MELO3C026195.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C026195.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Unknown protein
Location	chr02 : 26800200 .. 26800951 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACACGCCTTATCCAAATCCCAACAACAATCTCCATATTCAATACCATTGGAATCAGTACTACAAAAAAGCCTTCTTACATTTCCAATTCTAGTTCCAACCATCCTCCTTCTTCTTCTTCACCCACAATAATGCTCCCCTTCTCTCAACAAGAAGAGGATGAACTCATCTCCTCCCTCAACCGCCATGGCACTCCACCCTCCAACTGGAAAATCCGAACCAACCAATTGGCTTACGACGACATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGTAACTTGAAGGGTCGAAGACTCTCTTACGATGATGCCGTCGACATGTCTCTCCACCTAAAGAATACCGACTTCTTACATGGGGATTACTTGGATGAGTTCCCTGATCAGGATGATCAGATCATAATTCAGTCGTCATCCGATTCGGGGGAAGAAAAAGCAGAGCAAGTTCCTGTTTGTTTAAATGCCCTGTCTTATTCCTGTGCCTCATCTTCTTCTTCTTCTTCTTCTTCGGGGCAATTGGTTCCTCCGCAAACGAAAGAAGAAATGGCAGCCAAGGCAAAGGTAGAAGAAAATGTGACGGCGATTGTTGGTGAGAAGAAGATGGAAACTTGGAATGGGTGCAAAATAGGGAAATGGAAAGTGGGTTTAGCTTGGCTTGCTGTTGCTTCGGTTCCTATGGTTGTATTTTCACTACGTTGTTTATGGTTCCATGATGAGGACGAACAATTCCCATTTCTTTTAGTTCCGACTTGA

mRNA sequence

GAACACGCCTTATCCAAATCCCAACAACAATCTCCATATTCAATACCATTGGAATCAGTACTACAAAAAAGCCTTCTTACATTTCCAATTCTAGTTCCAACCATCCTCCTTCTTCTTCTTCACCCACAATAATGCTCCCCTTCTCTCAACAAGAAGAGGATGAACTCATCTCCTCCCTCAACCGCCATGGCACTCCACCCTCCAACTGGAAAATCCGAACCAACCAATTGGCTTACGACGACATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGTAACTTGAAGGGTCGAAGACTCTCTTACGATGATGCCGTCGACATGTCTCTCCACCTAAAGAATACCGACTTCTTACATGGGGATTACTTGGATGAGTTCCCTGATCAGGATGATCAGATCATAATTCAGTCGTCATCCGATTCGGGGGAAGAAAAAGCAGAGCAAGTTCCTGTTTGTTTAAATGCCCTGTCTTATTCCTGTGCCTCATCTTCTTCTTCTTCTTCTTCTTCGGGGCAATTGGTTCCTCCGCAAACGAAAGAAGAAATGGCAGCCAAGGCAAAGGTAGAAGAAAATGTGACGGCGATTGTTGGTGAGAAGAAGATGGAAACTTGGAATGGGTGCAAAATAGGGAAATGGAAAGTGGGTTTAGCTTGGCTTGCTGTTGCTTCGGTTCCTATGGTTGTATTTTCACTACGTTGTTTATGGTTCCATGATGAGGACGAACAATTCCCATTTCTTTTAGTTCCGACTTGA

Coding sequence (CDS)

ACACGCCTTATCCAAATCCCAACAACAATCTCCATATTCAATACCATTGGAATCAGTACTACAAAAAAGCCTTCTTACATTTCCAATTCTAGTTCCAACCATCCTCCTTCTTCTTCTTCACCCACAATAATGCTCCCCTTCTCTCAACAAGAAGAGGATGAACTCATCTCCTCCCTCAACCGCCATGGCACTCCACCCTCCAACTGGAAAATCCGAACCAACCAATTGGCTTACGACGACATTCGTAGAGAACGAAGGGCCGCCATTGCTAGCGGTAACTTGAAGGGTCGAAGACTCTCTTACGATGATGCCGTCGACATGTCTCTCCACCTAAAGAATACCGACTTCTTACATGGGGATTACTTGGATGAGTTCCCTGATCAGGATGATCAGATCATAATTCAGTCGTCATCCGATTCGGGGGAAGAAAAAGCAGAGCAAGTTCCTGTTTGTTTAAATGCCCTGTCTTATTCCTGTGCCTCATCTTCTTCTTCTTCTTCTTCTTCGGGGCAATTGGTTCCTCCGCAAACGAAAGAAGAAATGGCAGCCAAGGCAAAGGTAGAAGAAAATGTGACGGCGATTGTTGGTGAGAAGAAGATGGAAACTTGGAATGGGTGCAAAATAGGGAAATGGAAAGTGGGTTTAGCTTGGCTTGCTGTTGCTTCGGTTCCTATGGTTGTATTTTCACTACGTTGTTTATGGTTCCATGATGAGGACGAACAATTCCCATTTCTTTTAGTTCCGACTTGA

Protein sequence

TRLIQIPTTISIFNTIGISTTKKPSYISNSSSNHPPSSSSPTIMLPFSQQEEDELISSLNRHGTPPSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAVDMSLHLKNTDFLHGDYLDEFPDQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCASSSSSSSSSGQLVPPQTKEEMAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMVVFSLRCLWFHDEDEQFPFLLVPT

Homology

[Close]

BLAST of MELO3C026195.2 vs. NCBI nr
Match: KGN63472.1 (hypothetical protein Csa_1G001440 [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 3.5e-64
Identity = 136/194 (70.10%), Postives = 147/194 (75.77%), Query Frame = 0


Query: 56  ISSLNRHGTPPSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAVDMSLHLKNTD 115
           IS+LNRH TP S+WKIRTNQLAY++IR ERRAAIASGNLK RRLSYDDA+DMSLHL    
Sbjct: 14  ISTLNRHATPSSSWKIRTNQLAYEEIRTERRAAIASGNLKARRLSYDDAIDMSLHLNTNF 73

Query: 116 FLHGDYLDEFPDQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCXXXXXXXXXXXXXXXX 175
            LHGDYLDE P  DDQ+I   SSD GEEKAEQ  VCLNALSYSC                
Sbjct: 74  LLHGDYLDESPQDDDQMI--PSSDPGEEKAEQ--VCLNALSYSC---ASSSSSSGKFVPL 133

Query: 176 XXXXXXAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMVVFSLRCLWF 235
                 AAKA+VEENV A+VGE KMET NGCKIG WKVGLA LA+ASVPMV+FSLRCL  
Sbjct: 134 QMKEQMAAKAEVEENVRAVVGEIKMETRNGCKIGNWKVGLACLAIASVPMVIFSLRCLGL 193

Query: 236 HDEDEQFPFLLVPT 250
           HDE+EQFPFLLVPT
Sbjct: 194 HDEEEQFPFLLVPT 200

[Close]

BLAST of MELO3C026195.2 vs. NCBI nr
Match: XP_009359404.1 (PREDICTED: uncharacterized protein LOC103949989 [Pyrus x bretschneideri])

HSP 1 Score: 55.5 bits (132), Expect = 3.1e-04
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 61  RHGTPPS---NWKIRTNQLAYDDIRRERRAAIASGNLKGRRL 100
           +HG  PS    WK+R+N LA ++IRRERRAAI SG LKGRRL
Sbjct: 78  QHGVSPSEGGEWKVRSNDLAVEEIRRERRAAIESGRLKGRRL 119

[Close]

BLAST of MELO3C026195.2 vs. NCBI nr
Match: XP_007208917.1 (uncharacterized protein LOC18776535 [Prunus persica])

HSP 1 Score: 54.7 bits (130), Expect = 5.3e-04
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 56  ISSLNRHGTPPS--NWKIRTNQLAYDDIRRERRAAIASGNLKGRRL 100
           +SSL +HG  PS   W++RTN L  ++IRRERRAAI SG LKGRRL
Sbjct: 77  MSSL-QHGLSPSQGEWRVRTNDLVVEEIRRERRAAIESGKLKGRRL 121

[Close]

BLAST of MELO3C026195.2 vs. NCBI nr
Match: ONI07944.1 (hypothetical protein PRUPE_5G148800 [Prunus persica])

HSP 1 Score: 54.7 bits (130), Expect = 5.3e-04
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 56  ISSLNRHGTPPS--NWKIRTNQLAYDDIRRERRAAIASGNLKGRRL 100
           +SSL +HG  PS   W++RTN L  ++IRRERRAAI SG LKGRRL
Sbjct: 66  MSSL-QHGLSPSQGEWRVRTNDLVVEEIRRERRAAIESGKLKGRRL 110

[Close]

BLAST of MELO3C026195.2 vs. NCBI nr
Match: XP_021818298.1 (uncharacterized protein LOC110760357 [Prunus avium])

HSP 1 Score: 54.7 bits (130), Expect = 5.3e-04
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 56  ISSLNRHGTPPS--NWKIRTNQLAYDDIRRERRAAIASGNLKGRRL 100
           +SSL +HG  PS   W++RTN L  ++IRRERRAAI SG LKGRRL
Sbjct: 77  MSSL-QHGLSPSQGEWRVRTNDLVVEEIRRERRAAIESGKLKGRRL 121

[Close]

BLAST of MELO3C026195.2 vs. TrEMBL
Match: tr|A0A0A0LRR5|A0A0A0LRR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001440 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 136/194 (70.10%), Postives = 147/194 (75.77%), Query Frame = 0


Query: 56  ISSLNRHGTPPSNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAVDMSLHLKNTD 115
           IS+LNRH TP S+WKIRTNQLAY++IR ERRAAIASGNLK RRLSYDDA+DMSLHL    
Sbjct: 14  ISTLNRHATPSSSWKIRTNQLAYEEIRTERRAAIASGNLKARRLSYDDAIDMSLHLNTNF 73

Query: 116 FLHGDYLDEFPDQDDQIIIQSSSDSGEEKAEQVPVCLNALSYSCXXXXXXXXXXXXXXXX 175
            LHGDYLDE P  DDQ+I   SSD GEEKAEQ  VCLNALSYSC                
Sbjct: 74  LLHGDYLDESPQDDDQMI--PSSDPGEEKAEQ--VCLNALSYSC---ASSSSSSGKFVPL 133

Query: 176 XXXXXXAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMVVFSLRCLWF 235
                 AAKA+VEENV A+VGE KMET NGCKIG WKVGLA LA+ASVPMV+FSLRCL  
Sbjct: 134 QMKEQMAAKAEVEENVRAVVGEIKMETRNGCKIGNWKVGLACLAIASVPMVIFSLRCLGL 193

Query: 236 HDEDEQFPFLLVPT 250
           HDE+EQFPFLLVPT
Sbjct: 194 HDEEEQFPFLLVPT 200

[Close]

BLAST of MELO3C026195.2 vs. TrEMBL
Match: tr|A0A2N9END5|A0A2N9END5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4092 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-06
Identity = 51/191 (26.70%), Postives = 80/191 (41.88%), Query Frame = 0


Query: 64  TPP--SNWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAVDMSLHLKNTDFLHGDY 123
           +PP   NWK+RTN LA D+I RER   I SG LKGRRL      +  +  +  D +    
Sbjct: 10  SPPRGGNWKVRTNDLAMDEIYRERLEVIESGRLKGRRLFEGVEGETEMGFEGADKICNGL 69

Query: 124 LDEFPDQDDQIIIQSSSDSGEEKAEQVPVCLN---ALSYSCXXXXXXXXXXXXXXXXXXX 183
           +     Q+ ++   S  DS ++  E  P  ++    +S+ C                   
Sbjct: 70  V-----QESEVRSVSFCDSDDDHHENEPGGISNVLPVSFQC------CSSSSSSPSLCDE 129

Query: 184 XXXAAKAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMVVFSLRCLWFHDE 243
                  + E+ V A V  +K+         KW V + WLA+AS+   +  +    F   
Sbjct: 130 YVEGEVLEEEKKVVASVEMRKVSYGGSGNGRKWMVVMGWLAIASIVFAICIVPMRRFGGY 189

Query: 244 DEQFPFLLVPT 250
            ++   +LVPT
Sbjct: 190 GDEHEMILVPT 189

[Close]

BLAST of MELO3C026195.2 vs. TrEMBL
Match: tr|A0A251P8N1|A0A251P8N1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G148800 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-04
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 56  ISSLNRHGTPPS--NWKIRTNQLAYDDIRRERRAAIASGNLKGRRL 100
           +SSL +HG  PS   W++RTN L  ++IRRERRAAI SG LKGRRL
Sbjct: 66  MSSL-QHGLSPSQGEWRVRTNDLVVEEIRRERRAAIESGKLKGRRL 110

[Close]

BLAST of MELO3C026195.2 vs. TrEMBL
Match: tr|M5W9W6|M5W9W6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa1027141mg PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-04
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0


Query: 56  ISSLNRHGTPPS--NWKIRTNQLAYDDIRRERRAAIASGNLKGRRL 100
           +SSL +HG  PS   W++RTN L  ++IRRERRAAI SG LKGRRL
Sbjct: 77  MSSL-QHGLSPSQGEWRVRTNDLVVEEIRRERRAAIESGKLKGRRL 121

[Close]

BLAST of MELO3C026195.2 vs. TrEMBL
Match: tr|A0A2P6P4T9|A0A2P6P4T9_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0189791 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-04
Identity = 48/186 (25.81%), Postives = 82/186 (44.09%), Query Frame = 0


Query: 68  NWKIRTNQLAYDDIRRERRAAIASGNLKGRRLSYDDAVDMSLHLKNTDFLHGDYLDEFPD 127
           NW +RTN LA ++IRR+RRAAI SG LKGRRL  D+  +  +     +           +
Sbjct: 75  NWNVRTNDLAVEEIRRDRRAAIESGKLKGRRLFEDEHEETEIGYGGEESXXXXXXXXXXE 134

Query: 128 QDDQIIIQSSSDSGEE----KAEQVPVCLNALSYSCXXXXXXXXXXXXXXXXXXXXXXAA 187
            + + +    S  GEE    K++++ VC      S                         
Sbjct: 135 SEVRSLPLCGS-GGEEVESGKSKEIKVCFQDSISS-----------------LTSSPCGE 194

Query: 188 KAKVEENVTAIVGEKKMETWNGCKIGKWKVGLAWLAVASVPMVVFSLRCLWFHDEDEQFP 247
           K K EE +  +  ++ +E   G  +    V +  +A+A++   + S+  L+ +  +E + 
Sbjct: 195 KMKEEEKLVTVEEKEVVENKGGNWVRCIVVIMPVIAIAALIFAICSITGLYGYG-NEHYE 241

Query: 248 FLLVPT 250
            +LVPT
Sbjct: 255 LILVPT 241

The following BLAST results are available for this feature:

BLAST of MELO3C026195.2 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63472.1	3.5e-64	70.10	hypothetical protein Csa_1G001440 [Cucumis sativus]	[more]
XP_009359404.1	3.1e-04	64.29	PREDICTED: uncharacterized protein LOC103949989 [Pyrus x bretschneideri]	[more]
XP_007208917.1	5.3e-04	63.04	uncharacterized protein LOC18776535 [Prunus persica]	[more]
ONI07944.1	5.3e-04	63.04	hypothetical protein PRUPE_5G148800 [Prunus persica]	[more]
XP_021818298.1	5.3e-04	63.04	uncharacterized protein LOC110760357 [Prunus avium]	[more]

BLAST of MELO3C026195.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C026195.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C026195.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRR5\|A0A0A0LRR5_CUCSA	2.3e-64	70.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001440 PE=4 SV=1	[more]
tr\|A0A2N9END5\|A0A2N9END5_FAGSY	2.9e-06	26.70	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4092 PE=4 SV=1	[more]
tr\|A0A251P8N1\|A0A251P8N1_PRUPE	3.5e-04	63.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G148800 PE=4 SV=1	[more]
tr\|M5W9W6\|M5W9W6_PRUPE	3.5e-04	63.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa1027141mg PE=4 SV=...	[more]
tr\|A0A2P6P4T9\|A0A2P6P4T9_ROSCH	3.5e-04	25.81	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0189791 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C026195.2.1	MELO3C026195.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C026195.2	Csa1G001440	Cucumber (Chinese Long) v2	cumedB046
MELO3C026195.2	CSPI01G00430	Wild cucumber (PI 183967)	cpimedB049
MELO3C026195.2	Lsi06G016520	Bottle gourd (USVL1VR-Ls)	lsimedB419
MELO3C026195.2	Cp4.1LG18g09090	Cucurbita pepo (Zucchini)	cpemedB386
MELO3C026195.2	CsGy1G000440	Cucumber (Gy14) v2	cgybmedB043
MELO3C026195.2	Cla019287	Watermelon (97103) v1	medwmB283
MELO3C026195.2	ClCG06G018030	Watermelon (Charleston Gray)	medwcgB246
MELO3C026195.2	Cla97C06G127770	Watermelon (97103) v2	medwmbB247
MELO3C026195.2	Bhi02G000507	Wax gourd	medwgoB308
MELO3C026195.2	CsaV3_1G000440	Cucumber (Chinese Long) v3	cucmedB050

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C026195.2	Silver-seed gourd	carmedB0375
MELO3C026195.2	Silver-seed gourd	carmedB0618
MELO3C026195.2	Cucumber (Chinese Long) v3	cucmedB048
MELO3C026195.2	Cucumber (Chinese Long) v3	cucmedB187
MELO3C026195.2	Watermelon (97103) v2	medwmbB233
MELO3C026195.2	Wax gourd	medwgoB282
MELO3C026195.2	Cucurbita moschata (Rifu)	cmomedB117
MELO3C026195.2	Cucumber (Gy14) v2	cgybmedB041
MELO3C026195.2	Cucumber (Gy14) v2	cgybmedB163
MELO3C026195.2	Cucumber (Gy14) v1	cgymedB263
MELO3C026195.2	Cucurbita maxima (Rimu)	cmamedB068
MELO3C026195.2	Cucurbita maxima (Rimu)	cmamedB119
MELO3C026195.2	Cucurbita maxima (Rimu)	cmamedB129
MELO3C026195.2	Cucurbita maxima (Rimu)	cmamedB228
MELO3C026195.2	Cucurbita maxima (Rimu)	cmamedB253
MELO3C026195.2	Cucurbita moschata (Rifu)	cmomedB060
MELO3C026195.2	Cucurbita moschata (Rifu)	cmomedB120
MELO3C026195.2	Cucurbita moschata (Rifu)	cmomedB214
MELO3C026195.2	Cucurbita moschata (Rifu)	cmomedB235
MELO3C026195.2	Cucurbita moschata (Rifu)	cmomedB416
MELO3C026195.2	Cucurbita pepo (Zucchini)	cpemedB041
MELO3C026195.2	Cucurbita pepo (Zucchini)	cpemedB569
MELO3C026195.2	Cucurbita pepo (Zucchini)	cpemedB669
MELO3C026195.2	Cucurbita pepo (Zucchini)	cpemedB727
MELO3C026195.2	Cucurbita pepo (Zucchini)	cpemedB739
MELO3C026195.2	Wild cucumber (PI 183967)	cpimedB046
MELO3C026195.2	Wild cucumber (PI 183967)	cpimedB183
MELO3C026195.2	Cucumber (Chinese Long) v2	cumedB043
MELO3C026195.2	Cucumber (Chinese Long) v2	cumedB183
MELO3C026195.2	Melon (DHL92) v3.6.1	medmedB065
MELO3C026195.2	Bottle gourd (USVL1VR-Ls)	lsimedB214
MELO3C026195.2	Watermelon (Charleston Gray)	medwcgB236
MELO3C026195.2	Watermelon (Charleston Gray)	medwcgB244
MELO3C026195.2	Watermelon (97103) v1	medwmB259