CmoCh01G013820 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh01G013820
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr01 : 10882570 .. 10887480 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGGATAAGATATTAAACAGACCCTCTGCAACTGCGCGCTCTGAGAAAAAAATATCAAACGCCGGAAGGACGAAGGCGGAGCTCCGGTCGCATCATAGCCATTTTTGCCGAAACTAGAGCTTTCTCAGATGCCTCAAGCTCTGATTCTGAAGCCAGTTATATCCGTTCCTCTTCCCAATTGGAGGTTACGCTTAAACCTCTTACTTAAACCCTTTCGCTCGTTATTCATCTTCATACTTGTTCCCATTTTTGTTTGCGAGCGCTTGGTTGTGATTTCTTGTGTTTTTATTTTGTGATGAACTGCAATTATACTCTCTTTTTAATGATTTTCTATCTCAATTCAAGTAGCTAACTCGAAAATTCCTGGCACTGAATGGTATCTTAATTCTGTCTGGTTCTAAAATTTCTATTTGAGAGCTGTTTTATTGATCCTTTTTGTTCTGTGGATTCTTACTATATTGTTGGAGAGCTATTCATTGATATTAGATTGTGGATTTAGGGATTTTTGAAGTTGCGAGTCTTTGAAACGTTGAACGTCTGCTTGATTTCTGAAGGACTAGTTGTACTTTTGGAGAAATGTGGATTTTCTAGGTTCTTTAGGGTTCAATCTGCGCTAGCATGTATTGATTGGCATTGGATATCTATGCTAAGATCTAATTCATTACCAAAAAATGTTAAAAGTGGGGACAAGTATCAGATTGTTAATAGTATGAGCAGAACTAGTGCATCTGTGCAGAGGTCTTTACAAATTTTGAACTAATGTAATGTTTATTCGGTGGTGAAAATGTGCTATGTTGTTTTTATTTCAGTAAATCGCAAGCACGCAGACATTCTATTAGTTCGAATGTTAATGTACGTGGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGGAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCGGACGAGGCAGAGCAGAAGAATTGGAGGAAACTGATGAATGAAATAGAGGAGACAGGCTCTGCTGTTTCTGTGCTGAAAAGTGGAAGGATAAAAAATGAGGCTATTCAGAAGGATTTAGTGTTGGGCACCTTGGTTAGATTTAAACAGCTAAAGAAATGGAACATTGTCAGTGAGGTACAGAGCATAAACATTTGTATGATTTGATATTTACTCTTGTTTCAAAATTTTGTTCTTTATAGGAGGAAATGAAAAATGAATCTCGAAGGGCGAATTGCCTGAAATTAGAATTGAATGAGTATAAAAATGTAGTCTTATGTAAGATAATGCAATGCACCATTTGATGTATAGTCTGCCTCTAAAGTTTGTGAAACAATTTAGATGCTATTTCGAAATCATTAACGTCTTCTAGTTGGAATCAGAAGATGTACTTAAACACTATGTTCGTGTAAGAATTGTTCACAATGCGTGTTTTAACTTCAATATGAATATCAAATAATTTAAGTTAAAAAATGAAGTTCTTGCGTGGTCGTTGTAATGTCCGGATTCTATTCCTAAGTCCTTTGTTTTACAACTTACAAGCTTCAGATGTGCTGATCGTCCAAAATCGTGTTTTTCAACTGTTTTATAGATTCTCGAATGGCTCCGGACCCAGAGCTGGTGGAACTTTAGTGAAATGGATTATTTGATGCTTATTACAGCTTATGGAAAGCTAGGGGAGTTCAATCGTGCAGAAAAAGTTTTAAACTTGATGAATAAGAAGGGTTATGCACCAAACGTGATCTCTCATACTGCTCTTATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCCGGTGGTCCTGAACCTTCTGCATTGACATATCAAATTATGCTAAAAACTTTTGTTGAGGTACTAAGTTTAAACATTATCTTATTTAAAGCCTTTCAACTATATTCCTTCATTTATCGGTCTAATCCTTCAATTCGACCCTCATGAAAATAAAAAATGTTCTTAATTATTGTGAACTTTCAATGTCAAATTTGGGGCGTTTAAGGCTGTATATGTGATTCTGGATATTATGCTCCAATGCAGAATAATTTTGTTGGAACTTGAAACACAAGCTCTCCCTATCAAGATTTTGACCCAAAACTCAAAGCTGATCACAATCTGTATTTTGATTTAATTTATTTTTATTCTTTGGATATAAGTTCCTAACCGAACGAATCAAACACTTTGCAAAATTTTGTTTCAGAAACTCGTTTTCTTCTTTCAAGCCTATGCAATCTTCGAATGTGTGCATTTCTTGGTTTGTTTGTTTTAGTTCACAAAATGACGAGGCATTACTGTAGGGATGTAAATTCAAGGAAGCTGAAGAACTCTTTGACTCCCTCTTGAACAAGGAAGGGCAAGTATTGAAGCCAGACCAAAAGATGTTCCACATGATGATTTATATGTTCAAGAAGGCTGGGAATTACGAAAAGGCTCGTAAATTATTTTCTGAAATGGCAGCACGAGGAGTTCCACAATCTACAATTACTTATAATAGTTTGATGTCGTTTGAAACCAACTACAAGGAGGTCTCGAGGATTTATGATCAGGTAAACCTATATGGGTTGGTCTTTACTAGACATTGTTTTCACATGGGTGAAAGTTCTAGGAATTTCAGATGTAGGATACTGTCACTGAATAATTTTCTCTTATGAACGGGGCTGTTTAGGTTTTCGATTGAGCAGCACTTTTCCTGAGCCACTGATTTTAAGACCATATGCTGATTTCTGTCTAGTTTATGTGATTTTAATGCTCTGGATATGAAAGTCTTATTGGGTTCTTTCCATTGTAGTTTTAATCTTTTAAGACAATAACCATGTGAACATTCAATTGGCAAGTGTGTAACTGTCACATTTTCTGGGTTGTGTGAATTGAAGACCGATTGAACGATGTAGCAAATATTGGTATGATCGAGATGTTAGGGAAACGAAATCTTGAATATTTGGTAACTTCCATTGCATCACAAGAATATTAGCGGCTGTGTTGTAGTTAAAATTTTGGGAGGTTATGCTTTTGCTTCAGTGGCCAATGTTGTCAGCCAATTTAATAGTTTAATCTTTTGTTCATCTCCTATTCCTTCTTAACGAGATTGATCAAATTTGAATTCAAATTCTCATCTGTAGATGCAAAGAGCTGGACTCCAACCAGATGTTGTCAGCTATGCTTTACTCATTGGTGCTTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCAGTTTTTGAGGAAATGCTTGATGCTGGTGTCAGGTACTTCCCTTCGGCACTTTCTTCTTTTAACTACCGCATATAGTATCTGGTTGGAAATCAATATTCTCCCATAATATGGGTTTCATTTTTCTATTTTGCTTCAAATTCACTTGACACGGCATCGGGCTGTAACAACCCAATCCCATCGCTAGCAGATATTGTTCTCTTTAGGTTTTCCCTTTCGGGCTTCCCCTCAAGATCTTTAAAACGCGTCAACTAGGGAGAGGTTTCCACACCTTTATAAATAATGCTTCATTCTCCTTCCCTACAACCCTCGATAGATAGCGAGATCCCGCATCGATTAGAGAAGGAGACGAGTGCCAACGACGACGCTAGGTCCTAAAGGGGGGTGGATTGTGAGATCCCATATCGGTTGGGGAGGAGAATGAAGCATTCTTTATTAGAGTGTGGAAATCTCTCTTTAGCAAACACGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGAAAAATCCAAAAAGGACAATATCTACTAGCGGTGGACTTGAGCTATTACACGGGCATTGCTAATGATGAATAGTAAACCAAAATAGTTGTGCACTGATAAAACATTTCTGCCTGGCGTTTTTCAGACCAACTCGCAAAGCTTATAATATTTTGCTTGATGCATTTGCAATCTCTGGGATGGTCGAGCAAGCTAAGATTGTGTTCAAGAGTATGAGAAGAGACAGGTACTATTATCTGCCTAATGATTGCATTTAGTGATTCAATATCCTCTTTTAGTGTAGTATTGATTGAAGTTTATGTAGTGTGGTTCCAATTCCTTAGTTCTTTTGGCATGCATTTCTTGAGCTTTTGGTAATAGATTGGCATCATCATTTGTTTGATACAGATGCAGTCCAGATATATGCTCATATACAACCATGTTATCAGCTTATGTTAATGCATCTGACATGGAAGGAGCCGAAATTTTTTTCAGACAACTGAAACAGGACGGTTTTCGACCCAATGTCGTTACTTATGGTACATTGATCAAAGGGTATGCTAAAATAAATAATCTTGACAAGATGCTTAAAAAATATGAAGAAATGAAGCTCAATGGAATAAGAGTGAATCAGATGATTTTGACGACGATCATGGATGCATTTGGAAAAAACAAGGATTTTGGCAGTGCTGTTATTTGGTTCAAGGAAATTGAATCGTGTGGCGTTCGACCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCGAACACAGCCGAAGAGCTCGATGAAGCTAATCAACTCGTAGGATATCCAAATCAAAGTAGCGATGCAGAAAGAGCAGGTAAGTTTTCTAGGTCTATGGAGGACGAGGACGAGGAAGACAATGAATTGGATTATGCTGATGATGTAATTCATCACAATAACCAAAGAGATGAGAAAATTATTTTGAATGGCATTCACCAACAAAACTTGGAGGGTTTATGTGCTAAGATCTGTTAATGTTATATATTTGTTTACTCTATGTTGGTATATTGTAATACAAAATTCACTTAGCTGGAGAAATCTAAGTCCTTTCTCAAATCACAACCTAGCTGGTATACAACTGTGGAACTTTGATGCCCATTTTTGTTATATTTTCATTCATTTCTCGAGTCTACATTTCATTTTATCTAGTTCTTACATGTATATAATATTTCAGATTTTACGGGTC

mRNA sequence

AAATGGATAAGATATTAAACAGACCCTCTGCAACTGCGCGCTCTGAGAAAAAAATATCAAACGCCGGAAGGACGAAGGCGGAGCTCCGGTCGCATCATAGCCATTTTTGCCGAAACTAGAGCTTTCTCAGATGCCTCAAGCTCTGATTCTGAAGCCAGTTATATCCGTTCCTCTTCCCAATTGGAGTAAATCGCAAGCACGCAGACATTCTATTAGTTCGAATGTTAATGTACGTGGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGGAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCGGACGAGGCAGAGCAGAAGAATTGGAGGAAACTGATGAATGAAATAGAGGAGACAGGCTCTGCTGTTTCTGTGCTGAAAAGTGGAAGGATAAAAAATGAGGCTATTCAGAAGGATTTAGTGTTGGGCACCTTGGTTAGATTTAAACAGCTAAAGAAATGGAACATTGTCAGTGAGATTCTCGAATGGCTCCGGACCCAGAGCTGGTGGAACTTTAGTGAAATGGATTATTTGATGCTTATTACAGCTTATGGAAAGCTAGGGGAGTTCAATCGTGCAGAAAAAGTTTTAAACTTGATGAATAAGAAGGGTTATGCACCAAACGTGATCTCTCATACTGCTCTTATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCCGGTGGTCCTGAACCTTCTGCATTGACATATCAAATTATGCTAAAAACTTTTGTTGAGGGATGTAAATTCAAGGAAGCTGAAGAACTCTTTGACTCCCTCTTGAACAAGGAAGGGCAAGTATTGAAGCCAGACCAAAAGATGTTCCACATGATGATTTATATGTTCAAGAAGGCTGGGAATTACGAAAAGGCTCGTAAATTATTTTCTGAAATGGCAGCACGAGGAGTTCCACAATCTACAATTACTTATAATAGTTTGATGTCGTTTGAAACCAACTACAAGGAGGTCTCGAGGATTTATGATCAGATGCAAAGAGCTGGACTCCAACCAGATGTTGTCAGCTATGCTTTACTCATTGGTGCTTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCAGTTTTTGAGGAAATGCTTGATGCTGGTGTCAGACCAACTCGCAAAGCTTATAATATTTTGCTTGATGCATTTGCAATCTCTGGGATGGTCGAGCAAGCTAAGATTGTGTTCAAGAGTATGAGAAGAGACAGATGCAGTCCAGATATATGCTCATATACAACCATGTTATCAGCTTATGTTAATGCATCTGACATGGAAGGAGCCGAAATTTTTTTCAGACAACTGAAACAGGACGGTTTTCGACCCAATGTCGTTACTTATGGTACATTGATCAAAGGGTATGCTAAAATAAATAATCTTGACAAGATGCTTAAAAAATATGAAGAAATGAAGCTCAATGGAATAAGAGTGAATCAGATGATTTTGACGACGATCATGGATGCATTTGGAAAAAACAAGGATTTTGGCAGTGCTGTTATTTGGTTCAAGGAAATTGAATCGTGTGGCGTTCGACCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCGAACACAGCCGAAGAGCTCGATGAAGCTAATCAACTCGTAGGATATCCAAATCAAAGTAGCGATGCAGAAAGAGCAGGTAAGTTTTCTAGGTCTATGGAGGACGAGGACGAGGAAGACAATGAATTGGATTATGCTGATGATGTAATTCATCACAATAACCAAAGAGATGAGAAAATTATTTTGAATGGCATTCACCAACAAAACTTGGAGGGTTTATGTGCTAAGATCTGTTAATGTTATATATTTGTTTACTCTATGTTGGTATATTGTAATACAAAATTCACTTAGCTGGAGAAATCTAAGTCCTTTCTCAAATCACAACCTAGCTGGTATACAACTGTGGAACTTTGATGCCCATTTTTGTTATATTTTCATTCATTTCTCGAGTCTACATTTCATTTTATCTAGTTCTTACATGTATATAATATTTCAGATTTTACGGGTC

Coding sequence (CDS)

ATGCCTCAAGCTCTGATTCTGAAGCCAGTTATATCCGTTCCTCTTCCCAATTGGAGTAAATCGCAAGCACGCAGACATTCTATTAGTTCGAATGTTAATGTACGTGGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGGAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCGGACGAGGCAGAGCAGAAGAATTGGAGGAAACTGATGAATGAAATAGAGGAGACAGGCTCTGCTGTTTCTGTGCTGAAAAGTGGAAGGATAAAAAATGAGGCTATTCAGAAGGATTTAGTGTTGGGCACCTTGGTTAGATTTAAACAGCTAAAGAAATGGAACATTGTCAGTGAGATTCTCGAATGGCTCCGGACCCAGAGCTGGTGGAACTTTAGTGAAATGGATTATTTGATGCTTATTACAGCTTATGGAAAGCTAGGGGAGTTCAATCGTGCAGAAAAAGTTTTAAACTTGATGAATAAGAAGGGTTATGCACCAAACGTGATCTCTCATACTGCTCTTATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCCGGTGGTCCTGAACCTTCTGCATTGACATATCAAATTATGCTAAAAACTTTTGTTGAGGGATGTAAATTCAAGGAAGCTGAAGAACTCTTTGACTCCCTCTTGAACAAGGAAGGGCAAGTATTGAAGCCAGACCAAAAGATGTTCCACATGATGATTTATATGTTCAAGAAGGCTGGGAATTACGAAAAGGCTCGTAAATTATTTTCTGAAATGGCAGCACGAGGAGTTCCACAATCTACAATTACTTATAATAGTTTGATGTCGTTTGAAACCAACTACAAGGAGGTCTCGAGGATTTATGATCAGATGCAAAGAGCTGGACTCCAACCAGATGTTGTCAGCTATGCTTTACTCATTGGTGCTTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCAGTTTTTGAGGAAATGCTTGATGCTGGTGTCAGACCAACTCGCAAAGCTTATAATATTTTGCTTGATGCATTTGCAATCTCTGGGATGGTCGAGCAAGCTAAGATTGTGTTCAAGAGTATGAGAAGAGACAGATGCAGTCCAGATATATGCTCATATACAACCATGTTATCAGCTTATGTTAATGCATCTGACATGGAAGGAGCCGAAATTTTTTTCAGACAACTGAAACAGGACGGTTTTCGACCCAATGTCGTTACTTATGGTACATTGATCAAAGGGTATGCTAAAATAAATAATCTTGACAAGATGCTTAAAAAATATGAAGAAATGAAGCTCAATGGAATAAGAGTGAATCAGATGATTTTGACGACGATCATGGATGCATTTGGAAAAAACAAGGATTTTGGCAGTGCTGTTATTTGGTTCAAGGAAATTGAATCGTGTGGCGTTCGACCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCGAACACAGCCGAAGAGCTCGATGAAGCTAATCAACTCGTAGGATATCCAAATCAAAGTAGCGATGCAGAAAGAGCAGGTAAGTTTTCTAGGTCTATGGAGGACGAGGACGAGGAAGACAATGAATTGGATTATGCTGATGATGTAATTCATCACAATAACCAAAGAGATGAGAAAATTATTTTGAATGGCATTCACCAACAAAACTTGGAGGGTTTATGTGCTAAGATCTGTTAA
Homology
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BLAST of CmoCh01G013820 vs. Swiss-Prot
Match: PP287_ARATH (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2)

HSP 1 Score: 758.1 bits (1956), Expect = 7.2e-218
Identity = 389/583 (66.72%), Postives = 477/583 (81.82%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           M QA+I KP +SVP  N S+ + + + I+  V ++ R  V CMGML PRKFLQKR+K+EV
Sbjct: 1   MSQAVIFKPFVSVPSSNHSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIK-NEAIQKDLVLGTLVRFKQLKKWN 120
           FKDAADE +QK WR LM EIE TGSAV VL+  +   ++ + +DLVLGTLVRFKQLKKWN
Sbjct: 61  FKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWN 120

Query: 121 IVSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTAL 180
           +VSEILEWLR Q+WWNFSE+D+LMLITAYGKLG FN AE+VL++++K G  PNVIS+TAL
Sbjct: 121 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTAL 180

Query: 181 MEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEG 240
           ME+YGRGG+ NNAEAIFRRMQS GPEPSA+TYQI+LKTFVEG KFKEAEE+F++LL+++ 
Sbjct: 181 MESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKK 240

Query: 241 QVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSR 300
             LKPDQKM+HMMIYM+KKAGNYEKARK+FS M  +GVPQST+TYNSLMSFET+YKEVS+
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 300

Query: 301 IYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA 360
           IYDQMQR+ +QPDVVSYALLI AYG+ARREEEAL+VFEEMLDAGVRPT KAYNILLDAFA
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360

Query: 361 ISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVV 420
           ISGMVEQAK VFKSMRRDR  PD+ SYTTMLSAYVNASDMEGAE FF+++K DGF PN+V
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420

Query: 421 TYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEI 480
           TYGTLIKGYAK N+++KM++ YE+M+L+GI+ NQ ILTTIMDA G+ K+FGSA+ W+KE+
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480

Query: 481 ESCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQS---------SDAERAGK---FS 540
           ESCGV PDQKAKN+LLSLA+T +EL+EA +L G  N++         SD +  G     S
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGSDDDEEGVEDISS 540

Query: 541 RSMEDEDEEDNELDYADDVIHHNNQRDEKIILNGIHQQNLEGL 571
            S +DEDE D++ D A + + ++  ++  +    +  + L GL
Sbjct: 541 ESSDDEDEGDDDDDDARETVLYDKPQEGSLGYGSLQTEELVGL 583

[Close]
BLAST of CmoCh01G013820 vs. Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.7e-41
Identity = 103/368 (27.99%), Postives = 188/368 (51.09%), Query Frame = 1 

Query: 144 LITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFRRMQSGG 203
           +I+  G+ G+   A+++       GY   V + +AL+ AYGR G +  A ++F  M+  G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 204 PEPSALTYQIMLKTFVEG-CKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFKKAGNY 263
             P+ +TY  ++    +G  +FK+  + FD +  + G  ++PD+  F+ ++ +  + G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNG--VQPDRITFNSLLAVCSRGGLW 358

Query: 264 EKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYD---QMQRAGLQPDVVSYALL 323
           E AR LF EM  R + Q   +YN+L+       ++   ++   QM    + P+VVSY+ +
Sbjct: 359 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 418

Query: 324 IGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSMRRDRC 383
           I  + KA R +EAL +F EM   G+   R +YN LL  +   G  E+A  + + M     
Sbjct: 419 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 478

Query: 384 SPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNLDKMLK 443
             D+ +Y  +L  Y      +  +  F ++K++   PN++TY TLI GY+K     + ++
Sbjct: 479 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 538

Query: 444 KYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNILLSLAN 503
            + E K  G+R + ++ + ++DA  KN   GSAV    E+   G+ P+    N ++    
Sbjct: 539 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 598

Query: 504 TAEELDEA 508
            +  +D +
Sbjct: 599 RSATMDRS 603

[Close]
BLAST of CmoCh01G013820 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.7e-41
Identity = 100/388 (25.77%), Postives = 191/388 (49.23%), Query Frame = 1 

Query: 116 KKWNIVSEILEWLRTQSWWNFSEMD---YLMLITAYGKLGEFNRAEKVLNLMNKKGYAPN 175
           KK+++     +W   Q  +  S +D     ++I+  GK G  + A  + N + + G++ +
Sbjct: 149 KKFDLALRAFDWFMKQKDYQ-SMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 208

Query: 176 VISHTALMEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVE-GCKFKEAEELF 235
           V S+T+L+ A+   GRY  A  +F++M+  G +P+ +TY ++L  F + G  + +   L 
Sbjct: 209 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 268

Query: 236 DSLLNKEGQVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSF- 295
           + +   +   + PD   ++ +I   K+   +++A ++F EM A G     +TYN+L+   
Sbjct: 269 EKM---KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 328

Query: 296 --ETNYKEVSRIYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTR 355
                 KE  ++ ++M   G  P +V+Y  LI AY +    +EA+ +  +M + G +P  
Sbjct: 329 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 388

Query: 356 KAYNILLDAFAISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQ 415
             Y  LL  F  +G VE A  +F+ MR   C P+IC++   +  Y N          F +
Sbjct: 389 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 448

Query: 416 LKQDGFRPNVVTYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKD 475
           +   G  P++VT+ TL+  + +     ++   ++EMK  G    +    T++ A+ +   
Sbjct: 449 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 508

Query: 476 FGSAVIWFKEIESCGVRPDQKAKNILLS 497
           F  A+  ++ +   GV PD    N +L+
Sbjct: 509 FEQAMTVYRRMLDAGVTPDLSTYNTVLA 532

[Close]
BLAST of CmoCh01G013820 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.0e-39
Identity = 114/437 (26.09%), Postives = 210/437 (48.05%), Query Frame = 1 

Query: 80  IEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKW--NIVSEILEWLRTQSWWNFS 139
           I++  S V + ++       +  + VL   +R K+   +  N+  E+LE     S  + +
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE-----SQVSPN 209

Query: 140 EMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFR 199
              Y +LI  +   G  + A  + + M  KG  PNV+++  L++ Y +  + ++   + R
Sbjct: 210 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 269

Query: 200 RMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFK 259
            M   G EP+ ++Y +++       + KE   +   + N+ G  L  D+  ++ +I  + 
Sbjct: 270 SMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGYSL--DEVTYNTLIKGYC 329

Query: 260 KAGNYEKARKLFSEMAARGVPQSTITYNSL---MSFETNYKEVSRIYDQMQRAGLQPDVV 319
           K GN+ +A  + +EM   G+  S ITY SL   M    N        DQM+  GL P+  
Sbjct: 330 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 389

Query: 320 SYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSM 379
           +Y  L+  + +     EA  V  EM D G  P+   YN L++   ++G +E A  V + M
Sbjct: 390 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 449

Query: 380 RRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNL 439
           +    SPD+ SY+T+LS +  + D++ A    R++ + G +P+ +TY +LI+G+ +    
Sbjct: 450 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 509

Query: 440 DKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNIL 499
            +    YEEM   G+  ++   T +++A+    D   A+    E+   GV PD    ++L
Sbjct: 510 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 569

Query: 500 LSLANTAEELDEANQLV 512
           ++  N      EA +L+
Sbjct: 570 INGLNKQSRTREAKRLL 578

[Close]
BLAST of CmoCh01G013820 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-37
Identity = 102/362 (28.18%), Postives = 181/362 (50.00%), Query Frame = 1 

Query: 141 YLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFRRMQ 200
           Y  +I A  K    ++A +VLN M K G  P+ +++ +++  Y   G+   A    ++M+
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMR 293

Query: 201 SGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFKKAG 260
           S G EP  +TY +++    +  +  EA ++FDS+  K G  LKP+   +  ++  +   G
Sbjct: 294 SDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM-TKRG--LKPEITTYGTLLQGYATKG 353

Query: 261 NYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSR---IYDQMQRAGLQPDVVSYA 320
              +   L   M   G+      ++ L+       +V +   ++ +M++ GL P+ V+Y 
Sbjct: 354 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 413

Query: 321 LLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSMRRD 380
            +IG   K+ R E+A+  FE+M+D G+ P    YN L+         E+A+ +   M  D
Sbjct: 414 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML-D 473

Query: 381 RCSPDICSYTTMLSAYVNASDMEG----AEIFFRQLKQDGFRPNVVTYGTLIKGYAKINN 440
           R    IC  T   ++ +++   EG    +E  F  + + G +PNV+TY TLI GY     
Sbjct: 474 R---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 533

Query: 441 LDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNI 496
           +D+ +K    M   G++ N +  +T+++ + K      A++ FKE+ES GV PD    NI
Sbjct: 534 MDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNI 588

[Close]
BLAST of CmoCh01G013820 vs. TrEMBL
Match: A0A0A0L2Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G616760 PE=4 SV=1)

HSP 1 Score: 1024.2 bits (2647), Expect = 6.0e-296
Identity = 519/580 (89.48%), Postives = 551/580 (95.00%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ LILKPV+S PLPNWSK QA+ HSISSNVNVR +LVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQTLILKPVVSAPLPNWSKLQAQTHSISSNVNVRRKLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKD ADEAEQKNWR+LMNEIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDEADEAEQKNWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VSEILEWLRTQSWWNFSEMD++MLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+SHTALM
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYGRG RYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEG KFKEAEELFDSLLNKE  
Sbjct: 181 EAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKP 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHM+IYMFKKAGNYEKARK+F+EMAARGVPQ+T+TYNSLMSFETNYKEVS+I
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           YDQMQRAGLQPDVVSYALLI AYGKARREEEALAVFEEMLDAG+RPT KAYNILLDAFAI
Sbjct: 301 YDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAI 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SGMVEQAKIVFKSM+RDRCSPDICSYTTMLSAYVNASDMEGAE FFR+LKQDGFRPNVVT
Sbjct: 361 SGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAKINNL+KM+K+YEEMK+NGIRVNQ ILTTIMDA+GKNKDFGSAVIWF EIE
Sbjct: 421 YGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIE 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSM-EDEDEEDNE 540
           SCG+RPDQKAKNILLSLA TAEELDEANQLVGY +QSS  +R GKFSRS+ +DE+EE++E
Sbjct: 481 SCGLRPDQKAKNILLSLAKTAEELDEANQLVGYSSQSSSPQRGGKFSRSIADDEEEEEDE 540

Query: 541 LDYADDVIHHNNQRDEKIILNGIHQ----QNLEGLCAKIC 576
           LDYADDVI H NQRDEKIILNGIHQ    QNLEGLCAKIC
Sbjct: 541 LDYADDVIPHTNQRDEKIILNGIHQQNLEQNLEGLCAKIC 580

[Close]
BLAST of CmoCh01G013820 vs. TrEMBL
Match: M5WWZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002772mg PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 1.7e-234
Identity = 419/569 (73.64%), Postives = 486/569 (85.41%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP IS PL NWSK +A  +SI +NV VRGR+ V CMGML PRKFLQKRKK+EV
Sbjct: 1   MPQTLFLKPFISAPLDNWSKLKACTNSIGANVKVRGRVGVVCMGMLAPRKFLQKRKKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQKNWR+LMNEIEETGSAVSVLKS R+K+  I KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDAADEAEQKNWRRLMNEIEETGSAVSVLKSERLKDRTIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VS+ILEWL+TQ+WW+FS+MD+LMLITAYGK G FN AEKVL+LMN+KG  P+VISHTALM
Sbjct: 121 VSQILEWLQTQNWWDFSKMDFLMLITAYGKQGHFNGAEKVLSLMNEKGIPPSVISHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYG+GGRYNNAEAIFRRMQS GPEPSA+TYQI+LK FVEGCKFKEAEE+F++LL++   
Sbjct: 181 EAYGKGGRYNNAEAIFRRMQSSGPEPSAVTYQIILKIFVEGCKFKEAEEIFETLLDEGKS 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
            LKPDQKMFHMMIYM+KK G+Y+KARK+F+ MA RGV QST+TYNSLMSFETNYKEVS++
Sbjct: 241 PLKPDQKMFHMMIYMYKKVGSYDKARKMFALMAERGVQQSTVTYNSLMSFETNYKEVSKM 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           Y+QMQRAGL+PDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPT KAYNILLDAFA+
Sbjct: 301 YNQMQRAGLRPDVVSYALLISAYGKARREEEALAVFEEMLDAGVRPTSKAYNILLDAFAV 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SGMV+QA+ VFKSMRRDR  PD+CSYTTMLSAYVNASDMEGAE FF ++KQD  +PN+VT
Sbjct: 361 SGMVDQARTVFKSMRRDRYKPDLCSYTTMLSAYVNASDMEGAEKFFLRIKQDALKPNIVT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAK NN++KM++KYEEM+  G++ NQ ILTTIMDA+GKN+DFGSAV+W+KE+E
Sbjct: 421 YGTLIKGYAKTNNIEKMMEKYEEMQAAGVKPNQTILTTIMDAYGKNRDFGSAVVWYKEME 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSMEDEDEEDNEL 540
           +C + PDQKAKNILLSLA TAEE   ANQ+VG  +Q S+ +   KF   +++ D ED + 
Sbjct: 481 TCRLPPDQKAKNILLSLAKTAEEQKVANQVVGNLDQCSNEQGGTKFLVPVDENDSEDEDE 540

Query: 541 DYADDVIHHNNQRDEKIILNGIHQQNLEG 570
           D  DD    NN  DE   L+G  Q    G
Sbjct: 541 D--DD----NNHDDE---LDGPSQLRYSG 560

[Close]
BLAST of CmoCh01G013820 vs. TrEMBL
Match: A0A067FJR1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007543mg PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 1.0e-231
Identity = 414/591 (70.05%), Postives = 485/591 (82.06%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP IS    N+S+       + +N  V  R+ V CMGML PRKF+QKR+K+EV
Sbjct: 1   MPQTLFLKPFISPSSINFSQQNVPVSPLDANFKVHRRVGVICMGMLAPRKFMQKRRKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEA +KNWR+LMN+IEE GSAV+VL+S R + + + KDLVLGTLVR KQLKKWN+
Sbjct: 61  FKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNV 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VSE+LEWLR QSWW+F+EMD+LMLITAYGK G+FN+AEKVL+ MNKKGYAP+V+SHTALM
Sbjct: 121 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYGRGGRY NAEAIFRRMQS GP PSALTYQI+LK FVE  KFKEAEE+F +LL++E  
Sbjct: 181 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
            LKPDQKMFHMMIYM+KKAG YEKARKLF+ MA RGV QST+TYNSLMSFETNYKEVS+I
Sbjct: 241 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           YDQMQRAGLQPDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPT KAYNILLDAFAI
Sbjct: 301 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SGMV+QA+ VFK MRRDRCSPDICSYTTMLSAYVNASDMEGAE FFR+LKQDGF PNV+T
Sbjct: 361 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAK+NNL+KM++ Y++M++NGI+ NQ I TTIMDA+GKNKDF SAV+W+KE+E
Sbjct: 421 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSMEDEDEEDNEL 540
           SCG  PDQKAKNILLSLA TA+E +EAN+L+G  N  ++       S S+++ED++D++ 
Sbjct: 481 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 540

Query: 541 DYADDVIHH---------------------NNQRDEKIILNGIHQQNLEGL 571
           +  DD I+H                     + + DE I  NG HQ++ EGL
Sbjct: 541 EDDDDNIYHDGDGDGDGDDNEDDAEETIACSGKEDELIFFNGDHQRSQEGL 591

[Close]
BLAST of CmoCh01G013820 vs. TrEMBL
Match: V4TI43_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014674mg PE=4 SV=1)

HSP 1 Score: 808.9 bits (2088), Expect = 3.9e-231
Identity = 413/589 (70.12%), Postives = 484/589 (82.17%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP IS    N+S+       + +N  V  R+ V CMGML PRKF+QKR+K+EV
Sbjct: 1   MPQTLFLKPFISPSSINFSQQNVPVSPLDANFKVHRRVGVICMGMLAPRKFMQKRRKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEA +KNWR+LMN+IEE GSAV+VL+S R + + + KDLVLGTLVR KQLKKWN+
Sbjct: 61  FKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNV 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VSE+LEWLR QSWW+F+EMD+LMLITAYGK G+FN+AEKVL+ MNKKGYAP+V+SHTALM
Sbjct: 121 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYGRGGRY NAEAIFRRMQS GP PSALTYQI+LK FVE  KFKEAEE+F +LL++E  
Sbjct: 181 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
            LKPDQKMFHMMIYM+KKAG YEKARKLF+ MA RGV QST+TYNSLMSFETNYKEVS+I
Sbjct: 241 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           YDQMQRAGLQPDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPT KAYNILLDAFAI
Sbjct: 301 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SGMV+QA+ VFK MRRDRCSPDICSYTTMLSAYVNASDMEGAE FFR+LKQDGF PNV+T
Sbjct: 361 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAK+NNL+KM++ Y++M++NGI+ NQ I TTIMDA+GKNKDF SAV+W+KE+E
Sbjct: 421 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSMEDEDEEDNE- 540
           SCG  PDQKAKNILLSLA TA+E +EAN+L+G  N  ++       S S+++ED++D++ 
Sbjct: 481 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSMSVDEEDDDDDDD 540

Query: 541 ------------------LDYADDVIHHNNQRDEKIILNGIHQQNLEGL 571
                              D A++ I  + + DE I  NG HQ++ EGL
Sbjct: 541 NDEDGDDNIYRDGDGDDNEDDAEETIACSGKEDELIFFNGDHQRSQEGL 589

[Close]
BLAST of CmoCh01G013820 vs. TrEMBL
Match: A0A067KNM9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06728 PE=4 SV=1)

HSP 1 Score: 787.3 bits (2032), Expect = 1.2e-224
Identity = 408/586 (69.62%), Postives = 481/586 (82.08%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNV---------RGRLVVTCMGMLTPRKF 60
           M  AL  +P IS P  NWS  +   + +++   +         RGRL V   GML+ RKF
Sbjct: 1   MAPALYFRPCISPPSTNWSHPKMLVNPLNAIPKIYGGGGGGGGRGRLEVVAKGMLSQRKF 60

Query: 61  LQKRKKLEVFKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRI-KNEAIQKDLVLGTLV 120
           +QKR+K+EVFKDAADEA+QKNWR +M +IEETGSAV+VLKS RI +N+ + KDLVLGTLV
Sbjct: 61  MQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQNQDLPKDLVLGTLV 120

Query: 121 RFKQLKKWNIVSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYA 180
           RF+QLKKWN+VSEILEWLRTQ WW+FSEMD + LITA+GK G FN AEK+L  MNK GYA
Sbjct: 121 RFQQLKKWNLVSEILEWLRTQHWWDFSEMDSIRLITAHGKQGNFNEAEKILTYMNKMGYA 180

Query: 181 PNVISHTALMEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEEL 240
           PNV+SHTALMEAYGRGGRYNNAEAIFRRMQ+ GPEPSALTYQI+LKTFVEG KFKEAEE+
Sbjct: 181 PNVVSHTALMEAYGRGGRYNNAEAIFRRMQTLGPEPSALTYQIILKTFVEGNKFKEAEEV 240

Query: 241 FDSLLNKEGQVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSF 300
           F+ LL+ E   LKPDQKMFHMMIYM++KAGNYEKARK+FS M  R +P ST+TYNSLMSF
Sbjct: 241 FEPLLSDERAPLKPDQKMFHMMIYMYRKAGNYEKARKMFSLMTQREIPHSTVTYNSLMSF 300

Query: 301 ETNYKEVSRIYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKA 360
           ETNYKEVS+IYDQMQR+GLQPDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPT KA
Sbjct: 301 ETNYKEVSKIYDQMQRSGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 360

Query: 361 YNILLDAFAISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLK 420
           YNILLDAFAISGMVEQA+IVFKSMRRDRC+P++CSYTTMLSAY NASDMEGAE FF +LK
Sbjct: 361 YNILLDAFAISGMVEQARIVFKSMRRDRCTPNLCSYTTMLSAYANASDMEGAEKFFTRLK 420

Query: 421 QDGFRPNVVTYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFG 480
           +DGF PNVVTYGTLIKGYAKI +L+ M+KKYEEM+L+G++ NQ I TTIMDA GKNKDFG
Sbjct: 421 RDGFEPNVVTYGTLIKGYAKIKDLENMMKKYEEMQLSGVKANQTIFTTIMDAHGKNKDFG 480

Query: 481 SAVIWFKEIESCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSM 540
           SAV W+KE+E  GV PDQKAKN+LLSLA TA+E +EANQLVGY +  +     G+++   
Sbjct: 481 SAVSWYKEMERHGVPPDQKAKNVLLSLAKTADEKEEANQLVGYSDNGASRFVNGEYADDD 540

Query: 541 EDEDEE-----DN-ELDYADDVIHHNNQRDEKIILNGIHQQNLEGL 571
           +D+D++     DN ELD  +D  +++ +++E I      QQ++EGL
Sbjct: 541 DDDDDDSDNEVDNYELDDEEDANYYDEEQEELIDFTSDDQQSVEGL 586

[Close]
BLAST of CmoCh01G013820 vs. TAIR10
Match: AT3G59040.2 (AT3G59040.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 740.3 bits (1910), Expect = 8.7e-214
Identity = 379/565 (67.08%), Postives = 465/565 (82.30%), Query Frame = 1 

Query: 19  SKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEVFKDAADEAEQKNWRKLMN 78
           S+ + + + I+  V ++ R  V CMGML PRKFLQKR+K+EVFKDAADE +QK WR LM 
Sbjct: 26  SQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLML 85

Query: 79  EIEETGSAVSVLKSGRIK-NEAIQKDLVLGTLVRFKQLKKWNIVSEILEWLRTQSWWNFS 138
           EIE TGSAV VL+  +   ++ + +DLVLGTLVRFKQLKKWN+VSEILEWLR Q+WWNFS
Sbjct: 86  EIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFS 145

Query: 139 EMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFR 198
           E+D+LMLITAYGKLG FN AE+VL++++K G  PNVIS+TALME+YGRGG+ NNAEAIFR
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFR 205

Query: 199 RMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFK 258
           RMQS GPEPSA+TYQI+LKTFVEG KFKEAEE+F++LL+++   LKPDQKM+HMMIYM+K
Sbjct: 206 RMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYK 265

Query: 259 KAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYDQMQRAGLQPDVVSYA 318
           KAGNYEKARK+FS M  +GVPQST+TYNSLMSFET+YKEVS+IYDQMQR+ +QPDVVSYA
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325

Query: 319 LLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSMRRD 378
           LLI AYG+ARREEEAL+VFEEMLDAGVRPT KAYNILLDAFAISGMVEQAK VFKSMRRD
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385

Query: 379 RCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNLDKM 438
           R  PD+ SYTTMLSAYVNASDMEGAE FF+++K DGF PN+VTYGTLIKGYAK N+++KM
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445

Query: 439 LKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNILLSL 498
           ++ YE+M+L+GI+ NQ ILTTIMDA G+ K+FGSA+ W+KE+ESCGV PDQKAKN+LLSL
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSL 505

Query: 499 ANTAEELDEANQLVGYPNQS---------SDAERAGK---FSRSMEDEDEEDNELDYADD 558
           A+T +EL+EA +L G  N++         SD +  G     S S +DEDE D++ D A +
Sbjct: 506 ASTQDELEEAKELTGIRNETATIIARVYGSDDDEEGVEDISSESSDDEDEGDDDDDDARE 565

Query: 559 VIHHNNQRDEKIILNGIHQQNLEGL 571
            + ++  ++  +    +  + L GL
Sbjct: 566 TVLYDKPQEGSLGYGSLQTEELVGL 590

[Close]
BLAST of CmoCh01G013820 vs. TAIR10
Match: AT2G31400.1 (AT2G31400.1 genomes uncoupled 1)

HSP 1 Score: 172.2 bits (435), Expect = 9.5e-43
Identity = 103/368 (27.99%), Postives = 188/368 (51.09%), Query Frame = 1 

Query: 144 LITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFRRMQSGG 203
           +I+  G+ G+   A+++       GY   V + +AL+ AYGR G +  A ++F  M+  G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298

Query: 204 PEPSALTYQIMLKTFVEG-CKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFKKAGNY 263
             P+ +TY  ++    +G  +FK+  + FD +  + G  ++PD+  F+ ++ +  + G +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNG--VQPDRITFNSLLAVCSRGGLW 358

Query: 264 EKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYD---QMQRAGLQPDVVSYALL 323
           E AR LF EM  R + Q   +YN+L+       ++   ++   QM    + P+VVSY+ +
Sbjct: 359 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 418

Query: 324 IGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSMRRDRC 383
           I  + KA R +EAL +F EM   G+   R +YN LL  +   G  E+A  + + M     
Sbjct: 419 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 478

Query: 384 SPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNLDKMLK 443
             D+ +Y  +L  Y      +  +  F ++K++   PN++TY TLI GY+K     + ++
Sbjct: 479 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 538

Query: 444 KYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNILLSLAN 503
            + E K  G+R + ++ + ++DA  KN   GSAV    E+   G+ P+    N ++    
Sbjct: 539 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 598

Query: 504 TAEELDEA 508
            +  +D +
Sbjct: 599 RSATMDRS 603

[Close]
BLAST of CmoCh01G013820 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 2.1e-42
Identity = 100/388 (25.77%), Postives = 191/388 (49.23%), Query Frame = 1 

Query: 116 KKWNIVSEILEWLRTQSWWNFSEMD---YLMLITAYGKLGEFNRAEKVLNLMNKKGYAPN 175
           KK+++     +W   Q  +  S +D     ++I+  GK G  + A  + N + + G++ +
Sbjct: 149 KKFDLALRAFDWFMKQKDYQ-SMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 208

Query: 176 VISHTALMEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVE-GCKFKEAEELF 235
           V S+T+L+ A+   GRY  A  +F++M+  G +P+ +TY ++L  F + G  + +   L 
Sbjct: 209 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 268

Query: 236 DSLLNKEGQVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSF- 295
           + +   +   + PD   ++ +I   K+   +++A ++F EM A G     +TYN+L+   
Sbjct: 269 EKM---KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY 328

Query: 296 --ETNYKEVSRIYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTR 355
                 KE  ++ ++M   G  P +V+Y  LI AY +    +EA+ +  +M + G +P  
Sbjct: 329 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 388

Query: 356 KAYNILLDAFAISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQ 415
             Y  LL  F  +G VE A  +F+ MR   C P+IC++   +  Y N          F +
Sbjct: 389 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 448

Query: 416 LKQDGFRPNVVTYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKD 475
           +   G  P++VT+ TL+  + +     ++   ++EMK  G    +    T++ A+ +   
Sbjct: 449 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 508

Query: 476 FGSAVIWFKEIESCGVRPDQKAKNILLS 497
           F  A+  ++ +   GV PD    N +L+
Sbjct: 509 FEQAMTVYRRMLDAGVTPDLSTYNTVLA 532

[Close]
BLAST of CmoCh01G013820 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 3.4e-40
Identity = 114/437 (26.09%), Postives = 210/437 (48.05%), Query Frame = 1 

Query: 80  IEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKW--NIVSEILEWLRTQSWWNFS 139
           I++  S V + ++       +  + VL   +R K+   +  N+  E+LE     S  + +
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE-----SQVSPN 209

Query: 140 EMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFR 199
              Y +LI  +   G  + A  + + M  KG  PNV+++  L++ Y +  + ++   + R
Sbjct: 210 VFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 269

Query: 200 RMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFK 259
            M   G EP+ ++Y +++       + KE   +   + N+ G  L  D+  ++ +I  + 
Sbjct: 270 SMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGYSL--DEVTYNTLIKGYC 329

Query: 260 KAGNYEKARKLFSEMAARGVPQSTITYNSL---MSFETNYKEVSRIYDQMQRAGLQPDVV 319
           K GN+ +A  + +EM   G+  S ITY SL   M    N        DQM+  GL P+  
Sbjct: 330 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 389

Query: 320 SYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSM 379
           +Y  L+  + +     EA  V  EM D G  P+   YN L++   ++G +E A  V + M
Sbjct: 390 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 449

Query: 380 RRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNL 439
           +    SPD+ SY+T+LS +  + D++ A    R++ + G +P+ +TY +LI+G+ +    
Sbjct: 450 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 509

Query: 440 DKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNIL 499
            +    YEEM   G+  ++   T +++A+    D   A+    E+   GV PD    ++L
Sbjct: 510 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 569

Query: 500 LSLANTAEELDEANQLV 512
           ++  N      EA +L+
Sbjct: 570 INGLNKQSRTREAKRLL 578

[Close]
BLAST of CmoCh01G013820 vs. TAIR10
Match: AT1G63130.1 (AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-38
Identity = 95/358 (26.54%), Postives = 183/358 (51.12%), Query Frame = 1 

Query: 141 YLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFRRMQ 200
           Y +LI  + +  + + A  VL  M K GY P++++  +L+  +  G R ++A ++  +M 
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178

Query: 201 SGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFKKAG 260
             G +P + T+  ++       +  EA  L D ++ K  Q   PD   + +++    K G
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ---PDLVTYGIVVNGLCKRG 238

Query: 261 NYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVS---RIYDQMQRAGLQPDVVSYA 320
           + + A  L  +M    +    + YN+++    NYK V+    ++ +M   G++P+VV+Y 
Sbjct: 239 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 298

Query: 321 LLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSMRRD 380
            LI       R  +A  +  +M++  + P    ++ L+DAF   G + +A+ ++  M + 
Sbjct: 299 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 358

Query: 381 RCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNLDKM 440
              PDI +Y+++++ +     ++ A+  F  +      PNVVTY TLIKG+ K   +D+ 
Sbjct: 359 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 418

Query: 441 LKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNILL 496
           ++ + EM   G+  N +  TT++  F + ++  +A I FK++ S GV PD    +ILL
Sbjct: 419 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473

[Close]
BLAST of CmoCh01G013820 vs. NCBI nr
Match: gi|659129368|ref|XP_008464650.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Cucumis melo])

HSP 1 Score: 1025.0 bits (2649), Expect = 5.0e-296
Identity = 517/580 (89.14%), Postives = 552/580 (95.17%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ LILKPV+S PLPNWSK QA+ HSISSNVNVR RLVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQTLILKPVVSAPLPNWSKLQAQTHSISSNVNVRRRLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQK WR+LMNEIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDAADEAEQKKWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VSEILEWLRTQSWWNFSEMD++MLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+SHTALM
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEG KFKEAEELFDSLLNKE  
Sbjct: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKP 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHM+IYMFKKAGNYEKARK+F+EMAARGVPQ+T+TYNSLMSFETNYKEVS+I
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           YDQMQRAGL+PDVVSYALLI AYGKARREEEALAVFEEMLDAG+RPT KAYNILLDAFAI
Sbjct: 301 YDQMQRAGLKPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAI 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SG+VEQAK VFKSM+RDRC+PDICSYTTMLSAYVNASDMEGAE FFR+LKQDGFRPNVVT
Sbjct: 361 SGLVEQAKTVFKSMKRDRCNPDICSYTTMLSAYVNASDMEGAETFFRRLKQDGFRPNVVT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAKINNL+KM+K+YEEMK+NGIRVNQ ILTTIMDA+GKNKDF SAVIWFKEIE
Sbjct: 421 YGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFDSAVIWFKEIE 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSM-EDEDEEDNE 540
           SCG+RPDQKAKNILLSLA TAEEL+EANQLVGY +QSS+ +R GKFSRS+ +DE+EED+E
Sbjct: 481 SCGLRPDQKAKNILLSLAKTAEELEEANQLVGYSSQSSNPQRGGKFSRSIADDEEEEDDE 540

Query: 541 LDYADDVIHHNNQRDEKIILNGIHQ----QNLEGLCAKIC 576
           LDY DDVIHH NQRDEKIILNGIHQ    QNLEGLCAKIC
Sbjct: 541 LDYGDDVIHHTNQRDEKIILNGIHQRNLEQNLEGLCAKIC 580

[Close]
BLAST of CmoCh01G013820 vs. NCBI nr
Match: gi|449463623|ref|XP_004149531.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 [Cucumis sativus])

HSP 1 Score: 1024.2 bits (2647), Expect = 8.6e-296
Identity = 519/580 (89.48%), Postives = 551/580 (95.00%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ LILKPV+S PLPNWSK QA+ HSISSNVNVR +LVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQTLILKPVVSAPLPNWSKLQAQTHSISSNVNVRRKLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKD ADEAEQKNWR+LMNEIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDEADEAEQKNWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VSEILEWLRTQSWWNFSEMD++MLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+SHTALM
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYGRG RYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEG KFKEAEELFDSLLNKE  
Sbjct: 181 EAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKP 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHM+IYMFKKAGNYEKARK+F+EMAARGVPQ+T+TYNSLMSFETNYKEVS+I
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           YDQMQRAGLQPDVVSYALLI AYGKARREEEALAVFEEMLDAG+RPT KAYNILLDAFAI
Sbjct: 301 YDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFAI 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SGMVEQAKIVFKSM+RDRCSPDICSYTTMLSAYVNASDMEGAE FFR+LKQDGFRPNVVT
Sbjct: 361 SGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPNVVT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAKINNL+KM+K+YEEMK+NGIRVNQ ILTTIMDA+GKNKDFGSAVIWF EIE
Sbjct: 421 YGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSAVIWFNEIE 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSM-EDEDEEDNE 540
           SCG+RPDQKAKNILLSLA TAEELDEANQLVGY +QSS  +R GKFSRS+ +DE+EE++E
Sbjct: 481 SCGLRPDQKAKNILLSLAKTAEELDEANQLVGYSSQSSSPQRGGKFSRSIADDEEEEEDE 540

Query: 541 LDYADDVIHHNNQRDEKIILNGIHQ----QNLEGLCAKIC 576
           LDYADDVI H NQRDEKIILNGIHQ    QNLEGLCAKIC
Sbjct: 541 LDYADDVIPHTNQRDEKIILNGIHQQNLEQNLEGLCAKIC 580

[Close]
BLAST of CmoCh01G013820 vs. NCBI nr
Match: gi|657976540|ref|XP_008380155.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Malus domestica])

HSP 1 Score: 844.7 bits (2181), Expect = 9.3e-242
Identity = 431/588 (73.30%), Postives = 507/588 (86.22%), Query Frame = 1 

Query: 1   MPQALILKPVIS-VPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLE 60
           MPQ L LKP IS  PL NWS+ +   +SI SNV VRGR+ V CMGML PRKFLQKRKK+E
Sbjct: 1   MPQTLFLKPFISSAPLDNWSRLKECTNSIGSNVRVRGRVGVVCMGMLAPRKFLQKRKKVE 60

Query: 61  VFKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWN 120
           VFKDAADEAEQKNWR+LMNEIEETGSAVSVLKS ++K++ I KD+VLGTLVRFKQLKKWN
Sbjct: 61  VFKDAADEAEQKNWRRLMNEIEETGSAVSVLKSEKLKDKTIPKDVVLGTLVRFKQLKKWN 120

Query: 121 IVSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTAL 180
           +VS+ILEWL+TQ+WW+FS+MD+LMLITAYGK G + RAEK+L+LMN+KGY P+VISHTAL
Sbjct: 121 LVSQILEWLQTQNWWDFSKMDFLMLITAYGKQGHYTRAEKLLSLMNEKGYPPSVISHTAL 180

Query: 181 MEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEG 240
           MEAYG+GGRYNNAEAIFRRMQS GPEPSA+TYQI+LK FVEGCKFKEAEE+F++LLN+E 
Sbjct: 181 MEAYGKGGRYNNAEAIFRRMQSSGPEPSAVTYQIILKIFVEGCKFKEAEEIFETLLNEEK 240

Query: 241 QVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSR 300
             LKPDQKMFHMMIYM+KKAG+Y+KARK+FS M+ RGVPQST+TYNSLMSFE NYKEVS+
Sbjct: 241 SPLKPDQKMFHMMIYMYKKAGSYDKARKMFSVMSERGVPQSTVTYNSLMSFENNYKEVSK 300

Query: 301 IYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA 360
           +Y+QMQRAGL+PDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA
Sbjct: 301 MYNQMQRAGLRPDVVSYALLISAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA 360

Query: 361 ISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVV 420
           +SGMV+QA+ VFKSMRRDR +PD+CSYTTMLSAYVNASDMEGAE FF ++KQD F+PNVV
Sbjct: 361 VSGMVDQARTVFKSMRRDRFNPDLCSYTTMLSAYVNASDMEGAEKFFIRIKQDAFKPNVV 420

Query: 421 TYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEI 480
           TYGTLIKGYAK +N++KM++KYEEM+ +GI+ NQ ILTTIMDA+GKN+DFGSAV+W++E+
Sbjct: 421 TYGTLIKGYAKTSNIEKMMEKYEEMQASGIKPNQTILTTIMDAYGKNRDFGSAVVWYQEM 480

Query: 481 ESCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKF-----SRSMEDED 540
           ESC + PDQKAKNILLSLA TAEE   ANQLVG  +QSS+ + +GK+         EDED
Sbjct: 481 ESCRLPPDQKAKNILLSLAKTAEEQKVANQLVGNLDQSSNEQGSGKYPVPTDENDSEDED 540

Query: 541 EE---------DNELDYADDVIHHN-NQRDEKIILNGIHQQNLEGLCA 573
           E+         D+ELD    V   N  Q+ E + LNG++++NLEGL A
Sbjct: 541 EDEDEDEDEKYDDELDGPSLVTSSNAEQKHELVYLNGVNEKNLEGLLA 588

[Close]
BLAST of CmoCh01G013820 vs. NCBI nr
Match: gi|657976542|ref|XP_008380156.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X2 [Malus domestica])

HSP 1 Score: 839.3 bits (2167), Expect = 3.9e-240
Identity = 430/588 (73.13%), Postives = 505/588 (85.88%), Query Frame = 1 

Query: 1   MPQALILKPVIS-VPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLE 60
           MPQ L LKP IS  PL NW   +   +SI SNV VRGR+ V CMGML PRKFLQKRKK+E
Sbjct: 1   MPQTLFLKPFISSAPLDNWRLKECT-NSIGSNVRVRGRVGVVCMGMLAPRKFLQKRKKVE 60

Query: 61  VFKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWN 120
           VFKDAADEAEQKNWR+LMNEIEETGSAVSVLKS ++K++ I KD+VLGTLVRFKQLKKWN
Sbjct: 61  VFKDAADEAEQKNWRRLMNEIEETGSAVSVLKSEKLKDKTIPKDVVLGTLVRFKQLKKWN 120

Query: 121 IVSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTAL 180
           +VS+ILEWL+TQ+WW+FS+MD+LMLITAYGK G + RAEK+L+LMN+KGY P+VISHTAL
Sbjct: 121 LVSQILEWLQTQNWWDFSKMDFLMLITAYGKQGHYTRAEKLLSLMNEKGYPPSVISHTAL 180

Query: 181 MEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEG 240
           MEAYG+GGRYNNAEAIFRRMQS GPEPSA+TYQI+LK FVEGCKFKEAEE+F++LLN+E 
Sbjct: 181 MEAYGKGGRYNNAEAIFRRMQSSGPEPSAVTYQIILKIFVEGCKFKEAEEIFETLLNEEK 240

Query: 241 QVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSR 300
             LKPDQKMFHMMIYM+KKAG+Y+KARK+FS M+ RGVPQST+TYNSLMSFE NYKEVS+
Sbjct: 241 SPLKPDQKMFHMMIYMYKKAGSYDKARKMFSVMSERGVPQSTVTYNSLMSFENNYKEVSK 300

Query: 301 IYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA 360
           +Y+QMQRAGL+PDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA
Sbjct: 301 MYNQMQRAGLRPDVVSYALLISAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFA 360

Query: 361 ISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVV 420
           +SGMV+QA+ VFKSMRRDR +PD+CSYTTMLSAYVNASDMEGAE FF ++KQD F+PNVV
Sbjct: 361 VSGMVDQARTVFKSMRRDRFNPDLCSYTTMLSAYVNASDMEGAEKFFIRIKQDAFKPNVV 420

Query: 421 TYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEI 480
           TYGTLIKGYAK +N++KM++KYEEM+ +GI+ NQ ILTTIMDA+GKN+DFGSAV+W++E+
Sbjct: 421 TYGTLIKGYAKTSNIEKMMEKYEEMQASGIKPNQTILTTIMDAYGKNRDFGSAVVWYQEM 480

Query: 481 ESCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKF-----SRSMEDED 540
           ESC + PDQKAKNILLSLA TAEE   ANQLVG  +QSS+ + +GK+         EDED
Sbjct: 481 ESCRLPPDQKAKNILLSLAKTAEEQKVANQLVGNLDQSSNEQGSGKYPVPTDENDSEDED 540

Query: 541 EE---------DNELDYADDVIHHN-NQRDEKIILNGIHQQNLEGLCA 573
           E+         D+ELD    V   N  Q+ E + LNG++++NLEGL A
Sbjct: 541 EDEDEDEDEKYDDELDGPSLVTSSNAEQKHELVYLNGVNEKNLEGLLA 587

[Close]
BLAST of CmoCh01G013820 vs. NCBI nr
Match: gi|645246962|ref|XP_008229604.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like [Prunus mume])

HSP 1 Score: 835.9 bits (2158), Expect = 4.3e-239
Identity = 423/581 (72.81%), Postives = 496/581 (85.37%), Query Frame = 1 

Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP IS PL NWSK +A  +SI +NV VRGR+ V CMGML PRKFLQKRKK+EV
Sbjct: 1   MPQTLFLKPFISAPLDNWSKLKACTNSIGANVKVRGRVGVVCMGMLAPRKFLQKRKKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQKNWR+LMNEIEETGSAVSVLKS R+K++ I KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDAADEAEQKNWRRLMNEIEETGSAVSVLKSERLKDKTIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALM 180
           VS+ILEWL+TQ+WW+FS+MD+LMLITAYGK G FN AEKVL+LMN+KG  P+VISHTALM
Sbjct: 121 VSQILEWLQTQNWWDFSKMDFLMLITAYGKQGHFNGAEKVLSLMNEKGIPPSVISHTALM 180

Query: 181 EAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQ 240
           EAYG+GGRYNNAEAIFRRMQS GPEPSA+TYQI+LK FVEGCKFKEAEE+F++LL++   
Sbjct: 181 EAYGKGGRYNNAEAIFRRMQSSGPEPSAVTYQIILKIFVEGCKFKEAEEIFETLLDEGKS 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
            LKPDQKMFHMMIYM+KKAG+Y+KARK+F+ MA RGV QST+TYNSLMSFETNYKEVS++
Sbjct: 241 PLKPDQKMFHMMIYMYKKAGSYDKARKMFALMAERGVQQSTVTYNSLMSFETNYKEVSKM 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAI 360
           Y+QMQRAGL+PDVVSYALLI AYGKARREEEALAVFEEMLDAGVRPT KAYNILLDAFA+
Sbjct: 301 YNQMQRAGLRPDVVSYALLISAYGKARREEEALAVFEEMLDAGVRPTPKAYNILLDAFAV 360

Query: 361 SGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVT 420
           SGMV+QA+ VFKSMRRDR  PD+CSYTTMLSAYVNASDMEGAE FF ++KQD  +PN+VT
Sbjct: 361 SGMVDQARTVFKSMRRDRYKPDLCSYTTMLSAYVNASDMEGAEKFFLRIKQDALKPNIVT 420

Query: 421 YGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIE 480
           YGTLIKGYAK NN++KM++KYEEM+  G++ NQ ILTTIMDA+GKN+DFGSAV+W+KE+E
Sbjct: 421 YGTLIKGYAKTNNIEKMMEKYEEMQAAGVKPNQTILTTIMDAYGKNRDFGSAVVWYKEME 480

Query: 481 SCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKF----------SRSM 540
           +C + PDQKAKNIL SLA TAEE   ANQ+VG  +Q S+ +   KF              
Sbjct: 481 TCSLPPDQKAKNILFSLAKTAEEQKVANQIVGNLDQCSNEQGGAKFLVPVDENDSEDEDA 540

Query: 541 EDEDEEDNELDYADDVI-HHNNQRDEKIILNGIHQQNLEGL 571
           +D+D  D+ELD    VI  ++ Q+ E I LNG +++NL+GL
Sbjct: 541 DDDDNHDDELDGPSQVISSYDEQKHELIYLNGDNEKNLDGL 581

The following BLAST results are available for this feature:
BLAST of CmoCh01G013820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP287_ARATH7.2e-21866.72Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN... [more]
PP178_ARATH1.7e-4127.99Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
PP362_ARATH3.7e-4125.77Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH6.0e-3926.09Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
RF1_ORYSI1.1e-3728.18Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
BLAST of CmoCh01G013820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2Y5_CUCSA6.0e-29689.48Uncharacterized protein OS=Cucumis sativus GN=Csa_4G616760 PE=4 SV=1[more]
M5WWZ9_PRUPE1.7e-23473.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002772mg PE=4 SV=1[more]
A0A067FJR1_CITSI1.0e-23170.05Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007543mg PE=4 SV=1[more]
V4TI43_9ROSI3.9e-23170.12Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014674mg PE=4 SV=1[more]
A0A067KNM9_JATCU1.2e-22469.62Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06728 PE=4 SV=1[more]
BLAST of CmoCh01G013820 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59040.28.7e-21467.08 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G31400.19.5e-4327.99 genomes uncoupled 1[more]
AT5G02860.12.1e-4225.77 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39710.13.4e-4026.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G63130.11.4e-3826.54 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmoCh01G013820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129368|ref|XP_008464650.1|5.0e-29689.14PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Cuc... [more]
gi|449463623|ref|XP_004149531.1|8.6e-29689.48PREDICTED: pentatricopeptide repeat-containing protein At3g59040 [Cucumis sativu... [more]
gi|657976540|ref|XP_008380155.1|9.3e-24273.30PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Mal... [more]
gi|657976542|ref|XP_008380156.1|3.9e-24073.13PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X2 [Mal... [more]
gi|645246962|ref|XP_008229604.1|4.3e-23972.81PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like [Prunus mu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006364 rRNA processing
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh01G013820.1CmoCh01G013820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 457..484
score: 0.023coord: 141..168
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 381..430
score: 1.3E-12coord: 171..218
score: 1.1E-8coord: 247..288
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 299..358
score: 1.4
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 350..383
score: 2.0E-6coord: 456..487
score: 0.0015coord: 248..278
score: 1.8E-5coord: 141..173
score: 9.5E-6coord: 314..347
score: 4.7E-8coord: 419..452
score: 3.9E-7coord: 174..207
score: 1.5E-5coord: 385..418
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 452..486
score: 8.879coord: 382..416
score: 11.038coord: 347..381
score: 10.665coord: 417..451
score: 11.104coord: 245..279
score: 10.304coord: 312..346
score: 12.912coord: 172..206
score: 11.235coord: 137..171
score: 10.205coord: 207..241
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 265..443
score: 1.0E-6coord: 131..264
score: 6.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 118..307
score: 4.1
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 84..562
score: 5.5E
NoneNo IPR availablePANTHERPTHR24015:SF722SUBFAMILY NOT NAMEDcoord: 84..562
score: 5.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh01G013820Cucsa.058660Cucumber (Gy14) v1cgycmoB0074
CmoCh01G013820CmaCh01G013280Cucurbita maxima (Rimu)cmacmoB468
CmoCh01G013820Cla023250Watermelon (97103) v1cmowmB453
CmoCh01G013820Csa4G616760Cucumber (Chinese Long) v2cmocuB455
CmoCh01G013820MELO3C026387Melon (DHL92) v3.5.1cmomeB430
CmoCh01G013820ClCG11G016650Watermelon (Charleston Gray)cmowcgB387
CmoCh01G013820CSPI04G21790Wild cucumber (PI 183967)cmocpiB459
CmoCh01G013820Lsi04G019020Bottle gourd (USVL1VR-Ls)cmolsiB415
CmoCh01G013820Cp4.1LG02g02610Cucurbita pepo (Zucchini)cmocpeB448
CmoCh01G013820MELO3C026387.2Melon (DHL92) v3.6.1cmomedB494
CmoCh01G013820CsaV3_4G032160Cucumber (Chinese Long) v3cmocucB0543
CmoCh01G013820Cla97C11G222580Watermelon (97103) v2cmowmbB430
CmoCh01G013820Bhi09G002983Wax gourdcmowgoB0620
CmoCh01G013820CsGy4G020310Cucumber (Gy14) v2cgybcmoB477
CmoCh01G013820Carg24711Silver-seed gourdcarcmoB0881
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh01G013820Cucurbita moschata (Rifu)cmocmoB013
CmoCh01G013820Cucurbita moschata (Rifu)cmocmoB022
CmoCh01G013820Cucurbita maxima (Rimu)cmacmoB051
CmoCh01G013820Cucurbita maxima (Rimu)cmacmoB041
CmoCh01G013820Wild cucumber (PI 183967)cmocpiB473
CmoCh01G013820Melon (DHL92) v3.5.1cmomeB423
CmoCh01G013820Melon (DHL92) v3.5.1cmomeB439
CmoCh01G013820Cucurbita pepo (Zucchini)cmocpeB461
CmoCh01G013820Cucurbita pepo (Zucchini)cmocpeB469
CmoCh01G013820Melon (DHL92) v3.6.1cmomedB487
CmoCh01G013820Melon (DHL92) v3.6.1cmomedB503
CmoCh01G013820Silver-seed gourdcarcmoB1400
CmoCh01G013820Silver-seed gourdcarcmoB1401
CmoCh01G013820Cucumber (Chinese Long) v3cmocucB0560