Cp4.1LG17g03130 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG17g03130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionsmall acidic protein 1
LocationCp4.1LG17 : 1532977 .. 1534075 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGTAATAAAAAGCTGGAAGGCTGGAAGCGTGATTGTGAGGGCTCGATATATCATCCCTTTGCTTCTCCAGTCGGCACAAAGACGAAGCAAGAAGAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGGTAAGAATCTTGATTGATTACAATTTCTTTGCCTCTCGATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTGGTTCAAAATTCTATTCCGGTGAGTTGCTCATCAAAGATGTCTATGTTCCATTTAAGAAAGCTTCTTTCATCTTGATTATTTTCCAGTCGTTCATGATATAGAATCCTAAAAGAGATCGAATGGCTGTTTCGCTTTTTATTTCGATTTTGTGAAGTTCCGAACAAACGTATCGGTTTTGTTATTGGTTGATTGCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCAGAGAACAAGCTCGCCGACTCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCCATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATGCCAAAAACTTGCTGCTTGCTAGTAAGGAATAAGGATAAGCTCATCCCTATCTGT

mRNA sequence

ATAGTAATAAAAAGCTGGAAGGCTGGAAGCGTGATTGTGAGGGCTCGATATATCATCCCTTTGCTTCTCCAGTCGGCACAAAGACGAAGCAAGAAGAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCAGAGAACAAGCTCGCCGACTCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCCATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATGCCAAAAACTTGCTGCTTGCTAGTAAGGAATAAGGATAAGCTCATCCCTATCTGT

Coding sequence (CDS)

ATAGTAATAAAAAGCTGGAAGGCTGGAAGCGTGATTGTGAGGGCTCGATATATCATCCCTTTGCTTCTCCAGTCGGCACAAAGACGAAGCAAGAAGAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCAGAGAACAAGCTCGCCGACTCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGA

Protein sequence

IVIKSWKAGSVIVRARYIIPLLLQSAQRRSKKNKSETELRNKSWARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSDIN
BLAST of Cp4.1LG17g03130 vs. Swiss-Prot
Match: SMAP1_ARATH (Small acidic protein 1 OS=Arabidopsis thaliana GN=SMAP1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MRP  ++  +EM++ GS++AMDVDD++ +EIL EG + ++NKLAD+DFFN F+DDFDD+D
Sbjct: 1   MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 120 IN 122
           IN
Sbjct: 61  IN 62

BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: A0A0A0LNK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G166190 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.5e-23
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSD
Sbjct: 1   MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 120 IN 122
           IN
Sbjct: 61  IN 62

BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: A0A059B201_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02882 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-21
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 50  VRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEIL-GEGVISAENKLADSDFF 109
           VR R  AR +MRPTPM++FAE+E+QG+TVAMDVDDVDPLEI  GEGV+S +NKLAD+DFF
Sbjct: 20  VRERERAREKMRPTPMDYFAELEDQGTTVAMDVDDVDPLEIFGGEGVLSVDNKLADADFF 79

Query: 110 NSFEDDFDDSDIN 122
           N+FEDDFDD+DIN
Sbjct: 80  NAFEDDFDDADIN 92

BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: F6HX06_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00130 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-21
Identity = 52/62 (83.87%), Postives = 60/62 (96.77%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MRPTPME++AE+++QG+TVAMDVDDVDPLEI GEGVIS +NKLAD+DFFNSFEDDFDDSD
Sbjct: 1   MRPTPMEYYAELDDQGATVAMDVDDVDPLEIFGEGVISVDNKLADADFFNSFEDDFDDSD 60

Query: 120 IN 122
           IN
Sbjct: 61  IN 62

BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: M5XN22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb015019mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18
Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 1

Query: 32  KNKSETELRNKSWARSV-IVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEI 91
           + K+ +   N++  RS+ I  AR    G MRPTPM+FF +M++QGST+AMDVDDVD LE 
Sbjct: 7   RQKASSPAENQNVRRSIAIASARERRFGAMRPTPMDFFGDMDDQGSTMAMDVDDVDTLES 66

Query: 92  LGEGVISAENKLADSDFFNSFEDDFDDSDIN 122
             +GVI  ENKLAD+DFFNSFEDDFDD+DIN
Sbjct: 67  FADGVI-GENKLADADFFNSFEDDFDDTDIN 96

BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: U5G8D5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s17410g PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.5e-18
Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 1

Query: 59  EMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDS 118
           EMRP  ++FFA+ME+QGSTVAMDVDDVD LE+ GEGVI+ ENKLAD+DFFN FEDDFDD+
Sbjct: 32  EMRPMQVDFFADMEDQGSTVAMDVDDVDALEMFGEGVINMENKLADADFFNYFEDDFDDT 91

Query: 119 DIN 122
           DIN
Sbjct: 92  DIN 94

BLAST of Cp4.1LG17g03130 vs. TAIR10
Match: AT4G13520.1 (AT4G13520.1 small acidic protein 1)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15
Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MRP  ++  +EM++ GS++AMDVDD++ +EIL EG + ++NKLAD+DFFN F+DDFDD+D
Sbjct: 1   MRPMQLDMLSEMDDAGSSMAMDVDDLEAMEILNEGGLVSDNKLADADFFNKFDDDFDDTD 60

Query: 120 IN 122
           IN
Sbjct: 61  IN 62

BLAST of Cp4.1LG17g03130 vs. TAIR10
Match: AT3G24280.1 (AT3G24280.1 small acidic protein 2)

HSP 1 Score: 48.1 bits (113), Expect = 4.3e-06
Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1

Query: 60  MRPTPM-EFFAEMEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADSDFFNSFE 119
           MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  DSDFFN FE
Sbjct: 10  MRPMVYRDFLGEMEYPGYSMPMQMEIDEDDFGPMDMQFEVGGISPFQMKPEDSDFFNKFE 69

Query: 120 DDFDDSDIN 122
           DDFDDSDIN
Sbjct: 70  DDFDDSDIN 78

BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|449458884|ref|XP_004147176.1| (PREDICTED: small acidic protein 1 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSD
Sbjct: 1   MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 120 IN 122
           IN
Sbjct: 61  IN 62

BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|659121545|ref|XP_008460713.1| (PREDICTED: small acidic protein 1 [Cucumis melo])

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSD
Sbjct: 1   MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD 60

Query: 120 IN 122
           +N
Sbjct: 61  VN 62

BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|225433324|ref|XP_002285566.1| (PREDICTED: small acidic protein 1 [Vitis vinifera])

HSP 1 Score: 111.7 bits (278), Expect = 9.1e-22
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 1

Query: 53  RSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFE 112
           R   + EMRPTPME++AE+++QG+TVAMDVDDVDPLEI GEGVIS +NKLAD+DFFNSFE
Sbjct: 15  REREKREMRPTPMEYYAELDDQGATVAMDVDDVDPLEIFGEGVISVDNKLADADFFNSFE 74

Query: 113 DDFDDSDIN 122
           DDFDDSDIN
Sbjct: 75  DDFDDSDIN 83

BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|702441693|ref|XP_010023791.1| (PREDICTED: small acidic protein 1 [Eucalyptus grandis])

HSP 1 Score: 109.8 bits (273), Expect = 3.4e-21
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 50  VRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEIL-GEGVISAENKLADSDFF 109
           VR R  AR +MRPTPM++FAE+E+QG+TVAMDVDDVDPLEI  GEGV+S +NKLAD+DFF
Sbjct: 20  VRERERAREKMRPTPMDYFAELEDQGTTVAMDVDDVDPLEIFGGEGVLSVDNKLADADFF 79

Query: 110 NSFEDDFDDSDIN 122
           N+FEDDFDD+DIN
Sbjct: 80  NAFEDDFDDADIN 92

BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|1000968095|ref|XP_015574032.1| (PREDICTED: small acidic protein 1 [Ricinus communis])

HSP 1 Score: 105.9 bits (263), Expect = 5.0e-20
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 1

Query: 60  MRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSD 119
           MRP  MEFFA+M+EQGS+VAMDVDDVDPLEI GEGVIS +NKLAD+DFFN+FEDDFDDSD
Sbjct: 1   MRPMQMEFFADMDEQGSSVAMDVDDVDPLEIFGEGVISVDNKLADADFFNNFEDDFDDSD 60

Query: 120 IN 122
           IN
Sbjct: 61  IN 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
SMAP1_ARATH4.1e-1458.06Small acidic protein 1 OS=Arabidopsis thaliana GN=SMAP1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LNK1_CUCSA7.5e-2393.55Uncharacterized protein OS=Cucumis sativus GN=Csa_2G166190 PE=4 SV=1[more]
A0A059B201_EUCGR2.4e-2175.34Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02882 PE=4 SV=1[more]
F6HX06_VITVI3.1e-2183.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00130 PE=4 SV=... [more]
M5XN22_PRUPE1.5e-1860.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb015019mg PE=4 SV=1[more]
U5G8D5_POPTR2.5e-1877.78Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s17410g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G13520.12.3e-1558.06 small acidic protein 1[more]
AT3G24280.14.3e-0647.83 small acidic protein 2[more]
Match NameE-valueIdentityDescription
gi|449458884|ref|XP_004147176.1|1.1e-2293.55PREDICTED: small acidic protein 1 [Cucumis sativus][more]
gi|659121545|ref|XP_008460713.1|1.4e-2291.94PREDICTED: small acidic protein 1 [Cucumis melo][more]
gi|225433324|ref|XP_002285566.1|9.1e-2278.26PREDICTED: small acidic protein 1 [Vitis vinifera][more]
gi|702441693|ref|XP_010023791.1|3.4e-2175.34PREDICTED: small acidic protein 1 [Eucalyptus grandis][more]
gi|1000968095|ref|XP_015574032.1|5.0e-2083.87PREDICTED: small acidic protein 1 [Ricinus communis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0009733 response to auxin
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g03130.1Cp4.1LG17g03130.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g03130Melon (DHL92) v3.6.1cpemedB361
Cp4.1LG17g03130Melon (DHL92) v3.6.1cpemedB371
Cp4.1LG17g03130Silver-seed gourdcarcpeB0323
Cp4.1LG17g03130Silver-seed gourdcarcpeB0333
Cp4.1LG17g03130Silver-seed gourdcarcpeB1096
Cp4.1LG17g03130Silver-seed gourdcarcpeB1330
Cp4.1LG17g03130Cucumber (Chinese Long) v3cpecucB0383
Cp4.1LG17g03130Cucumber (Chinese Long) v3cpecucB0385
Cp4.1LG17g03130Wax gourdcpewgoB0388
Cp4.1LG17g03130Wax gourdcpewgoB0404
Cp4.1LG17g03130Cucurbita pepo (Zucchini)cpecpeB169
Cp4.1LG17g03130Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG17g03130Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG17g03130Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG17g03130Cucumber (Gy14) v1cgycpeB0675
Cp4.1LG17g03130Cucumber (Gy14) v1cgycpeB1009
Cp4.1LG17g03130Cucurbita maxima (Rimu)cmacpeB266
Cp4.1LG17g03130Cucurbita maxima (Rimu)cmacpeB388
Cp4.1LG17g03130Cucurbita maxima (Rimu)cmacpeB631
Cp4.1LG17g03130Cucurbita maxima (Rimu)cmacpeB824
Cp4.1LG17g03130Cucurbita moschata (Rifu)cmocpeB230
Cp4.1LG17g03130Cucurbita moschata (Rifu)cmocpeB351
Cp4.1LG17g03130Cucurbita moschata (Rifu)cmocpeB580
Cp4.1LG17g03130Cucurbita moschata (Rifu)cmocpeB777
Cp4.1LG17g03130Wild cucumber (PI 183967)cpecpiB310
Cp4.1LG17g03130Wild cucumber (PI 183967)cpecpiB312
Cp4.1LG17g03130Cucumber (Chinese Long) v2cpecuB310
Cp4.1LG17g03130Bottle gourd (USVL1VR-Ls)cpelsiB267
Cp4.1LG17g03130Bottle gourd (USVL1VR-Ls)cpelsiB269
Cp4.1LG17g03130Watermelon (Charleston Gray)cpewcgB293
Cp4.1LG17g03130Watermelon (Charleston Gray)cpewcgB306
Cp4.1LG17g03130Watermelon (97103) v1cpewmB331
Cp4.1LG17g03130Watermelon (97103) v1cpewmB326
Cp4.1LG17g03130Melon (DHL92) v3.5.1cpemeB309
Cp4.1LG17g03130Melon (DHL92) v3.5.1cpemeB316
Cp4.1LG17g03130Cucumber (Gy14) v2cgybcpeB203
Cp4.1LG17g03130Cucumber (Gy14) v2cgybcpeB352
Cp4.1LG17g03130Cucumber (Gy14) v2cgybcpeB354