MELO3C024616 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C024616
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDedicator of cytokinesis protein 3
Locationchr8 : 7505755 .. 7506303 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATCCAAGCTTAATTGTGAGAGGAATTATATAGATATCCAATATATATAAAATATATCGTCAAATTAGTTTATAATTTGAAAGATGACTCTTGGATTGGGGATTATTGGTGGCCTTCAGATTGAAGCTTCAGTGCAGAAAGTAATTGTTGACGTAATTATTCCGCTTGTGCTTAATCATATCCGGCTTGTACTTAGAATTGATGCCGAAATTGAAGGTGTTGTGGATGTTGTGTGTGAGGGTGGGCTAGGTGGCAAAATATATATCCTTAAGTTGAAGATAAAGGTCAGAATTGGTGGTGTTTATGTTAGTAAGTTGGCTGTGGTTAAAGTCAATTTTCCACCCTTCGGCGTTCCATACCTTGTCTCTTTCGAGTATGTTGAAGAAATCAACATCTAAAAACCAAGAAATCATGCTATGTATAATGAAGATGGTGCTTTCTTATGTATCATTTTCATCTCTTATATATATCCATCAATAAATATGTAAAACCTCTCTTCAAGAATGCAGTAGGGGATATTTCAGTTTATACTATATTTTTACTTTTT

mRNA sequence

ATCATCCAAGCTTAATTGTGAGAGGAATTATATAGATATCCAATATATATAAAATATATCGTCAAATTAGTTTATAATTTGAAAGATGACTCTTGGATTGGGGATTATTGGTGGCCTTCAGATTGAAGCTTCAGTGCAGAAAGTAATTGTTGACGTAATTATTCCGCTTGTGCTTAATCATATCCGGCTTGTACTTAGAATTGATGCCGAAATTGAAGGTGTTGTGGATGTTGTGTGTGAGGGTGGGCTAGGTGGCAAAATATATATCCTTAAGTTGAAGATAAAGGTCAGAATTGGTGGTGTTTATGTTAGTAAGTTGGCTGTGGTTAAAGTCAATTTTCCACCCTTCGGCGTTCCATACCTTGTCTCTTTCGAGTATGTTGAAGAAATCAACATCTAAAAACCAAGAAATCATGCTATGTATAATGAAGATGGTGCTTTCTTATGTATCATTTTCATCTCTTATATATATCCATCAATAAATATGTAAAACCTCTCTTCAAGAATGCAGTAGGGGATATTTCAGTTTATACTATATTTTTACTTTTT

Coding sequence (CDS)

ATGACTCTTGGATTGGGGATTATTGGTGGCCTTCAGATTGAAGCTTCAGTGCAGAAAGTAATTGTTGACGTAATTATTCCGCTTGTGCTTAATCATATCCGGCTTGTACTTAGAATTGATGCCGAAATTGAAGGTGTTGTGGATGTTGTGTGTGAGGGTGGGCTAGGTGGCAAAATATATATCCTTAAGTTGAAGATAAAGGTCAGAATTGGTGGTGTTTATGTTAGTAAGTTGGCTGTGGTTAAAGTCAATTTTCCACCCTTCGGCGTTCCATACCTTGTCTCTTTCGAGTATGTTGAAGAAATCAACATCTAA

Protein sequence

MTLGLGIIGGLQIEASVQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGKIYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVEEINI*
Homology
[Close]
BLAST of MELO3C024616 vs. TrEMBL
Match: A0A0A0KFK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483240 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 8.8e-20
Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 1 

Query: 1   MTLGLGIIGGLQIEAS--VQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGK 60
           MTLG+GI GGLQI         + D+++  V+ H + VL+IDA  EG++D   E GL GK
Sbjct: 1   MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGLNGK 60

Query: 61  IYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVEEINI 105
            Y LKLKIKVRIG  YV K+ +VK+ FP  G P +VSFEY+EEINI
Sbjct: 61  TYTLKLKIKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEINI 106

[Close]
BLAST of MELO3C024616 vs. TrEMBL
Match: A0A0A0KKQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483230 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-19
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1 

Query: 1   MTLGLGIIGGLQIEAS--VQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGK 60
           MTLG+GI GGLQI         + D+++  V+ H + VL+IDA  EG +D   E GL GK
Sbjct: 1   MTLGIGIGGGLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGK 60

Query: 61  IYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVEEINI 105
            YILKLK+KVRIG  YV K+ +VK+ FP  G P +VSFEY+EEI+I
Sbjct: 61  TYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI 106

[Close]
BLAST of MELO3C024616 vs. TrEMBL
Match: A0A0A0KFL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483250 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 1 

Query: 1   MTLGLGIIGGLQIEAS--VQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGK 60
           M++G+GI G LQI         + D+++  V+ H + VL+IDA  EG +D   E G+ GK
Sbjct: 1   MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGK 60

Query: 61  IYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVE 101
            Y  KLK+K+++G  YV K  +VK+ FP  G+P +VSFEY+E
Sbjct: 61  TYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE 102

[Close]
BLAST of MELO3C024616 vs. NCBI nr
Match: gi|700193134|gb|KGN48338.1| (hypothetical protein Csa_6G483240 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-19
Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 1 

Query: 1   MTLGLGIIGGLQIEAS--VQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGK 60
           MTLG+GI GGLQI         + D+++  V+ H + VL+IDA  EG++D   E GL GK
Sbjct: 1   MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGLNGK 60

Query: 61  IYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVEEINI 105
            Y LKLKIKVRIG  YV K+ +VK+ FP  G P +VSFEY+EEINI
Sbjct: 61  TYTLKLKIKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEINI 106

[Close]
BLAST of MELO3C024616 vs. NCBI nr
Match: gi|700193132|gb|KGN48336.1| (hypothetical protein Csa_6G483230 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 6.2e-19
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 1 

Query: 1   MTLGLGIIGGLQIEAS--VQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGK 60
           MTLG+GI GGLQI         + D+++  V+ H + VL+IDA  EG +D   E GL GK
Sbjct: 1   MTLGIGIGGGLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGK 60

Query: 61  IYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVEEINI 105
            YILKLK+KVRIG  YV K+ +VK+ FP  G P +VSFEY+EEI+I
Sbjct: 61  TYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI 106

[Close]
BLAST of MELO3C024616 vs. NCBI nr
Match: gi|700193139|gb|KGN48343.1| (hypothetical protein Csa_6G483250 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-14
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 1 

Query: 1   MTLGLGIIGGLQIEAS--VQKVIVDVIIPLVLNHIRLVLRIDAEIEGVVDVVCEGGLGGK 60
           M++G+GI G LQI         + D+++  V+ H + VL+IDA  EG +D   E G+ GK
Sbjct: 1   MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGK 60

Query: 61  IYILKLKIKVRIGGVYVSKLAVVKVNFPPFGVPYLVSFEYVE 101
            Y  KLK+K+++G  YV K  +VK+ FP  G+P +VSFEY+E
Sbjct: 61  TYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE 102

The following BLAST results are available for this feature:
BLAST of MELO3C024616 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFK8_CUCSA8.8e-2053.77Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483240 PE=4 SV=1[more]
A0A0A0KKQ8_CUCSA4.3e-1952.83Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483230 PE=4 SV=1[more]
A0A0A0KFL5_CUCSA3.2e-1443.14Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483250 PE=4 SV=1[more]
BLAST of MELO3C024616 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193134|gb|KGN48338.1|1.3e-1953.77hypothetical protein Csa_6G483240 [Cucumis sativus][more]
gi|700193132|gb|KGN48336.1|6.2e-1952.83hypothetical protein Csa_6G483230 [Cucumis sativus][more]
gi|700193139|gb|KGN48343.1|4.6e-1443.14hypothetical protein Csa_6G483250 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54522melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024616T1MELO3C024616T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54522MU54522transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C024616Csa6G483230Cucumber (Chinese Long) v2cumeB508
MELO3C024616CSPI06G26210Wild cucumber (PI 183967)cpimeB513
MELO3C024616Cucsa.100760Cucumber (Gy14) v1cgymeB132
MELO3C024616CsGy6G025790Cucumber (Gy14) v2cgybmeB446
MELO3C024616CsaV3_6G041470Cucumber (Chinese Long) v3cucmeB521
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024616Cucurbita pepo (Zucchini)cpemeB069
MELO3C024616Cucurbita pepo (Zucchini)cpemeB458
MELO3C024616Bottle gourd (USVL1VR-Ls)lsimeB150
MELO3C024616Silver-seed gourdcarmeB0242
MELO3C024616Watermelon (97103) v2mewmbB516
MELO3C024616Wax gourdmewgoB654
MELO3C024616Cucurbita maxima (Rimu)cmameB609
MELO3C024616Cucurbita maxima (Rimu)cmameB799
MELO3C024616Cucurbita moschata (Rifu)cmomeB598
MELO3C024616Cucurbita moschata (Rifu)cmomeB783
MELO3C024616Cucumber (Chinese Long) v2cumeB504
MELO3C024616Watermelon (Charleston Gray)mewcgB516
MELO3C024616Watermelon (97103) v1mewmB571