MELO3C023070 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023070
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSmall acidic protein 1
Locationchr5 : 6956263 .. 6956929 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATGAGTCATTATAGAACTTGTTTTAATATTTAGGTTACTTTATCAAGGTTTCTTCTCAAATTCCCATTCGGCCAAGTTACAAATTCAAACAAGTCTATTTGGTTTCCATTGTTCATTTGGTTGCCACGGAGATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGAGATTCTTTTTCGTGGTTTCCTTCAAAACAAGTAGTTAATTTCCCAATTCTATGTTCTTACTTCTCTTGATCAAACAAAGTTGATAGATCCTACCATGCCCTAGTTTGTTTCAGTCTTTAGGGATTTCACTGGTTTGCTTGGTGATAAGTTGAATACTTTTAACATGTTTTACTTTCTGAATTACTTGATTGGTTATCCCATAGTTTCTTTTCTCTCAAGCGTGGTGGTTAGCCTTGTAATTGTCATTAGTTGCAACGAAAAAGGGGAATGTGTTTATATATAACAGAAAATGTGAGAAACTGTGTACTTTGTTGCCACATAATTTTAGAGTGATTTTGAAATAG

mRNA sequence

GAAATGAGTCATTATAGAACTTGTTTTAATATTTAGGTTACTTTATCAAGGTTTCTTCTCAAATTCCCATTCGGCCAAGTTACAAATTCAAACAAGTCTATTTGGTTTCCATTGTTCATTTGGTTGCCACGGAGATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGAGATTCTTTTTCGTGGTTTCCTTCAAAACAAGTAGTTAATTTCCCAATTCTATGTTCTTACTTCTCTTGATCAAACAAAGTTGATAGATCCTACCATGCCCTAGTTTGTTTCAGTCTTTAGGGATTTCACTGGTTTGCTTGGTGATAAGTTGAATACTTTTAACATGTTTTACTTTCTGAATTACTTGATTGGTTATCCCATAGTTTCTTTTCTCTCAAGCGTGGTGGTTAGCCTTGTAATTGTCATTAGTTGCAACGAAAAAGGGGAATGTGTTTATATATAACAGAAAATGTGAGAAACTGTGTACTTTGTTGCCACATAATTTTAGAGTGATTTTGAAATAG

Coding sequence (CDS)

ATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGA

Protein sequence

MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN*
Homology
[Close]
BLAST of MELO3C023070 vs. Swiss-Prot
Match: SMAP1_ARATH (Small acidic protein 1 OS=Arabidopsis thaliana GN=SMAP1 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.3e-15
Identity = 34/62 (54.84%), Postives = 49/62 (79.03%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D
Sbjct: 1  MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. Swiss-Prot
Match: SMAP2_ARATH (Small acidic protein 2 OS=Arabidopsis thaliana GN=SMAP2 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.7e-06
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 7  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSD 63
          +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD
Sbjct: 17 DFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFEDDFDDSD 76

[Close]
BLAST of MELO3C023070 vs. TrEMBL
Match: A0A0A0LNK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G166190 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.2e-26
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. TrEMBL
Match: F6HX06_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00130 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.9e-22
Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PME++AEL++QG+TVAMDVDDVDPLEI GEGVIS +NKLADADFFNSFEDDFDDSD
Sbjct: 1  MRPTPMEYYAELDDQGATVAMDVDDVDPLEIFGEGVISVDNKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. TrEMBL
Match: A0A059B201_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02882 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-20
Identity = 49/63 (77.78%), Postives = 59/63 (93.65%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEIL-GEGVISAENKLADADFFNSFEDDFDDS 60
          MR +PM++FAELE+QG+TVAMDVDDVDPLEI  GEGV+S +NKLADADFFN+FEDDFDD+
Sbjct: 30 MRPTPMDYFAELEDQGTTVAMDVDDVDPLEIFGGEGVLSVDNKLADADFFNAFEDDFDDA 89

Query: 61 DVN 63
          D+N
Sbjct: 90 DIN 92

[Close]
BLAST of MELO3C023070 vs. TrEMBL
Match: A9PHA8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 7.6e-19
Identity = 46/62 (74.19%), Postives = 55/62 (88.71%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   ++FFA++E+QGSTVAMDVDDVD LE+ GEGVI+ ENKLADADFFN FEDDFDD+D
Sbjct: 1  MRPMQVDFFADMEDQGSTVAMDVDDVDALEMFGEGVINMENKLADADFFNYFEDDFDDTD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. TrEMBL
Match: B9HSW7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07360g PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 7.6e-19
Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   ++ FA++EEQGSTVAMDVDDVD LE+ GEGVI+ ENKLADADFFN FEDDFDDSD
Sbjct: 1  MRPMQVDLFADMEEQGSTVAMDVDDVDTLEMFGEGVINMENKLADADFFNYFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. TAIR10
Match: AT4G13520.1 (AT4G13520.1 small acidic protein 1)

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-16
Identity = 34/62 (54.84%), Postives = 49/62 (79.03%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D
Sbjct: 1  MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. TAIR10
Match: AT3G24280.1 (AT3G24280.1 small acidic protein 2)

HSP 1 Score: 51.2 bits (121), Expect = 2.7e-07
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 1 

Query: 7  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSD 63
          +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD
Sbjct: 17 DFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFEDDFDDSD 76

[Close]
BLAST of MELO3C023070 vs. NCBI nr
Match: gi|659121545|ref|XP_008460713.1| (PREDICTED: small acidic protein 1 [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 2.4e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          VN
Sbjct: 61 VN 62

[Close]
BLAST of MELO3C023070 vs. NCBI nr
Match: gi|449458884|ref|XP_004147176.1| (PREDICTED: small acidic protein 1 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.2e-26
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. NCBI nr
Match: gi|225433324|ref|XP_002285566.1| (PREDICTED: small acidic protein 1 [Vitis vinifera])

HSP 1 Score: 112.5 bits (280), Expect = 2.8e-22
Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR +PME++AEL++QG+TVAMDVDDVDPLEI GEGVIS +NKLADADFFNSFEDDFDDSD
Sbjct: 22 MRPTPMEYYAELDDQGATVAMDVDDVDPLEIFGEGVISVDNKLADADFFNSFEDDFDDSD 81

Query: 61 VN 63
          +N
Sbjct: 82 IN 83

[Close]
BLAST of MELO3C023070 vs. NCBI nr
Match: gi|1000968095|ref|XP_015574032.1| (PREDICTED: small acidic protein 1 [Ricinus communis])

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-21
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MR   MEFFA+++EQGS+VAMDVDDVDPLEI GEGVIS +NKLADADFFN+FEDDFDDSD
Sbjct: 1  MRPMQMEFFADMDEQGSSVAMDVDDVDPLEIFGEGVISVDNKLADADFFNNFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 62

[Close]
BLAST of MELO3C023070 vs. NCBI nr
Match: gi|1009140562|ref|XP_015887720.1| (PREDICTED: small acidic protein 1 [Ziziphus jujuba])

HSP 1 Score: 108.6 bits (270), Expect = 4.0e-21
Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 1 

Query: 1  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60
          MRS+ MEFF ++EEQGST+AMDVDDVDPLE+LGEGV+S +NKLADADFFNSFEDDFDDSD
Sbjct: 1  MRSTAMEFFGDMEEQGSTMAMDVDDVDPLEVLGEGVVS-DNKLADADFFNSFEDDFDDSD 60

Query: 61 VN 63
          +N
Sbjct: 61 IN 61

The following BLAST results are available for this feature:
BLAST of MELO3C023070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SMAP1_ARATH3.3e-1554.84Small acidic protein 1 OS=Arabidopsis thaliana GN=SMAP1 PE=1 SV=1[more]
SMAP2_ARATH4.7e-0643.55Small acidic protein 2 OS=Arabidopsis thaliana GN=SMAP2 PE=2 SV=1[more]
BLAST of MELO3C023070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNK1_CUCSA2.2e-2698.39Uncharacterized protein OS=Cucumis sativus GN=Csa_2G166190 PE=4 SV=1[more]
F6HX06_VITVI1.9e-2282.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00130 PE=4 SV=... [more]
A0A059B201_EUCGR1.8e-2077.78Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02882 PE=4 SV=1[more]
A9PHA8_POPTR7.6e-1974.19Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
B9HSW7_POPTR7.6e-1975.81Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07360g PE=4 SV=1[more]
BLAST of MELO3C023070 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13520.11.8e-1654.84 small acidic protein 1[more]
AT3G24280.12.7e-0743.55 small acidic protein 2[more]
BLAST of MELO3C023070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121545|ref|XP_008460713.1|2.4e-26100.00PREDICTED: small acidic protein 1 [Cucumis melo][more]
gi|449458884|ref|XP_004147176.1|3.2e-2698.39PREDICTED: small acidic protein 1 [Cucumis sativus][more]
gi|225433324|ref|XP_002285566.1|2.8e-2282.26PREDICTED: small acidic protein 1 [Vitis vinifera][more]
gi|1000968095|ref|XP_015574032.1|4.0e-2180.65PREDICTED: small acidic protein 1 [Ricinus communis][more]
gi|1009140562|ref|XP_015887720.1|4.0e-2182.26PREDICTED: small acidic protein 1 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0009733 response to auxin
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU50415melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023070T1MELO3C023070T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50415MU50415transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C023070Csa2G166190Cucumber (Chinese Long) v2cumeB131
MELO3C023070Cla007637Watermelon (97103) v1mewmB430
MELO3C023070ClCG06G007470Watermelon (Charleston Gray)mewcgB388
MELO3C023070Cla97C06G117200Watermelon (97103) v2mewmbB388
MELO3C023070Bhi12G001362Wax gourdmewgoB446
MELO3C023070CSPI02G09760Wild cucumber (PI 183967)cpimeB141
MELO3C023070CmaCh08G010450Cucurbita maxima (Rimu)cmameB845
MELO3C023070CmoCh08G010160Cucurbita moschata (Rifu)cmomeB828
MELO3C023070Lsi09G011730Bottle gourd (USVL1VR-Ls)lsimeB025
MELO3C023070Cp4.1LG17g03130Cucurbita pepo (Zucchini)cpemeB310
MELO3C023070Carg11004Silver-seed gourdcarmeB1046
MELO3C023070CsaV3_2G012210Cucumber (Chinese Long) v3cucmeB143
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023070Watermelon (97103) v2mewmbB384
MELO3C023070Wax gourdmewgoB450
MELO3C023070Melon (DHL92) v3.5.1memeB147
MELO3C023070Cucumber (Gy14) v1cgymeB434
MELO3C023070Cucumber (Gy14) v1cgymeB624
MELO3C023070Cucurbita maxima (Rimu)cmameB234
MELO3C023070Cucurbita maxima (Rimu)cmameB338
MELO3C023070Cucurbita maxima (Rimu)cmameB760
MELO3C023070Cucurbita moschata (Rifu)cmomeB221
MELO3C023070Cucurbita moschata (Rifu)cmomeB331
MELO3C023070Cucurbita moschata (Rifu)cmomeB752
MELO3C023070Wild cucumber (PI 183967)cpimeB226
MELO3C023070Cucumber (Chinese Long) v2cumeB231
MELO3C023070Watermelon (Charleston Gray)mewcgB385
MELO3C023070Watermelon (97103) v1mewmB411
MELO3C023070Watermelon (97103) v1mewmB413
MELO3C023070Cucurbita pepo (Zucchini)cpemeB137
MELO3C023070Cucurbita pepo (Zucchini)cpemeB578
MELO3C023070Cucurbita pepo (Zucchini)cpemeB804
MELO3C023070Bottle gourd (USVL1VR-Ls)lsimeB360
MELO3C023070Cucumber (Gy14) v2cgybmeB122
MELO3C023070Cucumber (Gy14) v2cgybmeB195
MELO3C023070Silver-seed gourdcarmeB0233
MELO3C023070Silver-seed gourdcarmeB0238
MELO3C023070Silver-seed gourdcarmeB0939
MELO3C023070Cucumber (Chinese Long) v3cucmeB232