Carg11004 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCGTGATTGTGAGGGCTCGATATATCTATCCCTTTGCTTCTCCAGTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGCTGGGCGGCTCGAAGCGTGATTGTGAAGGCTCGATCAGGTAAGAATCTTGATTGATTACAATTTCTTTGCCTCTACATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCTCGATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCTCGATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCTCGATTTTCTTGTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCTCGATTTTCTCGATTTTGTTGTAATTCGCTTCGTTTTTCTTGTTTCTTGTTGTTCGCTTCGATTGTTGTAAGCTTCGCCTGATTTTCTTGTGATTTGAAGCTGTTGTAATTCGCTTCGCCTCGTTCAAAATTCTATTCCGGTGAGTTGCTAATCAAAAGATGTCCATGTTTCATTAATGAAATCTTCTTTGATCTTGATCATTTTCCAGTCGTTCATTATATAGAAGCCTAAAAGAGATCGAATGGTTGTTTCGCTTTTTATTTTGATTTTGTGAAGTTCCGAAGAAACATATTGGTTTTGTTATTGATGATTGCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACAGTAGCGATGGACGTGGATGATGTTGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCCGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTTGAGGACGATTTTGATGACTCTGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCTATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGAT AAGCGTGATTGTGAGGGCTCGATATATCTATCCCTTTGCTTCTCCAGTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGCTGGGCGGCTCGAAGCGTGATTGTGAAGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACAGTAGCGATGGACGTGGATGATGTTGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCCGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTTGAGGACGATTTTGATGACTCTGACATCAACTGAAATTCATTTCCCTGGTTCCATTCGAAACAAGTAGTCAGTTTACTAATCGTATGTTTATTGCTTCTGTTGATGAAACAAGATGATTGATGCTAGTATGTCCTACTGCTTTTTAGGGATTTCAGCACTTCTAGTTTCTTGGCGATAAATTGAAAATTGGAGACTGATTGCTTTTGAGTACTTGATTGGTTATGGCATATTTGCTTGCTTTTCCCTCAACCACAATAATCAACCGTGTAATCTTTGTCATTAGTTACAAGGAAAATTAAGGAGGTGTTTGTATGTAGTAGACAATTCCTGCAACTATGTGCTCCATTCTGATGTTTAGTAATCTATTTTGGACTTTGAGGAAGTCCATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGATAGGTTAGCCTGAATATCCTTCGAGTATAACTGGCTTGGAT AAGCGTGATTGTGAGGGCTCGATATATCTATCCCTTTGCTTCTCCAGTTCGGCACAAAGACGAAGCAAGAAAAATAAGAGCGAAACAGAACTCAGAAATAAAAGCTGGGCGGCTCGAAGCGTGATTGTGAAGGCTCGATCAGCAGCGAGAGGAGAAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAACAGGGATCGACAGTAGCGATGGACGTGGATGATGTTGATCCACTTGAGATATTAGGCGAGGGCGTGATCTCAGCCGAGAACAAGCTCGCCGATGCCGATTTCTTCAACTCCTTTGAGGACGATTTTGATGACTCTGACATCAACTGA KRDCEGSIYLSLCFSSSAQRRSKKNKSETELRNKSWAARSVIVKARSAARGEMRPTPMEFFAEMEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
BLAST of Carg11004 vs. NCBI nr
Match: XP_022964281.1 (small acidic protein 1 [Cucurbita moschata] >XP_022964282.1 small acidic protein 1 [Cucurbita moschata] >XP_022964283.1 small acidic protein 1 [Cucurbita moschata] >XP_022964284.1 small acidic protein 1 [Cucurbita moschata] >XP_023000574.1 small acidic protein 1 [Cucurbita maxima] >XP_023000575.1 small acidic protein 1 [Cucurbita maxima] >XP_023000576.1 small acidic protein 1 [Cucurbita maxima] >XP_023000577.1 small acidic protein 1 [Cucurbita maxima]) HSP 1 Score: 122.1 bits (305), Expect = 1.2e-24 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of Carg11004 vs. NCBI nr
Match: XP_023513491.1 (small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513492.1 small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513494.1 small acidic protein 1 [Cucurbita pepo subsp. pepo] >XP_023513495.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24 Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0
BLAST of Carg11004 vs. NCBI nr
Match: XP_022138785.1 (small acidic protein 1 [Momordica charantia]) HSP 1 Score: 117.1 bits (292), Expect = 4.0e-23 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of Carg11004 vs. NCBI nr
Match: XP_004147176.1 (PREDICTED: small acidic protein 1 [Cucumis sativus] >KGN61541.1 hypothetical protein Csa_2G166190 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 6.7e-23 Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of Carg11004 vs. NCBI nr
Match: XP_008460713.1 (PREDICTED: small acidic protein 1 [Cucumis melo]) HSP 1 Score: 115.9 bits (289), Expect = 8.8e-23 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of Carg11004 vs. TAIR10
Match: AT4G13520.1 (small acidic protein 1) HSP 1 Score: 80.5 bits (197), Expect = 7.4e-16 Identity = 37/62 (59.68%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of Carg11004 vs. TAIR10
Match: AT3G24280.1 (small acidic protein 2) HSP 1 Score: 47.4 bits (111), Expect = 7.0e-06 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of Carg11004 vs. Swiss-Prot
Match: sp|Q9T0H2|SMAP1_ARATH (Small acidic protein 1 OS=Arabidopsis thaliana OX=3702 GN=SMAP1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-14 Identity = 37/62 (59.68%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of Carg11004 vs. Swiss-Prot
Match: sp|Q1ECS0|SMAP2_ARATH (Small acidic protein 2 OS=Arabidopsis thaliana OX=3702 GN=SMAP2 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of Carg11004 vs. TrEMBL
Match: tr|A0A0A0LNK1|A0A0A0LNK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G166190 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.5e-23 Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of Carg11004 vs. TrEMBL
Match: tr|A0A1S3CCM1|A0A1S3CCM1_CUCME (small acidic protein 1 OS=Cucumis melo OX=3656 GN=LOC103499479 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.8e-23 Identity = 58/62 (93.55%), Postives = 61/62 (98.39%), Query Frame = 0
BLAST of Carg11004 vs. TrEMBL
Match: tr|F6HX06|F6HX06_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g00130 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.9e-21 Identity = 53/62 (85.48%), Postives = 60/62 (96.77%), Query Frame = 0
BLAST of Carg11004 vs. TrEMBL
Match: tr|A0A059B201|A0A059B201_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02882 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.2e-21 Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of Carg11004 vs. TrEMBL
Match: tr|A0A2C9W9B6|A0A2C9W9B6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G156300 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |