CmaCh16G002700 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTCGTTCGGACCCTTCAAACTTTCCTGTGTTCTTCGAGTGGTTTGGTTTAGATCTGATCCATCTTCGCAAATCTGGCTCTTTCTGGAAATTCTCTTCCGATTTTCTTCTGTAAGATTCTTTCTCATTTTCTAGCAATTTCAGCTCTTGATTCCTGCTTGTTTCTCTCGTGTATTTTTGTTTTCGCGCTTTTCTGATTCTGTTGCCTGGCAAAGGTTTCTGAGAATCTGAAGAGAATTAATCGACATGGAAATAGTTGTTCAGAGCTTTGGGAAGTAGGAAATGCCGAATGATTTTGTCGGTTCTGTTGTTTGCTAGATGGAAATTTGATTTGATTGTCTTGGGAACTAAGCTGAAACGGATCATTAAAATTTCTGTTTTAAAATAAGATCTAATTTCTTCGTTTTCTTGGGGATCAAAAAGTGGCTTGTTTTTCCAAGAAGATTGTCTGAAATTTCTCTTTGAAAATTGAAATATTGTTCTTCTGCTTCAAATTCTCTTTCACATTCTTAAAATTCCTTTTGGATTTTGTATATATGTTCTGTAGACATTGACATATCTCTCTTTTGCAGCTTAGAAAAAGCTAGAAATTTCCTCCCAAATAGTTGGGTATCCTGTTTCTTTCGTCATATGAAATGCTGGCTTTCTTCAGTGTACTGTCTTATGTCAAATATTTGAATGAATGTAGATTGTTGGAGTTCTTTACTTTTTTCTTGTTTAGAGTTTATTTTGTTATTTTCAATCCTTTGTATTTATTGTAATTTTTCATGTTTTTGCAGGGGCACCATTATAAAAGTTGTGGATGTGTTAACTTTACGTATTGAGAGAATAATATGCTTTGGTTGAGCATATCCATTGATGTATTTCGTAAAGTTGTGCATTTGATCGTCTATTGCAGGGTTATTTTGTAGATCACTTTTTGTATAGATAACACTGAATTGTTCCTCCCTGAGCTCCTTTTTTCTATCATCCATGGGTTCCAATCACTTTTTTATCATTTCCTGTAATATCCACATTAGCTGAAAAGCTTCCTGTCCTCAAACACCATTTTGGTTTTGGTCTTCTGTTTTAGTCTTATTTTTTCTGCCCCTTTGTCAAGGAATCTAGATAGCTCATTAAATTTCCAGTTAAATAGTTCTTTCTGCAGTGAATATTCTCCGTTTAAGGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACATGAGAATGGAATTGCAGGAAAACCAACAATTATTGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAATTGTCAGGTTTGTCAACTCAGTCTCTGCATCGTGGTTTTGCTTGTTGATTAACAATTGAATTATTTGAATCCCTCTGCTTGTTCCCCCTGAACTTGGCTCGTTCACTACCATGATTAAACTTTTGGTTTTTCCTGTTCCAGGCCGAGTATTTTCGACAATTGCTTAAGCCTGTCACGTAGATTGAGTAGCATTTATTTCTCTTAAGCTGGACTCTTGCGAACTTCTTTTTCTCTTTGTTCCTGAAAGCATTTTGCAGATAACTCCCATAGCAAACTAGAGCACAACATTTTGAGGTAGTTCTTGCCACCTGCTTGCTAAGTTTATTCTCCTTATGTTATTTCGGTTGTTTCGAAATAGTTATATTTTGAAATATTGATTAGGTGGTTGTTTTGCGGTATGGTTGGGACTGATAACTCTCGGCTTGATTTTGAGCATTTTGCTTGGCAACTGCACAATCGTGATTCCATGAATGCACCAGTAGAGATCAAGCAACAGGAAAGCTTACAAGGGAATATCAACTGTGGAAATTGCATACTTCCCACATGTGTGGGAGGAATGCAAGGGTTTGCAATTCCACCATTACCCAGTTTTAAAGTGGAACAGCTAAATGTTGTTCAGGAGTCACGTCAATGCTTACCCCCTCATTTCCAGAACTCACTTGGTACTCCAATGCCTTGGCAGAAAGGAAAGGAATCTATGCATTATGCTCATGCTGGACCTAGTGGGATGCCTGTGTCAAAATCAAATAATGGCTCCTATCCGAAAGGTTTTCTTATCTTTGATCAATCTGGAAACCAGAAGAGATTGATGTATGCTCCTATGTATCCTCCTGTCTATATTCCCTCAACTTTTGCTGAAACCAAGCGTTGTGGTTGGCTTGAAGAAGAAGGGGCAGCTGGAGAGATTAATTCTGTCAAGTATTTTCCAAATACTCTGTCCAATGAGAATTATGTAGGTGATGGAGAGAGTGAAATGCATGAAAACACGGAAGAAATAGATGCATTACTTTACTCAGACTACGATGGTACTGGTTGTAGTAGCGACGATGAAGTGACTAGCACAGGACATTCCCCAGAGATGATCCATGATCATTGTGAGAAGGAAGAACAATGTCAAGAAACTACTACAGAAGCTGCTAGTTCTAATGGCCCAAGAAAAAGGCAGAGAGTGCATGATGGGGGCTACGTAAAATCACTGCCAATTGCTACGGCTTCTTCTGCAAGAGTTGAATTACAGAAGTTTGTCAATGACGCAGAATCAAGCTGTGGCATGGTCCATGAGGAAGAGGTTGGAACAGATGTTGATTTTTGCCGTTCTTCTTGCAAGAAAGACAGGATCAAGGAGACGTTGAGAGTACTTGAGAGTTTAGTTCCTGATGCTAAGGGAAAAGACCCATTGTTGGTTATTGATGAAGCTATTGATTACTTGAAGTCCTTAAAACATGAAGCTAGCGCTCTAGGTGTGAGCTGCTATTAGATCGCATGCCCCGAATTTAGATGTTGATGGTGTGGTAACTTAAGAATTCTTATTTTGGATTTTGATGGATGCAAGATCAGTTTGTGATGGGTTAGCAAATGGAGGTATAATGTCTGGATAACATTGAACCCAGCCGGTAATGAGTGAATTATTGCCATTTTTATTCGTTGACAAGACATGATTATGTTTGATGCTTTTAAGGGACTAAAGATCAGGGGAAAGTCACAAAGATTTGAACGCATGGGATGTGATAGTGGTGGGTTATGCTGAGAATTTAAAGACCCCACCTTTTCCAGCAATTTGGAGAATCTCCCTGGATTGAGTGCATGCGTGTTAGGTAACTGAGGTCCCACTTTCCACACTTTTTTCTGGATTATGTGCTATGTCTTTACCCTCATTACTCATTTATAGAGATTGTGCTGTAAAAGTGGAGCTTGTCCCTTGTGGTGTTAGGTAGATCTTGCACGGTTCGAGTTTTGATTATGAGAGCACTATGAAACTTTTGAAACTTTTGACTGATATCAGCTTTGGAGATAGATTTTAGTTTTGCTATTAGGTGTTGCGTTGATGTAATAATTGAGGTGTGAATGCTTTTGTGAGTCTATCATGTTACATGTACTGCTTTCTCTATGCTTGTACTTGATCTAAGCCTTGAGAATACTGGCTGTATAATTATATTGTTGATGAATTATACCATACGAGATTGTTAGCCAA TGTTCGTTCGGACCCTTCAAACTTTCCTGTGTTCTTCGAGTGGTTTGGTTTAGATCTGATCCATCTTCGCAAATCTGGCTCTTTCTGGAAATTCTCTTCCGATTTTCTTCTGGGCACCATTATAAAAGTTGTGGATGTGTTAACTTTACGTATTGAGAGAATAATATGCTTTGGTTGAGCATATCCATTGATGTATTTCGTAAAGTTGTGCATTTGATCGTCTATTGCAGGGTTATTTTGTAGATCACTTTTTGTATAGATAACACTGAATTGTTCCTCCCTGAGCTCCTTTTTTCTATCATCCATGGGTTCCAATCACTTTTTTATCATTTCCTGTAATATCCACATTAGCTGAAAAGCTTCCTGTCCTCAAACACCATTTTGGTTTTGGTCTTCTGTTTTAGTCTTATTTTTTCTGCCCCTTTGTCAAGGAATCTAGATAGCTCATTAAATTTCCAGTTAAATAGTTCTTTCTGCAGTGAATATTCTCCGTTTAAGGTTCAGAAGTAGTTATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACATGAGAATGGAATTGCAGGAAAACCAACAATTATTGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACAATTGCTTAAGCCTCATTTTGCAGATAACTCCCATAGCAAACTAGAGCACAACATTTTGAGGTGGTTGTTTTGCGGTATGGTTGGGACTGATAACTCTCGGCTTGATTTTGAGCATTTTGCTTGGCAACTGCACAATCGTGATTCCATGAATGCACCAGTAGAGATCAAGCAACAGGAAAGCTTACAAGGGAATATCAACTGTGGAAATTGCATACTTCCCACATGTGTGGGAGGAATGCAAGGGTTTGCAATTCCACCATTACCCAGTTTTAAAGTGGAACAGCTAAATGTTGTTCAGGAGTCACGTCAATGCTTACCCCCTCATTTCCAGAACTCACTTGGTACTCCAATGCCTTGGCAGAAAGGAAAGGAATCTATGCATTATGCTCATGCTGGACCTAGTGGGATGCCTGTGTCAAAATCAAATAATGGCTCCTATCCGAAAGGTTTTCTTATCTTTGATCAATCTGGAAACCAGAAGAGATTGATGTATGCTCCTATGTATCCTCCTGTCTATATTCCCTCAACTTTTGCTGAAACCAAGCGTTGTGGTTGGCTTGAAGAAGAAGGGGCAGCTGGAGAGATTAATTCTGTCAAGTATTTTCCAAATACTCTGTCCAATGAGAATTATGTAGGTGATGGAGAGAGTGAAATGCATGAAAACACGGAAGAAATAGATGCATTACTTTACTCAGACTACGATGGTACTGGTTGTAGTAGCGACGATGAAGTGACTAGCACAGGACATTCCCCAGAGATGATCCATGATCATTGTGAGAAGGAAGAACAATGTCAAGAAACTACTACAGAAGCTGCTAGTTCTAATGGCCCAAGAAAAAGGCAGAGAGTGCATGATGGGGGCTACGTAAAATCACTGCCAATTGCTACGGCTTCTTCTGCAAGAGTTGAATTACAGAAGTTTGTCAATGACGCAGAATCAAGCTGTGGCATGGTCCATGAGGAAGAGGTTGGAACAGATGTTGATTTTTGCCGTTCTTCTTGCAAGAAAGACAGGATCAAGGAGACGTTGAGAGTACTTGAGAGTTTAGTTCCTGATGCTAAGGGAAAAGACCCATTGTTGGTTATTGATGAAGCTATTGATTACTTGAAGTCCTTAAAACATGAAGCTAGCGCTCTAGGTGTGAGCTGCTATTAGATCGCATGCCCCGAATTTAGATGTTGATGGTGTGGTAACTTAAGAATTCTTATTTTGGATTTTGATGGATGCAAGATCAGTTTGTGATGGGTTAGCAAATGGAGGTATAATGTCTGGATAACATTGAACCCAGCCGGTAATGAGTGAATTATTGCCATTTTTATTCGTTGACAAGACATGATTATGTTTGATGCTTTTAAGGGACTAAAGATCAGGGGAAAGTCACAAAGATTTGAACGCATGGGATGTGATAGTGGTGGGTTATGCTGAGAATTTAAAGACCCCACCTTTTCCAGCAATTTGGAGAATCTCCCTGGATTGAGTGCATGCGTGTTAGGTAACTGAGGTCCCACTTTCCACACTTTTTTCTGGATTATGTGCTATGTCTTTACCCTCATTACTCATTTATAGAGATTGTGCTGTAAAAGTGGAGCTTGTCCCTTGTGGTGTTAGGTAGATCTTGCACGGTTCGAGTTTTGATTATGAGAGCACTATGAAACTTTTGAAACTTTTGACTGATATCAGCTTTGGAGATAGATTTTAGTTTTGCTATTAGGTGTTGCGTTGATGTAATAATTGAGGTGTGAATGCTTTTGTGAGTCTATCATGTTACATGTACTGCTTTCTCTATGCTTGTACTTGATCTAAGCCTTGAGAATACTGGCTGTATAATTATATTGTTGATGAATTATACCATACGAGATTGTTAGCCAA ATGGTGTGCCAAGCTGCAACCCAGACAAGATTTCGGGCATTGAAACATGAGAATGGAATTGCAGGAAAACCAACAATTATTGTTAGAGTGATCGCATGCTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACAATTGCTTAAGCCTCATTTTGCAGATAACTCCCATAGCAAACTAGAGCACAACATTTTGAGGTGGTTGTTTTGCGGTATGGTTGGGACTGATAACTCTCGGCTTGATTTTGAGCATTTTGCTTGGCAACTGCACAATCGTGATTCCATGAATGCACCAGTAGAGATCAAGCAACAGGAAAGCTTACAAGGGAATATCAACTGTGGAAATTGCATACTTCCCACATGTGTGGGAGGAATGCAAGGGTTTGCAATTCCACCATTACCCAGTTTTAAAGTGGAACAGCTAAATGTTGTTCAGGAGTCACGTCAATGCTTACCCCCTCATTTCCAGAACTCACTTGGTACTCCAATGCCTTGGCAGAAAGGAAAGGAATCTATGCATTATGCTCATGCTGGACCTAGTGGGATGCCTGTGTCAAAATCAAATAATGGCTCCTATCCGAAAGGTTTTCTTATCTTTGATCAATCTGGAAACCAGAAGAGATTGATGTATGCTCCTATGTATCCTCCTGTCTATATTCCCTCAACTTTTGCTGAAACCAAGCGTTGTGGTTGGCTTGAAGAAGAAGGGGCAGCTGGAGAGATTAATTCTGTCAAGTATTTTCCAAATACTCTGTCCAATGAGAATTATGTAGGTGATGGAGAGAGTGAAATGCATGAAAACACGGAAGAAATAGATGCATTACTTTACTCAGACTACGATGGTACTGGTTGTAGTAGCGACGATGAAGTGACTAGCACAGGACATTCCCCAGAGATGATCCATGATCATTGTGAGAAGGAAGAACAATGTCAAGAAACTACTACAGAAGCTGCTAGTTCTAATGGCCCAAGAAAAAGGCAGAGAGTGCATGATGGGGGCTACGTAAAATCACTGCCAATTGCTACGGCTTCTTCTGCAAGAGTTGAATTACAGAAGTTTGTCAATGACGCAGAATCAAGCTGTGGCATGGTCCATGAGGAAGAGGTTGGAACAGATGTTGATTTTTGCCGTTCTTCTTGCAAGAAAGACAGGATCAAGGAGACGTTGAGAGTACTTGAGAGTTTAGTTCCTGATGCTAAGGGAAAAGACCCATTGTTGGTTATTGATGAAGCTATTGATTACTTGAAGTCCTTAAAACATGAAGCTAGCGCTCTAGGTGTGAGCTGCTATTAG MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPHFADNSHSKLEHNILRWLFCGMVGTDNSRLDFEHFAWQLHNRDSMNAPVEIKQQESLQGNINCGNCILPTCVGGMQGFAIPPLPSFKVEQLNVVQESRQCLPPHFQNSLGTPMPWQKGKESMHYAHAGPSGMPVSKSNNGSYPKGFLIFDQSGNQKRLMYAPMYPPVYIPSTFAETKRCGWLEEEGAAGEINSVKYFPNTLSNENYVGDGESEMHENTEEIDALLYSDYDGTGCSSDDEVTSTGHSPEMIHDHCEKEEQCQETTTEAASSNGPRKRQRVHDGGYVKSLPIATASSARVELQKFVNDAESSCGMVHEEEVGTDVDFCRSSCKKDRIKETLRVLESLVPDAKGKDPLLVIDEAIDYLKSLKHEASALGVSCY
BLAST of CmaCh16G002700 vs. Swiss-Prot
Match: SAC51_ARATH (Transcription factor SAC51 OS=Arabidopsis thaliana GN=SAC51 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.8e-27 Identity = 106/302 (35.10%), Postives = 144/302 (47.68%), Query Frame = 1
BLAST of CmaCh16G002700 vs. Swiss-Prot
Match: BH143_ARATH (Transcription factor bHLH143 OS=Arabidopsis thaliana GN=BHLH143 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 3.0e-27 Identity = 112/344 (32.56%), Postives = 177/344 (51.45%), Query Frame = 1
BLAST of CmaCh16G002700 vs. Swiss-Prot
Match: BH145_ARATH (Transcription factor bHLH145 OS=Arabidopsis thaliana GN=BHLH145 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.7e-17 Identity = 77/241 (31.95%), Postives = 115/241 (47.72%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TrEMBL
Match: B7SHL0_CUCSA (Putative transcription factor OS=Cucumis sativus GN=Csa_4G113170 PE=2 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 2.0e-158 Identity = 281/349 (80.52%), Postives = 302/349 (86.53%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TrEMBL
Match: W9R7U4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011398 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73 Identity = 195/442 (44.12%), Postives = 250/442 (56.56%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TrEMBL
Match: A0A061E122_THECC (Sequence-specific DNA binding transcription factors,transcription regulators, putative OS=Theobroma cacao GN=TCM_007402 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 2.0e-70 Identity = 187/457 (40.92%), Postives = 255/457 (55.80%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TrEMBL
Match: A0A0B0MJS2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26115 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63 Identity = 180/460 (39.13%), Postives = 246/460 (53.48%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TrEMBL
Match: B9S9F0_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0884580 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 9.0e-63 Identity = 178/435 (40.92%), Postives = 234/435 (53.79%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TAIR10
Match: AT5G64340.1 (AT5G64340.1 sequence-specific DNA binding transcription factors;transcription regulators) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-28 Identity = 106/302 (35.10%), Postives = 144/302 (47.68%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TAIR10
Match: AT5G09460.1 (AT5G09460.1 sequence-specific DNA binding transcription factors;transcription regulators) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28 Identity = 112/344 (32.56%), Postives = 177/344 (51.45%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TAIR10
Match: AT5G50010.1 (AT5G50010.1 sequence-specific DNA binding transcription factors;transcription regulators) HSP 1 Score: 92.0 bits (227), Expect = 9.3e-19 Identity = 77/241 (31.95%), Postives = 115/241 (47.72%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TAIR10
Match: AT5G50011.1 (AT5G50011.1 conserved peptide upstream open reading frame 37) HSP 1 Score: 86.7 bits (213), Expect = 3.9e-17 Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 1
BLAST of CmaCh16G002700 vs. TAIR10
Match: AT5G09461.1 (AT5G09461.1 conserved peptide upstream open reading frame 43) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-14 Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1
BLAST of CmaCh16G002700 vs. NCBI nr
Match: gi|525507252|ref|NP_001267664.1| (transcription factor bHLH143-like [Cucumis sativus]) HSP 1 Score: 567.0 bits (1460), Expect = 2.8e-158 Identity = 281/349 (80.52%), Postives = 302/349 (86.53%), Query Frame = 1
BLAST of CmaCh16G002700 vs. NCBI nr
Match: gi|659125851|ref|XP_008462888.1| (PREDICTED: transcription factor bHLH143-like [Cucumis melo]) HSP 1 Score: 557.4 bits (1435), Expect = 2.2e-155 Identity = 283/360 (78.61%), Postives = 304/360 (84.44%), Query Frame = 1
BLAST of CmaCh16G002700 vs. NCBI nr
Match: gi|703093100|ref|XP_010094825.1| (hypothetical protein L484_011398 [Morus notabilis]) HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73 Identity = 195/442 (44.12%), Postives = 250/442 (56.56%), Query Frame = 1
BLAST of CmaCh16G002700 vs. NCBI nr
Match: gi|743827484|ref|XP_011023035.1| (PREDICTED: transcription factor bHLH143-like isoform X2 [Populus euphratica]) HSP 1 Score: 277.7 bits (709), Expect = 3.4e-71 Identity = 183/440 (41.59%), Postives = 248/440 (56.36%), Query Frame = 1
BLAST of CmaCh16G002700 vs. NCBI nr
Match: gi|590688176|ref|XP_007042873.1| (Sequence-specific DNA binding transcription factors,transcription regulators, putative [Theobroma cacao]) HSP 1 Score: 274.6 bits (701), Expect = 2.9e-70 Identity = 187/457 (40.92%), Postives = 255/457 (55.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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