Cp4.1LG17g03130 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGTAATAAAAAGCTGGAAGGCTGGAAGCGTGATTGTGAGGGCTCGATATATCATCCCTTTGCTTCTCCAGTCGGCACAAAGACGAAGCAAGAAGAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGGTAAGAATCTTGATTGATTACAATTTCTTTGCCTCTCGATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTGGTTCAAAATTCTATTCCGGTGAGTTGCTCATCAAAGATGTCTATGTTCCATTTAAGAAAGCTTCTTTCATCTTGATTATTTTCCAGTCGTTCATGATATAGAATCCTAAAAGAGATCGAATGGCTGTTTCGCTTTTTATTTCGATTTTGTGAAGTTCCGAACAAACGTATCGGTTTTGTTATTGGTTGATTGCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCAGAGAACAAGCTCGCCGACTCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCCATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATGCCAAAAACTTGCTGCTTGCTAGTAAGGAATAAGGATAAGCTCATCCCTATCTGT ATAGTAATAAAAAGCTGGAAGGCTGGAAGCGTGATTGTGAGGGCTCGATATATCATCCCTTTGCTTCTCCAGTCGGCACAAAGACGAAGCAAGAAGAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCAGAGAACAAGCTCGCCGACTCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCCATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATGCCAAAAACTTGCTGCTTGCTAGTAAGGAATAAGGATAAGCTCATCCCTATCTGT ATAGTAATAAAAAGCTGGAAGGCTGGAAGCGTGATTGTGAGGGCTCGATATATCATCCCTTTGCTTCTCCAGTCGGCACAAAGACGAAGCAAGAAGAATAAGAGCGAAACAGAACTCAGAAATAAAAGTTGGGCTCGAAGCGTGATTGTGAGGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACGGTAGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCAGAGAACAAGCTCGCCGACTCCGATTTCTTCAACTCCTTCGAGGACGATTTTGATGACTCCGACATCAACTGA IVIKSWKAGSVIVRARYIIPLLLQSAQRRSKKNKSETELRNKSWARSVIVRARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADSDFFNSFEDDFDDSDIN
BLAST of Cp4.1LG17g03130 vs. Swiss-Prot
Match: SMAP1_ARATH (Small acidic protein 1 OS=Arabidopsis thaliana GN=SMAP1 PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14 Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: A0A0A0LNK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G166190 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 7.5e-23 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: A0A059B201_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02882 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.4e-21 Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: F6HX06_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00130 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.1e-21 Identity = 52/62 (83.87%), Postives = 60/62 (96.77%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: M5XN22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb015019mg PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18 Identity = 55/91 (60.44%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TrEMBL
Match: U5G8D5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s17410g PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.5e-18 Identity = 49/63 (77.78%), Postives = 57/63 (90.48%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TAIR10
Match: AT4G13520.1 (AT4G13520.1 small acidic protein 1) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15 Identity = 36/62 (58.06%), Postives = 52/62 (83.87%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. TAIR10
Match: AT3G24280.1 (AT3G24280.1 small acidic protein 2) HSP 1 Score: 48.1 bits (113), Expect = 4.3e-06 Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|449458884|ref|XP_004147176.1| (PREDICTED: small acidic protein 1 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|659121545|ref|XP_008460713.1| (PREDICTED: small acidic protein 1 [Cucumis melo]) HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22 Identity = 57/62 (91.94%), Postives = 61/62 (98.39%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|225433324|ref|XP_002285566.1| (PREDICTED: small acidic protein 1 [Vitis vinifera]) HSP 1 Score: 111.7 bits (278), Expect = 9.1e-22 Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|702441693|ref|XP_010023791.1| (PREDICTED: small acidic protein 1 [Eucalyptus grandis]) HSP 1 Score: 109.8 bits (273), Expect = 3.4e-21 Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1
BLAST of Cp4.1LG17g03130 vs. NCBI nr
Match: gi|1000968095|ref|XP_015574032.1| (PREDICTED: small acidic protein 1 [Ricinus communis]) HSP 1 Score: 105.9 bits (263), Expect = 5.0e-20 Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |