Carg14716 (gene) Silver-seed gourd

NameCarg14716
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 SUMO-protein ligase MMS21
LocationCucurbita_argyrosperma_scaffold_048 : 589988 .. 594411 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGGTTATCTCTTCTTCAAAGGAATGGCGTCCACTTCCAATTCCAATTCAACTGGCGTTTCCGAAAGAATCAAATCCGCTGCCACTATTATGAACTCTGAGAATCAATCTCTCCTTGCCGTAACTTTCTTAATACTATTCTCTTTCTTCTTTGTCTGCTTTCAATTTGTTCTTCTTTTTATTCTACTGTTTGTGCTTTTCCGATCGACAGATTAAATTTTCTAATTTCCATGGAAAATGAAGTTGCCGTTTCTAAATACATCTTGTTTTTAGCTTTAAGATCTCGATTTCCTATATAGAGAGTCAGTTCTAACGCTGTATTTCCTTCACTTTGCTCTGTGAACTGTGTTTTCTTGATTTCTGAAAACTGAAAAACTATTGGAAGATGATCTTGTGTATTCTTTTAATGGAAAATCTCCCCGCCCAACCCGTTTTCTTCAGTTCGTGGTCCGAGAAGACGAGATAAGAATGGTGAATTAAATTTGAGGAGTGATTGAGATTATTAGGTTGAAAAGTATGATTCGATAGGAATTCGATGAATGATGATGGATTATCTGTTTATTTCTTGATTGGATTTTACTGTCTTAATTTCAGGAATTACGGAAGTCGCTGATCATGATGAAGGAAATCGGGGTGGATTTGGAGAGGGACAATCAGTCGAGGATGGTACTATGAACTATTGACCTTAATTTCGAATATTCAGAAATTTTTGTAATTTGTTACTTTGGAAGAGAATGTTGTTAGGATAAGATATTGTTTGTAATAAAATATACTAAGAAGCAAGTACCTAACATGTTCATTGCTCATTGTTGATCATTGTTGCTTGGAACCCTTAACTAATGATTTACTTGGTATTTGAACATTATTTTAGGTCAAGGAGCTTGAAAATTCTGTTGTTGAGCTGTTGGGTACTTATGAAAAATGTAGCAACTTTTCATCTGCAATTCAGTCAGTTGGAAATATATATGAACCACAAGAAGAGGTGCTTGAATGCACTTTCCCCTACACTCTTTTCTTTTTTGGTTAATTTTCATTGTGATGGTTCCTTCCTTCGTACATAATATTCTATGTTGATCATGTAGTTAACTGATTTTGAGAAACTACTTGACAATGAAGTTGCAAAAGTCAGCGAAAATTCGTCTTCAAATTTGCAGAACCATTCAATAATTCGACAGTTTAGAGAAGCTATTTGGGTATGCATCTTCATCTTCTTTAATATGCACTAGGAAATTTTGGAATGCGTTAGTTCACTTCTATGACTTTCTACTAGTCGGGCTTTAGAACTGATTATGCGTGGCAGCAACAAGAAAGTCCTCAAATCAGTGCAAATAATTATACTAATACTGTGAAAATTCCCAACAGATGAGAAGTAAGCAAGAGAAAATTCATAAGTGATTGGAAACCATTTTTTTGTTCTTCCAATTGCATTATTCTTTCCAATGCTTTAACTTATCTCTCGCAATATTCCGGCAGAATGTTCATCACGCAGGACAACCAATGCCTGGTGAGGAGCAGGAGGACGTTGTGATGACCAGTACTCAGTGTAATCTATTGAATGTCACTTGCCCGTTGAGTGGAAAGCCTGTCACTGAATTGGCAGAACCTGTTCGAAGGTATGTTATTTCATGAAGGATAAAGAATTGGAACCATTTCTGTTAGCATTGAAAAAGAAGTCTGCTTTGTTAGGATTATTGGGAGGGAGTCCTACGTTGGCTAATTTAAAGGGAATGATCATGAATTTATAAGTAAAGAATACATTTCCATTGGTACGAGGCCATTTGGGAAAGCCCAAAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAACATCATACCATTGTGGAGAGTCGTTATTCCTAACATGCTTATCTATCCCCTGTGTACTAACAGCATGGATGTTGAAAGGGAATGGCTACATGCTTTATTTTCTCTAGTTTCATTTTTCAAGTGGATGCCTAAAAAATGGAATGAGCTTGGATCTTCTTCTTTTTCAGAGCCGAGTTTCGAAATTGTTTTTTGTTCCTTAAAACAAATAATCATTTTAGGTTGTGGAAAAGATTCACTCACATGGAATGTATAGGCCTTCTTGTTTTTTCTTGATTTTTTTACTTCGAGTTCAACCACACGTTGAAGAGGACGATTCTAATTTTTTATTTTTCGATCGATGATATAATGCTTATGTTTAAGCTAACTTCCATAGCCTGTTGTTATAGATCAGTACGGCCAGGCCATTGTGCATTTAAACACTTCTACTAAGTCCCCTTTTCGTCTCTACTTTCTGCAATTTTCAGTACGGAATGCAAGCACGTCTACGAAAAGGTTGCCATAATGCAGTACCTAAAGTCCAAGAGATCACGAGCTCAATGCCCTGTTGCTGGTATTAGAATCTACTACATTACATGTACTGCATAAAATGTTTTTAGATTGCTAATCTCACTTGACCTCTTTGTCCTTGTAGCCTGTCCTAAGATGTTGCAGCCTGAAAAAGTCATTTCTGATCCATTCTTGCCGATTGAAATTGATGAACTACGCAAAACGTCTAAGCATTCAGTGAGGATACAGGATTTCACAGAGGTTGATGCAGATTAACATCACTGAAGTAACTTCTTTTACATATTTTGTCATTGTCTTAGTAGATTTCTTGGATCAAATGTTCTGCTTGGTAACTTTAGCTCGTTAGGGATGTTCATGGTTATCTATATCTATCAATATGAATTGTCTCTATTTATGTTCGAATGGAGAATTGTGGCTTCATTCTCAAATAGCCATTGCCCTTTAAATTTTATAGAAGGTTCATGAAAGGTCTATCTTTTTGATCGAAGGGGCAAATTCCTGTGACATTTTTTACAATTTAGCCAAATATGTAACAAGGATGGTTTGGTTTTGGGAAGAGAGGTTTACAAAAACAAAATCAAACACAATATGTAACTGAAGAAACTAAAATTCTGCTCCCATTTAACAACTGAACATTTAACCTACATACAACCTCAGTTTAATAGATATCTCTACCTAGAAATCTGATACAATTCAAGACTATGGGGCATTACAAAACTTGTAACAGTATAAGAGAGTGAGCTCGGACTAGAAAGTACAAGGAATTGACATTAAGAAGTGTCAATTTCAAAAGACTCCATCCAAATATGATGAATCCAACCCTCCCAGAAGCTCAAAATGACCTTAAACTAAAATGTTTGGTTGAGCATATCCAGCAGGATTGGAAACTCAAGACATAGCATTAGGAACTCATCCATTCACTCCTTTGATGATGTACCTCATATTCCAATAGTTGATGATCATGAAGAGCAGCAACCAACTTTCTTTACTGCAGAAACATCATCCTTGTTTCCAACGTTTATGGTTTGTCCTTTAGGCAATGTTGTGGCATCCTCCCCAATCTCGAGTGCTTTTCTGCAAACTACACGATAGATTTGGGTTAGCACTTCGGTAAAAGCACTCTCGACATTCAGAGACTCGAGGGCAGATGTCTCCATGAAGAAAGTGTTCTCCTTCTCCGCAAAGGCCGAGGCATCTTCAGTCGAAACAGCACGCAGATGTCGCAAGTCTGCCTTGTTACCAACTAGCATTATCACAATATTGGAATCTGTGTGATCCCTGAGTTCTTTCAACCATCTCTCAACGTTTTCAAATGTCACGTGTCGTGTGACATCATAAACAAGCAATGCACCAACGGCCCCTCGATAGTATGCACTTGTGATTGCACGGTATCTGCCAAAAAGAAGCTTATAAGATACATAATTCACAATAGTTTAAGGGTCTTTTGAGGTGAACATATCATGAAATCTCTATCAGTATTACTCTATCAGGCTTTGCTAGCAATGTCAAATCTACACAAAAGATATTGCATACTACATTTTGGCACAAGCCTGATTCATTACGGTCTTATGGATTCAGTAAGTATATACAAAAATCACATCATGAATAGTTGGGTGCTCTTTTCTTATCAGATCGAGATTATTACTTAAAGAGATAATTCAGACTACTCTAAGAAAATCGATCAAAATTCATTCACAACCCTAAAACTCATATCAAATTCCTTGAGACTGAAGGAATCTAAGAGTTTGATCCCCAGAAACTCCAATTCCATCAGATACATAACGCGATCACCATCTCAACAAGCAAGTAATCTCTTAGAACCAATATCTGAAAGCTTCTTAATTCTCAGACCCCCCAAGAACAGAAGAACACACCCAAAAGCCCTATAAATCCTACGTCCCTGTAATTCCCAACGATTCAGTGAACCATCAAAATCTCAAATTATAATATTAGATCTCAATAAACAGACACGAATAGAATGATAAGGACCCACATTAAGACAATGTCAGAATCCAAAAGAGTCATAGAAGTTAAAGAAGTAGTCGACGAACCTTTCTTGACCGGCGGTGTCCCAAATCTGAGCCTTGAC

mRNA sequence

TTCGGTTATCTCTTCTTCAAAGGAATGGCGTCCACTTCCAATTCCAATTCAACTGGCGTTTCCGAAAGAATCAAATCCGCTGCCACTATTATGAACTCTGAGAATCAATCTCTCCTTGCCGAATTACGGAAGTCGCTGATCATGATGAAGGAAATCGGGGTGGATTTGGAGAGGGACAATCAGTCGAGGATGGTCAAGGAGCTTGAAAATTCTGTTGTTGAGCTGTTGGGTACTTATGAAAAATGTAGCAACTTTTCATCTGCAATTCAGTCAGTTGGAAATATATATGAACCACAAGAAGAGTTAACTGATTTTGAGAAACTACTTGACAATGAAGTTGCAAAAGTCAGCGAAAATTCGTCTTCAAATTTGCAGAACCATTCAATAATTCGACAGTTTAGAGAAGCTATTTGGAATGTTCATCACGCAGGACAACCAATGCCTGGTGAGGAGCAGGAGGACGTTGTGATGACCAGTACTCAGTGTAATCTATTGAATGTCACTTGCCCGTTGAGTGGAAAGCCTGTCACTGAATTGGCAGAACCTGTTCGAAGTACGGAATGCAAGCACGTCTACGAAAAGGTTGCCATAATGCAGTACCTAAAGTCCAAGAGATCACGAGCTCAATGCCCTGTTGCTGCCTGTCCTAAGATGTTGCAGCCTGAAAAAGTCATTTCTGATCCATTCTTGCCGATTGAAATTGATGAACTACGCAAAACGTCTAAGCATTCAGTGAGGATACAGGATTTCACAGAGGTTGATGCAGATTAACATCACTGAAGTAACTTCTTTTACATATTTTGTCATTGTCTTAGTAGATTTCTTGGATCAAATGTTCTGCTTGGTAACTTTAGCTCGTTAGGGATGTTCATGGTTATCTATATCTATCAATATGAATTGTCTCTATTTATGTTCGAATGGAGAATTGTGGCTTCATTCTCAAATAGCCATTGCCCTTTAAATTTTATAGAAGGTTCATGAAAGGTCTATCTTTTTGATCGAAGGGGCAAATTCCTGTGACATTTTTTACAATTTAGCCAAATATGTAACAAGGATGGTTTGGTTTTGGGAAGAGAGGTTTACAAAAACAAAATCAAACACAATATGTAACTGAAGAAACTAAAATTCTGCTCCCATTTAACAACTGAACATTTAACCTACATACAACCTCAGTTTAATAGATATCTCTACCTAGAAATCTGATACAATTCAAGACTATGGGGCATTACAAAACTTGTAACAGTATAAGAGAGTGAGCTCGGACTAGAAAGTACAAGGAATTGACATTAAGAAGTGTCAATTTCAAAAGACTCCATCCAAATATGATGAATCCAACCCTCCCAGAAGCTCAAAATGACCTTAAACTAAAATGTTTGGTTGAGCATATCCAGCAGGATTGGAAACTCAAGACATAGCATTAGGAACTCATCCATTCACTCCTTTGATGATGTACCTCATATTCCAATAGTTGATGATCATGAAGAGCAGCAACCAACTTTCTTTACTGCAGAAACATCATCCTTGTTTCCAACGTTTATGGTTTGTCCTTTAGGCAATGTTGTGGCATCCTCCCCAATCTCGAGTGCTTTTCTGCAAACTACACGATAGATTTGGGTTAGCACTTCGGTAAAAGCACTCTCGACATTCAGAGACTCGAGGGCAGATGTCTCCATGAAGAAAGTGTTCTCCTTCTCCGCAAAGGCCGAGGCATCTTCAGTCGAAACAGCACGCAGATGTCGCAAGTCTGCCTTGTTACCAACTAGCATTATCACAATATTGGAATCTGTGTGATCCCTGAGTTCTTTCAACCATCTCTCAACGTTTTCAAATGTCACGTGTCGTGTGACATCATAAACAAGCAATGCACCAACGGCCCCTCGATAGTATGCACTTGTGATTGCACGGAACCTTTCTTGACCGGCGGTGTCCCAAATCTGAGCCTTGAC

Coding sequence (CDS)

ATGGCGTCCACTTCCAATTCCAATTCAACTGGCGTTTCCGAAAGAATCAAATCCGCTGCCACTATTATGAACTCTGAGAATCAATCTCTCCTTGCCGAATTACGGAAGTCGCTGATCATGATGAAGGAAATCGGGGTGGATTTGGAGAGGGACAATCAGTCGAGGATGGTCAAGGAGCTTGAAAATTCTGTTGTTGAGCTGTTGGGTACTTATGAAAAATGTAGCAACTTTTCATCTGCAATTCAGTCAGTTGGAAATATATATGAACCACAAGAAGAGTTAACTGATTTTGAGAAACTACTTGACAATGAAGTTGCAAAAGTCAGCGAAAATTCGTCTTCAAATTTGCAGAACCATTCAATAATTCGACAGTTTAGAGAAGCTATTTGGAATGTTCATCACGCAGGACAACCAATGCCTGGTGAGGAGCAGGAGGACGTTGTGATGACCAGTACTCAGTGTAATCTATTGAATGTCACTTGCCCGTTGAGTGGAAAGCCTGTCACTGAATTGGCAGAACCTGTTCGAAGTACGGAATGCAAGCACGTCTACGAAAAGGTTGCCATAATGCAGTACCTAAAGTCCAAGAGATCACGAGCTCAATGCCCTGTTGCTGCCTGTCCTAAGATGTTGCAGCCTGAAAAAGTCATTTCTGATCCATTCTTGCCGATTGAAATTGATGAACTACGCAAAACGTCTAAGCATTCAGTGAGGATACAGGATTTCACAGAGGTTGATGCAGATTAA

Protein sequence

MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKELENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHSIIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQDFTEVDAD
BLAST of Carg14716 vs. NCBI nr
Match: XP_023525588.1 (E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 5.6e-131
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240
           KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTEVDAD
Sbjct: 241 DFTEVDAD 248

BLAST of Carg14716 vs. NCBI nr
Match: XP_022941288.1 (E3 SUMO-protein ligase MMS21 [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 6.2e-130
Identity = 246/248 (99.19%), Postives = 248/248 (100.00%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGV+LERDNQSRMVKEL
Sbjct: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVELERDNQSRMVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLD+EVAKVSENSSSNLQNHS
Sbjct: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC
Sbjct: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240
           KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ
Sbjct: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTEVDAD
Sbjct: 241 DFTEVDAD 248

BLAST of Carg14716 vs. NCBI nr
Match: XP_022981951.1 (E3 SUMO-protein ligase MMS21 [Cucurbita maxima])

HSP 1 Score: 469.2 bits (1206), Expect = 8.9e-129
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0

Query: 1   MAST--SNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVK 60
           MAST  SNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVK
Sbjct: 1   MASTSNSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVK 60

Query: 61  ELENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQN 120
           ELENSVVELL TYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQN
Sbjct: 61  ELENSVVELLSTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQN 120

Query: 121 HSIIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRST 180
           HSIIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRST
Sbjct: 121 HSIIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRST 180

Query: 181 ECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR 240
           ECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR
Sbjct: 181 ECKHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR 240

Query: 241 IQDFTEVDAD 249
           IQDFTEVDAD
Sbjct: 241 IQDFTEVDAD 250

BLAST of Carg14716 vs. NCBI nr
Match: XP_022139610.1 (E3 SUMO-protein ligase MMS21 isoform X1 [Momordica charantia])

HSP 1 Score: 420.2 bits (1079), Expect = 4.8e-114
Identity = 215/248 (86.69%), Postives = 234/248 (94.35%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MASTS++ S+ VS RIKSAAT+M+SENQSLLAE+RK LIMMKEIG+DLERDNQS MVK+L
Sbjct: 1   MASTSDTRSSAVSGRIKSAATMMHSENQSLLAEIRKLLIMMKEIGMDLERDNQSTMVKKL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           EN+VVELL TYE C NFSSAIQSVGNIYEP+EELTDFEKLLD+EVAKVSENSSSNLQNHS
Sbjct: 61  ENAVVELLSTYENCDNFSSAIQSVGNIYEPREELTDFEKLLDDEVAKVSENSSSNLQNHS 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           IIR+FREAIWNVHHAGQPMPGEEQED+VMTSTQCNLLNVTCPLSGKPVTELA+PVRS EC
Sbjct: 121 IIRKFREAIWNVHHAGQPMPGEEQEDIVMTSTQCNLLNVTCPLSGKPVTELAQPVRSMEC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240
           KHVYEK A+MQYL+SK SRAQCPVAACPKMLQPEKV  DPFL IEIDELRKTS+HSVRIQ
Sbjct: 181 KHVYEKEAVMQYLRSKNSRAQCPVAACPKMLQPEKVTPDPFLLIEIDELRKTSRHSVRIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DA+
Sbjct: 241 DFTELDAE 248

BLAST of Carg14716 vs. NCBI nr
Match: XP_008463706.1 (PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 6.4e-111
Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLE++NQ++MVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVS NSSSN  NH 
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           IIRQFREAIWNVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240
           KH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DAD
Sbjct: 241 DFTELDAD 248

BLAST of Carg14716 vs. TAIR10
Match: AT3G15150.1 (RING/U-box superfamily protein)

HSP 1 Score: 264.6 bits (675), Expect = 6.1e-71
Identity = 141/248 (56.85%), Postives = 184/248 (74.19%), Query Frame = 0

Query: 5   SNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKELENSV 64
           S S+S GV+ RI++A+ ++ S+N S LA++RK++ MMK I V LE++NQ+  VK+LENSV
Sbjct: 3   SASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSV 62

Query: 65  VELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHSIIRQ 124
            ELL  +  C++ S+AIQSV N Y+P E+LTDF+KLLD+E  K+    SS  QN  ++RQ
Sbjct: 63  AELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMRQ 122

Query: 125 FREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTECKHVY 184
           FREA+WNVHHAG+PMPG++ ED+VMTSTQC LLN+TCPLSGKPVTELA+PVRS +C+HVY
Sbjct: 123 FREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHVY 182

Query: 185 EKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR---IQD 244
           EK  I+ Y+ +    A CPVA C   LQ  KVI D  L  EI+E+R  +K S R   I+D
Sbjct: 183 EKSVILHYIVN-NPNANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIED 242

Query: 245 FTE-VDAD 249
           FTE VD D
Sbjct: 243 FTEDVDED 249

BLAST of Carg14716 vs. Swiss-Prot
Match: sp|Q8GYH7|NSE2_ARATH (E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-69
Identity = 141/248 (56.85%), Postives = 184/248 (74.19%), Query Frame = 0

Query: 5   SNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKELENSV 64
           S S+S GV+ RI++A+ ++ S+N S LA++RK++ MMK I V LE++NQ+  VK+LENSV
Sbjct: 3   SASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSV 62

Query: 65  VELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHSIIRQ 124
            ELL  +  C++ S+AIQSV N Y+P E+LTDF+KLLD+E  K+    SS  QN  ++RQ
Sbjct: 63  AELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMRQ 122

Query: 125 FREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTECKHVY 184
           FREA+WNVHHAG+PMPG++ ED+VMTSTQC LLN+TCPLSGKPVTELA+PVRS +C+HVY
Sbjct: 123 FREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHVY 182

Query: 185 EKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR---IQD 244
           EK  I+ Y+ +    A CPVA C   LQ  KVI D  L  EI+E+R  +K S R   I+D
Sbjct: 183 EKSVILHYIVN-NPNANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIED 242

Query: 245 FTE-VDAD 249
           FTE VD D
Sbjct: 243 FTEDVDED 249

BLAST of Carg14716 vs. TrEMBL
Match: tr|A0A1S3CLF9|A0A1S3CLF9_CUCME (E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 4.3e-111
Identity = 210/248 (84.68%), Postives = 228/248 (91.94%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MAS S+S STGV+ RIKSAATIM+SENQSLLAELRK+LIMMKEIGVDLE++NQ++MVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSENQSLLAELRKTLIMMKEIGVDLEKENQNKMVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVS NSSSN  NH 
Sbjct: 61  EKSMVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSVNSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           IIRQFREAIWNVHHAGQPM GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQPMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSAEC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240
           KH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSERIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DAD
Sbjct: 241 DFTELDAD 248

BLAST of Carg14716 vs. TrEMBL
Match: tr|A0A0A0L3C3|A0A0A0L3C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628940 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 4.0e-109
Identity = 207/248 (83.47%), Postives = 226/248 (91.13%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MAS S+S STGV+ RIKSAATIM+S+NQSLLAELRK+LIMMKEIGVDLE++ Q +MVKEL
Sbjct: 1   MASASDSRSTGVTGRIKSAATIMHSDNQSLLAELRKTLIMMKEIGVDLEKEKQYKMVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           E S+VELL  YE C+NFSSAIQSVGN YEP+EELTDFEKLLD+EVAKVSE+SSSN  NH 
Sbjct: 61  EKSIVELLSAYENCNNFSSAIQSVGNTYEPKEELTDFEKLLDDEVAKVSESSSSNFANHP 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           IIRQFREAIWNVHHAGQ M GEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRS EC
Sbjct: 121 IIRQFREAIWNVHHAGQAMAGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSVEC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVRIQ 240
           KH+YEK AIMQYL SK+SRAQCPVAACPKMLQP+KV+ DPFL IEIDELRK S+HS RIQ
Sbjct: 181 KHIYEKAAIMQYLNSKKSRAQCPVAACPKMLQPDKVVLDPFLEIEIDELRKMSRHSGRIQ 240

Query: 241 DFTEVDAD 249
           DFTE+DAD
Sbjct: 241 DFTELDAD 248

BLAST of Carg14716 vs. TrEMBL
Match: tr|A0A2I4H252|A0A2I4H252_9ROSI (E3 SUMO-protein ligase MMS21 OS=Juglans regia OX=51240 GN=LOC109012836 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 2.6e-84
Identity = 165/251 (65.74%), Postives = 200/251 (79.68%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MASTS S   G + RIK+AA+ + S+N SL+ E+RK+L MMKEI VDLERDNQS MVKEL
Sbjct: 1   MASTSASRFDGATGRIKTAASTLYSDNNSLITEIRKALNMMKEIAVDLERDNQSEMVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           EN+VVELL  YE C++FSSAI+SVG+ Y+P  EL+ F+KL + E+ K+  +SSS  QN  
Sbjct: 61  ENTVVELLAAYEDCTHFSSAIKSVGDRYQPAGELSRFKKLFEEEIVKLKASSSSAPQNDR 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           I RQFREAIWNVHHAG+PMPGEEQED+VMTSTQCNLLN+TCPLSGKPVTELAEPVRS  C
Sbjct: 121 ITRQFREAIWNVHHAGEPMPGEEQEDIVMTSTQCNLLNITCPLSGKPVTELAEPVRSVAC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR-- 240
           KH+YEK A+M Y++SK  R+QCPVA CPK+LQ EKV+ DP L IEIDE+R  S  + R  
Sbjct: 181 KHIYEKKAVMLYMRSKNPRSQCPVAGCPKLLQAEKVVCDPLLLIEIDEMRTMSNQTARTD 240

Query: 241 -IQDFTEVDAD 249
            I+D TE+D +
Sbjct: 241 MIEDCTELDEE 251

BLAST of Carg14716 vs. TrEMBL
Match: tr|A0A2C9W690|A0A2C9W690_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G104900 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.0e-80
Identity = 152/251 (60.56%), Postives = 203/251 (80.88%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MASTS S   G + RIK+AAT +++E+QSL+AE+RK+L MM +I VDLE+DN+S  VK+L
Sbjct: 1   MASTSASRHGGAAGRIKNAATTLSAESQSLVAEIRKALHMMMDIAVDLEKDNESAKVKDL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           EN+V EL+  YE C+ +++AI+SVGNIY+P  ELTDF+KLL++E  K+  +SSS  QNH 
Sbjct: 61  ENAVAELVEAYENCATYAAAIESVGNIYQPGAELTDFKKLLEDEFEKLKSSSSSASQNHQ 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           +IR+FREA+WNVHH+GQPMPGEEQED++MTSTQ +LLNV CPLSGKPVTELAEPVRS  C
Sbjct: 121 LIRKFREAVWNVHHSGQPMPGEEQEDIIMTSTQSSLLNVVCPLSGKPVTELAEPVRSVLC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR-- 240
           KH+YEK AIM Y+ S+R + +CP+A CP++LQ EKV+ DP L +EI+E+R  S+ + R  
Sbjct: 181 KHIYEKKAIMLYISSERGQPKCPIAGCPRILQAEKVVCDPLLVVEIEEMRCISRQTARAN 240

Query: 241 -IQDFTEVDAD 249
            ++DFTE+D +
Sbjct: 241 VVEDFTELDEE 251

BLAST of Carg14716 vs. TrEMBL
Match: tr|M5WIK7|M5WIK7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa010465mg PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 6.6e-80
Identity = 155/251 (61.75%), Postives = 198/251 (78.88%), Query Frame = 0

Query: 1   MASTSNSNSTGVSERIKSAATIMNSENQSLLAELRKSLIMMKEIGVDLERDNQSRMVKEL 60
           MASTS S + G + RI++A   +  +NQSL++++R+++  MKEI VDLERDNQ   VKEL
Sbjct: 1   MASTSASRTHGATGRIRTATATLYEDNQSLISDIRRAVGAMKEIAVDLERDNQFERVKEL 60

Query: 61  ENSVVELLGTYEKCSNFSSAIQSVGNIYEPQEELTDFEKLLDNEVAKVSENSSSNLQNHS 120
           EN+V+ELLGT+E CS+FSS IQSVG  Y+P  ELTDF++L  NEVA +  NS S+ QNH 
Sbjct: 61  ENAVIELLGTHEDCSHFSSTIQSVGEKYQPGPELTDFDQLFKNEVAMLKANSFSDPQNHP 120

Query: 121 IIRQFREAIWNVHHAGQPMPGEEQEDVVMTSTQCNLLNVTCPLSGKPVTELAEPVRSTEC 180
           ++RQFREA+WNVHH+G+PMPGEEQED+VMTS QCN+LNVTCPLSGKP+TEL  PVRS  C
Sbjct: 121 LMRQFREAVWNVHHSGEPMPGEEQEDIVMTSNQCNILNVTCPLSGKPITELQHPVRSVVC 180

Query: 181 KHVYEKVAIMQYLKSKRSRAQCPVAACPKMLQPEKVISDPFLPIEIDELRKTSKHSVR-- 240
           KHVY+K +IM YL+SK +R  CPVAACPK+LQ +KV+ DP L +EIDELR   + +V   
Sbjct: 181 KHVYDKGSIMHYLRSKNTR--CPVAACPKLLQADKVVCDPLLLVEIDELRAMKEQTVMTD 240

Query: 241 -IQDFTEVDAD 249
            I+DFTE+D +
Sbjct: 241 VIEDFTELDEE 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023525588.15.6e-131100.00E3 SUMO-protein ligase MMS21 [Cucurbita pepo subsp. pepo][more]
XP_022941288.16.2e-13099.19E3 SUMO-protein ligase MMS21 [Cucurbita moschata][more]
XP_022981951.18.9e-12998.80E3 SUMO-protein ligase MMS21 [Cucurbita maxima][more]
XP_022139610.14.8e-11486.69E3 SUMO-protein ligase MMS21 isoform X1 [Momordica charantia][more]
XP_008463706.16.4e-11184.68PREDICTED: E3 SUMO-protein ligase MMS21 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G15150.16.1e-7156.85RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q8GYH7|NSE2_ARATH1.1e-6956.85E3 SUMO-protein ligase MMS21 OS=Arabidopsis thaliana OX=3702 GN=MMS21 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3CLF9|A0A1S3CLF9_CUCME4.3e-11184.68E3 SUMO-protein ligase MMS21 OS=Cucumis melo OX=3656 GN=LOC103501788 PE=4 SV=1[more]
tr|A0A0A0L3C3|A0A0A0L3C3_CUCSA4.0e-10983.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628940 PE=4 SV=1[more]
tr|A0A2I4H252|A0A2I4H252_9ROSI2.6e-8465.74E3 SUMO-protein ligase MMS21 OS=Juglans regia OX=51240 GN=LOC109012836 PE=4 SV=1[more]
tr|A0A2C9W690|A0A2C9W690_MANES1.0e-8060.56Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G104900 PE=4 SV=... [more]
tr|M5WIK7|M5WIK7_PRUPE6.6e-8061.75Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa010465mg PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0019789SUMO transferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0000724double-strand break repair via homologous recombination
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
Vocabulary: INTERPRO
TermDefinition
IPR026846Nse2(Mms21)
IPR013083Znf_RING/FYVE/PHD
IPR004181Znf_MIZ
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
cellular_component GO:0030915 Smc5-Smc6 complex
molecular_function GO:0019789 SUMO transferase activity
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14716-RACarg14716-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004181Zinc finger, MIZ-typePFAMPF11789zf-Nsecoord: 146..207
e-value: 2.1E-14
score: 53.0
IPR004181Zinc finger, MIZ-typeCDDcd16651SPL-RING_NSE2coord: 160..228
e-value: 3.5205E-22
score: 86.1444
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 155..239
e-value: 1.4E-17
score: 65.7
IPR026846E3 SUMO-protein ligase Nse2 (Mms21)PANTHERPTHR21330UNCHARACTERIZEDcoord: 6..246
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 159..231