MELO3C021742 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021742
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glycine cleavage system H family protein
Location	chr12 : 16416054 .. 16419475 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATCAAACCTACTGTTCTGTGAGGTGACATTGATCTCAGATAGCTAATAAAAGTCCCTTTCATGAAACTGTTCTCTTAGAGGCGACGGCAACCCAAAGCATTAGCGGCAAAAAAAGCTTCCGTTCTGAAAAGGGTTTTTACAGAACGCTCTAAGCTTCATCAATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGAATCTCAATTCCCTTCAGAGGATTTGCTTCTGGTGAGCCCAACTCCACGTTTTTTTTACTTTTTGATGTACTGATTTTTCACCATTCTTTCTCATTTTATATTAGTTTCTTCTTAGCGAAACAAAAGGGAAACTGATCGATCTGCTTTTGGCATTGAAAGATCTTGGTTTCCAATGATGGGTTTTGTTTCTCTTTCTGTTTGTTTGATCAATGGCAGACTCTTTTCAAGAATTGCAGGATTTGTCTCCAATTTTTTTTTTTTAAGTATCGGTGTCACGTCTCCTTGTCTGGTGAATGATTGAGTTGAGGTGATTATATTATGAATATTTGTGGGCAGATCTTAGGAAAATGGATAAATGGTTTTTTAAAACAAGAAAAACAAAGTTTTCTTTTACTATATTTTCTGTCTCGGGTCTCCCGCATTGATTCTCTAATGAATATTTTTGCCGTTCTTGTTTATGATTTTTGAAATTTGGATCGGTTGTGGGGTTCATAGATGTTATTCTACTTACAAATCATTTGTTGGATATACATTTCCCTTCACCTTCCTTTTGAATTATCATGTGATGAATCTCAATATTCGATATTATGTTATGCTCTACTTGCCTTTTTTCTCTTCGTCATTTCATTTGTTTGTGTTCTTAATTCAATCTTGTCATTTAAACTAACATCTGTGCCTTGGTGAAGTTTCTAGCTGCTGATATTGTTAAATATGTAGTTTTCGAGTTTTATTAAGAATCTTCGTCCCTTGATTTATCATTTTCAATAACTTCTGTTTGGCTTCTATAACCAAAATGGAATACTAATTTTCAGAAGATTGCACTTTGTATTCTTGATATTTGCATCTTCTAAACAATATAATCAAAGGGATGGGGTGTAGAAGTATAAATCCAAATGAGAAGCAAAAGAAGCACTTATACTAAGACACACTATATCGCATAGTCTTGTGGAAATGCAAGCATTTGTTTTGTTATCTTGTGGCGTTAAGAATCTAACCACTGACTTCGAGGTGAATAGTACAAACTTAACTTTATGACATCTAGCTATGTTCATTTTTGGTGCAAAGGCAAGTATGCTAACATCTTACAAACAAAGAAAATTGAGAATAGAATGTTTCATACAGCATATGATGGACAATGATTAATTTCTCGTCATCAAAAGAAACTGTGGAATATTTAATATCCAAGTTTATGTCTAAAACTACTTGAGTATAGAGAAATAACTTGTACCTCCCATTGTGCAGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGGACAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTGGGTGATGTTGTCTATGTAGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGTTTCGGTGCGGTAGAAAGTGTTAAAGCTACCAGTGATATCAACTCTCCAGTGTCGGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGCTCCCCTGGTCTGGTGGGTTCCTGGATCTGTTATTTTTGCTCTTAATTCTCTATTTTTGGATACTTTAAGATGGTTTGTATTTAATAACTGACTTGAGTCTTAGGATTGATTAGAGAAAAAAATGTGTTTTTTAAACAGTTTTATTTAAACTCTTCGATAAAAACAGTTTAAAATTTACTTCAAAAGCTATTTTAAATTGTTGTCAAATAATGGAATTTTGTCCAAAATGACTTATCTTTTAAATTAAAAAAACTTGAAATTGTATTCCACCCTTAGTTTCAATGCCTTTCTTTCTAGAAGAACGGATACAAATACGAGACACGGATAGAACATGACACAGTACATAGCGACGCATAGTTTTGAAGAATCTAAAACACATTTATTAAACATACGTTTTTAAAATATGTATCATTTTTATATCCGAAGAAAATTCAAAGTTAATGTGTTGATGCATATATGCTTAAAAAAATAGTTTGATGTATTTCAAACTACAAAATTATTATTATTGTTTTATATGTATCTTTTTAATTCATTTAACAAGTGCTCTAGCATGTCTAACATATTTGCTGCATAATACAAACGTGTCCAACAATTGTCAGATTGTCCAAGGGTTTGACACTTGTCGGACACAAACACACAAGTCAGATTAAACTTTCTTTGCTTCATAGCATGTCTATGTGGGTGATATAAAGAGGTACACATGTGTATGAACTAATAGCTTGTTTCTTTTTCAGAAGAAACTTATAAAGATCTGTTTAATCTAAATGTGCAAGGGTTAAAATTTGTTGGACATTTTACATATACGAACTTTTTTAAATTTTTCCTTTTCTTTCTTTTTTAAAAAGATACCAACTCTTCTTGTGTCATGAAAATGTTGTCATTGGAGTTTGCATATTGCATATTCTAAATTCTCTAGATTTTACACCCATGTTCAGGGATCGACCTGCCAATACCTTTGGATGTTTTCTTAACAATTACCATTTCTTTGACTATCCTTCCTTTGTGTATATTGAAAACTTTCTAGTCATTTTGTAACTTGATGATTGTAATCATACACACACTTACGCAGGAACATTCTGGATCACTTCTGCAATTATCCTTTGTTTCTTATTCTCTATACTTTCCTGCATCTTACTGGATAGATAACGTTTATTTATACAAATCTAACTGGATAGATAACGTTTTTGTAGTTTTATTTGTGTTCTTTGTATATGATGAACATATGAGTGAGTCCTTTGCCAACAAATGAAAACAGCAAAGAACCATCACTTAGTTTTCTTTCTTCTAATCCGGGTTATGGTTGTTTTTGATCCATTTTTGTCTCTGTAGGTGAACTCAAGCCCATATGAAAATGGATGGATTATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAATACTCCAAGTTTTGTGAAGAAGAAGATTCAAAGCATTGAGTGTTCATAGAGATGTTTGAAGAAGTGAGCAGCTGGGAGAGACAACTCTGCATCAGATCAGTTGTTTCCTTCTGTGGGTTAGCCACAGATTGCACATCTTTCTTCCTTTTTCTTTTTCTTTCTGTTTTCTGGATTCTCTGTCCTTTGTAAGACTCGCTAAATTGGTGGAATTTTTCCCACTCAGATGAATAATTTAATCTCTTTGAATCTCCAACTAGTGGTATAATAATGGAAATTTCTAGTAAAAACTATCTACATATTT

mRNA sequence

ACCATCAAACCTACTGTTCTGTGAGGTGACATTGATCTCAGATAGCTAATAAAAGTCCCTTTCATGAAACTGTTCTCTTAGAGGCGACGGCAACCCAAAGCATTAGCGGCAAAAAAAGCTTCCGTTCTGAAAAGGGTTTTTACAGAACGCTCTAAGCTTCATCAATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGAATCTCAATTCCCTTCAGAGGATTTGCTTCTGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGGACAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTGGGTGATGTTGTCTATGTAGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGTTTCGGTGCGGTAGAAAGTGTTAAAGCTACCAGTGATATCAACTCTCCAGTGTCGGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGCTCCCCTGGTCTGGTGAACTCAAGCCCATATGAAAATGGATGGATTATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAATACTCCAAGTTTTGTGAAGAAGAAGATTCAAAGCATTGAGTGTTCATAGAGATGTTTGAAGAAGTGAGCAGCTGGGAGAGACAACTCTGCATCAGATCAGTTGTTTCCTTCTGTGGGTTAGCCACAGATTGCACATCTTTCTTCCTTTTTCTTTTTCTTTCTGTTTTCTGGATTCTCTGTCCTTTGTAAGACTCGCTAAATTGGTGGAATTTTTCCCACTCAGATGAATAATTTAATCTCTTTGAATCTCCAACTAGTGGTATAATAATGGAAATTTCTAGTAAAAACTATCTACATATTT

Coding sequence (CDS)

ATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGAATCTCAATTCCCTTCAGAGGATTTGCTTCTGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGGACAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTGGGTGATGTTGTCTATGTAGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGTTTCGGTGCGGTAGAAAGTGTTAAAGCTACCAGTGATATCAACTCTCCAGTGTCGGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGCTCCCCTGGTCTGGTGAACTCAAGCCCATATGAAAATGGATGGATTATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAATACTCCAAGTTTTGTGAAGAAGAAGATTCAAAGCATTGA

Protein sequence

MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH*

Homology

[Close]

BLAST of MELO3C021742 vs. Swiss-Prot
Match: GCSH2_ARATH (Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=GDH2 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.7e-66
Identity = 124/156 (79.49%), Postives = 138/156 (88.46%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVV-KDLKYATSHEWVKVEGDKATVGITDHAQDHL 60
           MA RL WASR AS+LRIS+  RGF+SVV KDLKYA SHEWVK++G+KAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           E GWIIKVE+SD+GE + LMDS++YSKFCEEED+KH
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

[Close]

BLAST of MELO3C021742 vs. Swiss-Prot
Match: GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.6e-50
Identity = 97/158 (61.39%), Postives = 121/158 (76.58%), Query Frame = 1


Query: 6   VWASRAASYLRISIPFRG--------FASVVKDLKYATSHEWVKVEGDKATVGITDHAQD 65
           +WAS  A+ LR+S   R         F+SV+  LKYA SHEWVK EG  AT+GITDHAQD
Sbjct: 5   IWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQD 64

Query: 66  HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSS 125
           HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PGL+NSS
Sbjct: 65  HLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSS 124

Query: 126 PYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           PYE+GW+IKV+ S+  EL +LM +++Y+KFCEEEDS H
Sbjct: 125 PYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

[Close]

BLAST of MELO3C021742 vs. Swiss-Prot
Match: GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-49
Identity = 99/163 (60.74%), Postives = 124/163 (76.07%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRG--------FASVVKDLKYATSHEWVKVEGDKATVGIT 60
           MA R+ WAS  A+ LR+S   R         F+SV+  LKYA SHEWVK EG  AT+GIT
Sbjct: 1   MALRM-WASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGIT 60

Query: 61  DHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPG 120
           DHAQDHLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PG
Sbjct: 61  DHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPG 120

Query: 121 LVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           L+NSSPYE+GW+IKV+ S+  EL +LM +++Y+KFCEEED+ H
Sbjct: 121 LINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

[Close]

BLAST of MELO3C021742 vs. Swiss-Prot
Match: GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.3e-48
Identity = 100/166 (60.24%), Postives = 127/166 (76.51%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISI--------PF---RGFASVVKDLKYATSHEWVKVEGDKATV 60
           MA R+ WAS  A+ L++S         PF   R F++V++ LKYA SHEWVK EG  AT+
Sbjct: 1   MALRM-WASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSS 120
           GIT HAQDHLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ 
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           SPGL+NSSPYE+GW+IKV+ S   EL++LM  ++Y+KFCEEED+ H
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of MELO3C021742 vs. Swiss-Prot
Match: GCSH3_ARATH (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana GN=GDH3 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.3e-48
Identity = 99/167 (59.28%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRIS--------IPF----RGFASVVKDLKYATSHEWVKVEGDKAT 60
           MA R+ WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG  AT
Sbjct: 1   MALRM-WASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  VGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELS 120
           +GITDHAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 SSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            SPGL+NSSPYE+GW+IKV+ S   EL+ LM  ++Y+KFCEEED+ H
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of MELO3C021742 vs. TrEMBL
Match: A0A0A0M3S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701910 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 6.6e-80
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQ HLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELK LMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. TrEMBL
Match: V4UCP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017047mg PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 5.8e-68
Identity = 126/155 (81.29%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+  RGF+SV+KDLKYA SHEWVKV+G+ AT+GITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVFHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +VKQ  SFGAVESVKATSD+NSPVSGK++EVNEELSSSP LVNSSPY+
Sbjct: 61  DVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYK 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           +GWIIKVE+  +GELK LMD++QY+KFCEEEDSKH
Sbjct: 121 DGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. TrEMBL
Match: A0A151SJN8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_001152 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 9.8e-68
Identity = 129/155 (83.23%), Postives = 141/155 (90.97%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MA R +WASRAASYLRIS+  RGF++VVKDLKYA SHEWVKV+G+ ATVGITDHAQDHLG
Sbjct: 1   MACRQLWASRAASYLRISVFHRGFSNVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +V Q  SFGAVESVKATSDINSPVSGK++EVNEEL SSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGAAVTQGASFGAVESVKATSDINSPVSGKVVEVNEELHSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVE+SD+GEL NLMD E+YSKFCEEEDSKH
Sbjct: 121 NGWIIKVEMSDNGELNNLMDPEKYSKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. TrEMBL
Match: A0A0B0MCZ1_GOSAR (Glycine cleavage system H, mitochondrial OS=Gossypium arboreum GN=F383_17532 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-67
Identity = 126/155 (81.29%), Postives = 143/155 (92.26%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MAS ++WASRAASYLRIS+  RGF++V+KDLKYA SHEWVKVEG+ AT+GITDHAQDHLG
Sbjct: 1   MASSMLWASRAASYLRISVFHRGFSTVLKDLKYADSHEWVKVEGNSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +VKQ  SFGAVESVKATSD+NSPVSGK++EVNEELS SP  VNSSPYE
Sbjct: 61  DVVYVELPEVGAAVKQGESFGAVESVKATSDVNSPVSGKVVEVNEELSGSPAKVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           +GWIIKVE+ D+GEL+NLMDSE+YSKFCEEEDSKH
Sbjct: 121 DGWIIKVEMKDAGELRNLMDSEEYSKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. TrEMBL
Match: A0A0D2R9H9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G048100 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-67
Identity = 126/155 (81.29%), Postives = 143/155 (92.26%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MAS ++WASRAASYLRIS+  RGF++V+KDLKYA SHEWVKVEG+ AT+GITDHAQDHLG
Sbjct: 1   MASSMLWASRAASYLRISVFHRGFSTVLKDLKYADSHEWVKVEGNSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +VKQ  SFGAVESVKATSD+NSPVSGK++EVN+ELS SP  VNSSPYE
Sbjct: 61  DVVYVELPEVGAAVKQGESFGAVESVKATSDVNSPVSGKVVEVNDELSGSPAKVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           +GWIIKVE+ D+GELKNLMDSE+YSKFCEEEDSKH
Sbjct: 121 DGWIIKVEMKDAGELKNLMDSEEYSKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. TAIR10
Match: AT2G35120.1 (AT2G35120.1 Single hybrid motif superfamily protein)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-67
Identity = 124/156 (79.49%), Postives = 138/156 (88.46%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVV-KDLKYATSHEWVKVEGDKATVGITDHAQDHL 60
           MA RL WASR AS+LRIS+  RGF+SVV KDLKYA SHEWVK++G+KAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           E GWIIKVE+SD+GE + LMDS++YSKFCEEED+KH
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

[Close]

BLAST of MELO3C021742 vs. TAIR10
Match: AT2G35370.1 (AT2G35370.1 glycine decarboxylase complex H)

HSP 1 Score: 192.6 bits (488), Expect = 1.8e-49
Identity = 100/166 (60.24%), Postives = 127/166 (76.51%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISI--------PF---RGFASVVKDLKYATSHEWVKVEGDKATV 60
           MA R+ WAS  A+ L++S         PF   R F++V++ LKYA SHEWVK EG  AT+
Sbjct: 1   MALRM-WASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSS 120
           GIT HAQDHLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ 
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           SPGL+NSSPYE+GW+IKV+ S   EL++LM  ++Y+KFCEEED+ H
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of MELO3C021742 vs. TAIR10
Match: AT1G32470.1 (AT1G32470.1 Single hybrid motif superfamily protein)

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-49
Identity = 99/167 (59.28%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRIS--------IPF----RGFASVVKDLKYATSHEWVKVEGDKAT 60
           MA R+ WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG  AT
Sbjct: 1   MALRM-WASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  VGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELS 120
           +GITDHAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 SSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            SPGL+NSSPYE+GW+IKV+ S   EL+ LM  ++Y+KFCEEED+ H
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of MELO3C021742 vs. NCBI nr
Match: gi|659118255|ref|XP_008459025.1| (PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. NCBI nr
Match: gi|449455395|ref|XP_004145438.1| (PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 9.4e-80
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQ HLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELK LMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. NCBI nr
Match: gi|568828311|ref|XP_006468487.1| (PREDICTED: glycine cleavage system H protein 2, mitochondrial [Citrus sinensis])

HSP 1 Score: 269.6 bits (688), Expect = 3.4e-69
Identity = 128/155 (82.58%), Postives = 146/155 (94.19%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+  RGF+SV+KDLKYA SHEWVKV+G+ AT+GITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVFHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +VKQD SFGAVESVKATSD+NSPVSGK++EVNEELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGVTVKQDASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           +GWIIKVE+ ++GELK LMD++QY+KFCEEEDSKH
Sbjct: 121 DGWIIKVEMDNAGELKKLMDADQYTKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. NCBI nr
Match: gi|567912773|ref|XP_006448700.1| (hypothetical protein CICLE_v10017047mg [Citrus clementina])

HSP 1 Score: 265.0 bits (676), Expect = 8.3e-68
Identity = 126/155 (81.29%), Postives = 144/155 (92.90%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+  RGF+SV+KDLKYA SHEWVKV+G+ AT+GITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVFHRGFSSVIKDLKYADSHEWVKVDGNSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +VKQ  SFGAVESVKATSD+NSPVSGK++EVNEELSSSP LVNSSPY+
Sbjct: 61  DVVYVELPEVGVTVKQGASFGAVESVKATSDVNSPVSGKVVEVNEELSSSPALVNSSPYK 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           +GWIIKVE+  +GELK LMD++QY+KFCEEEDSKH
Sbjct: 121 DGWIIKVEMDSAGELKKLMDADQYTKFCEEEDSKH 155

[Close]

BLAST of MELO3C021742 vs. NCBI nr
Match: gi|1012343759|gb|KYP54951.1| (hypothetical protein KK1_001152 [Cajanus cajan])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67
Identity = 129/155 (83.23%), Postives = 141/155 (90.97%), Query Frame = 1


Query: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60
           MA R +WASRAASYLRIS+  RGF++VVKDLKYA SHEWVKV+G+ ATVGITDHAQDHLG
Sbjct: 1   MACRQLWASRAASYLRISVFHRGFSNVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG +V Q  SFGAVESVKATSDINSPVSGK++EVNEEL SSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGAAVTQGASFGAVESVKATSDINSPVSGKVVEVNEELHSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVE+SD+GEL NLMD E+YSKFCEEEDSKH
Sbjct: 121 NGWIIKVEMSDNGELNNLMDPEKYSKFCEEEDSKH 155

The following BLAST results are available for this feature:

BLAST of MELO3C021742 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GCSH2_ARATH	2.7e-66	79.49	Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana GN=GD...	[more]
GCSH_FLAPR	4.6e-50	61.39	Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei GN=GDCSH P...	[more]
GCSH_FLAAN	1.3e-49	60.74	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala GN=GDCSH PE...	[more]
GCSH1_ARATH	3.3e-48	60.24	Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana GN=GD...	[more]
GCSH3_ARATH	4.3e-48	59.28	Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana GN=GD...	[more]

BLAST of MELO3C021742 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3S2_CUCSA	6.6e-80	98.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701910 PE=3 SV=1	[more]
V4UCP4_9ROSI	5.8e-68	81.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017047mg PE=3 SV=1	[more]
A0A151SJN8_CAJCA	9.8e-68	83.23	Uncharacterized protein OS=Cajanus cajan GN=KK1_001152 PE=3 SV=1	[more]
A0A0B0MCZ1_GOSAR	1.3e-67	81.29	Glycine cleavage system H, mitochondrial OS=Gossypium arboreum GN=F383_17532 PE=...	[more]
A0A0D2R9H9_GOSRA	1.3e-67	81.29	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G048100 PE=3 SV=1	[more]

BLAST of MELO3C021742 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35120.1	1.5e-67	79.49	Single hybrid motif superfamily protein	[more]
AT2G35370.1	1.8e-49	60.24	glycine decarboxylase complex H	[more]
AT1G32470.1	2.4e-49	59.28	Single hybrid motif superfamily protein	[more]

BLAST of MELO3C021742 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118255\|ref\|XP_008459025.1\|	2.9e-81	100.00	PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo]	[more]
gi\|449455395\|ref\|XP_004145438.1\|	9.4e-80	98.71	PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis sativus]	[more]
gi\|568828311\|ref\|XP_006468487.1\|	3.4e-69	82.58	PREDICTED: glycine cleavage system H protein 2, mitochondrial [Citrus sinensis]	[more]
gi\|567912773\|ref\|XP_006448700.1\|	8.3e-68	81.29	hypothetical protein CICLE_v10017047mg [Citrus clementina]	[more]
gi\|1012343759\|gb\|KYP54951.1\|	1.4e-67	83.23	hypothetical protein KK1_001152 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000089	Biotin_lipoyl
IPR002930	GCV_H
IPR003016	2-oxoA_DH_lipoyl-BS
IPR011053	Single_hybrid_motif
IPR017453	GCV_H_sub

Vocabulary: **Cellular Component**
Term	Definition
GO:0005960	glycine cleavage complex

Vocabulary: **Biological Process**
Term	Definition
GO:0019464	glycine decarboxylation via glycine cleavage system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019464	glycine decarboxylation via glycine cleavage system
biological_process	GO:0009750	response to fructose
biological_process	GO:0009749	response to glucose
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0005960	glycine cleavage complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU49381	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021742T1	MELO3C021742T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU49381	MU49381	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000089	Biotin/lipoyl attachment	PROFILE	PS50968	BIOTINYL_LIPOYL	coord: 46..128 score: 30
IPR002930	Glycine cleavage system H-protein	HAMAP	MF_00272	GcvH	coord: 28..149 score: 29
IPR002930	Glycine cleavage system H-protein	PANTHER	PTHR11715	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..155 score: 7.5E
IPR002930	Glycine cleavage system H-protein	PFAM	PF01597	GCV_H	coord: 31..150 score: 4.3
IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	PROSITE	PS00189	LIPOYL	coord: 71..100 scor
IPR011053	Single hybrid motif	unknown	SSF51230	Single hybrid motif	coord: 27..150 score: 1.3
IPR017453	Glycine cleavage system H-protein, subgroup	TIGRFAMs	TIGR00527	TIGR00527	coord: 28..152 score: 1.8
None	No IPR available	GENE3D	G3DSA:2.40.50.100		coord: 29..151 score: 1.7
None	No IPR available	PANTHER	PTHR11715:SF9	SUBFAMILY NOT NAMED	coord: 1..155 score: 7.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021742	Csa1G701910	Cucumber (Chinese Long) v2	cumeB017
MELO3C021742	Cla004609	Watermelon (97103) v1	mewmB156
MELO3C021742	ClCG01G009540	Watermelon (Charleston Gray)	mewcgB140
MELO3C021742	Cla97C01G009760	Watermelon (97103) v2	mewmbB141
MELO3C021742	Bhi08G000720	Wax gourd	mewgoB164
MELO3C021742	CSPI01G34390	Wild cucumber (PI 183967)	cpimeB013
MELO3C021742	Cucsa.332790	Cucumber (Gy14) v1	cgymeB543
MELO3C021742	CmaCh13G004250	Cucurbita maxima (Rimu)	cmameB192
MELO3C021742	CmoCh13G004550	Cucurbita moschata (Rifu)	cmomeB179
MELO3C021742	Lsi02G010550	Bottle gourd (USVL1VR-Ls)	lsimeB180
MELO3C021742	Cp4.1LG20g06170	Cucurbita pepo (Zucchini)	cpemeB477
MELO3C021742	CsGy1G032860	Cucumber (Gy14) v2	cgybmeB012
MELO3C021742	CsaV3_1G046250	Cucumber (Chinese Long) v3	cucmeB012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021742	Cucurbita pepo (Zucchini)	cpemeB027
MELO3C021742	Silver-seed gourd	carmeB0119
MELO3C021742	Cucurbita maxima (Rimu)	cmameB364
MELO3C021742	Cucurbita moschata (Rifu)	cmomeB357