Cla97C01G009760 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G009760
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Glycine cleavage system H protein
Location	Cla97Chr01 : 12711843 .. 12714292 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGGATCTCAATTCCCCATAGAGGGTTTGCTTCTGGTGAGCCGAACCCACATTTTTTAATGTCCTGATTTTCCTCATCCGTTCTGGTGAGCCGAAAACAAGTGAAACTGATCGATCTGCTTTTGACATTGAAAGATCTCAGTTTCCCATGATGGGGTTTGTTACTCTTTGTTGTTTGTTTGATCAATGGCAGACCCTTTTCAAGAACTGCAGGATTTGTCTCGTTTTTTTTTTTTTTTTTTTTTTGTATGGCTGTCACGTCTCATTGTCTTGTGAATGATTGAGGTGATTATATAATGAATATTTGTGGGTAGATCTTAGGCAGATGAATAAATTTTTTTTTTTTAAATAAGAAAAATAAAGTTTTCGTTTACTATGTTTTCTGTTATGTGTCTTCCCCTTCTCCCCCATTGATTATTTAATGAATATTTGCCATTCTTCTTTATGGTTTTTTGAAATTTGAATCGGTTGTTGGGTTCACTGATGTTATCTATTCATGTGCATTTGTTGAGTATACACATCTTTTCACCTTCCATTTGAATTATGATTTGATGAATCTCAAATATTAGATATTCTATTCTATTCTACTTGCCTTTTTTCTCTCCTTCATTTTATTTGTTTATGTGTTTTTCTTTCAATCTTGTCATTTGAATTAACATCTGTGCCTTGGTGAACTTTCTAGCTGCTGATATTGTTAACTATGTAGTTTTCTAGTTTTAATATCAATCTTCGTCCCAACAGTATGCCACTTTCCCAACAGTAACTTTCTGTTCGTCTACCAACATGTGACAGTAATTTTCGTTTCCAGAAGTTTGCACTTCATATTCTGATATTTGCATCTACTAACCAATATTAATCAAAGGGATGGGATGTAGAAGTATAAATCCATATGAAGCAAAAGAAACATATGTACATTTGTACAAGACACACTATATAGCATAGTCTTATAAGAAGGCAAGCATTTTTTTTTTTTATTTAAAATGTGTGGGTAAGAGAATCAAACTTCTAACGTCGAGTTTGATAGTACAAGTTTTACGCCATTGAGGTATGCTACTTTTTGGCATAAAGGCAATCATGATACCGTCTTACAAACGAAGAAACTTGAGAATAAAATGTTCCATACAGTTACATGATTGCAAAAGGAAGTCCAATATTTCTAATCAAAATGCATTAATTTCTCTTTATCAAAAAGAAACTATGGAATATCTAACCTTCAATTTTATGTATAAAACTACATGAGTCAAAGAAATAACTTGTACATCAAAATGTGCAGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGAATAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTAGGTGATGTTGTCTATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATAAACTCTCCTGTGTCAGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGTTCCCCTGGTCTGGTAGGTTCCTTGATCTAATATTCTTGCTCTGAATAATGACCTGACAGTTGCTCTGGTGAGATTTAAGCTTATTTTCTTTCTTCCTTCCACTTTTGGATACTTTCAACAAATGACTTGAGTCTTAGTTTCATTACTTGACATGTCTATGTTGCCAAATACCACAACCCCTCCCCCCTTCAAATTTGATAGAAAGATCTGGTTAAAGTAAATTTGTAAGTGTAAGGGATACATATACTACACCTTTTTTTTCTTTGCAAAAGATACCAACTCTTCTTGAGTAGCATGAAAATGTTGCCATTGGAGTTTGCATATTGCATATTCTAAATTCTTAGGATTTTACAGCCTTCTTTGACTATATCCAGGAGACAACCTGCCAATACCTTTGGATGTTTTCTTGACAATTACCATTTCTTTTACTATCCTCCCCATTGCGTCTATTGATAACTTTCTAGTCATTTTGTAACTTGGTGATTGTAAAATACACACATACACAGCAACATTCTGGATCACTTTTGTAATTATCCTTTGTTCCTTATTCTTTGTCCTTTCCTGCATCTTAATGAAAGTTAAGGGAAAGTTTCTTTGTTTATACAAATCTAACTAGATAGCACTTTTTTAGTTTTCTTTGAATATGAGTATATGAGTAGCCTTTTGTCATCAAATGAAAGCTAAAAAGAACCATCACTTAGTTTTCTTTCTCCAAAGCAGGTTTAAGGTTGCTTTTGATCCATTTGTGTTAATGTAGGTGAACTCAAGTCCATATGAAAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAGTACTCCAAGTTCTGTGAAGAAGAAGATTCAAAGCACTGA

mRNA sequence

ATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGGATCTCAATTCCCCATAGAGGGTTTGCTTCTGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGAATAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTAGGTGATGTTGTCTATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATAAACTCTCCTGTGTCAGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGTTCCCCTGGTCTGGTGAACTCAAGTCCATATGAAAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAGTACTCCAAGTTCTGTGAAGAAGAAGATTCAAAGCACTGA

Coding sequence (CDS)

ATGGCGTCCAGATTGGTTTGGGCTTCAAGAGCTGCTTCTTATCTCAGGATCTCAATTCCCCATAGAGGGTTTGCTTCTGTTGTGAAGGACTTGAAATATGCTACCTCTCATGAATGGGTGAAAGTAGAAGGGAATAAAGCAACTGTTGGCATAACTGATCATGCTCAAGATCATTTAGGTGATGTTGTCTATGTTGAATTACCAGAAGTTGGAACCTCTGTTAAACAGGATGGCAGCTTTGGTGCGGTAGAAAGCGTTAAAGCTACCAGTGATATAAACTCTCCTGTGTCAGGGAAAATCATTGAGGTCAATGAAGAGCTCAGCAGTTCCCCTGGTCTGGTGAACTCAAGTCCATATGAAAATGGATGGATAATTAAGGTGGAGGTTAGTGACAGTGGTGAACTGAAAAACTTGATGGACTCTGAGCAGTACTCCAAGTTCTGTGAAGAAGAAGATTCAAAGCACTGA

Protein sequence

MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH

Homology

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BLAST of Cla97C01G009760 vs. NCBI nr
Match: XP_008459025.1 (PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-78
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. NCBI nr
Match: XP_022142648.1 (glycine cleavage system H protein 2, mitochondrial [Momordica charantia])

HSP 1 Score: 296.6 bits (758), Expect = 5.0e-77
Identity = 148/155 (95.48%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+PHRG ASV+KDLKYATSHEWVKVEGN+ATVGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVPHRGSASVLKDLKYATSHEWVKVEGNQATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVS+SGELKNLMDS+QYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSESGELKNLMDSDQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. NCBI nr
Match: XP_004145438.1 (PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis sativus] >KGN66866.1 hypothetical protein Csa_1G701910 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 6.5e-77
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQ HLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELK LMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. NCBI nr
Match: XP_023001624.1 (glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_023001626.1 glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_023001627.1 glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima] >XP_023001628.1 glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 6.5e-77
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASR ASYLRISIPHRGFASVVKDLKYATSHEWVKVEG+KAT+GITDHAQDHLG
Sbjct: 1   MASRLVWASRVASYLRISIPHRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSP LVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPALVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDS ELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSDELKNLMDSEQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. NCBI nr
Match: XP_022927059.1 (glycine cleavage system H protein 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 5.5e-76
Identity = 145/155 (93.55%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAAS+LRISIP+RGFASVVKDLKYATSHEWVKVEG+KAT+GITDHAQDHLG
Sbjct: 1   MASRLLWASRAASFLRISIPYRGFASVVKDLKYATSHEWVKVEGDKATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPE+G SVKQDGSFGAVESVKATSDINSPVSGKI+EVN+ELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEIGASVKQDGSFGAVESVKATSDINSPVSGKIVEVNDELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDS ELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSNELKNLMDSEQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. TrEMBL
Match: tr|A0A1S3C983|A0A1S3C983_CUCME (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103498256 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.3e-78
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQDHLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. TrEMBL
Match: tr|A0A0A0M3S2|A0A0A0M3S2_CUCSA (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_1G701910 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.3e-77
Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRLVWASRAASYLRISIP RGFASVVKDLKYATSHEWVKVEG+KATVGITDHAQ HLG
Sbjct: 1   MASRLVWASRAASYLRISIPFRGFASVVKDLKYATSHEWVKVEGDKATVGITDHAQGHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSDSGELK LMDSEQYSKFCEEEDSKH
Sbjct: 121 NGWIIKVEVSDSGELKKLMDSEQYSKFCEEEDSKH 155

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BLAST of Cla97C01G009760 vs. TrEMBL
Match: tr|A0A2I4HSD2|A0A2I4HSD2_9ROSI (Glycine cleavage system H protein OS=Juglans regia OX=51240 GN=LOC109020964 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 8.6e-70
Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+ HRGF+SV+KDLKYA SHEWVKVEGN ATVGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVFHRGFSSVLKDLKYADSHEWVKVEGNSATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG  V+Q   FGAVESVKATSDINSPVSGKI+EVNEELSSSPGLVNSSPYE
Sbjct: 61  DVVYVELPEVGAPVEQGSGFGAVESVKATSDINSPVSGKIVEVNEELSSSPGLVNSSPYE 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            GWIIKVEVSDS ELKNLMD+++YSKFCEEED+KH
Sbjct: 121 KGWIIKVEVSDSDELKNLMDADKYSKFCEEEDAKH 155

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BLAST of Cla97C01G009760 vs. TrEMBL
Match: tr|A0A2I4G0A6|A0A2I4G0A6_9ROSI (Glycine cleavage system H protein OS=Juglans regia OX=51240 GN=LOC109003585 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 133/155 (85.81%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+ HRGF+SV+KDLKYA SHEWVKVEGN ATVGITDHAQDHLG
Sbjct: 1   MASRLLWASRAASYLRISVFHRGFSSVLKDLKYADSHEWVKVEGNSATVGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG  V+Q   FGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY+
Sbjct: 61  DVVYVELPEVGAPVEQGSGFGAVESVKATSDINSPVSGKVLEVNEELNDSPGLVNSSPYD 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            GWIIKVEVSDSGELKNLMD++QYSKFCEEED+KH
Sbjct: 121 KGWIIKVEVSDSGELKNLMDADQYSKFCEEEDAKH 155

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BLAST of Cla97C01G009760 vs. TrEMBL
Match: tr|A0A1Q3D2L6|A0A1Q3D2L6_CEPFO (Glycine cleavage system H protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30109 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 131/155 (84.52%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQDHLG 60
           MASRL+WASRAASYLRIS+ HRGF+SVVKDLKYA SHEWVK++GN AT+GITDHAQDHLG
Sbjct: 1   MASRLMWASRAASYLRISVFHRGFSSVVKDLKYADSHEWVKIDGNSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPYE 120
           DVVYVELPEVG SV Q G FGAVESVKATSDI SPVSGK++EVNEELS+SPGLVNSSPY+
Sbjct: 61  DVVYVELPEVGASVTQGGGFGAVESVKATSDIYSPVSGKVVEVNEELSNSPGLVNSSPYD 120

Query: 121 NGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           NGWIIKVEVSD+GE+KNLMD++QYS FC+EEDSKH
Sbjct: 121 NGWIIKVEVSDAGEIKNLMDADQYSNFCDEEDSKH 155

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BLAST of Cla97C01G009760 vs. Swiss-Prot
Match: sp|O82179|GCSH2_ARATH (Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH2 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.6e-66
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVV-KDLKYATSHEWVKVEGNKATVGITDHAQDHL 60
           MA RL WASR AS+LRIS+  RGF+SVV KDLKYA SHEWVK++GNKAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           E GWIIKVE+SD+GE + LMDS++YSKFCEEED+KH
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

[Close]

BLAST of Cla97C01G009760 vs. Swiss-Prot
Match: sp|P49359|GCSH_FLAPR (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 7.8e-50
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 0


Query: 6   VWASRAASYLRISI---PH-----RGFASVVKDLKYATSHEWVKVEGNKATVGITDHAQD 65
           +WAS  A+ LR+S    PH     R F+SV+  LKYA SHEWVK EG+ AT+GITDHAQD
Sbjct: 5   IWASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGITDHAQD 64

Query: 66  HLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSS 125
           HLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PGL+NSS
Sbjct: 65  HLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSS 124

Query: 126 PYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           PYE+GW+IKV+ S+  EL +LM +++Y+KFCEEEDS H
Sbjct: 125 PYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

[Close]

BLAST of Cla97C01G009760 vs. Swiss-Prot
Match: sp|Q39732|GCSH_FLAAN (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-49
Identity = 101/163 (61.96%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISI---PH-----RGFASVVKDLKYATSHEWVKVEGNKATVGIT 60
           MA R+ WAS  A+ LR+S    PH     R F+SV+  LKYA SHEWVK EG+ AT+GIT
Sbjct: 1   MALRM-WASSTANALRLSSATRPHFSPLSRCFSSVLDGLKYANSHEWVKHEGSVATIGIT 60

Query: 61  DHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPG 120
           DHAQDHLG+VV+V+LPE G SV +   FGAVESVKATSD+NSP+SG+I+EVN +LS +PG
Sbjct: 61  DHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSETPG 120

Query: 121 LVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           L+NSSPYE+GW+IKV+ S+  EL +LM +++Y+KFCEEED+ H
Sbjct: 121 LINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

[Close]

BLAST of Cla97C01G009760 vs. Swiss-Prot
Match: sp|Q9LQL0|GCSH3_ARATH (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-47
Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRIS--------IP----HRGFASVVKDLKYATSHEWVKVEGNKAT 60
           MA R+ WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG+ AT
Sbjct: 1   MALRM-WASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  VGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELS 120
           +GITDHAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 SSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            SPGL+NSSPYE+GW+IKV+ S   EL+ LM  ++Y+KFCEEED+ H
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Cla97C01G009760 vs. Swiss-Prot
Match: sp|P25855|GCSH1_ARATH (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 98/166 (59.04%), Postives = 128/166 (77.11%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIP-----------HRGFASVVKDLKYATSHEWVKVEGNKATV 60
           MA R+ WAS  A+ L++S              R F++V++ LKYA SHEWVK EG+ AT+
Sbjct: 1   MALRM-WASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSS 120
           GIT HAQDHLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ 
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           SPGL+NSSPYE+GW+IKV+ S   EL++LM  ++Y+KFCEEED+ H
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of Cla97C01G009760 vs. TAIR10
Match: AT2G35120.1 (Single hybrid motif superfamily protein)

HSP 1 Score: 251.9 bits (642), Expect = 2.5e-67
Identity = 125/156 (80.13%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIPHRGFASVV-KDLKYATSHEWVKVEGNKATVGITDHAQDHL 60
           MA RL WASR AS+LRIS+  RGF+SVV KDLKYA SHEWVK++GNKAT GITDHAQDHL
Sbjct: 1   MACRLFWASRVASHLRISVAQRGFSSVVLKDLKYADSHEWVKIDGNKATFGITDHAQDHL 60

Query: 61  GDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSSSPGLVNSSPY 120
           GDVVYVELP+VG SV Q  SFGAVESVKATSDINSPVSGK++EVNEEL+ SPGLVNSSPY
Sbjct: 61  GDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTESPGLVNSSPY 120

Query: 121 ENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           E GWIIKVE+SD+GE + LMDS++YSKFCEEED+KH
Sbjct: 121 EQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

[Close]

BLAST of Cla97C01G009760 vs. TAIR10
Match: AT1G32470.1 (Single hybrid motif superfamily protein)

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-48
Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRIS--------IP----HRGFASVVKDLKYATSHEWVKVEGNKAT 60
           MA R+ WAS  A+ L++S        +P     R F+SV++ LKYA SHEWVK EG+ AT
Sbjct: 1   MALRM-WASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVAT 60

Query: 61  VGITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELS 120
           +GITDHAQDHLG+VV+VELPE  +SV ++ SFGAVESVKATS+I SP+SG++IEVN +L+
Sbjct: 61  IGITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLT 120

Query: 121 SSPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
            SPGL+NSSPYE+GW+IKV+ S   EL+ LM  ++Y+KFCEEED+ H
Sbjct: 121 ESPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of Cla97C01G009760 vs. TAIR10
Match: AT2G35370.1 (glycine decarboxylase complex H)

HSP 1 Score: 187.6 bits (475), Expect = 5.9e-48
Identity = 98/166 (59.04%), Postives = 128/166 (77.11%), Query Frame = 0


Query: 1   MASRLVWASRAASYLRISIP-----------HRGFASVVKDLKYATSHEWVKVEGNKATV 60
           MA R+ WAS  A+ L++S              R F++V++ LKYA SHEWVK EG+ AT+
Sbjct: 1   MALRM-WASSTANALKLSSSVSKSHLSPFSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGDVVYVELPEVGTSVKQDGSFGAVESVKATSDINSPVSGKIIEVNEELSS 120
           GIT HAQDHLG+VV+VELPE  TSV ++ SFGAVESVKATS+I SP+SG+IIEVN++L+ 
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLVNSSPYENGWIIKVEVSDSGELKNLMDSEQYSKFCEEEDSKH 156
           SPGL+NSSPYE+GW+IKV+ S   EL++LM  ++Y+KFCEEED+ H
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

The following BLAST results are available for this feature:

BLAST of Cla97C01G009760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459025.1	2.0e-78	98.71	PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis melo]	[more]
XP_022142648.1	5.0e-77	95.48	glycine cleavage system H protein 2, mitochondrial [Momordica charantia]	[more]
XP_004145438.1	6.5e-77	97.42	PREDICTED: glycine cleavage system H protein 2, mitochondrial [Cucumis sativus] ...	[more]
XP_023001624.1	6.5e-77	95.48	glycine cleavage system H protein 2, mitochondrial-like isoform X1 [Cucurbita ma...	[more]
XP_022927059.1	5.5e-76	93.55	glycine cleavage system H protein 2, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of Cla97C01G009760 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C983\|A0A1S3C983_CUCME	1.3e-78	98.71	Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103498256 PE=3 S...	[more]
tr\|A0A0A0M3S2\|A0A0A0M3S2_CUCSA	4.3e-77	97.42	Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_1G701910 PE=...	[more]
tr\|A0A2I4HSD2\|A0A2I4HSD2_9ROSI	8.6e-70	87.10	Glycine cleavage system H protein OS=Juglans regia OX=51240 GN=LOC109020964 PE=3...	[more]
tr\|A0A2I4G0A6\|A0A2I4G0A6_9ROSI	1.1e-69	85.81	Glycine cleavage system H protein OS=Juglans regia OX=51240 GN=LOC109003585 PE=3...	[more]
tr\|A0A1Q3D2L6\|A0A1Q3D2L6_CEPFO	1.1e-69	84.52	Glycine cleavage system H protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]

BLAST of Cla97C01G009760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82179\|GCSH2_ARATH	4.6e-66	80.13	Glycine cleavage system H protein 2, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
sp\|P49359\|GCSH_FLAPR	7.8e-50	62.66	Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN...	[more]
sp\|Q39732\|GCSH_FLAAN	3.0e-49	61.96	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN...	[more]
sp\|Q9LQL0\|GCSH3_ARATH	3.6e-47	59.28	Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
sp\|P25855\|GCSH1_ARATH	1.1e-46	59.04	Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Cla97C01G009760 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35120.1	2.5e-67	80.13	Single hybrid motif superfamily protein	[more]
AT1G32470.1	2.0e-48	59.28	Single hybrid motif superfamily protein	[more]
AT2G35370.1	5.9e-48	59.04	glycine decarboxylase complex H	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0019464	glycine decarboxylation via glycine cleavage system

Vocabulary: **Cellular Component**
Term	Definition
GO:0005960	glycine cleavage complex

Vocabulary: **INTERPRO**
Term	Definition
IPR011053	Single_hybrid_motif
IPR000089	Biotin_lipoyl
IPR003016	2-oxoA_DH_lipoyl-BS
IPR002930	GCV_H
IPR033753	GCV_H/Fam206
IPR017453	GCV_H_sub

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019464	glycine decarboxylation via glycine cleavage system
biological_process	GO:0009750	response to fructose
biological_process	GO:0009749	response to glucose
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0005960	glycine cleavage complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G009760.1	Cla97C01G009760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017453	Glycine cleavage system H-protein, subgroup	TIGRFAM	TIGR00527	TIGR00527	coord: 28..152 e-value: 4.3E-52 score: 173.5
None	No IPR available	GENE3D	G3DSA:2.40.50.100		coord: 25..155 e-value: 1.5E-58 score: 198.1
None	No IPR available	PANTHER	PTHR11715:SF22	SUBFAMILY NOT NAMED	coord: 3..155
IPR033753	Glycine cleavage system H-protein/Simiate	PFAM	PF01597	GCV_H	coord: 31..150 e-value: 8.8E-50 score: 167.6
IPR033753	Glycine cleavage system H-protein/Simiate	CDD	cd06848	GCS_H	coord: 33..127 e-value: 2.68235E-50 score: 157.695
IPR002930	Glycine cleavage system H-protein	PANTHER	PTHR11715	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 3..155
IPR002930	Glycine cleavage system H-protein	HAMAP	MF_00272	GcvH	coord: 28..149 score: 39.78
IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	PROSITE	PS00189	LIPOYL	coord: 71..100
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 46..128 score: 30.311
IPR011053	Single hybrid motif	SUPERFAMILY	SSF51230	Single hybrid motif	coord: 27..150

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G009760	Cla004609	Watermelon (97103) v1	wmwmbB247
Cla97C01G009760	Csa1G701910	Cucumber (Chinese Long) v2	cuwmbB011
Cla97C01G009760	MELO3C021742	Melon (DHL92) v3.5.1	mewmbB141
Cla97C01G009760	ClCG01G009540	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G009760	CSPI01G34390	Wild cucumber (PI 183967)	cpiwmbB011
Cla97C01G009760	Cucsa.332790	Cucumber (Gy14) v1	cgywmbB574
Cla97C01G009760	CmaCh13G004250	Cucurbita maxima (Rimu)	cmawmbB213
Cla97C01G009760	CmoCh13G004560	Cucurbita moschata (Rifu)	cmowmbB195
Cla97C01G009760	Lsi02G010550	Bottle gourd (USVL1VR-Ls)	lsiwmbB153
Cla97C01G009760	CsGy1G032860	Cucumber (Gy14) v2	cgybwmbB011
Cla97C01G009760	MELO3C021742.2	Melon (DHL92) v3.6.1	medwmbB131
Cla97C01G009760	CsaV3_1G046250	Cucumber (Chinese Long) v3	cucwmbB010
Cla97C01G009760	Bhi08G000720	Wax gourd	wgowmbB458

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G009760	Silver-seed gourd	carwmbB0121
Cla97C01G009760	Cucurbita maxima (Rimu)	cmawmbB394
Cla97C01G009760	Cucurbita moschata (Rifu)	cmowmbB200
Cla97C01G009760	Cucurbita moschata (Rifu)	cmowmbB377