MU63433 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU63433
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Conserved peptide upstream open reading frame 37
Location	chr7 : 17256322 .. 17258035 (+)
Sequence length	866

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TCTGACCCATCCTCCCAAATCTGCCTCTCTCTCTCTGGAAATTCTTTTCCGATTTTGCTGGTTGCTATTATCAGTTGTGGATGTGTTACCTTTAGGTATTTGGAGAATAATATGCTTTGGTTGAGCCTATCAATTGATGTACTTCGTAAAGTAGTGCATTTGAACCTCTATTGCAGGGTTATTTTGTAAATCACTTTTTGCATAGATAACACTGAATTATTCCTCACTGAGCTCCTTCTTTCAATCAGCCATGGGTTCCAATCACTTCTTTATTATTTCCTGTGATATCTACATTAGCTGAAAAGCTTCCTGTTAAATAGTTCTTTCTGCAGTGAGTATTCTCCTATTATCTCCCTCTTTCTCTGTTGTTGGTATTTCTCTTGTGCCTTCTGGGACAGAAGAATAGTTGTTCGTTTAAGGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACACGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAGTTGTCAGGCTGAGTATTTTCGGCAATTGCTTAAGCCAGTCACGTAGATTGAATAGGATTTATTTCTCTTAAGCTGGACTCCGTAAACTTCTTTTTGTCTTTGTTCCTGAAAGTATTCAGTAGATAATTCCCACCATAGTAGACCATTCCACAAAATTTTGAGGTGGTTGTTTTTCTGAATGGTTGGTACTGATACTTGGCAACTGCACAATTATAATTCCATGAATGCATCAATAGAGATCAAGCAACAGGAAAGCTGCCAAACGAATATCAACCATGAAAGTTGCATGTTTTCCAAATGTATGGGAGGGATGCAAC

Library


Library category	ESTs
melon CM-PEa library	1

Homology

[Close]

BLAST of MU63433 vs. TrEMBL
Match: A0A0B0MJS2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26115 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 66/137 (48.18%), Postives = 80/137 (58.39%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT*IE*DLF 493
           MVCQAA+QTRFRALKHENGIAGKPTI+VRVIACFQP++ CQAEYFR LLKPVT       
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT------- 60

Query: 494 LLSWTP*TSFCLCS*KYSVDNSHHSRPFHKILRWLFF*MVGTDTWQLHNYNSMNASIEIK 553
            +   P    C  S     +NS           W+F       +W+L   + M+AS+E +
Sbjct: 61  -IEHCPSPGVC-SSWMVKTNNS-----------WVF---PQHSSWRLPELSCMSASLEPR 114

Query: 554 QQESCQTNINHESCMFS 613
           Q E     IN  S + S
Sbjct: 121 QPECLPACINPSSHILS 114

Query: 614  673
           
Sbjct: 181  114

Query: 674  733
           
Sbjct: 241  114

Query: 734  793
           
Sbjct: 301  114

Query: 794  845
           
Sbjct: 361  114

[Close]

BLAST of MU63433 vs. TrEMBL
Match: A0A0A0KVT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G113180 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-20
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQA+YFRQLLKPVT
Sbjct: 1   MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAKYFRQLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. TrEMBL
Match: W9R7U4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011398 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.1e-19
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQ CQAEYFR LLKPVT
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. TrEMBL
Match: A0A0A0K458_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066260 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAA+QTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. TrEMBL
Match: A0A0D2RD15_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G224400 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.4e-19
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAA+QTRFRALKHENGIAGKPTI+VRVIACFQP++ CQAEYFR LLKPVT
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. TAIR10
Match: AT5G50011.1 (AT5G50011.1 conserved peptide upstream open reading frame 37)

HSP 1 Score: 88.2 bits (217), Expect = 9.0e-18
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQ+A QTRFR LKHE+GI G   I+VRVIACFQPLQ CQAEYFRQLLKPVT
Sbjct: 1   MVCQSAGQTRFRTLKHEHGITGN--IVVRVIACFQPLQDCQAEYFRQLLKPVT 51

Query: 494  553
           
Sbjct: 61   51

Query: 554  593
           
Sbjct: 121  51

[Close]

BLAST of MU63433 vs. TAIR10
Match: AT5G09461.1 (AT5G09461.1 conserved peptide upstream open reading frame 43)

HSP 1 Score: 78.6 bits (192), Expect = 7.1e-15
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHEN-GIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MV Q+A QTRFR  K+EN G + +PTI+VRVIACFQP+ +CQAEYFR +LKPVT
Sbjct: 1   MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54

Query: 494  553
           
Sbjct: 61   54

Query: 554  593
           
Sbjct: 121  54

[Close]

BLAST of MU63433 vs. TAIR10
Match: AT5G64341.1 (AT5G64341.1 conserved peptide upstream open reading frame 40)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-14
Identity = 35/53 (66.04%), Postives = 41/53 (77.36%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQ+  +TRFR LK+E G A + TI+VRVI C+QP+ +CQAEYFR LLKPVT
Sbjct: 1   MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYFRLLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. NCBI nr
Match: gi|728817163|gb|KHG02368.1| (hypothetical protein F383_26115 [Gossypium arboreum])

HSP 1 Score: 114.0 bits (284), Expect = 4.4e-22
Identity = 66/137 (48.18%), Postives = 80/137 (58.39%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT*IE*DLF 493
           MVCQAA+QTRFRALKHENGIAGKPTI+VRVIACFQP++ CQAEYFR LLKPVT       
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIVVRVIACFQPMEDCQAEYFRHLLKPVT------- 60

Query: 494 LLSWTP*TSFCLCS*KYSVDNSHHSRPFHKILRWLFF*MVGTDTWQLHNYNSMNASIEIK 553
            +   P    C  S     +NS           W+F       +W+L   + M+AS+E +
Sbjct: 61  -IEHCPSPGVC-SSWMVKTNNS-----------WVF---PQHSSWRLPELSCMSASLEPR 114

Query: 554 QQESCQTNINHESCMFS 613
           Q E     IN  S + S
Sbjct: 121 QPECLPACINPSSHILS 114

Query: 614  673
           
Sbjct: 181  114

Query: 674  733
           
Sbjct: 241  114

Query: 734  793
           
Sbjct: 301  114

Query: 794  845
           
Sbjct: 361  114

[Close]

BLAST of MU63433 vs. NCBI nr
Match: gi|700198577|gb|KGN53735.1| (hypothetical protein Csa_4G113180 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21
Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQ+CQA+YFRQLLKPVT
Sbjct: 1   MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAKYFRQLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. NCBI nr
Match: gi|703093100|ref|XP_010094825.1| (hypothetical protein L484_011398 [Morus notabilis])

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAA+QTRFRALKHENGIAGKPTIIVRVIACFQPLQ CQAEYFR LLKPVT
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIIVRVIACFQPLQDCQAEYFRHLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. NCBI nr
Match: gi|700188536|gb|KGN43769.1| (hypothetical protein Csa_7G066260 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 2.4e-20
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT 493
           MVCQAA+QTRFRALKHENGIAGKPTIIV+VIACFQPLQ+CQAEYFR LLKPVT
Sbjct: 1   MVCQAASQTRFRALKHENGIAGKPTIIVKVIACFQPLQNCQAEYFRHLLKPVT 53

Query: 494  553
           
Sbjct: 61   53

Query: 554  593
           
Sbjct: 121  53

[Close]

BLAST of MU63433 vs. NCBI nr
Match: gi|590688176|ref|XP_007042873.1| (Sequence-specific DNA binding transcription factors,transcription regulators, putative [Theobroma cacao])

HSP 1 Score: 107.8 bits (268), Expect = 3.1e-20
Identity = 63/137 (45.99%), Postives = 75/137 (54.74%), Query Frame = 2


Query: 434 MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQSCQAEYFRQLLKPVT*IE*DLF 493
           MVCQAA+QTRFRALK+ENGIAGK TI+VRVIACFQP++ CQAEYFR LLKP+        
Sbjct: 1   MVCQAASQTRFRALKYENGIAGKSTIVVRVIACFQPMEDCQAEYFRHLLKPIEHCSYPGG 60

Query: 494 LLSWTP*TSFCLCS*KYSVDNSHHSRPFHKILRWLFF*MVGTDTWQLHNYNSMNASIEIK 553
             SW               +NS           W F       TWQL   + M+ S+E +
Sbjct: 61  CSSW-----------MVQTNNS-----------WFF---PQHSTWQLPKLSCMSTSLEPR 112

Query: 554 QQESCQTNINHESCMFS 613
           Q E     IN  + MFS
Sbjct: 121 QPERLPACINPSTHMFS 112

Query: 614  673
           
Sbjct: 181  112

Query: 674  733
           
Sbjct: 241  112

Query: 734  793
           
Sbjct: 301  112

Query: 794  845
           
Sbjct: 361  112

The following BLAST results are available for this feature:

BLAST of MU63433 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B0MJS2_GOSAR	1.7e-20	48.18	Uncharacterized protein OS=Gossypium arboreum GN=F383_26115 PE=4 SV=1	[more]
A0A0A0KVT2_CUCSA	2.2e-20	96.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G113180 PE=4 SV=1	[more]
W9R7U4_9ROSA	1.1e-19	94.34	Uncharacterized protein OS=Morus notabilis GN=L484_011398 PE=4 SV=1	[more]
A0A0A0K458_CUCSA	1.8e-19	92.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066260 PE=4 SV=1	[more]
A0A0D2RD15_GOSRA	5.4e-19	88.68	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G224400 PE=4 SV=1	[more]

BLAST of MU63433 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50011.1	9.0e-18	81.13	conserved peptide upstream open reading frame 37	[more]
AT5G09461.1	7.1e-15	68.52	conserved peptide upstream open reading frame 43	[more]
AT5G64341.1	1.6e-14	66.04	conserved peptide upstream open reading frame 40	[more]

BLAST of MU63433 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|728817163\|gb\|KHG02368.1\|	4.4e-22	48.18	hypothetical protein F383_26115 [Gossypium arboreum]	[more]
gi\|700198577\|gb\|KGN53735.1\|	2.8e-21	96.23	hypothetical protein Csa_4G113180 [Cucumis sativus]	[more]
gi\|703093100\|ref\|XP_010094825.1\|	1.4e-20	94.34	hypothetical protein L484_011398 [Morus notabilis]	[more]
gi\|700188536\|gb\|KGN43769.1\|	2.4e-20	92.45	hypothetical protein Csa_7G066260 [Cucumis sativus]	[more]
gi\|590688176\|ref\|XP_007042873.1\|	3.1e-20	45.99	Sequence-specific DNA binding transcription factors,transcription regulators, pu...	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024839	MELO3C024839	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
PEa0012I05	PEa0012I05	EST