MELO3C024019.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C024019.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Locationchr04 : 23587975 .. 23588619 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTAATTTCCAAAGTGATTCCATCTCCCGCTACACTGTCCGTCGCTGTGACGACAGCAACGATCAATCTCTCCTAATCCAACTGGGAATTGTGCACCAACAGCTCTCCAGACCGCCTTACCACGGACCTACGAACCATAATATCCTCCATGAATCTAACACCGTTCCATTGCGGATTACCGTGTTCCCTCTCCCTTTGCAAGAACTCCAAGATCCCTCGATCTGCCATCTTTATACCCAGCGATTGCTCGCTTACGTGGACCTCGACATCGAAACCTGCGATATAGTCGCTAAGGATATCACCTCTCTCATCGGTGAAGTCTTGGCAGCCGGAAACTTGGAGGTTAAGTTCCGCATCGTGGCATTAATCGATCGGGTCCAAATGATCTGGAGGGAGGAGACGGGTAAAAGTAGGGGCGGTTCCCGAAGGGCGGCGATTGAGAGGTTGATGATGATGGAGAAGTTTGATGGGTTTGAAGAAGGAAGAGAGCTGGGAGATTGTTGTGTTTGTTATGAAGAACTGAAGGGAGAAGAGAAGGAGGTGAGTAGAATCGGGTGCGGTCATGTGTATCATAAGTCATGTATAATCAATTGGGTTCTAAGGAATGATTCTTGTCCTCTCTGCAGAAGTAAAATTTAA

mRNA sequence

ATGTCTTCTAATTTCCAAAGTGATTCCATCTCCCGCTACACTGTCCGTCGCTGTGACGACAGCAACGATCAATCTCTCCTAATCCAACTGGGAATTGTGCACCAACAGCTCTCCAGACCGCCTTACCACGGACCTACGAACCATAATATCCTCCATGAATCTAACACCGTTCCATTGCGGATTACCGTGTTCCCTCTCCCTTTGCAAGAACTCCAAGATCCCTCGATCTGCCATCTTTATACCCAGCGATTGCTCGCTTACGTGGACCTCGACATCGAAACCTGCGATATAGTCGCTAAGGATATCACCTCTCTCATCGGTGAAGTCTTGGCAGCCGGAAACTTGGAGGTTAAGTTCCGCATCGTGGCATTAATCGATCGGGTCCAAATGATCTGGAGGGAGGAGACGGGTAAAAGTAGGGGCGGTTCCCGAAGGGCGGCGATTGAGAGGTTGATGATGATGGAGAAGTTTGATGGGTTTGAAGAAGGAAGAGAGCTGGGAGATTGTTGTGTTTGTTATGAAGAACTGAAGGGAGAAGAGAAGGAGGTGAGTAGAATCGGGTGCGGTCATGTGTATCATAAGTCATGTATAATCAATTGGGTTCTAAGGAATGATTCTTGTCCTCTCTGCAGAAGTAAAATTTAA

Coding sequence (CDS)

ATGTCTTCTAATTTCCAAAGTGATTCCATCTCCCGCTACACTGTCCGTCGCTGTGACGACAGCAACGATCAATCTCTCCTAATCCAACTGGGAATTGTGCACCAACAGCTCTCCAGACCGCCTTACCACGGACCTACGAACCATAATATCCTCCATGAATCTAACACCGTTCCATTGCGGATTACCGTGTTCCCTCTCCCTTTGCAAGAACTCCAAGATCCCTCGATCTGCCATCTTTATACCCAGCGATTGCTCGCTTACGTGGACCTCGACATCGAAACCTGCGATATAGTCGCTAAGGATATCACCTCTCTCATCGGTGAAGTCTTGGCAGCCGGAAACTTGGAGGTTAAGTTCCGCATCGTGGCATTAATCGATCGGGTCCAAATGATCTGGAGGGAGGAGACGGGTAAAAGTAGGGGCGGTTCCCGAAGGGCGGCGATTGAGAGGTTGATGATGATGGAGAAGTTTGATGGGTTTGAAGAAGGAAGAGAGCTGGGAGATTGTTGTGTTTGTTATGAAGAACTGAAGGGAGAAGAGAAGGAGGTGAGTAGAATCGGGTGCGGTCATGTGTATCATAAGTCATGTATAATCAATTGGGTTCTAAGGAATGATTCTTGTCCTCTCTGCAGAAGTAAAATTTAA

Protein sequence

MSSNFQSDSISRYTVRRCDDSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVFPLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVALIDRVQMIWREETGKSRGGSRRAAIERLMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI
Homology
[Close]
BLAST of MELO3C024019.2 vs. NCBI nr
Match: XP_022947853.1 (E3 ubiquitin-protein ligase MBR2-like [Cucurbita moschata])

HSP 1 Score: 163.3 bits (412), Expect = 9.0e-37
Identity = 92/220 (41.82%), Postives = 139/220 (63.18%), Query Frame = 0 

Query: 5   FQSDSISRYTVRRCDDSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVF 64
           F + S  RY++RR  D  DQ L ++LG   + +SR PY G   ++IL E+ +  +  T+F
Sbjct: 3   FANSSTLRYSLRR-KDGTDQLLQVRLGYSSRLISRSPYSG-LPYDILEETPSTLIADTLF 62

Query: 65  PLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVAL 124
           PLPL+EL+DP  CH Y   L++ ++LD  +C+ +A+ ITSL+ +  AA + ++KF++VA 
Sbjct: 63  PLPLRELEDPLFCHAYLVELVSSLNLDSISCNPIAQKITSLVTQ-WAAVDYDLKFQLVAD 122

Query: 125 IDRVQMIWREETGKSRGGSRRAA-IERLMMMEKFDGFEE---------GRELGDCCVCYE 184
           ID +QM WREE   SRG  RR   +E  +++E+               G E   C  CY+
Sbjct: 123 IDYIQMFWREE---SRGPVRRGVMVEEKVVLEEAGVAATSAAGKQGMGGEECSVCYECYD 182

Query: 185 ELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           E KG +KEV++I CGH++HKSCI+ W L ++SCPLCR+K+
Sbjct: 183 EEKGGDKEVAKIPCGHMFHKSCILTWFLCSNSCPLCRAKL 216

[Close]
BLAST of MELO3C024019.2 vs. NCBI nr
Match: XP_023534304.1 (uncharacterized protein LOC111795903 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 7.7e-36
Identity = 90/225 (40.00%), Postives = 137/225 (60.89%), Query Frame = 0 

Query: 5   FQSDSISRYTVRRCDDSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVF 64
           F + S  RY++RR  D  DQ L ++LG   + +SR PY G  +++IL E+ +  +   +F
Sbjct: 3   FANSSTLRYSLRR-KDGTDQLLQVRLGYSSRLISRSPYSG-LSYDILEETPSTLIADALF 62

Query: 65  PLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVAL 124
           PLPL+EL+DP  CH Y   L++ ++LD  +C+ +A+ ITSL+ +  AA + + KF++VA 
Sbjct: 63  PLPLRELEDPLFCHAYLVELVSSLNLDSISCNPIAQKITSLVTQ-WAAVDYDAKFQLVAD 122

Query: 125 IDRVQMIWREETGKSRGGSRRAAIERLMMMEKFDGFEE---------------GRELGDC 184
           ID +QM WREE+        R+ + R +M+E+    EE               G E   C
Sbjct: 123 IDYIQMFWREES--------RSPVRRGVMVEERVVLEEAGVAATTAAGKQGMAGEECSVC 182

Query: 185 CVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
             CY+E KG +KEV+RI CGH++HKSCI+ W   ++SCPLCR+K+
Sbjct: 183 YECYDEEKGGDKEVARIPCGHMFHKSCILTWFQCSNSCPLCRAKL 216

[Close]
BLAST of MELO3C024019.2 vs. NCBI nr
Match: XP_023539480.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 1.9e-34
Identity = 91/229 (39.74%), Postives = 129/229 (56.33%), Query Frame = 0 

Query: 9   SISRYTVRRCD----DSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVF 68
           S++     RC+    D  DQ L I++G   + L+  P+ G    NI+HE+    +    F
Sbjct: 2   SLADLATFRCNLHRYDGPDQLLQIRIGHSSRLLTGSPFSG-YPFNIVHETLPTTMADAQF 61

Query: 69  PLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVAL 128
           PLPL+EL+DP  C  Y +  L+  +L     + +A+ I S + + +A GN E+ F IVA 
Sbjct: 62  PLPLRELEDPLFCQAYIKEFLSSYNLGATIKNAIARRIASFVVQ-MACGNYEMTFYIVAE 121

Query: 129 IDRVQMIWRE-------------------ETGKSRGGSRRAAIERLMMMEKFDGFEEGRE 188
           ID +QM W +                   +    R G+   AIERL   EKFDGF  G +
Sbjct: 122 IDYIQMFWMDXXXXXXXXXXXXXXXXXIFDDFSGRRGAPETAIERL-KKEKFDGF-GGED 181

Query: 189 LGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           LG+C VCY+E+K   +EVSRI CGHVYHKSC++ W+ RN+SCPLCR+K+
Sbjct: 182 LGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRNKL 226

[Close]
BLAST of MELO3C024019.2 vs. NCBI nr
Match: XP_023539471.1 (uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32
Identity = 90/234 (38.46%), Postives = 126/234 (53.85%), Query Frame = 0 

Query: 12  RYTVRRCDDSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVFPLPLQEL 71
           R  + R DD  DQ L I++    + L+  P+ G    NI+HE+    +    FPLPL+EL
Sbjct: 10  RCNLHRYDDP-DQLLQIRIRHSTRLLTGSPFSG-YPFNIVHETLPTTMADAQFPLPLREL 69

Query: 72  QDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVALIDRVQMI 131
           +DP  C  Y +  L+  +L     + +A+ I S + + +A GN E+ F IVA ID +QM 
Sbjct: 70  EDPLFCQAYIEEFLSSYNLGATIKNAIARRIASFVVQ-MACGNYEMTFYIVAEIDYIQMF 129

Query: 132 WREETG-------------------------------KSRGGSRRAAIERLMMMEKFDGF 191
           W +++                                  R G+   AIERL   EKFDGF
Sbjct: 130 WLDQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNFSGRRGAPETAIERL-KKEKFDGF 189

Query: 192 EEGRELGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
             G +LG+C VCY+E+K   +EVSRI CGHVYHKSC++ W+ RN+SCPLCR K+
Sbjct: 190 -GGEDLGNCSVCYDEMKDGGEEVSRIPCGHVYHKSCVLTWLQRNNSCPLCRKKL 238

[Close]
BLAST of MELO3C024019.2 vs. NCBI nr
Match: XP_022947841.1 (NEP1-interacting protein-like 1 [Cucurbita moschata])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 87/217 (40.09%), Postives = 131/217 (60.37%), Query Frame = 0 

Query: 5   FQSDSISRYTVRRCDDSNDQSLLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVF 64
           F + S  RY++RR +   DQ L ++LG   + +SR P  G   ++IL E+ + P+   +F
Sbjct: 3   FANASTLRYSLRR-NHGADQLLQLRLGYSSRLISRSPSAG-LPYDILEETPSTPMADALF 62

Query: 65  PLPLQELQDPSICHLYTQRLLAYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVAL 124
           PLPL+EL+DP  CH Y   L++  +L   T + + + ITS + +  AA + + KF++VA 
Sbjct: 63  PLPLRELEDPLFCHAYLVELVSSFNLGSVTWNPIVQKITSFVTQ-WAAVDYDAKFQLVAD 122

Query: 125 IDRVQMIWREETGKSRGGSRRAAI--ERLMMMEKFDGFEEGRELG--DCCVCYEEL---K 184
           ID +QM W E   K RG   R  +  ER+++ E      E + +G  +C VCYE     K
Sbjct: 123 IDYIQMFWME---KHRGSVGRGVMVEERVVLEETGVAAAEKQGIGGEECSVCYESYEAEK 182

Query: 185 GEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           G EKEV++I CGH +HKSCI+ W  R++SCPLCR+K+
Sbjct: 183 GGEKEVAKIPCGHAFHKSCILTWFQRSNSCPLCRAKL 213

[Close]
BLAST of MELO3C024019.2 vs. TAIR10
Match: AT5G67120.1 (RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.7e-11
Identity = 29/81 (35.80%), Postives = 47/81 (58.02%), Query Frame = 0 

Query: 134 EETGKSRGGSRRAAIERLMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYH 193
           +ETG  R G     I+  ++  K++   +  E   C +C ++LK  E EVS++GCGH +H
Sbjct: 193 DETGDERTGLSEEVIDENLIRRKYEKRSDD-ETKRCVICQQKLKDNE-EVSKLGCGHDFH 252

Query: 194 KSCIINWVLRNDSCPLCRSKI 215
             CI NW++  + CPLC  ++
Sbjct: 253 FGCIKNWLMVTNKCPLCNREV 271

[Close]
BLAST of MELO3C024019.2 vs. TAIR10
Match: AT1G45180.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 6.7e-10
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0 

Query: 134 EETGKSRGGSRRAAIERLMMMEKF-DGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVY 193
           E  G    G     I   +  +K+       +E+  CCVC EE K EE+E+ R+ CGH +
Sbjct: 556 ERIGDVCTGLNEETISNRLKQQKYKSSTRSSQEVEPCCVCQEEYK-EEEEIGRLECGHDF 615

Query: 194 HKSCIINWVLRNDSCPLCRS 213
           H  CI  W+ + + CP+C++
Sbjct: 616 HSQCIKEWLKQKNLCPICKT 634

[Close]
BLAST of MELO3C024019.2 vs. TAIR10
Match: AT3G30460.1 (RING/U-box superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0 

Query: 164 RELGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           R L  C +C EEL   E+ +S + C H YHK CI NW+   ++CPLCR  +
Sbjct: 92  RGLVVCAICREELAANER-LSELPCRHYYHKECISNWLSNRNTCPLCRHNV 141

[Close]
BLAST of MELO3C024019.2 vs. TAIR10
Match: AT2G37150.3 (RING/U-box superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-08
Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0 

Query: 134 EETGKSRGGSRRAAIERLMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYH 193
           E  G    G   +AI   ++   +    +  E   C +C EE K +E+     GCGH YH
Sbjct: 510 ERIGSVNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYH 569

Query: 194 KSCIINWVLRNDSCPLCRS 213
             CI  W+   +SCP+C+S
Sbjct: 570 GRCIKKWLSMKNSCPICKS 588

[Close]
BLAST of MELO3C024019.2 vs. TAIR10
Match: AT4G05350.1 (RING/U-box superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-08
Identity = 25/74 (33.78%), Postives = 42/74 (56.76%), Query Frame = 0 

Query: 143 SRRAAIERLMMMEKFDGFEEGRELGDCCVCYEELKG--EEKEVSRIGCGHVYHKSCIINW 202
           S R  +   M  E+F   +   E   C +C E L    + ++V+R+ C HV+H  C++ W
Sbjct: 133 SLRMVLLGRMKAEEFKSLK--METEPCSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEW 192

Query: 203 VLRNDSCPLCRSKI 215
           + R ++CPLCR++I
Sbjct: 193 LKRKNTCPLCRTEI 204

[Close]
BLAST of MELO3C024019.2 vs. Swiss-Prot
Match: sp|O49500|MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.7e-07
Identity = 24/81 (29.63%), Postives = 41/81 (50.62%), Query Frame = 0 

Query: 134 EETGKSRGGSRRAAIERLMMMEKFDGFEEG--RELGDCCVCYEELKGEEKEVSRIGCGHV 193
           E  G    G     I ++M   K      G  +++  CCVC EE   E  ++  +GCGH 
Sbjct: 582 ERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY-AEGDDLGTLGCGHE 641

Query: 194 YHKSCIINWVLRNDSCPLCRS 213
           +H +C+  W++  + CP+C++
Sbjct: 642 FHTACVKQWLMLKNLCPICKT 661

[Close]
BLAST of MELO3C024019.2 vs. Swiss-Prot
Match: sp|Q9ZV51|ATL56_ARATH (RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06
Identity = 17/47 (36.17%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 168 DCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           DC VC++  +  +   +  GCGHV+H+ C+  W+L+  +CP+CR+++
Sbjct: 109 DCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRARV 155

[Close]
BLAST of MELO3C024019.2 vs. Swiss-Prot
Match: sp|Q9Y7K6|YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-06
Identity = 22/65 (33.85%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 155 EKFDGFE--EGRELGD--CCVCYEEL-KGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPL 214
           E +D FE     +L D  C +CY+++ + +EK+ +++ CGH++ K+C+  W+  + +CPL
Sbjct: 89  EAWDSFEPLSNDQLMDLTCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCPL 148

[Close]
BLAST of MELO3C024019.2 vs. Swiss-Prot
Match: sp|Q9FHG8|ATL50_ARATH (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 0 

Query: 165 ELGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           +L DC VC  E   E++      C H +H  CI  W+L N +CPLCR  +
Sbjct: 118 DLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNL 167

[Close]
BLAST of MELO3C024019.2 vs. Swiss-Prot
Match: sp|Q9ZT50|RHA2A_ARATH (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-06
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0 

Query: 147 AIERLMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYHKSCIINWVLR-ND 206
           ++ RL      DG   G    DC VC  +LK E +EV ++ C HV+HK C+  W+ + N 
Sbjct: 67  SLNRLFSYRCGDGGGGG---SDCVVCLSKLK-EGEEVRKLECRHVFHKKCLEGWLHQFNF 126

Query: 207 SCPLCRSKI 215
           +CPLCRS +
Sbjct: 127 TCPLCRSAL 131

[Close]
BLAST of MELO3C024019.2 vs. TrEMBL
Match: tr|A0A0A0LRB0|A0A0A0LRB0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 75/178 (42.13%), Postives = 107/178 (60.11%), Query Frame = 0 

Query: 47  NHNILHESNTVPLRITVFPLPLQELQDPS-ICHLYTQRLLAYVDLDIETCDIVAKDITSL 106
           +H IL +++ + +  T+   PL+EL+DP  I H    R L+  ++    CD +   I+S 
Sbjct: 46  SHQILQQTSPILISDTLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSF 105

Query: 107 IGEVLAAGNLEVKFRIVALIDRVQMIW-----REETGKSRGGSRRAAIERLMMMEKFDGF 166
             + L AGNL   F I+A +D V   W      E+    R G+ R+AIERL M EK+DG 
Sbjct: 106 AFQ-LVAGNLNSNFHIIAALDFVYTHWVDLDPAEDAAAVRQGAPRSAIERL-MKEKYDG- 165

Query: 167 EEGRELGD-CCVCYEELKG---EEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
             G E+ D C VCYE+L G   +EKEVSRI CGH++HKSCI+ W+  ++SCPLCR ++
Sbjct: 166 NGGEEMEDECSVCYEDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGEL 220

[Close]
BLAST of MELO3C024019.2 vs. TrEMBL
Match: tr|A0A0A0L3Z2|A0A0A0L3Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.2e-23
Identity = 72/189 (38.10%), Postives = 106/189 (56.08%), Query Frame = 0 

Query: 43  HGPTNHNILHESNTVPLRITVFPLPLQELQDPS-ICHLYTQRLLAYVDLDIETCDIVAKD 102
           H P +  IL +++   +  T+ P  L EL+DP  I + +  R L+  D+    CD +  +
Sbjct: 43  HTP-SQQILQQTSPTLISDTLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYN 102

Query: 103 ITSLIGEVLAA--GNLEVKFRIVALIDRVQMIW-----REETGKSRGGSRRAAIERLMMM 162
           I+S  G++L A   N+ V F I+A +D V   W      E+    R G+  + IER +M 
Sbjct: 103 ISSFAGQILLAADSNINVNFHIIADVDIVYTHWVDLDPAEDAPAVRKGASTSVIER-VMK 162

Query: 163 EKFDGFEEGRELGD--CCVCYEELKGEE-------KEVSRIGCGHVYHKSCIINWVLRND 215
           EK+DG     + GD  C VCYE+L G+        KEVSRI CGH+YHKSCI+ W+  ++
Sbjct: 163 EKYDGNGGEEKEGDDQCSVCYEQLYGKRENEXXXXKEVSRIPCGHMYHKSCILKWLKISN 222

[Close]
BLAST of MELO3C024019.2 vs. TrEMBL
Match: tr|A0A1S3B605|A0A1S3B605_CUCME (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.2e-22
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0 

Query: 119 FRIVALIDRVQMI------WREETGKSRGGSRRAAIERLMMMEKFDGF--EEGRELGDCC 178
           F+I A ID V+ +      ++E       G+  +AIERL+M +KFDGF  EE  E+GDC 
Sbjct: 59  FKIEANIDHVEDLIIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNKEEEEEIGDCS 118

Query: 179 VCYEELKGEEKEVSRIGCGHVYHKSCIINWVLRNDSCPLCRSKI 215
           VCYEELKG+ KEVSRI CGHVYHKSC++ W+  N+SCPLCR+ +
Sbjct: 119 VCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPL 162

[Close]
BLAST of MELO3C024019.2 vs. TrEMBL
Match: tr|A0A0A0K696|A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 64/200 (32.00%), Postives = 105/200 (52.50%), Query Frame = 0 

Query: 26  LLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVFPLPLQELQDPSICHLYTQRLL 85
           L + +  + Q +S  P  G   H +LH++  +P    +F L L++LQ P     Y  ++L
Sbjct: 24  LQVNISFIQQIISVSPLTG-RPHEVLHQTPRIPYHNALFYLSLRQLQSPL---FYITQIL 83

Query: 86  AYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVALIDRVQMIWREETGKSRGGSRR 145
           + +++       +A+ I S I + +   N E  F I+A +D +++IW    G    G+  
Sbjct: 84  SSLNIRPAASQNMARRIASHILQ-MPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEE 143

Query: 146 A--------AIER---LMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYHK 205
                    A++R   +   E+    E+  ELGDC +C +EL  E++EV RI CGHVYH+
Sbjct: 144 TVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHE 203

Query: 206 SCIINWVLRNDSCPLCRSKI 215
           SCI  W+  ++SCPLCR  +
Sbjct: 204 SCIFKWLENHNSCPLCRKPL 218

[Close]
BLAST of MELO3C024019.2 vs. TrEMBL
Match: tr|A0A0A0K2W2|A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20
Identity = 64/200 (32.00%), Postives = 105/200 (52.50%), Query Frame = 0 

Query: 26  LLIQLGIVHQQLSRPPYHGPTNHNILHESNTVPLRITVFPLPLQELQDPSICHLYTQRLL 85
           L + +  + Q +S  P  G   H +LH++  +P    +F L L++LQ P     Y  ++L
Sbjct: 24  LQVNISFIQQIISVSPLTG-RPHEVLHQTPRIPYHNALFYLSLRQLQSPL---FYITQIL 83

Query: 86  AYVDLDIETCDIVAKDITSLIGEVLAAGNLEVKFRIVALIDRVQMIWREETGKSRGGSRR 145
           + +++       +A+ I S I + +   N E  F I+A +D +++IW    G    G+  
Sbjct: 84  SSLNIRPAASQNMARRIASHILQ-MPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEE 143

Query: 146 A--------AIER---LMMMEKFDGFEEGRELGDCCVCYEELKGEEKEVSRIGCGHVYHK 205
                    A++R   +   E+    E+  ELGDC +C +EL  E++EV RI CGHVYH+
Sbjct: 144 TVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHE 203

Query: 206 SCIINWVLRNDSCPLCRSKI 215
           SCI  W+  ++SCPLCR  +
Sbjct: 204 SCIFKWLENHNSCPLCRKPL 218

The following BLAST results are available for this feature:
BLAST of MELO3C024019.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022947853.19.0e-3741.82E3 ubiquitin-protein ligase MBR2-like [Cucurbita moschata][more]
XP_023534304.17.7e-3640.00uncharacterized protein LOC111795903 [Cucurbita pepo subsp. pepo][more]
XP_023539480.11.9e-3439.74E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo][more]
XP_023539471.11.0e-3238.46uncharacterized protein LOC111800118 [Cucurbita pepo subsp. pepo][more]
XP_022947841.11.5e-3140.09NEP1-interacting protein-like 1 [Cucurbita moschata][more]
BLAST of MELO3C024019.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G67120.14.7e-1135.80RING/U-box superfamily protein[more]
AT1G45180.16.7e-1033.75RING/U-box superfamily protein[more]
AT3G30460.12.2e-0845.10RING/U-box superfamily protein[more]
AT2G37150.32.8e-0832.91RING/U-box superfamily protein[more]
AT4G05350.12.8e-0833.78RING/U-box superfamily protein[more]
BLAST of MELO3C024019.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O49500|MBR2_ARATH8.7e-0729.63E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV... [more]
sp|Q9ZV51|ATL56_ARATH1.9e-0636.17RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1[more]
sp|Q9Y7K6|YGI4_SCHPO2.5e-0633.85Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai... [more]
sp|Q9FHG8|ATL50_ARATH3.3e-0640.00Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P... [more]
sp|Q9ZT50|RHA2A_ARATH3.3e-0640.58E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ... [more]
BLAST of MELO3C024019.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRB0|A0A0A0LRB0_CUCSA1.1e-2542.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1[more]
tr|A0A0A0L3Z2|A0A0A0L3Z2_CUCSA2.2e-2338.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1[more]
tr|A0A1S3B605|A0A1S3B605_CUCME4.2e-2253.85RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103486202 PE=4 SV=1[more]
tr|A0A0A0K696|A0A0A0K696_CUCSA1.0e-2032.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1[more]
tr|A0A0A0K2W2|A0A0A0K2W2_CUCSA1.0e-2032.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C024019.2.1MELO3C024019.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 169..210
e-value: 1.3E-6
score: 38.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 168..211
e-value: 7.7E-12
score: 45.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 169..211
score: 12.563
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 131..214
e-value: 4.3E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 35..212
NoneNo IPR availablePANTHERPTHR14155:SF430GH10160Pcoord: 35..212
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 168..214

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C024019.2Cucsa.192650Cucumber (Gy14) v1cgymedB342
MELO3C024019.2Lsi03G011720Bottle gourd (USVL1VR-Ls)lsimedB273
MELO3C024019.2Cla017306Watermelon (97103) v1medwmB344
MELO3C024019.2Cla97C10G194810Watermelon (97103) v2medwmbB305
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C024019.2Silver-seed gourdcarmedB0460
MELO3C024019.2Silver-seed gourdcarmedB0770
MELO3C024019.2Silver-seed gourdcarmedB0822
MELO3C024019.2Cucumber (Chinese Long) v3cucmedB198
MELO3C024019.2Cucumber (Chinese Long) v3cucmedB556
MELO3C024019.2Watermelon (97103) v2medwmbB357
MELO3C024019.2Wax gourdmedwgoB375
MELO3C024019.2Wax gourdmedwgoB443
MELO3C024019.2Cucumber (Gy14) v2cgybmedB173
MELO3C024019.2Cucumber (Gy14) v2cgybmedB485
MELO3C024019.2Cucumber (Gy14) v1cgymedB203
MELO3C024019.2Cucurbita maxima (Rimu)cmamedB257
MELO3C024019.2Cucurbita maxima (Rimu)cmamedB387
MELO3C024019.2Cucurbita maxima (Rimu)cmamedB489
MELO3C024019.2Cucurbita maxima (Rimu)cmamedB943
MELO3C024019.2Cucurbita moschata (Rifu)cmomedB239
MELO3C024019.2Cucurbita moschata (Rifu)cmomedB374
MELO3C024019.2Cucurbita moschata (Rifu)cmomedB476
MELO3C024019.2Cucurbita moschata (Rifu)cmomedB932
MELO3C024019.2Cucurbita pepo (Zucchini)cpemedB160
MELO3C024019.2Cucurbita pepo (Zucchini)cpemedB360
MELO3C024019.2Cucurbita pepo (Zucchini)cpemedB615
MELO3C024019.2Cucurbita pepo (Zucchini)cpemedB673
MELO3C024019.2Wild cucumber (PI 183967)cpimedB193
MELO3C024019.2Wild cucumber (PI 183967)cpimedB544
MELO3C024019.2Cucumber (Chinese Long) v2cumedB193
MELO3C024019.2Cucumber (Chinese Long) v2cumedB528
MELO3C024019.2Melon (DHL92) v3.6.1medmedB084
MELO3C024019.2Bottle gourd (USVL1VR-Ls)lsimedB221
MELO3C024019.2Watermelon (Charleston Gray)medwcgB308
MELO3C024019.2Watermelon (Charleston Gray)medwcgB309
MELO3C024019.2Watermelon (97103) v1medwmB343