MELO3C025603.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C025603.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPRA1 family protein
Locationchr07 : 5184041 .. 5186729 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGCTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCATCTCGACAACAAAACAAACACAACAATCTCAAATCAACAATCTTCAATCACAAGGCAATTACATTCAGCCTTTTTATATAACCCTTTTGTCTCTTTTGATTCTGAATTCGTTTTTGTTGTGTTGTGTTGTTGCGATTAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCCGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCATCGTCATTCCTCTGCCGCTCCCCCCACCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCGTTTTTACTCTAAACCCATTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACTCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCTTCTCTTTCTCTTGTTAATTGTGTCTATTGATGGGCTGTTCGCTGCGGATTCTGGCTTGACGTTGAAGTTGTTGTATTTCCTGGAGGTTGTGAATTGGGTTCTGTTTGGTTTTACTTGATGTGGATGGGAAGAGTACGAGTACATCCATTTGTTTAGCGTTTTGATTAAGTTATGAGGATGGGTTTAGTGATTTGGTTTGATTTTTGAAGCTTGTGGGGCTTAAAACTTTTGGAGCCTAATCGATTGCTGATCCCAATGTGAAACATGTAGAAAGAATCGCTTGCATTCCTTTTGTGGATTTAAATGGTTTGACTGAACAGGGAACCACTGTTATTGTTGTTGGCGATTAAACTAGAATACTACTCTATTTATATATTCGTGTTCCTTTATCTGGGATGAATGAGCGTTTGCATGGAAATAAAAGATGTTGACTAGAGATTTGTGACCTTTATTTTACCAATTTCTTAACTTTGAACTCTCGTGTGGATGATTGCAGGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCTGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGGTATGTTACTGACGTTTTAAAACCGTGTTTATTTACACACCTGAGAGGTTCCTCCCAATTGTTTCCTTTAAGCATGTATTAATTAATTGGTATTCTGTTTCATTGTGGCATTTTCACATAGAGAACTTCGGTTGAAAAATGATATCGGTATAGATACAGATCACTATAGCATAGATCATCAGTGTAGATGTAGATGTAGAGTTTAGGTCTCAAATTGAAAGCATACCAACACATTCGATTTTTCTTTCTTTCTTTTTTTACTAGCTTTTTTTATGCGGTCAGTGAGATATACACTGTAGTTCCTGCTTGTTGAATGGTTATTGTTTTGCATGTTCCATTTGGTTACAGATTTCAAGCCTTAAGGCTATTGTTTTCTCAATTTGAGATGACTTTGGATTGATAACTTTTGCGTAGTTGTCCTTAGTTCTTGTAATGGAGCCAAGCTACCAAGTGTGTAGCAAAGCCTAATTCCTGCCTGTTTGATGCTGGAAAAGTTTTACTTGGTACTACAAATGCCTTTTGGAATCGTTGGAATTTTTCAAAACCCTTCTTTTTGAGACAACTCTTTGGGATTATTGGACTTTAAAATTCGGATCCTGTTGTATGCATTTATTCGTTGTTTTCATGTAAATTACCATCCGTGAGTTCTGTTTGGACTGCTGTTGTTATTTAATTACATAGCATCTTAAATACATAACAAGTATAATGTTTTGCAGCGACTGCTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTGACTTCAGAATTCTAGGCCATGTTATAGAGTTCATTATCATTAGTTGTTCTTATCACCTTTGAAATCTTGGCAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCATCTACCATAAGTCGAAAATAAACTGTTACAGGCAATGGTATTCGTCCTCCTATACATAAGTTATGTTCAAGCAAGCCTAATGCAAGGTACCAACATCTGATTCAAAGACGAAAAGTTCTGGTAATGCTGATCGCAGACTTGAAAGCATGACTTATGTACCTCAGCAGTCACCGTGCCCTTGCTTGAAAATTCATATTATGGTGTGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTTTGTTAGAGGCTAGAAACAAGTAGCAAGTCAAGCTCAAATCTCGTTTAGTACTTTGTTCATTAGTTAATGAAATTAAGTATGGTTATTTTGTACTACTACACGATACTTAGTTCCAGCTTATGATTTGTACCACAAATTTAGCATCTTGTGCTTTACATTTTCTATTAACGAGAGTTTATCAGATTTCAGATGAAGTACAG

mRNA sequence

ACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGCTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCATCTCGACAACAAAACAAACACAACAATCTCAAATCAACAATCTTCAATCACAAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCCGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCATCGTCATTCCTCTGCCGCTCCCCCCACCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCGTTTTTACTCTAAACCCATTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACTCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCTGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGCGACTGCTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCATCTACCATAAGTCGAAAATAAACTGTTACAGGCAATGGTATTCGTCCTCCTATACATAAGTTATGTTCAAGCAAGCCTAATGCAAGGTACCAACATCTGATTCAAAGACGAAAAGTTCTGGTAATGCTGATCGCAGACTTGAAAGCATGACTTATGTACCTCAGCAGTCACCGTGCCCTTGCTTGAAAATTCATATTATGGTGTGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTTTGTTAGAGGCTAGAAACAAGTAGCAAGTCAAGCTCAAATCTCGTTTAGTACTTTGTTCATTAGTTAATGAAATTAAGTATGGTTATTTTGTACTACTACACGATACTTAGTTCCAGCTTATGATTTGTACCACAAATTTAGCATCTTGTGCTTTACATTTTCTATTAACGAGAGTTTATCAGATTTCAGATGAAGTACAG

Coding sequence (CDS)

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCCGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCATCGTCATTCCTCTGCCGCTCCCCCCACCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCGTTTTTACTCTAAACCCATTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACTCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCTGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGCGACTGCTATCATCCTTTTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCATCTACCATAAGTCGAAAATAA

Protein sequence

MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK
Homology
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BLAST of MELO3C025603.2 vs. NCBI nr
Match: XP_008463685.1 (PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 family protein H [Cucumis melo])

HSP 1 Score: 468.0 bits (1203), Expect = 1.9e-128
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

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BLAST of MELO3C025603.2 vs. NCBI nr
Match: XP_004146052.1 (PREDICTED: PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PREDICTED: PRA1 family protein H [Cucumis sativus] >KGN55111.1 hypothetical protein Csa_4G630550 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 1.5e-125
Identity = 228/235 (97.02%), Postives = 232/235 (98.72%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

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BLAST of MELO3C025603.2 vs. NCBI nr
Match: XP_022935725.1 (PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935727.1 PRA1 family protein H-like [Cucurbita moschata] >XP_022935728.1 PRA1 family protein H-like [Cucurbita moschata])

HSP 1 Score: 429.9 bits (1104), Expect = 5.7e-117
Identity = 216/238 (90.76%), Postives = 225/238 (94.54%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   A  PTRPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLSVFTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           +WQCLVRIAQC T IILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+PPS+I+RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]
BLAST of MELO3C025603.2 vs. NCBI nr
Match: XP_022976569.1 (PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976572.1 PRA1 family protein H-like [Cucurbita maxima] >XP_022976573.1 PRA1 family protein H-like [Cucurbita maxima])

HSP 1 Score: 418.3 bits (1074), Expect = 1.7e-113
Identity = 212/238 (89.08%), Postives = 220/238 (92.44%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAA---PPTRPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA          PTA APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAXXXXXXXPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLSVFTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           +WQCLVRIAQC T IILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+PPS+I+RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]
BLAST of MELO3C025603.2 vs. NCBI nr
Match: XP_023535020.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535023.1 PRA1 family protein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 1.7e-113
Identity = 212/238 (89.08%), Postives = 220/238 (92.44%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAA---PPTRPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSA          PTA APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAXXXXXXXPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLSVFTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           +WQCLVRIAQC T IILLFSNFQMAIFCAL +GYTGMILHAAFRKLT T+PPS+I+RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALAVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]
BLAST of MELO3C025603.2 vs. TAIR10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H)

HSP 1 Score: 242.7 bits (618), Expect = 2.3e-64
Identity = 127/238 (53.36%), Postives = 159/238 (66.81%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQR--------TSDLHRHSSAAPPTRPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD R                           
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  AAAPLATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSS 120
                         SR+ T+ S+ T+NPFSKLSA DFSG T  WT+GF+G  +SYSFPSS
Sbjct: 61  XXXXXXXXXXXXXXSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPS 231
           D++P + +  + I QCATA++L F N QMA+F AL I Y+ MILHA FRKLTP+K P+
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPT 238

[Close]
BLAST of MELO3C025603.2 vs. Swiss-Prot
Match: sp|Q8LFP1|PRA1H_ARATH (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-63
Identity = 127/238 (53.36%), Postives = 159/238 (66.81%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQR--------TSDLHRHSSAAPPTRPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD R                           
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  AAAPLATGFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSS 120
                         SR+ T+ S+ T+NPFSKLSA DFSG T  WT+GF+G  +SYSFPSS
Sbjct: 61  XXXXXXXXXXXXXXSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPS 231
           D++P + +  + I QCATA++L F N QMA+F AL I Y+ MILHA FRKLTP+K P+
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPT 238

[Close]
BLAST of MELO3C025603.2 vs. TrEMBL
Match: tr|A0A1S3CLE4|A0A1S3CLE4_CUCME (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 1.2e-128
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

[Close]
BLAST of MELO3C025603.2 vs. TrEMBL
Match: tr|A0A0A0L4P4|A0A0A0L4P4_CUCSA (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 9.9e-126
Identity = 228/235 (97.02%), Postives = 232/235 (98.72%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

[Close]
BLAST of MELO3C025603.2 vs. TrEMBL
Match: tr|E0CSG8|E0CSG8_VITVI (PRA1 family protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g02300 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.1e-81
Identity = 151/230 (65.65%), Postives = 190/230 (82.61%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           M+FSSNPLSLSVPDAAF++WLRD+GYLE++D+RTSDLHR SS    +  + TA+ P  + 
Sbjct: 1   MAFSSNPLSLSVPDAAFETWLRDTGYLEVVDRRTSDLHRLSSGGDSS--STTASIPSNSF 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FF+S+ S + TLLS+FTLNPFSKL++ DFSGPTPSWT  FVGF +SY+FPSS +QARLRV
Sbjct: 61  FFVSILSHLGTLLSLFTLNPFSKLTSDDFSGPTPSWTLAFVGFCDSYTFPSSSSQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HEN KRYARNYA+LF++ F CTLYQMP+AL+GLIS LALWD+++FC D+W +D+YPV+ Q
Sbjct: 121 HENVKRYARNYATLFIICFACTLYQMPIALVGLISSLALWDLLRFCSDKWRVDRYPVVRQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPS 231
            L+   QCATA++L  SN Q A+FCALG+ Y  MILHA+FRKLTP K P+
Sbjct: 181 ALIHTVQCATAVVLFCSNVQFALFCALGVSYAVMILHASFRKLTPAKQPT 228

[Close]
BLAST of MELO3C025603.2 vs. TrEMBL
Match: tr|A0A2I4H3Z1|A0A2I4H3Z1_9ROSI (PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.9e-81
Identity = 157/229 (68.56%), Postives = 180/229 (78.60%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           M+FSSNPLSLSVP+ AF+SWLRDSGYLEILD RTS +       P T   P+      + 
Sbjct: 1   MAFSSNPLSLSVPEPAFESWLRDSGYLEILDHRTSSI-------PNTYSDPSTTTLTNST 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
               L S + TLLS+FT NPFSKL+  DFSG TPSW+ GFVGF +SYSFPSSPAQARLRV
Sbjct: 61  ITSGLISLLLTLLSLFTFNPFSKLTTEDFSGQTPSWSYGFVGFCDSYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HEN KRYARNYA+LF+LFF CTLYQMPLAL+GL+SCLALWD+ KFC +RWGLD +PV+ Q
Sbjct: 121 HENVKRYARNYATLFILFFACTLYQMPLALIGLLSCLALWDVFKFCSNRWGLDHHPVIQQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPP 230
           CLVRIAQC  A+I++ SN QMA+FCALG  YTGMILHAAFRKLT  K P
Sbjct: 181 CLVRIAQCVAAVIVICSNVQMALFCALGFSYTGMILHAAFRKLTSAKQP 222

[Close]
BLAST of MELO3C025603.2 vs. TrEMBL
Match: tr|A0A2I4H3X3|A0A2I4H3X3_9ROSI (PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.9e-81
Identity = 157/229 (68.56%), Postives = 180/229 (78.60%), Query Frame = 0 

Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           M+FSSNPLSLSVP+ AF+SWLRDSGYLEILD RTS +       P T   P+      + 
Sbjct: 1   MAFSSNPLSLSVPEPAFESWLRDSGYLEILDHRTSSI-------PNTYSDPSTTTLTNST 60

Query: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
               L S + TLLS+FT NPFSKL+  DFSG TPSW+ GFVGF +SYSFPSSPAQARLRV
Sbjct: 61  ITSGLISLLLTLLSLFTFNPFSKLTTEDFSGQTPSWSYGFVGFCDSYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HEN KRYARNYA+LF+LFF CTLYQMPLAL+GL+SCLALWD+ KFC +RWGLD +PV+ Q
Sbjct: 121 HENVKRYARNYATLFILFFACTLYQMPLALIGLLSCLALWDVFKFCSNRWGLDHHPVIQQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPP 230
           CLVRIAQC  A+I++ SN QMA+FCALG  YTGMILHAAFRKLT  K P
Sbjct: 181 CLVRIAQCVAAVIVICSNVQMALFCALGFSYTGMILHAAFRKLTSAKQP 222

The following BLAST results are available for this feature:
BLAST of MELO3C025603.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463685.11.9e-128100.00PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 ... [more]
XP_004146052.11.5e-12597.02PREDICTED: PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PREDICTED: PR... [more]
XP_022935725.15.7e-11790.76PRA1 family protein H-like [Cucurbita moschata] >XP_022935726.1 PRA1 family prot... [more]
XP_022976569.11.7e-11389.08PRA1 family protein H-like [Cucurbita maxima] >XP_022976570.1 PRA1 family protei... [more]
XP_023535020.11.7e-11389.08PRA1 family protein H-like [Cucurbita pepo subsp. pepo] >XP_023535022.1 PRA1 fam... [more]
BLAST of MELO3C025603.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27540.12.3e-6453.36prenylated RAB acceptor 1.H[more]
BLAST of MELO3C025603.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LFP1|PRA1H_ARATH4.2e-6353.36PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1[more]
BLAST of MELO3C025603.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CLE4|A0A1S3CLE4_CUCME1.2e-128100.00PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1[more]
tr|A0A0A0L4P4|A0A0A0L4P4_CUCSA9.9e-12697.02PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1[more]
tr|E0CSG8|E0CSG8_VITVI1.1e-8165.65PRA1 family protein OS=Vitis vinifera OX=29760 GN=VIT_19s0014g02300 PE=3 SV=1[more]
tr|A0A2I4H3Z1|A0A2I4H3Z1_9ROSI1.9e-8168.56PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1[more]
tr|A0A2I4H3X3|A0A2I4H3X3_9ROSI1.9e-8168.56PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
biological_process GO:0006914 autophagy
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025603.2.1MELO3C025603.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 103..222
e-value: 6.1E-15
score: 55.0
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 2..227
NoneNo IPR availablePANTHERPTHR19317:SF1PRA1 FAMILY PROTEIN 2coord: 2..227

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C025603.2Csa4G630550Cucumber (Chinese Long) v2cumedB283
MELO3C025603.2CSPI04G23300Wild cucumber (PI 183967)cpimedB287
MELO3C025603.2Cucsa.122990Cucumber (Gy14) v1cgymedB186
MELO3C025603.2CmaCh09G008500Cucurbita maxima (Rimu)cmamedB037
MELO3C025603.2CmaCh01G012170Cucurbita maxima (Rimu)cmamedB509
MELO3C025603.2CmoCh01G012720Cucurbita moschata (Rifu)cmomedB497
MELO3C025603.2CmoCh09G008430Cucurbita moschata (Rifu)cmomedB027
MELO3C025603.2Lsi04G020540Bottle gourd (USVL1VR-Ls)lsimedB331
MELO3C025603.2Cp4.1LG06g06770Cucurbita pepo (Zucchini)cpemedB865
MELO3C025603.2Cp4.1LG02g01780Cucurbita pepo (Zucchini)cpemedB631
MELO3C025603.2CsGy4G021670Cucumber (Gy14) v2cgybmedB252
MELO3C025603.2Cla023367Watermelon (97103) v1medwmB524
MELO3C025603.2ClCG11G017890Watermelon (Charleston Gray)medwcgB450
MELO3C025603.2Cla97C11G223910Watermelon (97103) v2medwmbB460
MELO3C025603.2Bhi09G002823Wax gourdmedwgoB609
MELO3C025603.2Carg14705Silver-seed gourdcarmedB0326
MELO3C025603.2Carg17085Silver-seed gourdcarmedB0176
MELO3C025603.2CsaV3_4G033520Cucumber (Chinese Long) v3cucmedB291
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C025603.2Cucurbita maxima (Rimu)cmamedB153
MELO3C025603.2Cucurbita moschata (Rifu)cmomedB142
MELO3C025603.2Cucurbita pepo (Zucchini)cpemedB770
MELO3C025603.2Watermelon (Charleston Gray)medwcgB494
MELO3C025603.2Watermelon (97103) v1medwmB507