MELO3C024839 (gene) Melon (DHL92) v3.5.1

NameMELO3C024839
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative transcription factor
Locationchr7 : 17256319 .. 17259607 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATCTGACCCATCCTCCCAAATCTGCCTCTCTCTCTCTGGAAATTCTTTTCCGATTTTGCTGTAAGATTCTCTCTCATTCTCTCTCAATTTCATTTCTTATTCCCTGCTTCATTTTCTATGTAATTTTGCCTTCCCGCCTCTTTCATTTCTGTTGCCTGGCAAAGGTTTCTGAGAATCTGTAGAAAATGAACGGACTGGAAAATAGTTGTTCAGATCAAAGCCTTTGAAAATAGAAAACGCAGAATGATTCTGCCGGTTCTGTTGGTCATTAGAGGGAAATTTTGATTTGATTGTCTTGGGAACTAAGCTGGAAGGGTTCTGTTTCAATTTATGTTTTATTTTCTTTATTTTAGATCAAACTCTTGTAATTTGGCTTCAAATGCTACTTTACAATGTCCTTGTTTCGATTTCTTAAAATACTTTTTGGGGTTTGATTTTATGTTCTGTAGACTTTGATTTATCAATTTGCAGATTACAAAAAGCTTTCATTTTTTTTTTTTTTTTTGCCAAATTGTTGGAATGCTGCCTTTCTTATCTCAAATATTTGAATGAATGTAGATTTTAGTTCTTTACTTATGTTTACTTGTTTTCATGTTTGGATTTTCCTTTCCCTTTATTTTTAGTCGTTACCTATTTATCATCTGTTTGGAGATTTATATTCGTTTTCATGTTTTCGCAGGGTTGCTATTATCAGTTGTGGATGTGTTACCTTTAGGTATTTGGAGAATAATATGCTTTGGTTGAGCCTATCAATTGATGTACTTCGTAAAGTAGTGCATTTGAACCTCTATTGCAGGGTTATTTTGTAAATCACTTTTTGCATAGATAACACTGAATTATTCCTCACTGAGCTCCTTCTTTCAATCAGCCATGGGTTCCAATCACTTCTTTATTATTTCCTGTGATATCTACATTAGCTGAAAAGCTTCCTGTTAAATAGTTCTTTCTGCAGTGAGTATTCTCCTATTATCTCCCTCTTTCTCTGTTGTTGGTATTTCTCTTGTGCCTTCTGGGACAGAAGAATAGTTGTTCGTTTAAGGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACACGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAGTTGTCAGGTTTGTCAACTCAGTTCTTGCCTTGTGATTTTGCTCGTTGATTCACAACCGGATTAGTTACACATTTATTTTGTTGGAATCGTTTTGTATTTTTTTCCCCTGGAAGCTGCCATGATGAAACTTTTGGCATTTTTTCTGTTCCAGGCTGAGTATTTTCGGCAATTGCTTAAGCCAGTCACGTAGATTGAATAGGATTTATTTCTCTTAAGCTGGACTCCGTAAACTTCTTTTTGTCTTTGTTCCTGAAAGTATTCAGTAGATAATTCCCACCATAGTAGACCATTCCACAAAATTTTGAGGTAAGTTTTTATTCTTGCTAAGTTTAATCTCCCTTTAATTATTTTAGTTGTAACAAAGTAGTGATATTTCAAAATATTGATTAGGTGGTTGTTTTTCTGAATGGTTGGTACTGATACTTGGCAACTGCACAATTATAATTCCATGAATGCATCAATAGAGATCAAGCAACAGGAAAGCTGCCAAACGAATATCAACCATGAAAGTTGCATGTTTTCCAAATGTATGGGAGGGATGCAACGGTTTGCAATTCCACCATTACCCAGTTTTGAAGTGGAACAGCTAAATGTTGTTCAGGGATCACGTCATTGCTTATCCCCTCATTTCCAAAACTCACTTGTTACTTTCATATCTTATCAGAAAGAAAAGGAATCTATGTATTATGCTCATGCTGGACCTAGTGGGATGCCTGTGTCAAAATCAACTAATGGGTCCTATCCAAAAGGATTTCTTATCTTTGATCAATCTGGAAACCAGAAGAGATTGATGTATGATCCTATGTGTCTTGTTTCTTTGTCCTCAATTGTTTCTGAAAACAAGCGTTGTGGTTGGCTTGCAGAAAAAGGGGCAGTTAGAGACATTAATTCGGTCAAGTATTCTCCAAATACTCTGTCCAATGAGAATTATGTAGCTGATGAAGAGAGCAGTGAAATGCATGAAAACACCGAAGAAATAGATGCATTACTTTATTCAGACTACGATGGCACTGGTTGTAGTAGTGATGATGAAGTGACCAGCACAGGACATTCTCCAGAGATGATCAATGAGCATTGTGAAAAGGAAGAACAATGTCAAGAAACTACTACAGAAGTTGCTAGTTCTGAAGTCCCAAGAAAAAAGCAGAGAGTGCATGATGGGGGGTACATAAAATCACTACCAATTGCTGCGGTTTCTTGTGCAAGAGTTGAATCACAGAACTATGCCAATGATGCAGAATCAAGCTGTGGCATGGTCCATAAGGAAGAGGCTGGAACAGATATTGATTTTTGCCATTCTTCTTGCAAAAAAGATAGGATCAAGGAGACGTTGAGAGTACTCGAGAGTTTAGTTCCTGGTGCAAAGGGCAAGGACCCATTATTGGTTATTGACGAAGCTATCGATTACTTGAAGTCCTTAAAACACGAAGCTACTGCTTTAGGTGTGAGCTGCTATTAGATCGCATGCCCCCAACTATAGATATCGGTTAATTGGTTAAAATTAGGCCATCATGTTGTGGTAACTTAAGAATTCTTATTTTGAATTTTGATGGATGCAATGCCAGTTTGTTTGCTAAGTCCGAGCCACTTCCTTTCTCATACAAGGAAAATGTGATGACTATCGTGATAACATTGAACCTAGCCTGAAAATGAGTGAATAATTACTATTTTTATTCGTTGACTAGACATGATTATGTTTGATGCTTTCAAGGGACTAAAGATCAGCAGAGGAAAGCCACAAAGATTTGAACGCGTGGGATGTGATAGTGGTGGGTTATGCTGAGAAATTAAAGACCCCACTTTTTCCAGCAATTTGAAGAATCCCTCAAGGATTTGGCGCATGGGCGTTAGGTAACCAAGGTCCCACTTTCCACATTCTTTTTCTTTTTCTTTTTCTTTTTCTCTTTCTGTATCATGCTATGCCCTTACCCCCTTATTTTAGAGGTTATGCTATAAAAGTAGAGCTTCTCCCTTATGGTATTAGGTAGATGTTGCACGATGAAACTTTTGTGGGGAGTCTTGATTATGAGAGGAGTATGAAACTTTTGACTGAGCTCAGCTTTGGAGATGGATTTCACTTTTTGCTACTAGGTTTTGTGTGGATGTAATAATTGAGTT

mRNA sequence

AGATCTGACCCATCCTCCCAAATCTGCCTCTCTCTCTCTGGAAATTCTTTTCCGATTTTGCTGGTTGCTATTATCAGTTGTGGATGTGTTACCTTTAGGTATTTGGAGAATAATATGCTTTGGTTGAGCCTATCAATTGATGTACTTCGTAAAGTAGTGCATTTGAACCTCTATTGCAGGGTTATTTTGTAAATCACTTTTTGCATAGATAACACTGAATTATTCCTCACTGAGCTCCTTCTTTCAATCAGCCATGGGTTCCAATCACTTCTTTATTATTTCCTGTGATATCTACATTAGCTGAAAAGCTTCCTGTTAAATAGTTCTTTCTGCAGTGAGTATTCTCCTATTATCTCCCTCTTTCTCTGTTGTTGGTATTTCTCTTGTGCCTTCTGGGACAGAAGAATAGTTGTTCGTTTAAGGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACACGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAGTTGTCAGGCTGAGTATTTTCGGCAATTGCTTAAGCCAGTCACGTAGATTGAATAGGATTTATTTCTCTTAAGCTGGACTCCGTAAACTTCTTTTTGTCTTTGTTCCTGAAAGTATTCAGTAGATAATTCCCACCATAGTAGACCATTCCACAAAATTTTGAGGTGGTTGTTTTTCTGAATGGTTGGTACTGATACTTGGCAACTGCACAATTATAATTCCATGAATGCATCAATAGAGATCAAGCAACAGGAAAGCTGCCAAACGAATATCAACCATGAAAGTTGCATGTTTTCCAAATGTATGGGAGGGATGCAACGGTTTGCAATTCCACCATTACCCAGTTTTGAAGTGGAACAGCTAAATGTTGTTCAGGGATCACGTCATTGCTTATCCCCTCATTTCCAAAACTCACTTGTTACTTTCATATCTTATCAGAAAGAAAAGGAATCTATGTATTATGCTCATGCTGGACCTAGTGGGATGCCTGTGTCAAAATCAACTAATGGGTCCTATCCAAAAGGATTTCTTATCTTTGATCAATCTGGAAACCAGAAGAGATTGATGTATGATCCTATGTGTCTTGTTTCTTTGTCCTCAATTGTTTCTGAAAACAAGCGTTGTGGTTGGCTTGCAGAAAAAGGGGCAGTTAGAGACATTAATTCGGTCAAGTATTCTCCAAATACTCTGTCCAATGAGAATTATGTAGCTGATGAAGAGAGCAGTGAAATGCATGAAAACACCGAAGAAATAGATGCATTACTTTATTCAGACTACGATGGCACTGGTTGTAGTAGTGATGATGAAGTGACCAGCACAGGACATTCTCCAGAGATGATCAATGAGCATTGTGAAAAGGAAGAACAATGTCAAGAAACTACTACAGAAGTTGCTAGTTCTGAAGTCCCAAGAAAAAAGCAGAGAGTGCATGATGGGGGGTACATAAAATCACTACCAATTGCTGCGGTTTCTTGTGCAAGAGTTGAATCACAGAACTATGCCAATGATGCAGAATCAAGCTGTGGCATGGTCCATAAGGAAGAGGCTGGAACAGATATTGATTTTTGCCATTCTTCTTGCAAAAAAGATAGGATCAAGGAGACGTTGAGAGTACTCGAGAGTTTAGTTCCTGGTGCAAAGGGCAAGGACCCATTATTGGTTATTGACGAAGCTATCGATTACTTGAAGTCCTTAAAACACGAAGCTACTGCTTTAGGTGTGAGCTGCTATTAGATCGCATGCCCCCAACTATAGATATCGGTTAATTGGTTAAAATTAGGCCATCATGTTGTGGTAACTTAAGAATTCTTATTTTGAATTTTGATGGATGCAATGCCAGTTTGTTTGCTAAGTCCGAGCCACTTCCTTTCTCATACAAGGAAAATGTGATGACTATCGTGATAACATTGAACCTAGCCTGAAAATGAGTGAATAATTACTATTTTTATTCGTTGACTAGACATGATTATGTTTGATGCTTTCAAGGGACTAAAGATCAGCAGAGGAAAGCCACAAAGATTTGAACGCGTGGGATGTGATAGTGGTGGGTTATGCTGAGAAATTAAAGACCCCACTTTTTCCAGCAATTTGAAGAATCCCTCAAGGATTTGGCGCATGGGCGTTAGGTAACCAAGGTCCCACTTTCCACATTCTTTTTCTTTTTCTTTTTCTTTTTCTCTTTCTGTATCATGCTATGCCCTTACCCCCTTATTTTAGAGGTTATGCTATAAAAGTAGAGCTTCTCCCTTATGGTATTAGGTAGATGTTGCACGATGAAACTTTTGTGGGGAGTCTTGATTATGAGAGGAGTATGAAACTTTTGACTGAGCTCAGCTTTGGAGATGGATTTCACTTTTTGCTACTAGGTTTTGTGTGGATGTAATAATTGAGTT

Coding sequence (CDS)

ATGGTTGGTACTGATACTTGGCAACTGCACAATTATAATTCCATGAATGCATCAATAGAGATCAAGCAACAGGAAAGCTGCCAAACGAATATCAACCATGAAAGTTGCATGTTTTCCAAATGTATGGGAGGGATGCAACGGTTTGCAATTCCACCATTACCCAGTTTTGAAGTGGAACAGCTAAATGTTGTTCAGGGATCACGTCATTGCTTATCCCCTCATTTCCAAAACTCACTTGTTACTTTCATATCTTATCAGAAAGAAAAGGAATCTATGTATTATGCTCATGCTGGACCTAGTGGGATGCCTGTGTCAAAATCAACTAATGGGTCCTATCCAAAAGGATTTCTTATCTTTGATCAATCTGGAAACCAGAAGAGATTGATGTATGATCCTATGTGTCTTGTTTCTTTGTCCTCAATTGTTTCTGAAAACAAGCGTTGTGGTTGGCTTGCAGAAAAAGGGGCAGTTAGAGACATTAATTCGGTCAAGTATTCTCCAAATACTCTGTCCAATGAGAATTATGTAGCTGATGAAGAGAGCAGTGAAATGCATGAAAACACCGAAGAAATAGATGCATTACTTTATTCAGACTACGATGGCACTGGTTGTAGTAGTGATGATGAAGTGACCAGCACAGGACATTCTCCAGAGATGATCAATGAGCATTGTGAAAAGGAAGAACAATGTCAAGAAACTACTACAGAAGTTGCTAGTTCTGAAGTCCCAAGAAAAAAGCAGAGAGTGCATGATGGGGGGTACATAAAATCACTACCAATTGCTGCGGTTTCTTGTGCAAGAGTTGAATCACAGAACTATGCCAATGATGCAGAATCAAGCTGTGGCATGGTCCATAAGGAAGAGGCTGGAACAGATATTGATTTTTGCCATTCTTCTTGCAAAAAAGATAGGATCAAGGAGACGTTGAGAGTACTCGAGAGTTTAGTTCCTGGTGCAAAGGGCAAGGACCCATTATTGGTTATTGACGAAGCTATCGATTACTTGAAGTCCTTAAAACACGAAGCTACTGCTTTAGGTGTGAGCTGCTATTAG
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046983 protein dimerization activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49247melon EST collection version 4.0transcribed_cluster
MU63433melon EST collection version 4.0transcribed_cluster
MU64984melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024839T2MELO3C024839T2mRNA
MELO3C024839T3MELO3C024839T3mRNA
MELO3C024839T1MELO3C024839T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU63433MU63433transcribed_cluster
MU64984MU64984transcribed_cluster
MU49247MU49247transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36066FAMILY NOT NAMEDcoord: 6..350
score: 2.1
NoneNo IPR availablePANTHERPTHR36066:SF2TRANSCRIPTION FACTOR SAC51-RELATEDcoord: 6..350
score: 2.1