Carg24711 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24711
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tetratricopeptide repeat-like superfamily protein
Location	Cucurbita_argyrosperma_scaffold_270 : 109705 .. 114850 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGATATTAAACAGACCCTCTGCAACTGCGCGCTCTGAGAAAAAAATATCAAACGCCGGAAGGACGAAGGCGGAGCTCCGGTCGCATCATAGCCATTTTTGCCGAAATTAGAGCTTTCTCAGATGCCTCAAGCTCTGATTCTGAAGCCAGTTATATCAGTTCCTCTTCCCAATTGGAGGTTACGCTTAAACCTCTTACTTAAACCCTTTCGCTCGTTATTCATTGTCATACTTGTTCCCATTTTTGTTTGCGAGCGCTTGGTTGTTGATTTCTTTTATTTTCATTTTGTGATGAACTGCAATTATACTCTCTTTTTAATGATTTTCTATCTCAATTCAAGTAGCTAACTCGAAAATTCCTGGCACTGAATGGTATCTTAATTCTGTCTGGTTCTAAAATTTCTATTTGAGAGCTGTTTTATCGATCCTTTTTGTTCTGCGGATTCTTACTATATTTTTGGAGAGCTATTCGTTGATATTAGATTGTGGATTTAGGGATTTTTGAAGTTGTGAGTCTTTGAAACGTTGAACGTCTGCTTGATTTCTGAAGGATTAGTTGTACTTTTGGAGAAATGTGGATTTTCTAGGTTCTTTAGGGTTCAATCTGCGCTAGCATGTATTAATTGGCATTGGATATCTATGCTAAGATCTAATTCATTACCAAAAAATGTTAAAAGTGGGGACAAGTATCAGATTGTTAATAGTATGAGCAGAACTAGTGCATCTGTGCAGAGGTCTTTACAAATTTTGAACTAATGTAATGTTTATTCGGTGGTGAAAATGTGCTATGTTGTTTTTATTTCAGTAAATCGCAAGCACGCAGACATTCTATTAGTTCGAATGTTAATGTACGTGGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGGAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCGGACGAGGCAGAGCAGAAGAATTGGAGGAAACTGATGAATGAAATAGAGGAGACAGGCTCTGCTGTTTCTGTGCTGAAAAGTGGAAGGATAAAAAATGAGGCTATTCAGAAGGATTTAGTGTTGGGCACCTTGGTTAGATTTAAACAGCTAAAGAAATGGAACATTGTCAGTGAGGTACAGAGCATAAACATTTGTATGATTTGATATTTACTCTTGTTTCAAAATTTTGTTCTTTATAGGAGGAAATGAAAAATGAATCTCGAAGGGCAAATTGCCTGAAATTAGAATTGAATGAGTATAAAAATGTAGTCTTATGTAAGATAATGCAATGCACCATCTGATGTATAGTCTGCCTCTAAAGTTTGTGAAACAATTTAGACCCTATTTCGAAATCATTAACATCTTCTAGTTGGAATCAGAAGATGTACTTAAACACTATGTTCGTGTAAGAATTGTTCACAATGCGTGTTTTTACTTCAATATGAATATCAAATAATTTAAGTTAAAAAATGAAGTTCTTGCATGGTCGTTGTAATGTCCGGATTCTATTCCTAAGTCCTTTGTTTTACAACTTACAAGCTTCAGATGTGCTGATCGTCCAAAATCGTGTTTTTCAACTGTCTTATAGATTCTCGAATGGCTCCGGATCCAGAGCTGGTGGAACTTTAGTGAAATGGATTATTTGATGCTTATTACAGCTTATGGAAAGCTAGGGGAGTTCAATCGTGCAGAAAAAGTTTTAAACTTGATGAATAAGAAGGGTTATGCACCAAACGTGATCTCTCATACTGCTCTTATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCCGGTGGTCCTGAACCTTCTGCATTGACATATCAAATTATGCTAAAAACTTTTGTTGAGGTACTAAGTTTAAACATTATCTTATTTAAAGCCTTTCAACTATATTCCTTCATTTATCGGTCTAATCCTTCAATTCGACCCTCATGAAAATCAAGAATGTTCTTAATTATTGTGAACTTTCAATGTCAAATTTGGGGCGTTTAAGGCTGTATATGTGATTCTGGATATTATGCTCCAATGCAGAATAATTTTGTTGGAACTTGAAACACAAGCTCTCCCTATCAAGATTTTCACCCAAAACTCAAAGCTGATCACAATCTGAATTTTGATTTAATTTATTTTTATTCTTTGGATATAAGTTCCTAACCGAACGAATCAAACACTTTGCAAAATTTCGTTTCAGAAACTCGTTTTCTTCTTTCAAGCCTATGCAATCTTCGAATGTGTGCATTTCTTGGTTTGTTTGTTTTGGTTCACAAAATGACGAGGCATTACTGTAGGGATGTAAATTCAAGGAAGCTGAAGAACTCTTTGACTCCCTCTTGAACAAGGAAGGGCAAGTATTGAAGCCAGACCAAAAGATGTTCCACATGATGATTTATATGTTCAAGAAGGCTGGGAATTACGAAAAGGCTCGTAAATTATTTTCTGAAATGGCAGCACGAGGAGTTCCACAATCTACAATTACTTATAATAGTTTGATGTCGTTTGAAACCAACTACAAGGAGGTCTCGAGGATTTATGATCAGGTAAACCTATATGGGTTGGTCTTTACTAGACATTGTTTTCACATGGGTGAAAGTTCTAGGAATTTCAGATGTAGGATACTGTCACTGAATAATTTTCTCTTATGAACGGGGCTGTTTAGGTTTTCGATTGAGCAACACTTTTCCTGAGCCACTGATTTTAAGACCATATGCTGATTTCTGTCTAGTTTATGTGATTTTAATGCTCTGGATATGAAAGTCTTATTGGGTTCTTTCCATTGTAGTTTTAATCTTTTAAGACAATAACCATGTGAACATTCAATTGGCAAGTGTGTAACTGTCACATTTTCTGGGTTGTGTGAATTGAAGACCGATTGAACGATGTAGCAAATATTGGTATGATCGAGATGTTAGGGAAACGGAATCTTGAATATTTGGTAACTTCCATTCCATCACAAGAATATTAGCGGCTGTGTTGTAGTTAAAATTTTGGGAGGTTATGCTTTTGCTTCAGTGGCCAATGTTGTCAGCCAATTTAATAGTTTAATCTTTTGTTCATCTCCTATTCCTTCTTAACGAGATTGATCAAATTTGAATTCAAATTCTCATCTGTAGATGCAAAGAGCTGGACTCCAACCAGATGTTGTCAGCTATGCTTTACTCATTGGTGCTTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCAGTTTTTGAGGAAATGCTTGATGCTGGTGTCAGGTACTTCCCTTCGGCACTTTCTTCTTTTAACTACCGCATATAGTATCTGGTTGGAAATCAATATTCTCCCATAATATGGGTTTCATTTTTCTATTTTGCTTCAAATTCACTTGACACGGCATCGGGCTGTAACAGCCCAACCCCATCGCTAGCAGATATTGTTCTCTTTAGGTTTTCTATTTCGGGCTTCCCCTCAAGATCTTTAAAACGCGTCAACTAGGGAGAGGTTTCCACACCTTTACAAATAATGCTTCATTCTCCTTCCCTACAACCATCGATAGATTGCGAGATCCCGCATCGATTAGAGAAGGAGACGAGTGCCAGCGACGACGCTGGGTCCTAAAGGAGGGTGGATTGTGAGATCCCACGTCGGTTGGGGAGGAGAATAAAGCATTCTTTATAAGAGTGTGAAAATCTCTCTTTAGCAAACACGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGAAAAACCCAAAAAGGACAATATCTACTAGCGGTGGACTTGAGCTGGTACACGGCCATTGCTAATGATGAATAGTAAACCAAAATAGTTGTGCACTGATAAAACGTTTCTGCCTGGCGTTTTTCAGACCAACTCGCAAAGCTTATAATATTTTGCTTGATGCATTTGCCATCTCTGGGATGGTCGAGCAAGCTAAGATTGTGTTCAAGAGTATGAGAAGAGACAGGTACTATTATCTGCCTAATGATTGCATTTAGTGATTCAATATCCTCTTTTAGTGTAGTATTGATTGAAGTTTATGTAGTTTGGTTCCAATTCCTTAGTTCTTTTGGCATGCATTTCTTGAGCTTTTGGTAATAGATTGGCATCATCATTTGTTTGATACAGATGCAGTCCAGATATATGCTCATATACAACCATGTTATCAGCTTATGTCAATGCATCCGACATGGAAGGAGCCGAAATTTTTTTCAGACAACTGAAACAGGACGGTTTTCGACCCAATGTCGTTACTTATGGTACATTGATCAAAGGGTATGCTAAAATAAATAATCTTGACAAGATGCTTAAAAAATATGAAGAAATGAAGCTCAATGGAATAAGAGTGAATCAGATGATTTTGACAACGATCATGGATGCATTTGGAAAAAACAAGGATTTTGGCAGTGCTGTTATTTGGTTCAAGGAAATCGAATCGTGTGGCGTTCGACCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCGAACACAGCCGAAGAGCTCGATGAAGCTAATCAACTCGTAGGATATCCAAATCAAAGTAGCGATGCCGAAAGAGCAGGTAAGTTTTCTAGGTCTGTGGAGGACGAGGACGAGGACGAGGAAGACGATGAATTGGATTATGCTGATGATGTAATTCATCACAATAACCAAAGAGATGAGAAAATTATTTTGAATGGCATTCACCAACAAAACTTGGAGGGTTTATGTGCTAAGATCTGTTAATGTTATATATTTGTTTACTCTATGTTGGTATATTGTAATACAAAATTCACTTAGCTGGAGAAATCTAAGTCCTTTCTCAAATCACAACCTAGCTGGTATACAACTGTGGAACTTTGATGCCCATTTTTGTTATATTTTCATTCATTTCTCGAGTCTAAATTTCGTTTTATCTAGTTCTTACATGTATATAATGTTTCAGATTTTACGAGTTTTTTTTATCAGGAGACGTGAGATCAAACAATTGTCTTGTGCAACTAAACCGGTCTCGACCTACGATCATGTAGAGTCGTAAAATCCAAGGTAATACTGGACTATGGGTAGTGAGAATTGCTGTTGTTTGTGAGTTATAGTGGGTCGTTTAATTTAATCATCTTTTAAAACCCGTTAAGATGATAATAGTTGCTTTAATTCATGTGCACTGGTGAAATTATTATGTCGTGAGATT

mRNA sequence

ATAAGATATTAAACAGACCCTCTGCAACTGCGCGCTCTGAGAAAAAAATATCAAACGCCGGAAGGACGAAGGCGGAGCTCCGGTCGCATCATAGCCATTTTTGCCGAAATTAGAGCTTTCTCAGATGCCTCAAGCTCTGATTCTGAAGCCAGTTATATCAGTTCCTCTTCCCAATTGGAGTAAATCGCAAGCACGCAGACATTCTATTAGTTCGAATGTTAATGTACGTGGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGGAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCGGACGAGGCAGAGCAGAAGAATTGGAGGAAACTGATGAATGAAATAGAGGAGACAGGCTCTGCTGTTTCTGTGCTGAAAAGTGGAAGGATAAAAAATGAGGCTATTCAGAAGGATTTAGTGTTGGGCACCTTGGTTAGATTTAAACAGCTAAAGAAATGGAACATTGTCAGTGAGATTCTCGAATGGCTCCGGATCCAGAGCTGGTGGAACTTTAGTGAAATGGATTATTTGATGCTTATTACAGCTTATGGAAAGCTAGGGGAGTTCAATCGTGCAGAAAAAGTTTTAAACTTGATGAATAAGAAGGGTTATGCACCAAACGTGATCTCTCATACTGCTCTTATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCCGGTGGTCCTGAACCTTCTGCATTGACATATCAAATTATGCTAAAAACTTTTGTTGAGGGATGTAAATTCAAGGAAGCTGAAGAACTCTTTGACTCCCTCTTGAACAAGGAAGGGCAAGTATTGAAGCCAGACCAAAAGATGTTCCACATGATGATTTATATGTTCAAGAAGGCTGGGAATTACGAAAAGGCTCGTAAATTATTTTCTGAAATGGCAGCACGAGGAGTTCCACAATCTACAATTACTTATAATAGTTTGATGTCGTTTGAAACCAACTACAAGGAGGTCTCGAGGATTTATGATCAGATGCAAAGAGCTGGACTCCAACCAGATGTTGTCAGCTATGCTTTACTCATTGGTGCTTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCAGTTTTTGAGGAAATGCTTGATGCTGGTGTCAGACCAACTCGCAAAGCTTATAATATTTTGCTTGATGCATTTGCCATCTCTGGGATGGTCGAGCAAGCTAAGATTGTGTTCAAGAGTATGAGAAGAGACAGATGCAGTCCAGATATATGCTCATATACAACCATGTTATCAGCTTATGTCAATGCATCCGACATGGAAGGAGCCGAAATTTTTTTCAGACAACTGAAACAGGACGGTTTTCGACCCAATGTCGTTACTTATGGTACATTGATCAAAGGGTATGCTAAAATAAATAATCTTGACAAGATGCTTAAAAAATATGAAGAAATGAAGCTCAATGGAATAAGAGTGAATCAGATGATTTTGACAACGATCATGGATGCATTTGGAAAAAACAAGGATTTTGGCAGTGCTGTTATTTGGTTCAAGGAAATCGAATCGTGTGGCGTTCGACCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCGAACACAGCCGAAGAGCTCGATGAAGCTAATCAACTCGTAGGATATCCAAATCAAAGTAGCGATGCCGAAAGAGCAGGTAAGTTTTCTAGGTCTGTGGAGGACGAGGACGAGGACGAGGAAGACGATGAATTGGATTATGCTGATGATGTAATTCATCACAATAACCAAAGAGATGAGAAAATTATTTTGAATGGCATTCACCAACAAAACTTGGAGGGTTTATGTGCTAAGATCTGTTAATGTTATATATTTGTTTACTCTATGTTGGTATATTGTAATACAAAATTCACTTAGCTGGAGAAATCTAAGTCCTTTCTCAAATCACAACCTAGCTGGTATACAACTGTGGAACTTTGATGCCCATTTTTGTTATATTTTCATTCATTTCTCGAGTCTAAATTTCGTTTTATCTAGTTCTTACATGTATAGTCGTAAAATCCAAGGTAATACTGGACTATGGGTAGTGAGAATTGCTGTTGTTTGTGAGTTATAGTGGGTCGTTTAATTTAATCATCTTTTAAAACCCGTTAAGATGATAATAGTTGCTTTAATTCATGTGCACTGGTGAAATTATTATGTCGTGAGATT

Coding sequence (CDS)

ATGCCTCAAGCTCTGATTCTGAAGCCAGTTATATCAGTTCCTCTTCCCAATTGGAGTAAATCGCAAGCACGCAGACATTCTATTAGTTCGAATGTTAATGTACGTGGAAGATTGGTGGTTACCTGTATGGGTATGTTGACACCAAGGAAGTTCTTACAGAAAAGGAAGAAGTTGGAAGTATTTAAGGATGCAGCGGACGAGGCAGAGCAGAAGAATTGGAGGAAACTGATGAATGAAATAGAGGAGACAGGCTCTGCTGTTTCTGTGCTGAAAAGTGGAAGGATAAAAAATGAGGCTATTCAGAAGGATTTAGTGTTGGGCACCTTGGTTAGATTTAAACAGCTAAAGAAATGGAACATTGTCAGTGAGATTCTCGAATGGCTCCGGATCCAGAGCTGGTGGAACTTTAGTGAAATGGATTATTTGATGCTTATTACAGCTTATGGAAAGCTAGGGGAGTTCAATCGTGCAGAAAAAGTTTTAAACTTGATGAATAAGAAGGGTTATGCACCAAACGTGATCTCTCATACTGCTCTTATGGAAGCATATGGAAGAGGTGGCAGGTATAATAATGCTGAAGCAATCTTTAGAAGGATGCAATCCGGTGGTCCTGAACCTTCTGCATTGACATATCAAATTATGCTAAAAACTTTTGTTGAGGGATGTAAATTCAAGGAAGCTGAAGAACTCTTTGACTCCCTCTTGAACAAGGAAGGGCAAGTATTGAAGCCAGACCAAAAGATGTTCCACATGATGATTTATATGTTCAAGAAGGCTGGGAATTACGAAAAGGCTCGTAAATTATTTTCTGAAATGGCAGCACGAGGAGTTCCACAATCTACAATTACTTATAATAGTTTGATGTCGTTTGAAACCAACTACAAGGAGGTCTCGAGGATTTATGATCAGATGCAAAGAGCTGGACTCCAACCAGATGTTGTCAGCTATGCTTTACTCATTGGTGCTTATGGTAAAGCTAGAAGAGAGGAAGAAGCACTAGCAGTTTTTGAGGAAATGCTTGATGCTGGTGTCAGACCAACTCGCAAAGCTTATAATATTTTGCTTGATGCATTTGCCATCTCTGGGATGGTCGAGCAAGCTAAGATTGTGTTCAAGAGTATGAGAAGAGACAGATGCAGTCCAGATATATGCTCATATACAACCATGTTATCAGCTTATGTCAATGCATCCGACATGGAAGGAGCCGAAATTTTTTTCAGACAACTGAAACAGGACGGTTTTCGACCCAATGTCGTTACTTATGGTACATTGATCAAAGGGTATGCTAAAATAAATAATCTTGACAAGATGCTTAAAAAATATGAAGAAATGAAGCTCAATGGAATAAGAGTGAATCAGATGATTTTGACAACGATCATGGATGCATTTGGAAAAAACAAGGATTTTGGCAGTGCTGTTATTTGGTTCAAGGAAATCGAATCGTGTGGCGTTCGACCTGATCAAAAAGCGAAAAATATCCTGTTATCTTTGGCGAACACAGCCGAAGAGCTCGATGAAGCTAATCAACTCGTAGGATATCCAAATCAAAGTAGCGATGCCGAAAGAGCAGGTAAGTTTTCTAGGTCTGTGGAGGACGAGGACGAGGACGAGGAAGACGATGAATTGGATTATGCTGATGATGTAATTCATCACAATAACCAAAGAGATGAGAAAATTATTTTGAATGGCATTCACCAACAAAACTTGGAGGGTTTATGTGCTAAGATCTGTTAA

Protein sequence

MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEVFKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNIVSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVISHTALMEAYGRGGRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGCKFKEAEELFDSLLNKEGQVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYDQMQRAGLQPDVVSYALLIGAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFAISGMVEQAKIVFKSMRRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRQLKQDGFRPNVVTYGTLIKGYAKINNLDKMLKKYEEMKLNGIRVNQMILTTIMDAFGKNKDFGSAVIWFKEIESCGVRPDQKAKNILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSVEDEDEDEEDDELDYADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC

Homology

[Close]

BLAST of Carg24711 vs. NCBI nr
Match: XP_022940074.1 (pentatricopeptide repeat-containing protein At3g59040 [Cucurbita moschata])

HSP 1 Score: 577.0 bits (1486), Expect = 7.1e-161
Identity = 563/577 (97.57%), Postives = 564/577 (97.75%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI
Sbjct: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR QSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX
Sbjct: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI
Sbjct: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSVEDXXXXXXXX 540
           XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRS+ED        
Sbjct: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSMED--EDEEDN 540

Query: 541 XXXXADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 578
               ADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC
Sbjct: 541 ELDYADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 575

[Close]

BLAST of Carg24711 vs. NCBI nr
Match: XP_023525762.1 (pentatricopeptide repeat-containing protein At3g59040 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.9 bits (1470), Expect = 5.1e-159
Identity = 571/579 (98.62%), Postives = 573/579 (98.96%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQALILKPVISVPLPNWSKSQARRHSISSNVN+RGRLVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNIRGRLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI
Sbjct: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR QSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX
Sbjct: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI
Sbjct: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSV--EDXXXXXX 540
           XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRS+    XXXXXX
Sbjct: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSMXXXXXXXXXX 540

Query: 541 XXXXXXADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 578
           XXXXX ADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC
Sbjct: 541 XXXXXYADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 579

[Close]

BLAST of Carg24711 vs. NCBI nr
Match: XP_022981156.1 (pentatricopeptide repeat-containing protein At3g59040 [Cucurbita maxima])

HSP 1 Score: 569.3 bits (1466), Expect = 1.5e-158
Identity = 570/579 (98.45%), Postives = 572/579 (98.79%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQALILKPVISVP+PNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQALILKPVISVPVPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI
Sbjct: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR QSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX
Sbjct: 121 VSEILEWLRTQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMA RGVPQSTITYNSLMSFETNYKEVSRI
Sbjct: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAVRGVPQSTITYNSLMSFETNYKEVSRI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSVE--DXXXXXX 540
           XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAER+GKFSRSVE   XXXXXX
Sbjct: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERSGKFSRSVEXXXXXXXXX 540

Query: 541 XXXXXXADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 578
           XXXXX  DDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC
Sbjct: 541 XXXXXYTDDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 579

[Close]

BLAST of Carg24711 vs. NCBI nr
Match: XP_022139934.1 (pentatricopeptide repeat-containing protein At3g59040 [Momordica charantia])

HSP 1 Score: 463.0 bits (1190), Expect = 1.5e-126
Identity = 514/584 (88.01%), Postives = 531/584 (90.92%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQAR------RHSISSNVNVRGRLVVTCMGMLTPRKFLQK 60
           MPQ LILKPV+S PL NWSK Q                   GRL VTCMGMLTPRKFLQK
Sbjct: 1   MPQTLILKPVVSAPLTNWSKLQIHXXXXXXXXXXXXXXXXXGRLEVTCMGMLTPRKFLQK 60

Query: 61  RKKLEVFKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQ 120
           RKKLEVFKDAADEAEQKNWR+LM EIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQ
Sbjct: 61  RKKLEVFKDAADEAEQKNWRRLMKEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQ 120

Query: 121 LKKWNIVSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVI 180
           LKKWN+V EILEWLR QSWW+FSEMD+LMLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+
Sbjct: 121 LKKWNLVGEILEWLRTQSWWSFSEMDFLMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVV 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 240
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL
Sbjct: 181 SHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 240

Query: 241 LNKEGQVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNY 300
           LN E  VLKPDQKMFHMMIYMFKKAGNYEKARK+F+EMAAR VPQ+T+TYNSLMSFETNY
Sbjct: 241 LNNERAVLKPDQKMFHMMIYMFKKAGNYEKARKVFAEMAARRVPQTTVTYNSLMSFETNY 300

Query: 301 KEVSRIYDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXX 360
           KEVS+IYDQMQRAG++PDVVSYALLI AYGKARREXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 KEVSKIYDQMQRAGIRPDVVSYALLISAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSV-EDX 540
           XXXXXXXXXXXXXXX   ILLSLA TAEELDEANQLVGY NQSS+ ERA KFSRSV   X
Sbjct: 481 XXXXXXXXXXXXXXXAKNILLSLAKTAEELDEANQLVGYMNQSSNPERATKFSRSVXXXX 540

Query: 541 XXXXXXXXXXXADDVIHHNNQRDEKIILNGIHQQNLEGLCAKIC 578
           XXXXXXXX   AD+VI H NQRDEKIILN IHQQNLEGLCAK C
Sbjct: 541 XXXXXXXXLDYADEVIPHLNQRDEKIILNDIHQQNLEGLCAKFC 584

[Close]

BLAST of Carg24711 vs. NCBI nr
Match: XP_008464650.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124
Identity = 510/581 (87.78%), Postives = 529/581 (91.05%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ LILKPV+S PLPNWSK QA+ HSISSNVNVR RLVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQTLILKPVVSAPLPNWSKLQAQTHSISSNVNVRRRLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQK WR+LMNEIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDAADEAEQKKWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR QSWWNFSEMD++MLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+  XXXX
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKE  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEKP 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHM+IYMFKKAGNYEKARK+F+EMAARGVPQ+T+TYNSLMSFETN       
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNXXXXXXX 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                           ALLI AYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXALLISAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSVEDXXXXXXXX 540
           XXXXXXXXXXXXILLSLA TAEEL+EANQLVGY +QSS+ +R GKFSRS+ D XXXXXXX
Sbjct: 481 XXXXXXXXXXXXILLSLAKTAEELEEANQLVGYSSQSSNPQRGGKFSRSIAD-XXXXXXX 540

Query: 541 XXXXADDVIHHNNQRDEKIILNGIHQ----QNLEGLCAKIC 578
           X    DDVIHH NQRDEKIILNGIHQ    QNLEGLCAKIC
Sbjct: 541 XLDYGDDVIHHTNQRDEKIILNGIHQRNLEQNLEGLCAKIC 580

[Close]

BLAST of Carg24711 vs. TAIR10
Match: AT3G59040.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 327.8 bits (839), Expect = 1.4e-89
Identity = 232/312 (74.36%), Postives = 269/312 (86.22%), Query Frame = 0


Query: 19  SKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEVFKDAADEAEQKNWRKLMN 78
           S+ + + + I+  V ++ R  V CMGML PRKFLQKR+K+EVFKDAADE +QK WR LM 
Sbjct: 26  SQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLML 85

Query: 79  EIEETGSAVSVLKSGRIK-NEAIQKDLVLGTLVRFKQLKKWNIVSEILEWLRIQSWWNFS 138
           EIE TGSAV VL+  +   ++ + +DLVLGTLVRFKQLKKWN+VSEILEWLR Q+WWNFS
Sbjct: 86  EIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFS 145

Query: 139 EMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXXXXXXXXXXXXXXXXXXX 198
           E+D+LMLITAYGKLG FN AE+VL++++K G  PNV XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 146 EIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVXXXXXXXXXXXXXXXXXXXXXXXX 205

Query: 199 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQVLKPDQKMFHMMIYMFK 258
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++   LKPDQKM+HMMIYM+K
Sbjct: 206 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKSPLKPDQKMYHMMIYMYK 265

Query: 259 KAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYDQMQRAGLQPDVVSYA 318
           KAGNYEKARK+FS M  +GVPQST+TYNSLMSFET+YKEVS+IYDQMQR+ +QPDVVSYA
Sbjct: 266 KAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325

Query: 319 LLIGAYGKARRE 330
           LLI AYG+ARRE
Sbjct: 326 LLIKAYGRARRE 337

[Close]

BLAST of Carg24711 vs. TAIR10
Match: AT3G09650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-07
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 244 PDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYDQ 303
           PD+  +  ++  F  AG  ++AR++ +EMA  GVP + ITYN L+       ++ R  D 
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509

Query: 304 MQR----AGLQPDVVSYALLI 321
           ++     AG++PDVVSY ++I
Sbjct: 510 LREMTEDAGIEPDVVSYNIII 530

[Close]

BLAST of Carg24711 vs. TAIR10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 46.2 bits (108), Expect = 7.9e-05
Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 252 MIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMS---FETNYKEVSRIYDQMQ-RA 311
           +I ++ KAG +E A+K+F EM  R   +S +++N+L+S       +  V  +++++  + 
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174

Query: 312 GLQPDVVSYALLIGA 323
            ++PD+VSY  LI A
Sbjct: 175 SIKPDIVSYNTLIKA 189

[Close]

BLAST of Carg24711 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 45.8 bits (107), Expect = 1.0e-04
Identity = 23/83 (27.71%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 245 DQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETN---YKEVSRIY 304
           + K +  ++  + +  N EK+   F +M   G   S++TYN++M   TN   +++V ++ 
Sbjct: 125 NDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVL 184

Query: 305 DQMQRAGLQPDVVSYALLIGAYG 325
           ++M+   + PD  SY + I A+G
Sbjct: 185 EEMKEENVAPDNYSYRICINAFG 207

[Close]

BLAST of Carg24711 vs. TAIR10
Match: AT1G73710.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 45.1 bits (105), Expect = 1.8e-04
Identity = 24/75 (32.00%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 255 MFKKAGNYEKARKLFSEMAARGVPQSTITYNSLM---SFETNYKEVSRIYDQMQRAGLQP 314
           +F   G Y  A +   E+ +  +P+    YN+++   S   +     + Y +MQ  GL+P
Sbjct: 837 LFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEP 896

Query: 315 DVVSYALLIGAYGKA 327
           D+V+ A L+G YGKA
Sbjct: 897 DIVTQAYLVGIYGKA 911

[Close]

BLAST of Carg24711 vs. Swiss-Prot
Match: sp|Q9LYT2|PP287_ARATH (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX=3702 GN=At3g59040 PE=2 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-93
Identity = 242/330 (73.33%), Postives = 281/330 (85.15%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           M QA+I KP +SVP  N S+ + + + I+  V ++ R  V CMGML PRKFLQKR+K+EV
Sbjct: 1   MSQAVIFKPFVSVPSSNHSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIK-NEAIQKDLVLGTLVRFKQLKKWN 120
           FKDAADE +QK WR LM EIE TGSAV VL+  +   ++ + +DLVLGTLVRFKQLKKWN
Sbjct: 61  FKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWN 120

Query: 121 IVSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXX 180
           +VSEILEWLR Q+WWNFSE+D+LMLITAYGKLG FN AE+VL++++K G  PNV XXXXX
Sbjct: 121 LVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEG 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ++ 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKK 240

Query: 241 QVLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSR 300
             LKPDQKM+HMMIYM+KKAGNYEKARK+FS M  +GVPQST+TYNSLMSFET+YKEVS+
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 300

Query: 301 IYDQMQRAGLQPDVVSYALLIGAYGKARRE 330
           IYDQMQR+ +QPDVVSYALLI AYG+ARRE
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARRE 330

[Close]

BLAST of Carg24711 vs. Swiss-Prot
Match: sp|Q9SF38|PP222_ARATH (Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF152 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.3e-06
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 244 PDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRIYDQ 303
           PD+  +  ++  F  AG  ++AR++ +EMA  GVP + ITYN L+       ++ R  D 
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509

Query: 304 MQR----AGLQPDVVSYALLI 321
           ++     AG++PDVVSY ++I
Sbjct: 510 LREMTEDAGIEPDVVSYNIII 530

[Close]

BLAST of Carg24711 vs. TrEMBL
Match: tr|A0A1S3CNI8|A0A1S3CNI8_CUCME (pentatricopeptide repeat-containing protein At3g59040 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502487 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.1e-124
Identity = 510/581 (87.78%), Postives = 529/581 (91.05%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ LILKPV+S PLPNWSK QA+ HSISSNVNVR RLVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQTLILKPVVSAPLPNWSKLQAQTHSISSNVNVRRRLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQK WR+LMNEIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDAADEAEQKKWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR QSWWNFSEMD++MLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+  XXXX
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKE  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEKP 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHM+IYMFKKAGNYEKARK+F+EMAARGVPQ+T+TYNSLMSFETN       
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNXXXXXXX 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                           ALLI AYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXALLISAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSVEDXXXXXXXX 540
           XXXXXXXXXXXXILLSLA TAEEL+EANQLVGY +QSS+ +R GKFSRS+ D XXXXXXX
Sbjct: 481 XXXXXXXXXXXXILLSLAKTAEELEEANQLVGYSSQSSNPQRGGKFSRSIAD-XXXXXXX 540

Query: 541 XXXXADDVIHHNNQRDEKIILNGIHQ----QNLEGLCAKIC 578
           X    DDVIHH NQRDEKIILNGIHQ    QNLEGLCAKIC
Sbjct: 541 XLDYGDDVIHHTNQRDEKIILNGIHQRNLEQNLEGLCAKIC 580

[Close]

BLAST of Carg24711 vs. TrEMBL
Match: tr|A0A0A0L2Y5|A0A0A0L2Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G616760 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 7.8e-124
Identity = 508/581 (87.44%), Postives = 526/581 (90.53%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ LILKPV+S PLPNWSK QA+ HSISSNVNVR +LVVTCMGMLTPRKFLQKRKKLEV
Sbjct: 1   MPQTLILKPVVSAPLPNWSKLQAQTHSISSNVNVRRKLVVTCMGMLTPRKFLQKRKKLEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKD ADEAEQKNWR+LMNEIEETGSAVSVL+S RIKNEAI KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDEADEAEQKNWRRLMNEIEETGSAVSVLRSERIKNEAIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR QSWWNFSEMD++MLITAYGKLG+FNRAEKVLNLMNKKGYAPNV+  XXXX
Sbjct: 121 VSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKE  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEKP 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
           VLKPDQKMFHM+IYMFKKAGNYEKARK+F+EMAARGVPQ+T+TYNSLMSFETN       
Sbjct: 241 VLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNXXXXXXX 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
                           ALLI AYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXALLISAYGKARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXILLSLANTAEELDEANQLVGYPNQSSDAERAGKFSRSVEDXXXXXXXX 540
           XXXXXXXXXX  ILLSLA TAEELDEANQLVGY +QSS  +R GKFSRS+ D XXXXXXX
Sbjct: 481 XXXXXXXXXXKNILLSLAKTAEELDEANQLVGYSSQSSSPQRGGKFSRSIAD-XXXXXXX 540

Query: 541 XXXXADDVIHHNNQRDEKIILNGIHQ----QNLEGLCAKIC 578
           X   ADDVI H NQRDEKIILNGIHQ    QNLEGLCAKIC
Sbjct: 541 XLDYADDVIPHTNQRDEKIILNGIHQQNLEQNLEGLCAKIC 580

[Close]

BLAST of Carg24711 vs. TrEMBL
Match: tr|A0A2P5EVW3|A0A2P5EVW3_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_145030 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.5e-106
Identity = 260/329 (79.03%), Postives = 296/329 (89.97%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP +S PL NW KS    + I +N+ +R ++ V CMGML PRKFL+KRKK+EV
Sbjct: 1   MPQTLFLKPFVSAPLNNWRKSNVHTNCIDANIKMRRKMEVVCMGMLAPRKFLRKRKKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           F+DAADEA+QKNWR+LMN+IEETGSAV VLKS R+KN+ I KDLVLGTLVRFKQL+KW +
Sbjct: 61  FRDAADEADQKNWRRLMNDIEETGSAVEVLKSERMKNQEIPKDLVLGTLVRFKQLRKWKL 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWL+ Q+WW+FSEMD+LMLITAYGK+G+FNRAE+VL+LMNKKGYAP+VI XXXXX
Sbjct: 121 VSEILEWLKTQNWWDFSEMDFLMLITAYGKIGDFNRAERVLSLMNKKGYAPSVISXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LN +  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDKRS 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
            LKPDQKMFHMMIYM KKAG+YEKAR+LF+ MA RGVPQST+TYNSLMSFETNYKEVS+I
Sbjct: 241 ALKPDQKMFHMMIYMQKKAGSYEKARRLFALMAERGVPQSTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARRE 330
           YDQMQR+GL+PDV+SY+LLI AYGKARRE
Sbjct: 301 YDQMQRSGLKPDVISYSLLINAYGKARRE 329

[Close]

BLAST of Carg24711 vs. TrEMBL
Match: tr|A0A2P5C5W3|A0A2P5C5W3_PARAD (Tetratricopeptide-like helical domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_181120 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.5e-106
Identity = 259/329 (78.72%), Postives = 295/329 (89.67%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP++S PL NW KS    + I +N+ +R  + V CMGML PRKFL+KRKK+EV
Sbjct: 1   MPQTLFLKPLVSAPLNNWRKSNVHTNCIDANIKMRREMEVVCMGMLAPRKFLRKRKKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           F+DAADEA+QKNWR+LMN+IEETGSAV VLKS R+KN+ I KDLVLGTLVRFKQL+KW +
Sbjct: 61  FRDAADEADQKNWRRLMNDIEETGSAVEVLKSERMKNQEIPKDLVLGTLVRFKQLRKWKL 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VSEILEWLR Q+WW+FSEMD+LMLITAYGK+G+FNRAE+VL+LMNKKGYAP+VI XXXXX
Sbjct: 121 VSEILEWLRTQNWWDFSEMDFLMLITAYGKIGDFNRAERVLSLMNKKGYAPSVISXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LN +  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNDKRS 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
            LKPDQKMFHMMIYM KKAG+YEKAR+LF+ M  RGVPQST+TYNSLMSFETNYKEVS+I
Sbjct: 241 ALKPDQKMFHMMIYMQKKAGSYEKARRLFALMVERGVPQSTVTYNSLMSFETNYKEVSKI 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARRE 330
           YDQMQR+GL+PDV+SY+LL+ AYGKARRE
Sbjct: 301 YDQMQRSGLKPDVISYSLLVNAYGKARRE 329

[Close]

BLAST of Carg24711 vs. TrEMBL
Match: tr|M5WWZ9|M5WWZ9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa002772mg PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 5.3e-104
Identity = 262/329 (79.64%), Postives = 290/329 (88.15%), Query Frame = 0


Query: 1   MPQALILKPVISVPLPNWSKSQARRHSISSNVNVRGRLVVTCMGMLTPRKFLQKRKKLEV 60
           MPQ L LKP IS PL NWSK +A  +SI +NV VRGR+ V CMGML PRKFLQKRKK+EV
Sbjct: 1   MPQTLFLKPFISAPLDNWSKLKACTNSIGANVKVRGRVGVVCMGMLAPRKFLQKRKKVEV 60

Query: 61  FKDAADEAEQKNWRKLMNEIEETGSAVSVLKSGRIKNEAIQKDLVLGTLVRFKQLKKWNI 120
           FKDAADEAEQKNWR+LMNEIEETGSAVSVLKS R+K+  I KDLVLGTLVRFKQLKKWN+
Sbjct: 61  FKDAADEAEQKNWRRLMNEIEETGSAVSVLKSERLKDRTIPKDLVLGTLVRFKQLKKWNL 120

Query: 121 VSEILEWLRIQSWWNFSEMDYLMLITAYGKLGEFNRAEKVLNLMNKKGYAPNVIXXXXXX 180
           VS+ILEWL+ Q+WW+FS+MD+LMLITAYGK G FN AEKVL+LMN+KG  P+VI  XXXX
Sbjct: 121 VSQILEWLQTQNWWDFSKMDFLMLITAYGKQGHFNGAEKVLSLMNEKGIPPSVISHXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLNKEGQ 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 VLKPDQKMFHMMIYMFKKAGNYEKARKLFSEMAARGVPQSTITYNSLMSFETNYKEVSRI 300
             KPDQKMFHMMIYM+KK G+Y+KARK+F+ MA RGV QST+TYNSLMSFETNYKEVS++
Sbjct: 241 XXKPDQKMFHMMIYMYKKVGSYDKARKMFALMAERGVQQSTVTYNSLMSFETNYKEVSKM 300

Query: 301 YDQMQRAGLQPDVVSYALLIGAYGKARRE 330
           Y+QMQRAGL+PDVVSYALLI AYGKARRE
Sbjct: 301 YNQMQRAGLRPDVVSYALLISAYGKARRE 329

The following BLAST results are available for this feature:

BLAST of Carg24711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940074.1	7.1e-161	97.57	pentatricopeptide repeat-containing protein At3g59040 [Cucurbita moschata]	[more]
XP_023525762.1	5.1e-159	98.62	pentatricopeptide repeat-containing protein At3g59040 [Cucurbita pepo subsp. pep...	[more]
XP_022981156.1	1.5e-158	98.45	pentatricopeptide repeat-containing protein At3g59040 [Cucurbita maxima]	[more]
XP_022139934.1	1.5e-126	88.01	pentatricopeptide repeat-containing protein At3g59040 [Momordica charantia]	[more]
XP_008464650.1	3.1e-124	87.78	PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Cuc...	[more]

BLAST of Carg24711 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59040.2	1.4e-89	74.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G09650.1	1.3e-07	35.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G55890.1	7.9e-05	32.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	1.0e-04	27.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G73710.1	1.8e-04	32.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg24711 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LYT2\|PP287_ARATH	1.1e-93	73.33	Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SF38\|PP222_ARATH	2.3e-06	35.80	Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidop...	[more]

BLAST of Carg24711 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CNI8\|A0A1S3CNI8_CUCME	2.1e-124	87.78	pentatricopeptide repeat-containing protein At3g59040 isoform X1 OS=Cucumis melo...	[more]
tr\|A0A0A0L2Y5\|A0A0A0L2Y5_CUCSA	7.8e-124	87.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G616760 PE=4 SV=1	[more]
tr\|A0A2P5EVW3\|A0A2P5EVW3_9ROSA	1.5e-106	79.03	Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=...	[more]
tr\|A0A2P5C5W3\|A0A2P5C5W3_PARAD	2.5e-106	78.72	Tetratricopeptide-like helical domain containing protein OS=Parasponia andersoni...	[more]
tr\|M5WWZ9\|M5WWZ9_PRUPE	5.3e-104	79.64	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa002772mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24711-RA	Carg24711-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 141..168 e-value: 0.0012 score: 18.8 coord: 457..484 e-value: 0.024 score: 14.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 245..288 e-value: 1.3E-7 score: 31.6 coord: 171..218 e-value: 1.6E-8 score: 34.5 coord: 381..430 e-value: 1.5E-12 score: 47.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 385..418 e-value: 2.0E-5 score: 22.4 coord: 248..278 e-value: 1.8E-5 score: 22.6 coord: 456..487 e-value: 0.0015 score: 16.6 coord: 314..347 e-value: 4.8E-8 score: 30.7 coord: 350..383 e-value: 2.0E-6 score: 25.6 coord: 174..207 e-value: 1.5E-5 score: 22.9 coord: 419..452 e-value: 4.0E-7 score: 27.8 coord: 141..173 e-value: 9.6E-6 score: 23.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 299..358 e-value: 1.4E-12 score: 47.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 312..346 score: 12.912
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 137..171 score: 10.205
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 382..416 score: 11.038
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 452..486 score: 8.879
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 207..241 score: 7.728
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 417..451 score: 11.104
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..279 score: 10.304
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 172..206 score: 11.235
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 347..381 score: 10.665
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 221..293 e-value: 1.2E-12 score: 49.5 coord: 294..399 e-value: 1.4E-31 score: 111.3 coord: 78..220 e-value: 2.2E-23 score: 84.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 400..554 e-value: 7.6E-23 score: 83.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 122..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 511..541
None	No IPR available	PANTHER	PTHR24015:SF722	SUBFAMILY NOT NAMED	coord: 20..522
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 20..522

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24711	Cla023250	Watermelon (97103) v1	carwmB0638
Carg24711	Csa4G616760	Cucumber (Chinese Long) v2	carcuB0660
Carg24711	MELO3C026387	Melon (DHL92) v3.5.1	carmeB0637
Carg24711	ClCG11G016650	Watermelon (Charleston Gray)	carwcgB0621
Carg24711	CSPI04G21790	Wild cucumber (PI 183967)	carcpiB0669
Carg24711	Cucsa.058660	Cucumber (Gy14) v1	carcgyB0713
Carg24711	CmoCh01G013820	Cucurbita moschata (Rifu)	carcmoB0881
Carg24711	Lsi04G019020	Bottle gourd (USVL1VR-Ls)	carlsiB582
Carg24711	Cp4.1LG02g02610	Cucurbita pepo (Zucchini)	carcpeB0909
Carg24711	CsGy4G020310	Cucumber (Gy14) v2	carcgybB0636
Carg24711	MELO3C026387.2	Melon (DHL92) v3.6.1	carmedB0646
Carg24711	CsaV3_4G032160	Cucumber (Chinese Long) v3	carcucB0671
Carg24711	Cla97C11G222580	Watermelon (97103) v2	carwmbB0668
Carg24711	Bhi09G002983	Wax gourd	carwgoB0757

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24711	Silver-seed gourd	carcarB561
Carg24711	Cucurbita maxima (Rimu)	carcmaB0903
Carg24711	Cucurbita maxima (Rimu)	carcmaB0904
Carg24711	Cucurbita moschata (Rifu)	carcmoB0880
Carg24711	Cucurbita pepo (Zucchini)	carcpeB0910
Carg24711	Watermelon (Charleston Gray)	carwcgB0620
Carg24711	Watermelon (97103) v1	carwmB0637
Carg24711	Watermelon (97103) v2	carwmbB0667