCTTGTTGGAATTAGAAAGCCTACTTAAACACCTATGTTCATGTAAAAATTGTTCATCACAATGTGTGTTCGAACAACTTCAACAAGAATACCAAATATTTTCAGTTACAGGACGTGTTTCTCTGTCTTGCATGGCCATCATAACGTCAAAAAAGTATCTTCTACATAAGGGCGATGCATTGGTAATTTGTAGTTGCCTGTGTGAAATTGAACTCTAGGTGTGTTGGTAAGAATTATCTAGCTCCTCAGTTTGTCGATTGAATTACTTTATTTTAGTGAGTGAATGGCCCAAGTCTCTTCCTATTCTTAAGTCCTTTGTGTTACAATTTCCAATATGCAGATGTGCTGATTATTCAAATTCATGTTTTTTAACTGTCTTATAGATTCTTGAATGGCTCCGGACCCAAAGCTGGTGGAACTTTAGTGAAATGGATTTCGTGATGCTTATTACAGCTTATGGCAAGCTAGGGGACTTCAATCGTGCAGAAAAAGTTCTAAACTTGATGAATAAGAAGGGTTATGCCCCAAATGTTGTCTCTCATACTGCTCTCATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCTGGTGGTCCTGAACCTTCTGCACTGACCTATCAAATAATGCTAAAAACTTTTGTTGAGGTACTAATCTCAAACATATACTTATTTAAAGCCTTTCCAAAATATTCCTTTTTTTTTATCAGGTTAATCCTTCAGTTTGACTACCCTCTTGAAAATCAATAATGTTCTTAATCACTGTGAACTTTTGATGCCAAATTTTTGGCTTTTGTAAATTGTAACTGTATGTGCTTTTGGATATTATGTTCCAATGCAGAGTAATTATACTGGAATGGAACTTGAAATAGAAACTCTCCATATAAAGATATTGACCCAAAACAAAACTGATCCCAACCTGGAGATTTTATTATGTTGTTTTCTAACTGGTTTCCTTCTTCCAAGCTTACTTGATCTTCAAACGTATGCTGTTCTTGGTTTGTTTGTTGTTGTTCACAAAATGATGAGGCATTACTGCAGGGATCTAAATTCAAGGAAGCTGAGGAACTCTTTGACTCCCTCTTGAACAAGGAAAAGCCAGTGTTGAAGCCAGACCAAAAGATGTTCCACATGATAATTTACATGTTCAAGAAGGCTGGGAATTATGAAAAGGCTCGCAAAGTATTTGCGGAAATGGCAGCACGTGGAGTTCCACAGACTACAGTTACTTATAATAGTTTGATGTCTTTTGAAACTAACTACAAAGAGGTCTCAAAGATTTATGATCAGGTAAGCCAGTATGGTTGGACATTGTGCTACTTGCTCATATTATTTTTATGTGAGTGTATGTATTAAGAGTTTCTGGTGTAAGAAATTGTATGAGAAAGTTGTCCTGTAGGTTTGAGCAGTATTCTTTCTGAGCCACTGACTTTAGGAGTATACGCTGCATTCTTGCTAATTTATGAGAATTTAGTACTATTGCTACAAAAGTCTTATTAGGAGTCGTTTCTTTTTATTTTTAATCTTTTGAGGCAATAGCCAAGTGGTTCAGTAGGCAAGTGTATAACTGTGACATTTTCTGGATTGTGTGAATTGATAATTGATCAAATGATGTAGTAAATATTGGTAAAGTCCAGATTATAAGGATCTGAAATATCAAATATTTGCTCGCTTTCATTGCATCACAAGCATATTAGCAGCTGTTTTGTAGTTTGAGTTTTGTGAGACTGTTTTTGTTTCTGCGATGTTTTCAATGCCAACGAGACGCTCGGATTTTTTAATTCAAATTCCAAAACTGTAGATGCAAAGAGCTGGACTTAAGCCAGATGTTGTCAGCTATGCTTTACTCATAAGTGCCTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCGGTTTTTGAGGAAATGCTTGATGCTGGTATCAGGTACTTCCCCTCACACTTCTTTCTTTCAGCACATACAGTATCTGATTGGATATATATATATATATATATATATATATATATATATAAATAAAAACGCTCAGATTTTTTTTATATCTGTGAGTGTTCGGGCTAGCTCACGCGCACCTAGGAAATTAATTCCTAGGTAGGTAGCCACTATGGATCAAACCCATGACCTTTTAGTTACATATTGCCCTTTTTACCACTAGGTCAATTCACGATGGTTGATGGTTTTATCATATTTAGCAAAGTATAAAGTTTTATTCAAGTTTAGTGTACTCCAACCTATGAGTATTTGTATTGGTATCTTCCGTTAGAGTGTATATATATTAGTTTCGTGTTGCTATTTTGGTTCATATTCACTTTACACAACACCAAGCATGGCTGAACGAAGTGATGAATAGTAAGCCAAAATACTCATGCACTGATAACTTTTACGCCTGCTATTTTTCAGACCTACTCACAAAGCTTATAATATTTTGCTCGATGCATTTGCAATCTCTGGACTGGTCGAGCAAGCTAAGACCGTATTCAAGAGTATGAAAAGAGACAGGTAATAAACTGCTTCAATGGTTCCTGCACAAAAGATGTTATTTCACCATTCCTTTTTGGCTGCAGATTTCATTCTTTTTGCATGTATTTCCAGTAAGGGATTGCCATCATCGTTTCTTTGTTGCAGATGCAATCCAGACATTTGCTCTTATACAACCATGTTATCAGCTTATGTTAATGCATCTGACATGGAGGGAGCTGAAACTTTTTTTAGACGACTGAAACAAGATGGTTTTAGACCCAATGTTGTTACTTATGGTACATTGATCAAAGGATACGCCAAAATAAATAATCTTGAAAAGATGATTAAAAGATATGAAGAAATGAAGGTCAATGGTATACGTGTGAATCAAACGATTTTGACGACAATCATGGATGCATATGGAAAGAACAAAGATTTTGATAGTGCTGTTATTTGGTTCAAGGAAATTGAATCTTGTGGCCTTCGGCCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCAAAAACAGCAGAAGAGCTCGAAGAAGCGAATCAACTAGTCGGGTATTCAAGTCAGAGTAGCAATCCTCAAAGAGGTGGTAAGTTTTCCAGGTCTATTGCGGATGATGAGGAAGAAGAAGACGATGAATTAGATTATGGAGATGATGTAATTCATCACACTAACCAAAGAGATGAGAAAATTATTTTAAATGGCATTCATCAACGAAACTTGGAGCAAAATTTGGAGGGGTTATGTGCTAAGATTTGCTAATGTTATATATTACTTCAGTCTTCAGTTTCTTTACTCTCTATTTTGGTATATTGTAATGCAAAAATCACTTAGGTGGAGAAATTTGAGCTGCAGAAAAGCACTTACCATCTATTTTGGTACACAACTGTGGAACATTGATGGGCATTTTTGTTGTAATATATCTATTCATTTTTCTCATACTCTTGAGTCTCTCTATTAGTTCTTGTTTGGTTAGTCCAAATCTCATTTTATTAGAACTGTTGTTATTTGACTCTATAATATTAAATATTAAAGAATAAAATACTCCAACGTGGTTGTACTAGA GATTCAAAACCGATTATCTGCATGAACTCAAAAATATCATCAAACGCCGAAAGGACGAGGACAGCCATTTTTGTTCAAACTAGAGCTTTCTCAGATGCCTCAAACTCTAATTCTGAAGCCTGTTGTTTCAGCGCCTTTACCCAATTGGAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCCGACGAGGCAGAGCAGAAGAAATGGAGGAGATTGATGAATGAAATAGAGGAGACAGGGTCTGCTGTTTCTGTACTTAGAAGCGAAAGGATTAAAAATGAGGCTATTCCGAAGGACTTGGTGCTGGGCACTTTGATTCTTGAATGGCTCCGGACCCAAAGCTGGTGGAACTTTAGTGAAATGGATTTCGTGATGCTTATTACAGCTTATGGCAAGCTAGGGGACTTCAATCGTGCAGAAAAAGTTCTAAACTTGATGAATAAGAAGGGTTATGCCCCAAATGTTGTCTCTCATACTGCTCTCATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCTGGTGGTCCTGAACCTTCTGCACTGACCTATCAAATAATGCTAAAAACTTTTGTTGAGGGATCTAAATTCAAGGAAGCTGAGGAACTCTTTGACTCCCTCTTGAACAAGGAAAAGCCAGTGTTGAAGCCAGACCAAAAGATGTTCCACATGATAATTTACATGTTCAAGAAGGCTGGGAATTATGAAAAGGCTCGCAAAGTATTTGCGGAAATGGCAGCACGTGGAGTTCCACAGACTACAGTTACTTATAATAGTTTGATGTCTTTTGAAACTAACTACAAAGAGGTCTCAAAGATTTATGATCAGATGCAAAGAGCTGGACTTAAGCCAGATGTTGTCAGCTATGCTTTACTCATAAGTGCCTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCGGTTTTTGAGGAAATGCTTGATGCTGGTATCAGACCTACTCACAAAGCTTATAATATTTTGCTCGATGCATTTGCAATCTCTGGACTGGTCGAGCAAGCTAAGACCGTATTCAAGAGTATGAAAAGAGACAGATGCAATCCAGACATTTGCTCTTATACAACCATGTTATCAGCTTATGTTAATGCATCTGACATGGAGGGAGCTGAAACTTTTTTTAGACGACTGAAACAAGATGGTTTTAGACCCAATGTTGTTACTTATGGTACATTGATCAAAGGATACGCCAAAATAAATAATCTTGAAAAGATGATTAAAAGATATGAAGAAATGAAGGTCAATGGTATACGTGTGAATCAAACGATTTTGACGACAATCATGGATGCATATGGAAAGAACAAAGATTTTGATAGTGCTGTTATTTGGTTCAAGGAAATTGAATCTTGTGGCCTTCGGCCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCAAAAACAGCAGAAGAGCTCGAAGAAGCGAATCAACTAGTCGGGTATTCAAGTCAGAGTAGCAATCCTCAAAGAGGTGGTAAGTTTTCCAGGTCTATTGCGGATGATGAGGAAGAAGAAGACGATGAATTAGATTATGGAGATGATGTAATTCATCACACTAACCAAAGAGATGAGAAAATTATTTTAAATGGCATTCATCAACGAAACTTGGAGCAAAATTTGGAGGGGTTATGTGCTAAGATTTGCTAATGTTATATATTACTTCAGTCTTCAGTTTCTTTACTCTCTATTTTGGTATATTGTAATGCAAAAATCACTTAGGTGGAGAAATTTGAGCTGCAGAAAAGCACTTACCATCTATTTTGGTACACAACTGTGGAACATTGATGGGCATTTTTGTTGTAATATATCTATTCATTTTTCTCATACTCTTGAGTCTCTCTATTAGTTCTTGTTTGGTTAGTCCAAATCTCATTTTATTAGAACTGTTGTTATTTGACTCTATAATATTAAATATTAAAGAATAAAATACTCCAACGTGGTTGTACTAGA ATGAACTCAAAAATATCATCAAACGCCGAAAGGACGAGGACAGCCATTTTTGTTCAAACTAGAGCTTTCTCAGATGCCTCAAACTCTAATTCTGAAGCCTGTTGTTTCAGCGCCTTTACCCAATTGGAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCCGACGAGGCAGAGCAGAAGAAATGGAGGAGATTGATGAATGAAATAGAGGAGACAGGGTCTGCTGTTTCTGTACTTAGAAGCGAAAGGATTAAAAATGAGGCTATTCCGAAGGACTTGGTGCTGGGCACTTTGATTCTTGAATGGCTCCGGACCCAAAGCTGGTGGAACTTTAGTGAAATGGATTTCGTGATGCTTATTACAGCTTATGGCAAGCTAGGGGACTTCAATCGTGCAGAAAAAGTTCTAAACTTGATGAATAAGAAGGGTTATGCCCCAAATGTTGTCTCTCATACTGCTCTCATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCTGGTGGTCCTGAACCTTCTGCACTGACCTATCAAATAATGCTAAAAACTTTTGTTGAGGGATCTAAATTCAAGGAAGCTGAGGAACTCTTTGACTCCCTCTTGAACAAGGAAAAGCCAGTGTTGAAGCCAGACCAAAAGATGTTCCACATGATAATTTACATGTTCAAGAAGGCTGGGAATTATGAAAAGGCTCGCAAAGTATTTGCGGAAATGGCAGCACGTGGAGTTCCACAGACTACAGTTACTTATAATAGTTTGATGTCTTTTGAAACTAACTACAAAGAGGTCTCAAAGATTTATGATCAGATGCAAAGAGCTGGACTTAAGCCAGATGTTGTCAGCTATGCTTTACTCATAAGTGCCTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCGGTTTTTGAGGAAATGCTTGATGCTGGTATCAGACCTACTCACAAAGCTTATAATATTTTGCTCGATGCATTTGCAATCTCTGGACTGGTCGAGCAAGCTAAGACCGTATTCAAGAGTATGAAAAGAGACAGATGCAATCCAGACATTTGCTCTTATACAACCATGTTATCAGCTTATGTTAATGCATCTGACATGGAGGGAGCTGAAACTTTTTTTAGACGACTGAAACAAGATGGTTTTAGACCCAATGTTGTTACTTATGGTACATTGATCAAAGGATACGCCAAAATAAATAATCTTGAAAAGATGATTAAAAGATATGAAGAAATGAAGGTCAATGGTATACGTGTGAATCAAACGATTTTGACGACAATCATGGATGCATATGGAAAGAACAAAGATTTTGATAGTGCTGTTATTTGGTTCAAGGAAATTGAATCTTGTGGCCTTCGGCCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCAAAAACAGCAGAAGAGCTCGAAGAAGCGAATCAACTAGTCGGGTATTCAAGTCAGAGTAGCAATCCTCAAAGAGGTGGTAAGTTTTCCAGGTCTATTGCGGATGATGAGGAAGAAGAAGACGATGAATTAGATTATGGAGATGATGTAATTCATCACACTAACCAAAGAGATGAGAAAATTATTTTAAATGGCATTCATCAACGAAACTTGGAGCAAAATTTGGAGGGGTTATGTGCTAAGATTTGCTAA MNSKISSNAERTRTAIFVQTRAFSDASNSNSEACCFSAFTQLEKRKKLEVFKDAADEAEQKKWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSKIYDQMQRAGLKPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGLVEQAKTVFKSMKRDRCNPDICSYTTMLSAYVNASDMEGAETFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFDSAVIWFKEIESCGLRPDQKAKNILLSLAKTAEELEEANQLVGYSSQSSNPQRGGKFSRSIADDEEEEDDELDYGDDVIHHTNQRDEKIILNGIHQRNLEQNLEGLCAKIC
BLAST of MELO3C026387.2 vs. NCBI nr
Match: XP_008464650.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Cucumis melo]) HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111 Identity = 521/560 (93.04%), Postives = 525/560 (93.75%), Query Frame = 0
BLAST of MELO3C026387.2 vs. NCBI nr
Match: XP_004149531.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 [Cucumis sativus] >KGN54957.1 hypothetical protein Csa_4G616760 [Cucumis sativus]) HSP 1 Score: 397.1 bits (1019), Expect = 9.7e-107 Identity = 512/560 (91.43%), Postives = 519/560 (92.68%), Query Frame = 0
BLAST of MELO3C026387.2 vs. NCBI nr
Match: XP_008464651.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X2 [Cucumis melo]) HSP 1 Score: 367.1 bits (941), Expect = 1.1e-97 Identity = 499/556 (89.75%), Postives = 499/556 (89.75%), Query Frame = 0
BLAST of MELO3C026387.2 vs. NCBI nr
Match: XP_022139934.1 (pentatricopeptide repeat-containing protein At3g59040 [Momordica charantia]) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91 Identity = 463/544 (85.11%), Postives = 473/544 (86.95%), Query Frame = 0
BLAST of MELO3C026387.2 vs. NCBI nr
Match: XP_022940074.1 (pentatricopeptide repeat-containing protein At3g59040 [Cucurbita moschata]) HSP 1 Score: 340.5 bits (872), Expect = 1.1e-89 Identity = 456/559 (81.57%), Postives = 474/559 (84.79%), Query Frame = 0
BLAST of MELO3C026387.2 vs. TAIR10
Match: AT3G59040.2 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 221.1 bits (562), Expect = 1.7e-57 Identity = 185/279 (66.31%), Postives = 214/279 (76.70%), Query Frame = 0
BLAST of MELO3C026387.2 vs. Swiss-Prot
Match: sp|Q9LYT2|PP287_ARATH (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX=3702 GN=At3g59040 PE=2 SV=2) HSP 1 Score: 221.1 bits (562), Expect = 3.1e-56 Identity = 185/279 (66.31%), Postives = 214/279 (76.70%), Query Frame = 0
BLAST of MELO3C026387.2 vs. TrEMBL
Match: tr|A0A1S3CNI8|A0A1S3CNI8_CUCME (pentatricopeptide repeat-containing protein At3g59040 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502487 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.5e-111 Identity = 521/560 (93.04%), Postives = 525/560 (93.75%), Query Frame = 0
BLAST of MELO3C026387.2 vs. TrEMBL
Match: tr|A0A0A0L2Y5|A0A0A0L2Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G616760 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 6.4e-107 Identity = 512/560 (91.43%), Postives = 519/560 (92.68%), Query Frame = 0
BLAST of MELO3C026387.2 vs. TrEMBL
Match: tr|A0A1S3CM38|A0A1S3CM38_CUCME (pentatricopeptide repeat-containing protein At3g59040 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502487 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 7.1e-98 Identity = 499/556 (89.75%), Postives = 499/556 (89.75%), Query Frame = 0
BLAST of MELO3C026387.2 vs. TrEMBL
Match: tr|A0A2P5EVW3|A0A2P5EVW3_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_145030 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 6.5e-67 Identity = 204/278 (73.38%), Postives = 229/278 (82.37%), Query Frame = 0
BLAST of MELO3C026387.2 vs. TrEMBL
Match: tr|A0A2P5C5W3|A0A2P5C5W3_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_181120 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66 Identity = 203/278 (73.02%), Postives = 228/278 (82.01%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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