MELO3C025617.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C025617.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	E3 SUMO-protein ligase MMS21
Location	chr07 : 5053968 .. 5057028 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGTCATTGTAGTGAATAGAAAAAGAGTGAGGAAATATTATCTAAAATAGGCGTGCCTTTCCCCTCTATCGACGGATTTTCAAAACTCCGGGCGATTTTGTTTCCTCAAGCGGGTATTCTATATTTTCCCGCTCTAGCAATAGTTTCTGTTTCGAGAATCTCTTTTTCGAACGAATGGCATCCGCTTCCGATTCTCGATCTACCGGCGTCACCGGCAGAATCAAATCCGCCGCCACCATTATGCACTCCGAGAACCAATCCCTCCTTGCAGTAACTTGCTTAATACTACCCTCTTACTTTACTTCTATCTCTGCTTTCAATTTCTTCTTCGAGAAAATGAAGTTGTTGCTAAATAAACCTTGTTTTTAGCTTTAACATCTACATTTCGTGTTAGTTCACATGCGGTATTCCCTTCATTTTGCGCTTTGAACTGGGGTTTCCTAGATTTCTAAATGCTGAAACGTCCGGGTCGAGATTATCCTATTGAAAACAATGATTCATAAGGAATTTAACTAATGAATGATGATGATGGGTTATCTGTTAATTTTTTGTGATTGGATTTTATTGTCTTAATTTCAGGAATTGCGGAAGACGCTGATTATGATGAAGGAAATTGGGGTGGATTTGGAGAAGGAAAATCAGAACAAGATGGTATTGTGAATGATGGACCTTAATTTCGAGCATCACAAATGATTTCCATTTGTTACTTAGAAAAAGAATGTTGTTGGATTAGGATTAGATCTTGTAATAAAATACTAAGAAGTAAAGTCTACATAAATTTCAAATATGTTCTTAGGATTCTAACATTTTAGGAGTTTTTTTTTTCCTTAGTTAATTGAAAATGAAATAGCAGATTGTATGCAACATGCTGCACATATATCTTGTTGGGACTTTCATTATAAACCAGCCACTTTGTCGAACCGTTCAAAATTCAAATATTTGTAATTTTTATTTCCATTTGGTGATTTTGCTACGCACATACATTTTTGTTTTTGACCCACTTTCTGTGGATGCCACGATATGTATAAGATTTATTGAACTGAATCCTTGTTTAAAAATTTTGATATTGGTTTCAGTAGGTTTACATTTATCTAATTTCTATACCATGTGCACTTTTTGGTGGATTTTCTGCTTCTGTCTATTAGATCCAATCTATGGGTAATTGTGAATCAGTGTTGATTGGAACTCTTAACCAATGATTTTAGGTCAAGGAGCTTGAAAAATCTATGGTTGAGCTGTTGAGTGCTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTGGAAATACATATGAACCAAAAGAAGAGGTGCTTGAATCTCTTTCCATGCTGAATTTTCCACTACACATTCTTTTCTTAATTTTCATCGTGTGGGTTCCTTCCTTTCCAGATGTAATATTTATATTTTATGTTGTTATGAAGTTGACAGATTTTGAGAAACTACTTGATGATGAAGTTGCAAAAGTGAGCGTAAATTCATCTTCAAATTTTGCGAACCATCCTATAATTCGGCAATTTAGAGAAGCTATTTGGGTATGCATCTTCATCTCCTTTTCTATGGTCTAGGAAGGGCCTTGGCACCCAGAAAAAAATAGATCAGAAAGCTAGGGGACAATATTTCCCTTTTCTTATCGGATCGGATTATGCAATAACTAGCCTGAAACTGTGAAAATGCTCAAAAGACAGTACATGAGTAGTAAAGAAGAGAAACTATTATACCTTTTTCTTGCAATTTCCAAATGTTTAGGAAGCATTTTATTGATCTTCCAATTGTAGATTTAGTTTTTTCCAATACTTTAGCCTATCTCCACGCTATTCCTGCAGAATGTTCACCATGCAGGACAACCAATGGCAGGTGAGGAGCAGGAAGACGTTGTGATGACCAGTACGCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGCAGAACCCGTTCGCAGGTACATTGCAACTAAATATATTATGATAAAGGATAAAGAATTGGAATTCTTTCTGTTACTAGTGAAAAAGAAGTCTGCCGGTCCATCCGGTGTGCTACTTTGATGTAGGTGCATGAAAAATGAAAATGGACTAGTCTGCTACTTTGATCTTCTTTTTCCTCTTCTTCTTATGTTACAGATCTGTCTTTAAATTATACTTTTTGTTCTTTGTACAAGTAATTGTTTTAGGTTGTGGAGAAGGTACATTCCCATGGATTTGGCCTTCTTGTTTTCTATTTTTCTATGGTTTCTGTTATGGATCAGTACAAGCGTGGGACATAGTGCATTTAAGCACTTTTATTAAGTCTCTTTATGTCTCTACCTTATGCAATTTGTAGTGCGGAATGCAAGCACATATACGAAAAGGCAGCCATAATGCAGTACCTTAATTCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGGTATTCGGATCTACCGCATTAGATATACTAATACAGAATGTTTACATTGACTTGTGTCACTTGACCTCTCTGTCTTTACAGCCTGTCCTAAGATGTTGCAGCCCGATAAGGTTGTGCTTGATCCATTCTTAGAGATTGAAATCGATGAACTACGAAAGATGTCTAGGCATTCTGAGAGAATACAGGACTTCACAGAGCTTGATGCAGATTAACCACTGAATTACTTTCTTTTCCTTTTTTATATTTTGTTGTGTTTATTGGCATTGTCGCCGTCGGTCGTAGGGGTCAGTCTCTGGATCAAATGTTTTGGTTGGTAAGTTGAGGTAGTTGAGATGTATATGGTGGTATCTATAGTTTGTCTATATCGTCTCGAGTTGAATGGAGAAGTGTGGCTTCATTGACAAATTGTCATTGCCCTTTATATGTTGAATAAAAAATGGTGGTATGTACATTAAATTTGTGGCATTAATCAAAATAAAACAAACTACATTTTATTCATTTCATGGAGTAAAATGTAAAGCTTAGGGGCAATTGATTTTTTTGGCTCCATGAAGTCTTATTTTGGGAAAAGAGACCCTTTTGAAAACCAATTTATATGGTGATATTTTAAAATTAACTTTGCC

mRNA sequence

TTTTGGTCATTGTAGTGAATAGAAAAAGAGTGAGGAAATATTATCTAAAATAGGCGTGCCTTTCCCCTCTATCGACGGATTTTCAAAACTCCGGGCGATTTTGTTTCCTCAAGCGGGTATTCTATATTTTCCCGCTCTAGCAATAGTTTCTGTTTCGAGAATCTCTTTTTCGAACGAATGGCATCCGCTTCCGATTCTCGATCTACCGGCGTCACCGGCAGAATCAAATCCGCCGCCACCATTATGCACTCCGAGAACCAATCCCTCCTTGCAGAATTGCGGAAGACGCTGATTATGATGAAGGAAATTGGGGTGGATTTGGAGAAGGAAAATCAGAACAAGATGGTCAAGGAGCTTGAAAAATCTATGGTTGAGCTGTTGAGTGCTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTGGAAATACATATGAACCAAAAGAAGAGTTGACAGATTTTGAGAAACTACTTGATGATGAAGTTGCAAAAGTGAGCGTAAATTCATCTTCAAATTTTGCGAACCATCCTATAATTCGGCAATTTAGAGAAGCTATTTGGCCTATCTCCACGCTATTCCTGCAGAATGTTCACCATGCAGGACAACCAATGGCAGGTGAGGAGCAGGAAGACGTTGTGATGACCAGTACGCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGCAGAACCCGTTCGCAGTGCGGAATGCAAGCACATATACGAAAAGGCAGCCATAATGCAGTACCTTAATTCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGCCTGTCCTAAGATGTTGCAGCCCGATAAGGTTGTGCTTGATCCATTCTTAGAGATTGAAATCGATGAACTACGAAAGATGTCTAGGCATTCTGAGAGAATACAGGACTTCACAGAGCTTGATGCAGATTAACCACTGAATTACTTTCTTTTCCTTTTTTATATTTTGTTGTGTTTATTGGCATTGTCGCCGTCGGTCGTAGGGGTCAGTCTCTGGATCAAATGTTTTGGTTGGTAAGTTGAGGTAGTTGAGATGTATATGGTGGTATCTATAGTTTGTCTATATCGTCTCGAGTTGAATGGAGAAGTGTGGCTTCATTGACAAATTGTCATTGCCCTTTATATGTTGAATAAAAAATGGTGGTATGTACATTAAATTTGTGGCATTAATCAAAATAAAACAAACTACATTTTATTCATTTCATGGAGTAAAATGTAAAGCTTAGGGGCAATTGATTTTTTTGGCTCCATGAAGTCTTATTTTGGGAAAAGAGACCCTTTTGAAAACCAATTTATATGGTGATATTTTAAAATTAACTTTGCC

Coding sequence (CDS)

ATGGCATCCGCTTCCGATTCTCGATCTACCGGCGTCACCGGCAGAATCAAATCCGCCGCCACCATTATGCACTCCGAGAACCAATCCCTCCTTGCAGAATTGCGGAAGACGCTGATTATGATGAAGGAAATTGGGGTGGATTTGGAGAAGGAAAATCAGAACAAGATGGTCAAGGAGCTTGAAAAATCTATGGTTGAGCTGTTGAGTGCTTATGAAAACTGTAACAACTTTTCATCTGCAATTCAGTCGGTTGGAAATACATATGAACCAAAAGAAGAGTTGACAGATTTTGAGAAACTACTTGATGATGAAGTTGCAAAAGTGAGCGTAAATTCATCTTCAAATTTTGCGAACCATCCTATAATTCGGCAATTTAGAGAAGCTATTTGGCCTATCTCCACGCTATTCCTGCAGAATGTTCACCATGCAGGACAACCAATGGCAGGTGAGGAGCAGGAAGACGTTGTGATGACCAGTACGCAGTGTAATCTATTGAATGTCACTTGCCCGTTAAGTGGAAAGCCTGTCACTGAATTAGCAGAACCCGTTCGCAGTGCGGAATGCAAGCACATATACGAAAAGGCAGCCATAATGCAGTACCTTAATTCCAAGAAATCTCGCGCTCAATGCCCGGTTGCAGCCTGTCCTAAGATGTTGCAGCCCGATAAGGTTGTGCTTGATCCATTCTTAGAGATTGAAATCGATGAACTACGAAAGATGTCTAGGCATTCTGAGAGAATACAGGACTTCACAGAGCTTGATGCAGATTAA

Protein sequence

MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQDFTELDAD

Homology

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BLAST of MELO3C025617.2 vs. NCBI nr
Match: XP_008463706.1 (PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 2.9e-130
Identity = 248/256 (96.88%), Postives = 248/256 (96.88%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           IIRQFREAIW        NVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA
Sbjct: 121 IIRQFREAIW--------NVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM
Sbjct: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240

Query: 241 SRHSERIQDFTELDAD 257
           SRHSERIQDFTELDAD
Sbjct: 241 SRHSERIQDFTELDAD 248

[Close]

BLAST of MELO3C025617.2 vs. NCBI nr
Match: XP_004146042.1 (PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis sativus] >KGN55097.1 hypothetical protein Csa_4G628940 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 2.3e-124
Identity = 239/256 (93.36%), Postives = 242/256 (94.53%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHS+NQSLLAELRKTLIMMKEIGVDLEKE Q KMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKS+VELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVS +SSSNFANHP
Sbjct: 61  EKSIVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSSNFANHP 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           IIRQFREAIW        NVHHAGQ MAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA
Sbjct: 121 IIRQFREAIW--------NVHHAGQAMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRS ECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM
Sbjct: 181 EPVRSVECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240

Query: 241 SRHSERIQDFTELDAD 257
           SRHS RIQDFTELDAD
Sbjct: 241 SRHSGRIQDFTELDAD 248

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BLAST of MELO3C025617.2 vs. NCBI nr
Match: XP_022941288.1 (E3 SUMO-protein ligase MMS21 [Cucurbita moschata])

HSP 1 Score: 406.0 bits (1042), Expect = 9.6e-110
Identity = 210/256 (82.03%), Postives = 228/256 (89.06%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGV+LE++NQ++MVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVELERDNQSRMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLDDEVAKVS NSSSN  NH 
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           IIRQFREAIW        NVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA
Sbjct: 121 IIRQFREAIW--------NVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRS ECKH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK 
Sbjct: 181 EPVRSTECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKT 240

Query: 241 SRHSERIQDFTELDAD 257
           S+HS RIQDFTE+DAD
Sbjct: 241 SKHSVRIQDFTEVDAD 248

[Close]

BLAST of MELO3C025617.2 vs. NCBI nr
Match: XP_023525588.1 (E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109
Identity = 210/256 (82.03%), Postives = 228/256 (89.06%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLE++NQ++MVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVS NSSSN  NH 
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           IIRQFREAIW        NVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA
Sbjct: 121 IIRQFREAIW--------NVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRS ECKH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK 
Sbjct: 181 EPVRSTECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKT 240

Query: 241 SRHSERIQDFTELDAD 257
           S+HS RIQDFTE+DAD
Sbjct: 241 SKHSVRIQDFTEVDAD 248

[Close]

BLAST of MELO3C025617.2 vs. NCBI nr
Match: XP_022981951.1 (E3 SUMO-protein ligase MMS21 [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 6.2e-109
Identity = 209/254 (82.28%), Postives = 227/254 (89.37%), Query Frame = 0


Query: 3   SASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEK 62
           S S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLE++NQ++MVKELE 
Sbjct: 5   SNSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKELEN 64

Query: 63  SMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPII 122
           S+VELLS YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVS NSSSN  NH II
Sbjct: 65  SVVELLSTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHSII 124

Query: 123 RQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEP 182
           RQFREAIW        NVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEP
Sbjct: 125 RQFREAIW--------NVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEP 184

Query: 183 VRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSR 242
           VRS ECKH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+
Sbjct: 185 VRSTECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSK 244

Query: 243 HSERIQDFTELDAD 257
           HS RIQDFTE+DAD
Sbjct: 245 HSVRIQDFTEVDAD 250

[Close]

BLAST of MELO3C025617.2 vs. TAIR10
Match: AT3G15150.1 (RING/U-box superfamily protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-70
Identity = 137/252 (54.37%), Postives = 181/252 (71.83%), Query Frame = 0


Query: 4   ASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKS 63
           AS S S GV GRI++A+ ++ S+N S LA++RK + MMK I V LEKENQ   VK+LE S
Sbjct: 2   ASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENS 61

Query: 64  MVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIR 123
           + ELL  + +CN+ S+AIQSV N Y+P E+LTDF+KLLDDE  K+    SS   N  ++R
Sbjct: 62  VAELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMR 121

Query: 124 QFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPV 183
           QFREA+W        NVHHAG+PM G++ ED+VMTSTQC LLN+TCPLSGKPVTELA+PV
Sbjct: 122 QFREAVW--------NVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPV 181

Query: 184 RSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRH 243
           RS +C+H+YEK+ I+ Y+ +  + A CPVA C   LQ  KV+ D  L+ EI+E+R +++ 
Sbjct: 182 RSMDCRHVYEKSVILHYIVNNPN-ANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQ 241

Query: 244 SER---IQDFTE 253
           S R   I+DFTE
Sbjct: 242 SNRAEVIEDFTE 244

[Close]

BLAST of MELO3C025617.2 vs. Swiss-Prot
Match: sp|Q8GYH7|NSE2_ARATH (E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 3.3e-69
Identity = 137/252 (54.37%), Postives = 181/252 (71.83%), Query Frame = 0


Query: 4   ASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKELEKS 63
           AS S S GV GRI++A+ ++ S+N S LA++RK + MMK I V LEKENQ   VK+LE S
Sbjct: 2   ASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENS 61

Query: 64  MVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHPIIR 123
           + ELL  + +CN+ S+AIQSV N Y+P E+LTDF+KLLDDE  K+    SS   N  ++R
Sbjct: 62  VAELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMR 121

Query: 124 QFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPV 183
           QFREA+W        NVHHAG+PM G++ ED+VMTSTQC LLN+TCPLSGKPVTELA+PV
Sbjct: 122 QFREAVW--------NVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPV 181

Query: 184 RSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRH 243
           RS +C+H+YEK+ I+ Y+ +  + A CPVA C   LQ  KV+ D  L+ EI+E+R +++ 
Sbjct: 182 RSMDCRHVYEKSVILHYIVNNPN-ANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQ 241

Query: 244 SER---IQDFTE 253
           S R   I+DFTE
Sbjct: 242 SNRAEVIEDFTE 244

[Close]

BLAST of MELO3C025617.2 vs. TrEMBL
Match: tr|A0A1S3CLF9|A0A1S3CLF9_CUCME (E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.9e-130
Identity = 248/256 (96.88%), Postives = 248/256 (96.88%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           IIRQFREAIW        NVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA
Sbjct: 121 IIRQFREAIW--------NVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM
Sbjct: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240

Query: 241 SRHSERIQDFTELDAD 257
           SRHSERIQDFTELDAD
Sbjct: 241 SRHSERIQDFTELDAD 248

[Close]

BLAST of MELO3C025617.2 vs. TrEMBL
Match: tr|A0A0A0L3C3|A0A0A0L3C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628940 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.6e-124
Identity = 239/256 (93.36%), Postives = 242/256 (94.53%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MASASDSRSTGVTGRIKSAATIMHS+NQSLLAELRKTLIMMKEIGVDLEKE Q KMVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           EKS+VELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVS +SSSNFANHP
Sbjct: 61  EKSIVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSSNFANHP 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           IIRQFREAIW        NVHHAGQ MAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA
Sbjct: 121 IIRQFREAIW--------NVHHAGQAMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRS ECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM
Sbjct: 181 EPVRSVECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240

Query: 241 SRHSERIQDFTELDAD 257
           SRHS RIQDFTELDAD
Sbjct: 241 SRHSGRIQDFTELDAD 248

[Close]

BLAST of MELO3C025617.2 vs. TrEMBL
Match: tr|A0A2I4H252|A0A2I4H252_9ROSI (E3 SUMO-protein ligase MMS21 OS=Juglans regia OX=51240 GN=LOC109012836 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 8.6e-83
Identity = 164/259 (63.32%), Postives = 202/259 (77.99%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S SR  G TGRIK+AA+ ++S+N SL+ E+RK L MMKEI VDLE++NQ++MVKEL
Sbjct: 1   MASTSASRFDGATGRIKTAASTLYSDNNSLITEIRKALNMMKEIAVDLERDNQSEMVKEL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E ++VELL+AYE+C +FSSAI+SVG+ Y+P  EL+ F+KL ++E+ K+  +SSS   N  
Sbjct: 61  ENTVVELLAAYEDCTHFSSAIKSVGDRYQPAGELSRFKKLFEEEIVKLKASSSSAPQNDR 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           I RQFREAIW        NVHHAG+PM GEEQED+VMTSTQCNLLN+TCPLSGKPVTELA
Sbjct: 121 ITRQFREAIW--------NVHHAGEPMPGEEQEDIVMTSTQCNLLNITCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRS  CKHIYEK A+M Y+ SK  R+QCPVA CPK+LQ +KVV DP L IEIDE+R M
Sbjct: 181 EPVRSVACKHIYEKKAVMLYMRSKNPRSQCPVAGCPKLLQAEKVVCDPLLLIEIDEMRTM 240

Query: 241 SRHSER---IQDFTELDAD 257
           S  + R   I+D TELD +
Sbjct: 241 SNQTARTDMIEDCTELDEE 251

[Close]

BLAST of MELO3C025617.2 vs. TrEMBL
Match: tr|A0A2R6QCI7|A0A2R6QCI7_ACTCH (E3 SUMO-protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc19106 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 157/253 (62.06%), Postives = 195/253 (77.08%), Query Frame = 0


Query: 1   MASAS-DSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKE 60
           MAS S  SR +GV GRI+SAAT + S+NQSL+AE+RK +I MK++ VDLE  NQ++MVKE
Sbjct: 1   MASTSAASRPSGVAGRIQSAATTLFSDNQSLIAEIRKVMITMKDVAVDLEGRNQSQMVKE 60

Query: 61  LEKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANH 120
           LE  +++LL A E+C++FSSAIQSVGN Y+P  ELTDF+KLLDDE+AK   NSSS   NH
Sbjct: 61  LEDGVLQLLVATEDCSHFSSAIQSVGNGYQPATELTDFKKLLDDEIAKSKANSSSVLQNH 120

Query: 121 PIIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTEL 180
            ++RQFREAIW        NVHHAGQPM GEEQED+VMTSTQ NLLN+ CPL+GKP+TEL
Sbjct: 121 LLLRQFREAIW--------NVHHAGQPMPGEEQEDLVMTSTQSNLLNINCPLTGKPITEL 180

Query: 181 AEPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELR- 240
           A PVRS +CKHIYEK AIM Y+  K   +QCP A CPK+L  ++VV DP L +EIDE+R 
Sbjct: 181 ATPVRSVDCKHIYEKDAIMPYIKFKNPHSQCPAAGCPKILVAERVVCDPLLLVEIDEMRC 240

Query: 241 KMSRHSERIQDFT 252
           K S  ++ ++DFT
Sbjct: 241 KQSARTDVVEDFT 245

[Close]

BLAST of MELO3C025617.2 vs. TrEMBL
Match: tr|A0A2C9W690|A0A2C9W690_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G104900 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 4.9e-78
Identity = 152/259 (58.69%), Postives = 200/259 (77.22%), Query Frame = 0


Query: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60
           MAS S SR  G  GRIK+AAT + +E+QSL+AE+RK L MM +I VDLEK+N++  VK+L
Sbjct: 1   MASTSASRHGGAAGRIKNAATTLSAESQSLVAEIRKALHMMMDIAVDLEKDNESAKVKDL 60

Query: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120
           E ++ EL+ AYENC  +++AI+SVGN Y+P  ELTDF+KLL+DE  K+  +SSS   NH 
Sbjct: 61  ENAVAELVEAYENCATYAAAIESVGNIYQPGAELTDFKKLLEDEFEKLKSSSSSASQNHQ 120

Query: 121 IIRQFREAIWPISTLFLQNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELA 180
           +IR+FREA+W        NVHH+GQPM GEEQED++MTSTQ +LLNV CPLSGKPVTELA
Sbjct: 121 LIRKFREAVW--------NVHHSGQPMPGEEQEDIIMTSTQSSLLNVVCPLSGKPVTELA 180

Query: 181 EPVRSAECKHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKM 240
           EPVRS  CKHIYEK AIM Y++S++ + +CP+A CP++LQ +KVV DP L +EI+E+R +
Sbjct: 181 EPVRSVLCKHIYEKKAIMLYISSERGQPKCPIAGCPRILQAEKVVCDPLLVVEIEEMRCI 240

Query: 241 SRHSER---IQDFTELDAD 257
           SR + R   ++DFTELD +
Sbjct: 241 SRQTARANVVEDFTELDEE 251

The following BLAST results are available for this feature:

BLAST of MELO3C025617.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463706.1	2.9e-130	96.88	PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo]	[more]
XP_004146042.1	2.3e-124	93.36	PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis sativus] >KGN55097.1 hypothetic...	[more]
XP_022941288.1	9.6e-110	82.03	E3 SUMO-protein ligase MMS21 [Cucurbita moschata]	[more]
XP_023525588.1	1.3e-109	82.03	E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo]	[more]
XP_022981951.1	6.2e-109	82.28	E3 SUMO-protein ligase MMS21 [Cucurbita maxima]	[more]

BLAST of MELO3C025617.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15150.1	1.8e-70	54.37	RING/U-box superfamily protein	[more]

BLAST of MELO3C025617.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYH7\|NSE2_ARATH	3.3e-69	54.37	E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1	[more]

BLAST of MELO3C025617.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLF9\|A0A1S3CLF9_CUCME	1.9e-130	96.88	E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=4 SV=1	[more]
tr\|A0A0A0L3C3\|A0A0A0L3C3_CUCSA	1.6e-124	93.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628940 PE=4 SV=1	[more]
tr\|A0A2I4H252\|A0A2I4H252_9ROSI	8.6e-83	63.32	E3 SUMO-protein ligase MMS21 OS=Juglans regia OX=51240 GN=LOC109012836 PE=4 SV=1	[more]
tr\|A0A2R6QCI7\|A0A2R6QCI7_ACTCH	2.2e-78	62.06	E3 SUMO-protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_A...	[more]
tr\|A0A2C9W690\|A0A2C9W690_MANES	4.9e-78	58.69	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G104900 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0019789	SUMO transferase activity
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0000724	double-strand break repair via homologous recombination

Vocabulary: **Cellular Component**
Term	Definition
GO:0030915	Smc5-Smc6 complex

Vocabulary: **INTERPRO**
Term	Definition
IPR026846	Nse2(Mms21)
IPR013083	Znf_RING/FYVE/PHD
IPR004181	Znf_MIZ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0016925	protein sumoylation
biological_process	GO:0060250	germ-line stem-cell niche homeostasis
biological_process	GO:0032876	negative regulation of DNA endoreduplication
biological_process	GO:0008284	positive regulation of cell proliferation
biological_process	GO:0080038	positive regulation of cytokinin-activated signaling pathway
biological_process	GO:0045931	positive regulation of mitotic cell cycle
biological_process	GO:0010082	regulation of root meristem growth
cellular_component	GO:0030915	Smc5-Smc6 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0019789	SUMO transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C025617.2.1	MELO3C025617.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 167..239
IPR004181	Zinc finger, MIZ-type	PFAM	PF11789	zf-Nse	coord: 154..215 e-value: 1.2E-13 score: 50.5
IPR004181	Zinc finger, MIZ-type	CDD	cd16651	SPL-RING_NSE2	coord: 168..236 e-value: 5.14557E-24 score: 91.5372
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 163..249 e-value: 8.7E-19 score: 69.5
IPR026846	E3 SUMO-protein ligase Nse2 (Mms21)	PANTHER	PTHR21330	UNCHARACTERIZED	coord: 9..254

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C025617.2	Csa4G628940	Cucumber (Chinese Long) v2	cumedB283
MELO3C025617.2	CSPI04G23150	Wild cucumber (PI 183967)	cpimedB287
MELO3C025617.2	Cucsa.122840	Cucumber (Gy14) v1	cgymedB186
MELO3C025617.2	CmaCh01G012310	Cucurbita maxima (Rimu)	cmamedB509
MELO3C025617.2	CmoCh01G012840	Cucurbita moschata (Rifu)	cmomedB497
MELO3C025617.2	Lsi04G020410	Bottle gourd (USVL1VR-Ls)	lsimedB331
MELO3C025617.2	Cp4.1LG02g01900	Cucurbita pepo (Zucchini)	cpemedB631
MELO3C025617.2	CsGy4G021540	Cucumber (Gy14) v2	cgybmedB252
MELO3C025617.2	Cla023353	Watermelon (97103) v1	medwmB524
MELO3C025617.2	ClCG11G017750	Watermelon (Charleston Gray)	medwcgB450
MELO3C025617.2	Cla97C11G223780	Watermelon (97103) v2	medwmbB460
MELO3C025617.2	Bhi09G002840	Wax gourd	medwgoB609
MELO3C025617.2	Carg14716	Silver-seed gourd	carmedB0326
MELO3C025617.2	CsaV3_4G033370	Cucumber (Chinese Long) v3	cucmedB291

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C025617.2	Cucurbita maxima (Rimu)	cmamedB037
MELO3C025617.2	Cucurbita maxima (Rimu)	cmamedB043
MELO3C025617.2	Cucurbita maxima (Rimu)	cmamedB153
MELO3C025617.2	Cucurbita moschata (Rifu)	cmomedB027
MELO3C025617.2	Cucurbita moschata (Rifu)	cmomedB033
MELO3C025617.2	Cucurbita moschata (Rifu)	cmomedB142
MELO3C025617.2	Cucurbita pepo (Zucchini)	cpemedB770
MELO3C025617.2	Cucurbita pepo (Zucchini)	cpemedB865
MELO3C025617.2	Cucurbita pepo (Zucchini)	cpemedB871
MELO3C025617.2	Watermelon (Charleston Gray)	medwcgB494
MELO3C025617.2	Watermelon (97103) v1	medwmB507
MELO3C025617.2	Silver-seed gourd	carmedB0176
MELO3C025617.2	Silver-seed gourd	carmedB0179