Carg14705 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14705
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	PRA1 family protein
Location	Cucurbita_argyrosperma_scaffold_048 : 537699 .. 540187 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATCCCTTGATTTTGTTGCTTCGATTACGAATGAGTTTCTCACCCAATCCACTTTCCCTCAGCGTTCCTGACGGTGCTTTCGATTCATGGCTCCGCGATTCCGGCTACCTTGAAATTATCGATCAGCGCACCTCTGACGTCCACCGTCATTCCTCCGCCGCTGCTGCCCCCATCACATCTACCTCCGCCCCCACCACCCCTTTAGCTACTGGTTTCTTCATCTCCCTTTTCTCTCGAATCGTGACCTTTCTCTCCATTTTCACCCTTAACCCCTTTGCCAAGCTCTCTGCTGCGGATTTTTCTGGGCCAACCCCCTCCTGGACTTCTGGGTTTATTGGGTCTTTTGAGTCGTATTCGTTTCCTTCTTCGCCGGCACAAGCTCGTCTAAGAGCCCATGAGAATGCTAAACGCTATGCTCGCAATTACGCGTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCTTCTCTCTCTCTCTCTCGTTATTGCTTGGGTGTACATTATGTTCTTGAAGTTGTTTATTTCATGGGGGTTGCGTATTGAGTTCTGTTTGGTTTTTCATGAAGAGGAGAACAGTGGAAGCTGTGAACTAAATGGTTGGATTAGATGAAACTATCAGGCACTTGCAGTTTCTTCTTATGTTTTCCTTTTGTGGATTCAAGTGGTTTGACTGAACAGAGATAGCCACTGTTGCTTTTGTTGGTCATTAAACTCGAACACTATCACTTGGTCATGTTTTTCTTATGTTTAAATTTTGTTGTGGATGATTTCAGGTACCAGATGCCTGTTGCCCTTCTTGGGTTGATATCATGTATGGCACTTTGGGACGTTGTTAAGTTTGGTTGCAACAGGTGGGGATTAGACAAGTATCCAGTTGTTTGGCAGTGTTTGGTTCGCGTTGCTCAGTGTGGTGAGTTTTAACGTTTTTAAGTAGGACTTTGCATATACACATCTGAGAAGTTCCTCCCAAGTCTTCTCTTCAAACATGTATAATGCCTATGGCTATCTATCGTAGTTCTTGTTTTGACTGTTTCATTTGGTTAAGATTACAAGCCTAAGGCTATCTATCGTTTTAAGATGACTGATAACATTAGCTCAATTGTCCCGTATTCTGAGAAATTGAGCCAATGTGTTGGCGGGGTAGGCAGCATGTGAGACCCTACATTGATTGGGGAGGAGAACGAAGCATTTTTTTTATAAGAGTGTGGAAACCTTTTCCTAGCAACGCGTTTTAAAAACCTTGAGGGGAAGTTCGAAAGGGAAAGCCCAAAGAGGACAATATCCGCTAGCGGTGGGCTTGGATTCTTATAGATGGTATAAGAGCTAGTTACCGAGTGGTGTGTCGGCGAGGACGTTATGCCCCAAAGGGGGTGGACATCGAGCAGTGTGCCAACGAGGACGTTGGGCTCCGAAGGGAGGTGGAATGTGAGATCCCTTATCGATTGGAGAGGCCAGCAAGGATGCTGGTCCTGAAGAGGAGTGGATTGTGAGATCGCATATCGATTGGGGAGGAGAACGAAACATTCTTTGTAAGAGTGTGGACGAAGCATTCTTTATACGAGTGTGGAAACCTTGAGGGGAAGCCTAAAATGAAAAACCCTAAGAGGACAATATCTACCAGCGGGGGGCTTGAGCTGTTATACTGCATCTGATCTTGTAAAAGTTTTGCATACTACTTCAGCTCGTTATTTGGAAGGCTTTGAGATTTATTTCAAAACTTAGTAAATTACATGCATGATCCACAATTGTTTGAGCTGCTATTGTTAGTTCATTACATCTGTAATCATCTTATATAATCCTTTTTTTCTTCCAAATACTGAACTAGTATAATATTTTGCAGTGACTGTCATTATCCTTTTATTTTCCAACTTTCAAATGGCAATTTTCTGTGCACTCGGTATTGGGTATACAGGTGACTCCGAAACATTTCTATGCTATGTAATAGAGTTCTTCATCACTAATTCTTATCGTTCGAAACGTTTGCAGGCATGATTTTGCACGCTGCATTTCGGAAGCTGACTCTCGCCAAGCCCCCATCTACTGGGAGTCGAAAATAGGTAGCTACAGAACAAATATTTGTAATATTACATGTGAGCTATGTTTGAGCAAGCTTGCTGCAAGGTACCCACATCTGAATCTATGATAAGATAAAAAGTGCTGGTAATTCTGCATTCTAAAGTACAAAAAGCATTCGTTGTATTAGATAGAACACAGAGGTTTGAAGCTGTATTGGCATGTTAAGTTCAAAGAAAGTTAATTTTCAATTATCCCTGAAAATGGTACTACTAATCCTGTCTAAAGCCATAATAATGTTAGTAGAAAATGAATGATGTTCTTGTCGATTCTGCTAATGAATCTACCAAGCGATGAAGATTATAGCTTTTGTTAGTACAATGTATTTGGATGATTCAATCTAGTCTAGGTTTTTAATATAAAATATATATTCAGGTGTTTACATGGATGTTGTGTGATGTTCAATATA

mRNA sequence

TGAATCCCTTGATTTTGTTGCTTCGATTACGAATGAGTTTCTCACCCAATCCACTTTCCCTCAGCGTTCCTGACGGTGCTTTCGATTCATGGCTCCGCGATTCCGGCTACCTTGAAATTATCGATCAGCGCACCTCTGACGTCCACCGTCATTCCTCCGCCGCTGCTGCCCCCATCACATCTACCTCCGCCCCCACCACCCCTTTAGCTACTGGTTTCTTCATCTCCCTTTTCTCTCGAATCGTGACCTTTCTCTCCATTTTCACCCTTAACCCCTTTGCCAAGCTCTCTGCTGCGGATTTTTCTGGGCCAACCCCCTCCTGGACTTCTGGGTTTATTGGGTCTTTTGAGTCGTATTCGTTTCCTTCTTCGCCGGCACAAGCTCGTCTAAGAGCCCATGAGAATGCTAAACGCTATGCTCGCAATTACGCGTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTGTTGCCCTTCTTGGGTTGATATCATGTATGGCACTTTGGGACGTTGTTAAGTTTGGTTGCAACAGGTGGGGATTAGACAAGTATCCAGTTGTTTGGCAGTGTTTGGTTCGCGTTGCTCAGTGTGGTGATGACTGTCATTATCCTTTTATTTTCCAACTTTCAAATGGCAATTTTCTGTGCACTCGGTATTGGGTATACAGGCATGATTTTGCACGCTGCATTTCGGAAGCTGACTCTCGCCAAGCCCCCATCTACTGGGAGTCGAAAATAGGTAGCTACAGAACAAATATTTGTAATATTACATGTGAGCTATGTTTGAGCAAGCTTGCTGCAAGGTACCCACATCTGAATCTATGATAAGATAAAAAGTGCTGGTAATTCTGCATTCTAAAGTACAAAAAGCATTCGTTGTATTAGATAGAACACAGAGGTTTGAAGCTGTATTGGCATGTTAAGTTCAAAGAAAGTTAATTTTCAATTATCCCTGAAAATGGTACTACTAATCCTGTCTAAAGCCATAATAATGTTAGTAGAAAATGAATGATGTTCTTGTCGATTCTGCTAATGAATCTACCAAGCGATGAAGATTATAGCTTTTGTTAGTACAATGTATTTGGATGATTCAATCTAGTCTAGGTTTTTAATATAAAATATATATTCAGGTGTTTACATGGATGTTGTGTGATGTTCAATATA

Coding sequence (CDS)

ATGAGTTTCTCACCCAATCCACTTTCCCTCAGCGTTCCTGACGGTGCTTTCGATTCATGGCTCCGCGATTCCGGCTACCTTGAAATTATCGATCAGCGCACCTCTGACGTCCACCGTCATTCCTCCGCCGCTGCTGCCCCCATCACATCTACCTCCGCCCCCACCACCCCTTTAGCTACTGGTTTCTTCATCTCCCTTTTCTCTCGAATCGTGACCTTTCTCTCCATTTTCACCCTTAACCCCTTTGCCAAGCTCTCTGCTGCGGATTTTTCTGGGCCAACCCCCTCCTGGACTTCTGGGTTTATTGGGTCTTTTGAGTCGTATTCGTTTCCTTCTTCGCCGGCACAAGCTCGTCTAAGAGCCCATGAGAATGCTAAACGCTATGCTCGCAATTACGCGTCCCTGTTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTGTTGCCCTTCTTGGGTTGATATCATGTATGGCACTTTGGGACGTTGTTAAGTTTGGTTGCAACAGGTGGGGATTAGACAAGTATCCAGTTGTTTGGCAGTGTTTGGTTCGCGTTGCTCAGTGTGGTGATGACTGTCATTATCCTTTTATTTTCCAACTTTCAAATGGCAATTTTCTGTGCACTCGGTATTGGGTATACAGGCATGATTTTGCACGCTGCATTTCGGAAGCTGACTCTCGCCAAGCCCCCATCTACTGGGAGTCGAAAATAGGTAGCTACAGAACAAATATTTGTAATATTACATGTGAGCTATGTTTGAGCAAGCTTGCTGCAAGGTACCCACATCTGAATCTATGA

Protein sequence

MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYPVVWQCLVRVAQCGDDCHYPFIFQLSNGNFLCTRYWVYRHDFARCISEADSRQAPIYWESKIGSYRTNICNITCELCLSKLAARYPHLNL

Homology

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BLAST of Carg14705 vs. NCBI nr
Match: XP_023525232.1 (PRA1 family protein H-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 9.3e-100
Identity = 186/189 (98.41%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT 60
           MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT
Sbjct: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT 60

Query: 61  GFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARLR 120
           GFFISLFSRIVT  SIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARLR
Sbjct: 61  GFFISLFSRIVTLFSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARLR 120

Query: 121 AHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYPVVW 180
           AHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKF CNRWGLDKYPVVW
Sbjct: 121 AHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYPVVW 180

Query: 181 QCLVRVAQC 190
           QCLVRVAQC
Sbjct: 181 QCLVRVAQC 189

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BLAST of Carg14705 vs. NCBI nr
Match: XP_022941383.1 (PRA1 family protein H-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 348.2 bits (892), Expect = 2.5e-92
Identity = 178/200 (89.00%), Postives = 178/200 (89.00%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRH---SSAAAAPITSTSAPTTP 60
           MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRH               APTTP
Sbjct: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHXXXXXXXXXXXXXXXAPTTP 60

Query: 61  LATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120
           LATGFFISLFSRIVT LSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120

Query: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYP 180
           RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKF CNRWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180

Query: 181 VVWQCLVRVAQCGDDCHYPF 198
           VVWQCLVRVAQCG   H  F
Sbjct: 181 VVWQCLVRVAQCGMILHAAF 200

[Close]

BLAST of Carg14705 vs. NCBI nr
Match: XP_022941382.1 (PRA1 family protein H-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 344.0 bits (881), Expect = 4.6e-91
Identity = 175/192 (91.15%), Postives = 175/192 (91.15%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRH---SSAAAAPITSTSAPTTP 60
           MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRH               APTTP
Sbjct: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHXXXXXXXXXXXXXXXAPTTP 60

Query: 61  LATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120
           LATGFFISLFSRIVT LSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIVTLLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120

Query: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYP 180
           RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKF CNRWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180

Query: 181 VVWQCLVRVAQC 190
           VVWQCLVRVAQC
Sbjct: 181 VVWQCLVRVAQC 192

[Close]

BLAST of Carg14705 vs. NCBI nr
Match: XP_022981940.1 (PRA1 family protein H-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 1.4e-90
Identity = 175/200 (87.50%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRH---SSAAAAPITSTSAPTTP 60
           MSFSPNPLSLSVPD AFDSWLRDSGYLEIIDQRTSDVHRH               APTTP
Sbjct: 1   MSFSPNPLSLSVPDSAFDSWLRDSGYLEIIDQRTSDVHRHXXXXXXXXXXXXXXXAPTTP 60

Query: 61  LATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120
           LATGFFISLFSRIVT  SIFTLNPFAKLSAADFSGP PSWTSGFIGSFESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIVTLFSIFTLNPFAKLSAADFSGPAPSWTSGFIGSFESYSFPSSPAQA 120

Query: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYP 180
           RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKF CNRWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180

Query: 181 VVWQCLVRVAQCGDDCHYPF 198
           VVWQCLVRVAQCG   H  F
Sbjct: 181 VVWQCLVRVAQCGMILHAAF 200

[Close]

BLAST of Carg14705 vs. NCBI nr
Match: XP_022981939.1 (PRA1 family protein H-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 338.2 bits (866), Expect = 2.5e-89
Identity = 172/192 (89.58%), Postives = 172/192 (89.58%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRH---SSAAAAPITSTSAPTTP 60
           MSFSPNPLSLSVPD AFDSWLRDSGYLEIIDQRTSDVHRH               APTTP
Sbjct: 1   MSFSPNPLSLSVPDSAFDSWLRDSGYLEIIDQRTSDVHRHXXXXXXXXXXXXXXXAPTTP 60

Query: 61  LATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120
           LATGFFISLFSRIVT  SIFTLNPFAKLSAADFSGP PSWTSGFIGSFESYSFPSSPAQA
Sbjct: 61  LATGFFISLFSRIVTLFSIFTLNPFAKLSAADFSGPAPSWTSGFIGSFESYSFPSSPAQA 120

Query: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYP 180
           RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKF CNRWGLDKYP
Sbjct: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFCCNRWGLDKYP 180

Query: 181 VVWQCLVRVAQC 190
           VVWQCLVRVAQC
Sbjct: 181 VVWQCLVRVAQC 192

[Close]

BLAST of Carg14705 vs. TAIR10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H)

HSP 1 Score: 185.7 bits (470), Expect = 3.8e-47
Identity = 95/196 (48.47%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQR-------TSDVHRHSSAAAAPITSTSA 60
           M+FSPNPLSLSVPD AF+SWLRDSGYLE++D R                           
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  PTTPLATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSS 120
                         SR+VT  S+ T+NPF+KLSA DFSG T  WT+GFIG+ +SYSFPSS
Sbjct: 61  XXXXXXXXXXXXXXSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGL 180
             QAR+R HEN KR+ARNYA+LF++FF C LYQMP+AL+GL+  +ALW++ K+  ++W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVVWQCLVRVAQC 190
           D++P + +  + + QC
Sbjct: 181 DRHPSMRKLSIGIGQC 196

[Close]

BLAST of Carg14705 vs. Swiss-Prot
Match: sp|Q8LFP1|PRA1H_ARATH (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.9e-46
Identity = 95/196 (48.47%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQR-------TSDVHRHSSAAAAPITSTSA 60
           M+FSPNPLSLSVPD AF+SWLRDSGYLE++D R                           
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  PTTPLATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSS 120
                         SR+VT  S+ T+NPF+KLSA DFSG T  WT+GFIG+ +SYSFPSS
Sbjct: 61  XXXXXXXXXXXXXXSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGL 180
             QAR+R HEN KR+ARNYA+LF++FF C LYQMP+AL+GL+  +ALW++ K+  ++W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVVWQCLVRVAQC 190
           D++P + +  + + QC
Sbjct: 181 DRHPSMRKLSIGIGQC 196

[Close]

BLAST of Carg14705 vs. TrEMBL
Match: tr|A0A0A0L4P4|A0A0A0L4P4_CUCSA (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 6.0e-87
Identity = 162/189 (85.71%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT 60
           MSFS NPLSLSVPD AFDSWLRDSGYLEI+DQRTSD+HRHSS AA P   T     PLAT
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS-AAPPARPTPTAAAPLAT 60

Query: 61  GFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARLR 120
           GFFISLFSRI T LSIFTLNPFAKLSAADFSGPTPSWT+GF+G FESYSFPSSPAQARLR
Sbjct: 61  GFFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLR 120

Query: 121 AHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYPVVW 180
            HENAKRYARNYASLFVLFFVCTLYQMP+ALLGLISC+ALWD+VKF C+RWGLDKYPV+W
Sbjct: 121 VHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLW 180

Query: 181 QCLVRVAQC 190
           QCLVR+AQC
Sbjct: 181 QCLVRIAQC 188

[Close]

BLAST of Carg14705 vs. TrEMBL
Match: tr|A0A1S3CLE4|A0A1S3CLE4_CUCME (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 7.8e-87
Identity = 161/189 (85.19%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT 60
           MSFS NPLSLSVPD AFDSWLRDSGYLEI+DQRTSD+HRHSS AA P   T     PLAT
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS-AAPPTRPTPTAAAPLAT 60

Query: 61  GFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARLR 120
           GFFISLFSRI T LS+FTLNPF+KLSAADFSGPTPSWTSGF+G FESYSFPSSPAQARLR
Sbjct: 61  GFFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLR 120

Query: 121 AHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYPVVW 180
            HENAKRYARNYASLFVLFFVCTLYQMP+ALLGLISC+ALWD+VKF C+RWGLDKYPV+W
Sbjct: 121 VHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLW 180

Query: 181 QCLVRVAQC 190
           QCLVR+AQC
Sbjct: 181 QCLVRIAQC 188

[Close]

BLAST of Carg14705 vs. TrEMBL
Match: tr|A0A2I4H3Z1|A0A2I4H3Z1_9ROSI (PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 123/190 (64.74%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT 60
           M+FS NPLSLSVP+ AF+SWLRDSGYLEI+D RTS +         P T +   TT L  
Sbjct: 1   MAFSSNPLSLSVPEPAFESWLRDSGYLEILDHRTSSI---------PNTYSDPSTTTLTN 60

Query: 61  GFFIS-LFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARL 120
               S L S ++T LS+FT NPF+KL+  DFSG TPSW+ GF+G  +SYSFPSSPAQARL
Sbjct: 61  STITSGLISLLLTLLSLFTFNPFSKLTTEDFSGQTPSWSYGFVGFCDSYSFPSSPAQARL 120

Query: 121 RAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYPVV 180
           R HEN KRYARNYA+LF+LFF CTLYQMP+AL+GL+SC+ALWDV KF  NRWGLD +PV+
Sbjct: 121 RVHENVKRYARNYATLFILFFACTLYQMPLALIGLLSCLALWDVFKFCSNRWGLDHHPVI 180

Query: 181 WQCLVRVAQC 190
            QCLVR+AQC
Sbjct: 181 QQCLVRIAQC 181

[Close]

BLAST of Carg14705 vs. TrEMBL
Match: tr|A0A2I4H3X3|A0A2I4H3X3_9ROSI (PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 123/190 (64.74%), Postives = 146/190 (76.84%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAAAPITSTSAPTTPLAT 60
           M+FS NPLSLSVP+ AF+SWLRDSGYLEI+D RTS +         P T +   TT L  
Sbjct: 1   MAFSSNPLSLSVPEPAFESWLRDSGYLEILDHRTSSI---------PNTYSDPSTTTLTN 60

Query: 61  GFFIS-LFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQARL 120
               S L S ++T LS+FT NPF+KL+  DFSG TPSW+ GF+G  +SYSFPSSPAQARL
Sbjct: 61  STITSGLISLLLTLLSLFTFNPFSKLTTEDFSGQTPSWSYGFVGFCDSYSFPSSPAQARL 120

Query: 121 RAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYPVV 180
           R HEN KRYARNYA+LF+LFF CTLYQMP+AL+GL+SC+ALWDV KF  NRWGLD +PV+
Sbjct: 121 RVHENVKRYARNYATLFILFFACTLYQMPLALIGLLSCLALWDVFKFCSNRWGLDHHPVI 180

Query: 181 WQCLVRVAQC 190
            QCLVR+AQC
Sbjct: 181 QQCLVRIAQC 181

[Close]

BLAST of Carg14705 vs. TrEMBL
Match: tr|A0A2G9HDY2|A0A2G9HDY2_9LAMI (PRA1 family protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11631 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61
Identity = 120/192 (62.50%), Postives = 148/192 (77.08%), Query Frame = 0


Query: 1   MSFSPNPLSLSVPDGAFDSWLRDSGYLEIIDQRTSDVHRHSSAAA---APITSTSAPTTP 60
           M F+PNPLSLSVP+ AF+SWLRDSGYLE++DQRT+D+HR S+      +   ST+A  +P
Sbjct: 1   MVFAPNPLSLSVPEPAFESWLRDSGYLEVLDQRTTDLHRISATTKPTNSAADSTTASISP 60

Query: 61  LATGFFISLFSRIVTFLSIFTLNPFAKLSAADFSGPTPSWTSGFIGSFESYSFPSSPAQA 120
               F   LFS I T LS+ T NPF+KL+A DFSG TP WT  F GS ESYSFPSSP+QA
Sbjct: 61  KGVFFVSQLFSGIWTLLSLLTFNPFSKLAADDFSGDTPPWTIAFFGSSESYSFPSSPSQA 120

Query: 121 RLRAHENAKRYARNYASLFVLFFVCTLYQMPVALLGLISCMALWDVVKFGCNRWGLDKYP 180
           RLR HEN KR+ARNYASL VLFF C+LYQ+P+AL GLISC+A+WD+ K   +RWGLD+YP
Sbjct: 121 RLRVHENVKRFARNYASLLVLFFACSLYQLPIALFGLISCLAIWDLFKLSGDRWGLDRYP 180

Query: 181 VVWQCLVRVAQC 190
           ++ Q L+R+AQC
Sbjct: 181 IIRQTLIRIAQC 192

The following BLAST results are available for this feature:

BLAST of Carg14705 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525232.1	9.3e-100	98.41	PRA1 family protein H-like [Cucurbita pepo subsp. pepo]	[more]
XP_022941383.1	2.5e-92	89.00	PRA1 family protein H-like isoform X2 [Cucurbita moschata]	[more]
XP_022941382.1	4.6e-91	91.15	PRA1 family protein H-like isoform X1 [Cucurbita moschata]	[more]
XP_022981940.1	1.4e-90	87.50	PRA1 family protein H-like isoform X2 [Cucurbita maxima]	[more]
XP_022981939.1	2.5e-89	89.58	PRA1 family protein H-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg14705 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27540.1	3.8e-47	48.47	prenylated RAB acceptor 1.H	[more]

BLAST of Carg14705 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LFP1\|PRA1H_ARATH	6.9e-46	48.47	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of Carg14705 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4P4\|A0A0A0L4P4_CUCSA	6.0e-87	85.71	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1	[more]
tr\|A0A1S3CLE4\|A0A1S3CLE4_CUCME	7.8e-87	85.19	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
tr\|A0A2I4H3Z1\|A0A2I4H3Z1_9ROSI	1.1e-61	64.74	PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1	[more]
tr\|A0A2I4H3X3\|A0A2I4H3X3_9ROSI	1.1e-61	64.74	PRA1 family protein OS=Juglans regia OX=51240 GN=LOC109013262 PE=3 SV=1	[more]
tr\|A0A2G9HDY2\|A0A2G9HDY2_9LAMI	1.5e-61	62.50	PRA1 family protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11631 PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14705-RA	Carg14705-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 101..166 e-value: 1.0E-8 score: 34.8
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 2..189
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN 2	coord: 2..189

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14705	Cla023367	Watermelon (97103) v1	carwmB0304
Carg14705	Csa4G630550	Cucumber (Chinese Long) v2	carcuB0339
Carg14705	MELO3C025603	Melon (DHL92) v3.5.1	carmeB0317
Carg14705	ClCG11G017890	Watermelon (Charleston Gray)	carwcgB0305
Carg14705	CSPI04G23300	Wild cucumber (PI 183967)	carcpiB0345
Carg14705	Cucsa.122990	Cucumber (Gy14) v1	carcgyB0365
Carg14705	CmaCh01G012170	Cucurbita maxima (Rimu)	carcmaB0437
Carg14705	CmaCh09G008500	Cucurbita maxima (Rimu)	carcmaB0434
Carg14705	CmoCh01G012720	Cucurbita moschata (Rifu)	carcmoB0430
Carg14705	CmoCh09G008430	Cucurbita moschata (Rifu)	carcmoB0428
Carg14705	Lsi04G020540	Bottle gourd (USVL1VR-Ls)	carlsiB286
Carg14705	Cp4.1LG02g01780	Cucurbita pepo (Zucchini)	carcpeB0431
Carg14705	Cp4.1LG06g06770	Cucurbita pepo (Zucchini)	carcpeB0434
Carg14705	CsGy4G021670	Cucumber (Gy14) v2	carcgybB0323
Carg14705	MELO3C025603.2	Melon (DHL92) v3.6.1	carmedB0326
Carg14705	CsaV3_4G033520	Cucumber (Chinese Long) v3	carcucB0344
Carg14705	Cla97C11G223910	Watermelon (97103) v2	carwmbB0321
Carg14705	Bhi09G002823	Wax gourd	carwgoB0394

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14705	Carg17085	Silver-seed gourd	carcarB204

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14705	Watermelon (97103) v2	carwmbB0319