MELO3C021598 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021598
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pre-rRNA-processing protein esf2
Location	chr9 : 4304612 .. 4310380 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAGGAGGAGAGTTCTGAAGTTAATTTAACAACTGACTGCAACCCAGAATCTAGTAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAAGAAGCAGTTATTGATGAAAGGTGTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGCTGGGGGAAAGCAACATAAACTCTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAAAAGAGTACTCAACAACGTATAGAGGAGAGCTCTATCAAGGATGAGGCAGGAGAATATGAAAATAGAACAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAAATTTTTTCGAGAAGAGGACAATTGCTTTGGAAGATGCTGAGAATGAAAGGACTGACAACATACTTAGAGAAAAATCTGATAGGAAGATTCTAGAGTCCGACAATGGAAAAGTTGATCGAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGGTAATGAGTAATTATGCATAACATTTATTTTTTCTATTAGTTTCCTGTTGCTTCAAAATCTTACTTGTCTATTTGTTCTCCCTTTTGTTCCATTGCTGCCATTTTGTTTAGAATCTACTTTTTTTCTAGTGTATTTTTTCAAGGTAATCTATCTTTCGTGTTCAGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCCGAAGGGTAAACTCACACGCCTAGCTAATTTTTTTATTTTCTAATTGTTTGTGTTCCAACCTTCAAGTGACTAATAATAATAACAAAAGTAATAAAGAACAATGCTTGGCTTCTCAAATGATTTGGTTTTAGTTACTGATTTTGTATTGTCCTTATATGTACTATGCAGATGGGTTGAATTTACTGATAAAAGAGTCGCCAAGAAGGTGGCTAATATGTTAAATGGCGAACCAATAGGTAAACTTTTATTTAAATATACATGTTTTGTATTTGATATCCTGGTTCGATTTATGATTTTTACTCTCTTTGGGAGATGGTGGAATTCATTGTATATGGCTGGTCTTTCGGGTTTCATCCCTCTGTGTCAAATCGGGAAGCGATAGGCATGGCCTCTTCTTTCTTTACTTGAGGACCATCACGGTGGGTATGGGAGAAGGGATGTAAGAGTTTGGAGTCTCAGTCCACTGGTGGGATTCTTGTGTAAGTCGCCCTTCCAAAATATGAGTGACCCTTTCCTTCTCCTAGGTGAGTCATTCTTTGGAGGATTAAGATCCTAGAAAAAAATGAGGTTTTTTACTTGGCAAGTTTTACATACCCTCAGCAATATGATGGATTAACTTGTGAGGAAGTTGCCGTCTTTTGTTGTATCTTTTTGATGTATCCTTTGTAGGAAGGTAGAGGAAGATCTGGACCGTACTCTCTGTCATCTTGAGTTTGCGAGCTTCTTTTGGGACTTTTCTATCCAGATGTTTGGTTTTTTGTATGGGCAGTTCATTGACAACGTGATTGGGAAGTTCAACTTTCTCTTCAGGAGAATGGTCAACTTTTATGGCATGTTGAGTTGTGTGTGATCTTCTAAGTTTTGTGAGGGGGAGTGGAATAGTAGGATGTTTAGAGGTGGAAAGAAACCCTAGTGAGGATATTTATATATGGACTTCAATTTCGAAAACCTTTTGTAATTATTCTATAGACACTATTTTGCATAATTGGAGTCCCTTTCTATGAAGGATCTTTTATGGGCTTGGTTTCGTATCTTCTTGTATTCCTTCATTTTCTCTCTATAAAAGTTGTGTTTCCCTACCTGTTGTGCATGGGTTTAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGGTACACACCTCAAAAACTTGGTCTTGCCCTATTTTTGCTTACAAGTTACAACACTGTTACTGATATCAAACACTTTACAATTTGCAGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTCCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGGTAATCGAAGAGCCTTACTGGCTTACATCACTACACTATCTCAGTATGTATTTGGACGTTTTGGGGATCCGGAACTTTAACTGCAGTTGATTTTTCTCATCGTATTGTTGTACTTGTATGTGTGTTGTCCCCGTTTTGAAAATATAAAATTTACCCTCTTTTTATATGGCCTACAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGATTCGCAGCTTTCCACAAACACAACCAGTTGCAGATGTTGCCGTACAAAACAAACAAAGACTATCTACAAATGTCCTGGCTAGGGTAAGTAATAACGTTTCATTTACAATCAAACTTCATCTCATGATTTACCCCAAGTTACTAGATTTTAACTTGTAAACTTTTATCCAGGTTGAGTTCGGTATGATTATTAAAATGGTAAAAAGTGATTCTTAGCTTTGGATAGTTACACGTGTAAATGTGTAATTTTGAAATTTTTAGAAATTTTTAGCAAATAGTGTTGTTGAACGGTAGAAAAGAGAACACAAGGTTTACATGGAAAACCCTAGAACAGGGAAAAAACCACTATAGAAATTAGGGGAAAAAAACCACTATAAAGAGTTTCTTTTTATCATTTTCACACAAGAAAATTGACAATTTCCTTTTTTATATTATATTTTATTGTATTGGTCGTATTATATTTGCCAAATTTATTTTTTCCTTCTATGTAATGCGTTGTTCTTCTATTTAAGAAAATCCTTCTCTCTTTGTGAAATACAAGAAATATATTATTTTGGCAGAAAGTTACTCGAGGACAACTTTATAGGCTCTCGCAAGCCCTAATACAGAAAGGAAATAAACTTAGGGTAAAGTAAAATAGTAAAATATCCCCGGGCTATAAGCTATCAAAAAAGTCTCTTATTTCCAACACTCCCTCTCAAGTTGGGTAGATTTTAATCATACCCAATTTGCTAATACATGAGTCAAAACTCAGCATGAGTAATCCTTTGGTGAGAACATCAACTACTTTGTTGACTAAATGGAATATACGAAATACAAATACTTTGTCCAGTTTATCTTTTATAAAATGTCTGCCAATCTCCACATGTTTTGTTCTATCATGTCGTACAAGATTATTGGCTATGGTTATAGTTGCTTTATTATCACAATAGAGCTTTAGAGGTAAAACACAGTCTTGGTGAAGATCAGACGAAACTTTCTTCAGTCAGATTTCTTCAAATTTCCAAACTTATAGCTCTGGATTCAGCTTCAGCACTATATCTAGCAACAACAATTTGCTTCTTACTTCTCCAAGTAACTAGGTTATTCACACAAACGTACAATACCTAGAGGAAGATTTTCTGTCAATAACTTATCTTTCCCAATCAGAATCAATATAAGTCTCGAGGCATTTTCTGTCAATTTTTCTAAACATCGGACCTTTACCCTCGGAGCTTTTCAAATATCTCATAAGCTGATTCACAACTTGCATACATTCATTCTAGGGTGCCTGTAGATACTAACTAACAACACTGACAACACAGGAAATATCTGGTCTAGTGTGGCCAATTCACTCCTAAGACTCTGACCAGCGTTGGGCTTGTCATTTGGAGGGTGTCTTTTGCCATTTTGTGGTCTACCATGTAACTTCAATCATTGTTAATTTGTATGCCCGGGTTTCTGTTCACACACTGGGTCTGTTTCCTATTTTGCTTGTCACTATCAAAACCATATAGTTTCGCACTAAAAGTAGCAGAATCAATAGCAGATCTAGTCATGATGTTATAGCAGTGCTACATCTTCCTTTAGACGCACCGTAGAACACATTTCCATAAGAGAGGGTATAGGCTTCTATCCCATACGACCTCATACTACATCGAAATTGGACTTAAATCCATCTCCTGCAAGATCAGGAACAATTTGTTAAAGTATGAAGTGACATCTATCTTCCCTTATTTGCAGTCATGTGCCTCTTTACGCAGTATGTAAAGACTAGACACATTTTGTCTTTTAGAATATAACTTTTGAAATGCATCCTAGATATCTTGAGCAGCCGCAACATACAACAACGATTTCCCCATCTGAAGTTTCATACTACTAATTAGTAGTGATTCTAGCAGGGAGTCTTCTCCTTTCCAAATGTACTCTTGAGGATCTCTTAGTCTATGTCTTGGCATCTCACTAGTTAGATACCCAAAATTATGACGCCTCTCAAAGACCATTTTAATGAATTGAAACTAGGAGAAATAATTCTGACCATTCAACTTTTTTCCTGCAATTAACCTCGTGGAATTTTCCATTGAGCTAGACAAATAGTTTGTAGTAGTTAAAGTTGGGAAAGAGGTTACCGTATTCTCTAGTACATCAGTAAATCGAAAGGAATGTCAAAATTCATTACATTGGAATTTAGGTTTGTGGAAGCACCTAGTAACTCAAAAGCAACAATTTGTTGTTGCGTTGTTAACGGGGACAAACTAATCAAACCTTGATGTTCAGAACTAGGCAACACATGATGAGGAAGACCCTGTTGCCGCAACATGGAATTTACCTGTGTGGTAGTAGGTGGACGACTCACTAATCTCGGATTCATGGTGTATGTTTGAGCCAATGTTTTCATCAAAGGGTTGTGGTGGTGCTAGAATTGGACGGATATGCAAGGATTAAAGATAACAATCAACAACAATGAGAGTGACGGTAGTGAAAAAATTAGTGGCTTTGGCGATTTTGGCGGTGGCAGCAACGGCAACTGTGGCTAAAGCAAAACTGGTGTAGAATTAAGGTTATCTTGCATATGTTGGTTTTCGCTAACGGTGGCTAGGGTTTCATCACCATTTTTTAATACCAAGTTGCATGGTGGAATAGAGAACACAAGGTTTGTGTGGAAAACTCCGATAGTCTTTCTTTATTGTTTTCACATACAATGAAAATTGCAAGAGAAGATAACTTTAAAGGCACTAACAAGCCTTAATACAAAAAAGAAAATAAACTTAGGGTAAAGTAAAATACTTCCTGGAGCTAGACTTCAACAAAAACCCTTATTTTCAACCCCTTATTTTCAACAAGTGCATTAGGATTCTCGTAGGAACAAAACGCATAGAGAACAATATTGCAATATCAGTCGATTAATATTACAATACCAATGGCCTTTGGAGAGGGCAGGACAATACCCAAAACTATACATTCCTCCGAAGTGCCCAACCTTTCTAATTTCTAACGAAGGCACTACTAACCTTTTTTTTGGGAGACACACCTAACTAATATTATAACTATCCTACTAATATTCGAAATATATCCTTCCTAGTACTCTGTTTTTTCTTTAATTGGAAGCATACAAGTTCTTTGTTCAAAAATATTTTATCTAAAAGCATTTCAAACTCACTAAATGATAACTTTGGCTATCTGCAACACATCTTTTGTTCATAAAATTTGATTGGATTGTTGCATTTTGACTTATTATTTATACATGTTATAACCAAGGTCTTGGCTTTCATTACCGCTTCTGCAGGTGTTTGGAAGCTCCTAG

mRNA sequence

ATGTCCAAGGAGGAGAGTTCTGAAGTTAATTTAACAACTGACTGCAACCCAGAATCTAGTAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAAGAAGCAGTTATTGATGAAAGGTGTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGCTGGGGGAAAGCAACATAAACTCTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAAAAGAGTACTCAACAACGTATAGAGGAGAGCTCTATCAAGGATGAGGCAGGAGAATATGAAAATAGAACAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAAATTTTTTCGAGAAGAGGACAATTGCTTTGGAAGATGCTGAGAATGAAAGGACTGACAACATACTTAGAGAAAAATCTGATAGGAAGATTCTAGAGTCCGACAATGGAAAAGTTGATCGAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCCGAAGGATGGGTTGAATTTACTGATAAAAGAGTCGCCAAGAAGGTGGCTAATATGTTAAATGGCGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTCCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGATTCGCAGCTTTCCACAAACACAACCAGTTGCAGATGTTGCCGTACAAAACAAACAAAGACTATCTACAAATGTCCTGGCTAGGGTGTTTGGAAGCTCCTAG

Coding sequence (CDS)

ATGTCCAAGGAGGAGAGTTCTGAAGTTAATTTAACAACTGACTGCAACCCAGAATCTAGTAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAAGAAGCAGTTATTGATGAAAGGTGTAGATGTCATGGAAATGAAAGATGTAAGATCTGTTCAGCTGGGGGAAAGCAACATAAACTCTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAGAAAAAAGAGTACTCAACAACGTATAGAGGAGAGCTCTATCAAGGATGAGGCAGGAGAATATGAAAATAGAACAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAAATTTTTTCGAGAAGAGGACAATTGCTTTGGAAGATGCTGAGAATGAAAGGACTGACAACATACTTAGAGAAAAATCTGATAGGAAGATTCTAGAGTCCGACAATGGAAAAGTTGATCGAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCAAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCGCACATGGATCCTTTGAGACTTCGTCAGATCCTCTCACAATATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCCGAAGGATGGGTTGAATTTACTGATAAAAGAGTCGCCAAGAAGGTGGCTAATATGTTAAATGGCGAACCAATAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTCCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGGCTAAAGAAGAAGCAGAAGTTGCGAGAAGATTCAGAAATGAATTCTCTTGATGATAGCCAGAAACTTCCAAAGTTGATTCGCAGCTTTCCACAAACACAACCAGTTGCAGATGTTGCCGTACAAAACAAACAAAGACTATCTACAAATGTCCTGGCTAGGGTGTTTGGAAGCTCCTAG

Protein sequence

MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLARVFGSS*

Homology

[Close]

BLAST of MELO3C021598 vs. Swiss-Prot
Match: ESF2_SCHPO (Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=esf2 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.9e-43
Identity = 110/331 (33.23%), Postives = 171/331 (51.66%), Query Frame = 1


Query: 58  NSDSDKVKKKKKRKKSTQQRIEESSIKDE--AGEYENRTETFMKEASPVSNSGSENFFEK 117
           + + ++  K  +  +ST+  ++   +K E  A E E R        + +     ++ FE 
Sbjct: 24  DEEDERFLKAIRSSRSTKPVVDVLKVKSESSADELEERD-------AHLDRFRRDSTFES 83

Query: 118 RTIALED----AENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGI 177
            T   ED    +ENE  +   +  +  K +  +  +  R+ IKR              G+
Sbjct: 84  ETSDHEDFSGGSENELDEETTKNANSIKKISLEEVEKQRKAIKRS-------------GV 143

Query: 178 CYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFT 237
            YLSR+PP+M P +LRQILSQYG+I R+YL PE +A + QR R GG +   + EGW+EF 
Sbjct: 144 IYLSRIPPYMAPNKLRQILSQYGKIGRVYLTPESSAKRAQRLRNGGNKRVMYEEGWIEFE 203

Query: 238 DKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLAL 297
            KRVAK VA +LN   IGG+K S ++ D+WN+KYL KFKW  LTE+ A ++A RE +L +
Sbjct: 204 SKRVAKSVAELLNTNQIGGKKSSWYHDDIWNMKYLPKFKWHHLTEQIAAENAARESRLKV 263

Query: 298 EISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEM----NSLDDSQKLPKLIRS 357
           EI   +++   Y+  V+ ++ +  I ++  ++  L   +E       L +  K  K  R 
Sbjct: 264 EIEQGRKQLKQYMRNVENAKMIEGIRKKRSERDTLNVSTEFPEETKDLSEDTKPSKQARR 323

Query: 358 FPQTQPVA---DVAVQN-KQRLSTNVLARVF 375
           F   + +    ++   N KQ+   NVL RVF
Sbjct: 324 FFGQKSIVSNRNMPTDNAKQQKVENVLRRVF 334

[Close]

BLAST of MELO3C021598 vs. Swiss-Prot
Match: ESF2_PICST (Pre-rRNA-processing protein ESF2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=ESF2 PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-41
Identity = 106/325 (32.62%), Postives = 178/325 (54.77%), Query Frame = 1


Query: 50  VQLGESNINSDSDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGS 109
           VQ     +  D D+ + ++   +  +   ++   +D+A  +EN  E  + +   +   G 
Sbjct: 45  VQRIRDKLYQDEDEDEDEQVDDEDEEDEEDKEDEEDDADNFENENEEEVDDY--IDGDGM 104

Query: 110 ENFFEKRTIALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMR 169
            NF    +I + D ++          S+RK     NGK+   K    +QL KE       
Sbjct: 105 RNFDMGESIEVGDVDST---------SERK-----NGKI---KKLTSRQLQKEQKRIKRT 164

Query: 170 GICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVE 229
           G+CYLSR+PP+M P  LR ILS++G+I R++L PED+A   +R + GG + + F+EGWVE
Sbjct: 165 GVCYLSRIPPYMKPATLRSILSRFGKIDRLFLKPEDSAIYHKRVKYGGNKKKNFTEGWVE 224

Query: 230 FTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKL 289
           F +K+ AK  A+ LN   +GGRK S +Y D+ N+KYLS FKW DLT++ A ++ +R+ KL
Sbjct: 225 FVNKKDAKMCASTLNANKLGGRKTSYYYDDVINMKYLSGFKWFDLTQQIAKENEVRQAKL 284

Query: 290 ALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFP 349
           +LE+S  ++   +++  V+KS+ +++I+   K+K++  E    + +  S K  K+  +  
Sbjct: 285 SLELSQQQKLNKTFVNNVEKSKLVSTIQR--KRKERDPEHESDSHIRRSFKQRKVTSTRA 344

Query: 350 QTQPVADVAVQNKQRLSTNVLARVF 375
                     Q  ++LS +VL++VF
Sbjct: 345 DADEELKARAQPDRKLS-DVLSKVF 347

[Close]

BLAST of MELO3C021598 vs. Swiss-Prot
Match: ESF2_GIBZE (Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ESF2 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.2e-41
Identity = 101/278 (36.33%), Postives = 156/278 (56.12%), Query Frame = 1


Query: 100 EASPVSNSGSENFFEKRTIALEDAENERTDNILREKSDRKILESDNGKV-DRRKIKRKKQ 159
           E  P S+ GS++  E      +  + E       EK  RK  ++ + ++ D  +   KK 
Sbjct: 47  EDDPGSDIGSDDEDEATEKDSKKTQEEDKKEDQPEKPKRKSKDTTSTELPDVTRTLTKKN 106

Query: 160 LLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGF 219
           L+   A     G+ YLSR+PP M P +LR +L  YG I RI+LAPED AS  +R RAGG 
Sbjct: 107 LVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGTINRIFLAPEDPASHARRVRAGGN 166

Query: 220 RGQFFSEGWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEET 279
           + + ++EGWVEFT K+ AK V ++LN   IGG+K S ++ DLWN+ YL  FKW +LTE+ 
Sbjct: 167 KKRSYTEGWVEFTKKKDAKAVCDLLNARTIGGKKGSYYHDDLWNLLYLKGFKWHNLTEQI 226

Query: 280 AYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDS 339
           A ++A R  ++  EIS + +E   ++  V+K++ L+ +  + K K++  E       D+S
Sbjct: 227 AAENAERSSRMRAEISKSTKENKEFVRNVEKAKMLDGMAVKAKAKKRKAETHTEGQEDES 286

Query: 340 QKLPKLIRSFPQTQPVADVAVQNKQRLS--TNVLARVF 375
            +  K  RSF Q  P+A   +  + + +  T VL+++F
Sbjct: 287 VRQVK--RSFKQV-PLAKKKMDGEDQPAEVTRVLSKIF 321

[Close]

BLAST of MELO3C021598 vs. Swiss-Prot
Match: ESF2_DEBHA (Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ESF2 PE=3 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 4.2e-41
Identity = 93/293 (31.74%), Postives = 169/293 (57.68%), Query Frame = 1


Query: 85  DEAGEYENRTETFMKEASPVSNSGSENFFEKRTIALEDAENERTDNILREKSDRKILESD 144
           DE  + + +     K+AS + N  +E   ++  +  ED +     +I+ E++     ++ 
Sbjct: 14  DEEDDEDEKVFNISKKASHIDNFKNEESEDEEDLNEEDDDLFMNTDIIDEETIENSKQAK 73

Query: 145 NGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPE 204
           N  ++ +K+   +QL KE       G+CYLS++PP+M P +LR +LS++G+I R++L PE
Sbjct: 74  N--INLKKLT-PEQLAKEQKKIKKTGVCYLSKIPPYMKPAKLRSVLSRFGKIDRLFLKPE 133

Query: 205 DAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIK 264
           D ++  +R + GG + + ++ GWVEF +K+ AK  A  LNG  +GG+K S +Y D+ NIK
Sbjct: 134 DNSTYTKRVKYGGNKKKNYTAGWVEFINKKDAKLCAGTLNGNKLGGKKSSYYYDDIINIK 193

Query: 265 YLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQ 324
           YLS FKW DLT++ A ++ IR+ KL++E+S  ++   S++  V+KS+ +N+++ + K +Q
Sbjct: 194 YLSAFKWFDLTQQIAKENEIRQAKLSMELSQQQKLNKSFINNVEKSKMINNMQNKRKARQ 253

Query: 325 KLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQNKQRLS---TNVLARVF 375
                   N  +   +     R    T+  A+  +++K + +    +VL++VF
Sbjct: 254 AESGADNSNKEESDIRRNLKQRKLASTRADAEDELKHKSKPNEKLNDVLSKVF 303

[Close]

BLAST of MELO3C021598 vs. Swiss-Prot
Match: ESF2_CANAL (Pre-rRNA-processing protein ESF2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ESF2 PE=3 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 5.5e-41
Identity = 101/277 (36.46%), Postives = 157/277 (56.68%), Query Frame = 1


Query: 58  NSDSDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRT 117
           N+  DKV   K  K S+      S  +D + + E++ E    +       G  NF +   
Sbjct: 17  NNFQDKVFNVKS-KTSSFFHANTSDNEDFSEDEEDKDEQDEGDTKTKPKDGKHNFED--- 76

Query: 118 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKR--KKQLLKEAANADMRGICYLS 177
           IA ++   E  +NI  ++     L  D G    +K+K+   K+L KE       G+CYLS
Sbjct: 77  IAYDE---ESEENIGDDEDGNADLSLDGGSKVNKKLKKLTSKELAKEQKRIKRTGVCYLS 136

Query: 178 RVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRV 237
           RVPP+M P +LR +LS++GEI R++L PED +   +R + GG + + F+EGW+EF +K  
Sbjct: 137 RVPPYMKPAKLRSVLSRFGEIDRLFLKPEDPSVYHKRVKYGGNKKKNFTEGWIEFVNKSD 196

Query: 238 AKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISA 297
           AK  A  LNG  +GG+K S +Y D+ NIKYL  FKW DLT++ A ++ +R+ KLA+EIS 
Sbjct: 197 AKLCAATLNGNKLGGKKTSYYYDDIINIKYLPGFKWLDLTQQIAKENEVRQAKLAMEISQ 256

Query: 298 AKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEM 333
            ++   S+++ V+KS+ + +I+    KK+K  +D  +
Sbjct: 257 QQKLNKSFVSNVEKSKMIANIQ----KKRKTTDDDNI 282

[Close]

BLAST of MELO3C021598 vs. TrEMBL
Match: A0A0A0KUC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517890 PE=4 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 3.2e-189
Identity = 349/381 (91.60%), Postives = 362/381 (95.01%), Query Frame = 1


Query: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD 60
           MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+D
Sbjct: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTD 60

Query: 61  SDKVKKKKK---RKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRT 120
           SDKVKKKKK   RKKSTQQR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR 
Sbjct: 61  SDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120

Query: 121 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 180
           IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRV
Sbjct: 121 IALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRV 180

Query: 181 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240
           PPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK
Sbjct: 181 PPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240

Query: 241 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 300
           +VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Sbjct: 241 RVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 300

Query: 301 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 360
           RERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD
Sbjct: 301 RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVAD 360

Query: 361 VAVQNKQRLSTNVLARVFGSS 378
            AVQNK RLSTNVLA VFGSS
Sbjct: 361 FAVQNKPRLSTNVLAGVFGSS 380

[Close]

BLAST of MELO3C021598 vs. TrEMBL
Match: D7SH86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g00140 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 9.0e-91
Identity = 179/261 (68.58%), Postives = 211/261 (80.84%), Query Frame = 1


Query: 118 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 177
           +A E+ E +RT +     S+    E ++ K   RK K KK+LLKEA+ AD RG+CYLSR+
Sbjct: 88  MAEEEQEIKRTSH-----SEEGESEGNDEKGRIRKNKLKKRLLKEASKADKRGVCYLSRI 147

Query: 178 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 237
           PPHMD ++LR ILSQYGEIQRIYLAPED A+QV RKRAGGFRGQ FSEGWVEFT K VAK
Sbjct: 148 PPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKKTVAK 207

Query: 238 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 297
           +VA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEE AYK+AIREQKLALE+SAAK
Sbjct: 208 RVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALELSAAK 267

Query: 298 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 357
           RERD YL+KVDKSRAL+SIEERLKKKQK+++D+  N+    + + PK+IR FPQ  P+AD
Sbjct: 268 RERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKPPLAD 327

Query: 358 VAVQNKQRLSTNVLARVFGSS 378
            A ++K RLS ++LA VFG S
Sbjct: 328 KAAESKPRLSKDILAGVFGGS 343

[Close]

BLAST of MELO3C021598 vs. TrEMBL
Match: W9QHA4_9ROSA (Pre-rRNA-processing protein esf2 OS=Morus notabilis GN=L484_002507 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 194/358 (54.19%), Postives = 250/358 (69.83%), Query Frame = 1


Query: 16  NPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSDSDKVKKKKKRKKSTQ 75
           N E +K   + +  KKKQLL +  + ME +D       ++ ++  S +  KK+K +K+  
Sbjct: 9   NNEKAKPDKEKKIKKKKQLLKEDAE-MEEQD-------QNQLHKTSSQKSKKRKEEKAKC 68

Query: 76  QRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIALEDAENERTDNILREK 135
           + ++E   K+E    EN               G +N  ++  +A  D   +++   L E 
Sbjct: 69  KSLKEEMEKEE----ENGA------------GGEKNQSQEAVLAAIDEGKKKS---LEE- 128

Query: 136 SDRKILESDNGKVDRRKI-KRKKQLLKEAANADMRGICYLSRVPPHMDPLRLRQILSQYG 195
                 E+D+ K D +KI KRK++LLKEAA A+ RGICYLSRVPPHMDP +LRQ+LSQYG
Sbjct: 129 ------EADDEKTDMKKINKRKRRLLKEAAMANKRGICYLSRVPPHMDPFKLRQLLSQYG 188

Query: 196 EIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVANMLNGEPIGGRKRS 255
           EIQRIYL PE +A +  RKRAG F+ Q FSEGW EF+DKR+AK+ ANMLNGE IGGRKRS
Sbjct: 189 EIQRIYLVPEKSAGKAPRKRAGRFQEQGFSEGWAEFSDKRIAKRAANMLNGEQIGGRKRS 248

Query: 256 SFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERDSYLAKVDKSRALN 315
           SFYYDLWNIKYLSKFKWDDLTEE AY +A REQKLALEISAAKRERD YL+KVD++RAL+
Sbjct: 249 SFYYDLWNIKYLSKFKWDDLTEEIAYNNAAREQKLALEISAAKRERDFYLSKVDQARALS 308

Query: 316 SIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLA 372
           SIE+RLKKKQKL+E++E N+ L  SQ+ PK++R F Q QPVAD    +K+RLS ++LA
Sbjct: 309 SIEKRLKKKQKLQEEAETNADLPVSQQSPKVVRKFQQKQPVADNTTVSKRRLSKDILA 332

[Close]

BLAST of MELO3C021598 vs. TrEMBL
Match: V4U1X3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015979mg PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 9.9e-90
Identity = 187/330 (56.67%), Postives = 238/330 (72.12%), Query Frame = 1


Query: 52  LGESNINSDSDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSEN 111
           +GE   N  S +  ++K+RKK     ++E+   DE  E  +R E  +K  S V   G  +
Sbjct: 1   MGEKG-NPKSCERSERKQRKKKENFFVKETGKTDEEEEEASRVENNLK--SNVEEIGEAD 60

Query: 112 FFEKRTIALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGI 171
              K          E+  N++ E    ++ E ++      K K+K++LL+EAA AD RGI
Sbjct: 61  MIGK----------EKEVNLMEEGKQEELNEKNS---KHSKSKKKQRLLEEAAKADQRGI 120

Query: 172 CYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQV-----QRKRAGGFRGQFFSEG 231
           CYLSR+PPHMDP++LRQILSQYGEIQRIYLAPED +++V      RKR GGF+ Q FSEG
Sbjct: 121 CYLSRIPPHMDPVKLRQILSQYGEIQRIYLAPEDPSTRVLRKRENRKRDGGFQDQGFSEG 180

Query: 232 WVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIRE 291
           WVEFT K VAK+VANMLNGE IGG+KRSSFYYDLWNIKYLSKFKWDDLT E AYK+A+RE
Sbjct: 181 WVEFTKKGVAKRVANMLNGEQIGGKKRSSFYYDLWNIKYLSKFKWDDLTAEIAYKNAVRE 240

Query: 292 QKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMN-SLDDSQKLPKLI 351
           Q+LALEISAAKRERD YL+KVDKSRAL+SIEERLKKKQK++++S+ +  L  S+++ K+I
Sbjct: 241 QRLALEISAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQESQTHPELPGSEQVTKVI 300

Query: 352 RSFPQTQPVADVAVQNKQRLSTNVLARVFG 376
           R FPQ +PVA+ A  +K RLS ++LA VFG
Sbjct: 301 RHFPQKKPVAENAAPSKPRLSKDILAGVFG 314

[Close]

BLAST of MELO3C021598 vs. TrEMBL
Match: A0A067LGC0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10228 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.9e-89
Identity = 192/398 (48.24%), Postives = 270/398 (67.84%), Query Frame = 1


Query: 1   MSKEESSEVNLTTDCN---PESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNI 60
           M+KEE+ E+N  +  N   P S+++R +SRKNKKK+ L   V   + ++V       +  
Sbjct: 1   MAKEEN-EINGLSSQNEGYPNSTEERVRSRKNKKKRQLQDSVKTEDEQEVNG-DSDSTEE 60

Query: 61  NSDSDKVKKKKKRKKSTQQRIEESSIKDEAGE----------YENRTETFMKEAS---PV 120
           NS S  ++ + ++KK+  + +E++   +E+ +           +NR +  ++E +    +
Sbjct: 61  NSQSGDIRVESRKKKTKNKFLEKTGTSEESCKKSGGGRKKKGKKNREKQLLQEIAEDEEL 120

Query: 121 SNSGSENFFEKRTIALEDAENERTDNILREKSDRKILESDNG----KVDRRKIKRKKQLL 180
            ++ +E F E    A E  + +  + +  E ++ +  + DNG    K + R  K+KK LL
Sbjct: 121 QDANTEGFQEDVYPAAEGGKIDEENLLSNEITEGEDEQEDNGIKPVKENHRLKKKKKHLL 180

Query: 181 KEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAP--EDAASQVQRKRAGGF 240
           KEAA A+ RG+CYLSR+PP M+ + LRQ+LSQYGEIQRIYL P  +  A+QV+RK+  GF
Sbjct: 181 KEAAKAENRGVCYLSRIPPGMNDVILRQMLSQYGEIQRIYLVPKAKGPAAQVRRKKVDGF 240

Query: 241 RGQFFSEGWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEET 300
           R Q FSEGWVEF +K VAK+VA+MLNGE IGGRKRS FYYDLWNIKYL+KFKWDDLTEE 
Sbjct: 241 RDQEFSEGWVEFANKIVAKRVASMLNGEQIGGRKRSKFYYDLWNIKYLTKFKWDDLTEEI 300

Query: 301 AYKHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDS 360
           AYK A+REQKLALE+SAAKRERD YL KVD+S AL+SIEERLKKKQK+++D+    +   
Sbjct: 301 AYKSAVREQKLALELSAAKRERDFYLNKVDQSHALSSIEERLKKKQKIQQDAG-GQVTVI 360

Query: 361 QKLPKLIRSFPQTQPVADVAVQNKQRLSTNVLARVFGS 377
           +++PK+IR FPQ +PVA+ A + K  LS ++LA VFG+
Sbjct: 361 ERVPKVIRQFPQIKPVANKAEERKSHLSKDILAGVFGA 395

[Close]

BLAST of MELO3C021598 vs. TAIR10
Match: AT3G56510.1 (AT3G56510.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-82
Identity = 152/256 (59.38%), Postives = 194/256 (75.78%), Query Frame = 1


Query: 122 DAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPHM 181
           +  +E TD I  EK  ++ ++S   K DR+K K K++LLKEA+ AD RG+CYLSR+PPHM
Sbjct: 4   EESHELTDGISEEKESKETMKSQ--KADRKKKKLKEKLLKEASKADNRGVCYLSRIPPHM 63

Query: 182 DPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVAN 241
           D +RLR IL+QYGE+ RIYLAPED+ +QV RKRAGGFRGQ FSEGWVEF  K VAK+VA+
Sbjct: 64  DHVRLRHILAQYGELGRIYLAPEDSEAQVHRKRAGGFRGQRFSEGWVEFAKKSVAKRVAD 123

Query: 242 MLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRERD 301
           MLNGE IGG+K+SS YYD+WNIKYL+KFKWDDLTEE AYK AIREQKL + +SAAKRE+D
Sbjct: 124 MLNGEQIGGKKKSSVYYDIWNIKYLTKFKWDDLTEEIAYKSAIREQKLNMVLSAAKREKD 183

Query: 302 SYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQN 361
            YL+K++KSRA+  I+ R++KK+K++E+S  N+       P+ I  F Q + + +   Q+
Sbjct: 184 FYLSKIEKSRAMTEIDARMEKKRKIQEESGSNAEAAPVFPPRAIFQFRQKKSIENETSQS 243

Query: 362 KQRLSTNVLARVFGSS 378
           K  LST+ LA VFG S
Sbjct: 244 KPGLSTDFLASVFGGS 257

[Close]

BLAST of MELO3C021598 vs. NCBI nr
Match: gi|659117889|ref|XP_008458840.1| (PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo])

HSP 1 Score: 735.7 bits (1898), Expect = 4.0e-209
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 1


Query: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD 60
           MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD
Sbjct: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD 60

Query: 61  SDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIAL 120
           SDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIAL
Sbjct: 61  SDKVKKKKKRKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRTIAL 120

Query: 121 EDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPH 180
           EDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPH
Sbjct: 121 EDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRVPPH 180

Query: 181 MDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240
           MDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA
Sbjct: 181 MDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKKVA 240

Query: 241 NMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300
           NMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER
Sbjct: 241 NMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKRER 300

Query: 301 DSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQ 360
           DSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQ
Sbjct: 301 DSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLDDSQKLPKLIRSFPQTQPVADVAVQ 360

Query: 361 NKQRLSTNVLARVFGSS 378
           NKQRLSTNVLARVFGSS
Sbjct: 361 NKQRLSTNVLARVFGSS 377

[Close]

BLAST of MELO3C021598 vs. NCBI nr
Match: gi|449450052|ref|XP_004142778.1| (PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis sativus])

HSP 1 Score: 669.1 bits (1725), Expect = 4.6e-189
Identity = 349/381 (91.60%), Postives = 362/381 (95.01%), Query Frame = 1


Query: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNINSD 60
           MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+N+D
Sbjct: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTD 60

Query: 61  SDKVKKKKK---RKKSTQQRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRT 120
           SDKVKKKKK   RKKSTQQR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR 
Sbjct: 61  SDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120

Query: 121 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 180
           IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRV
Sbjct: 121 IALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRV 180

Query: 181 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240
           PPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK
Sbjct: 181 PPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240

Query: 241 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 300
           +VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK
Sbjct: 241 RVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 300

Query: 301 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 360
           RERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD
Sbjct: 301 RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVAD 360

Query: 361 VAVQNKQRLSTNVLARVFGSS 378
            AVQNK RLSTNVLA VFGSS
Sbjct: 361 FAVQNKPRLSTNVLAGVFGSS 380

[Close]

BLAST of MELO3C021598 vs. NCBI nr
Match: gi|702465051|ref|XP_010029078.1| (PREDICTED: pre-rRNA-processing protein ESF2 [Eucalyptus grandis])

HSP 1 Score: 345.9 bits (886), Expect = 8.9e-92
Identity = 196/338 (57.99%), Postives = 235/338 (69.53%), Query Frame = 1


Query: 62  DKVKKKKKRKKSTQQRIE--------ESSIKDEAGEYENRTETFMKEASPVSN------- 121
           D   KK++R+K+ ++ IE        E+  + E      R E  ++EA+           
Sbjct: 7   DSTFKKERRRKNKKKEIEAMASEKRLEAGDEGEGSRKRRRKEKLLEEAAEDGGPRAVGID 66

Query: 122 ---SGSENFFEKRTIALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKK---QLL 181
               G EN  +       DA   R  + +    D ++    NG+   RKI++KK   QL 
Sbjct: 67  SEIDGRENEEDSNQNGGADAARARDVDSVNPPDDVEM--EPNGEEAMRKIRKKKKKTQLA 126

Query: 182 KEAANADMRGICYLSRVPPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRG 241
           KEAA A  RG+CYLSR+PPHMD ++LRQILSQYGEIQRIYLAPED A+QV+RKRAGGFRG
Sbjct: 127 KEAARAGNRGVCYLSRIPPHMDHVKLRQILSQYGEIQRIYLAPEDPAAQVKRKRAGGFRG 186

Query: 242 QFFSEGWVEFTDKRVAKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAY 301
           Q FSEGWVEF  K VAK+VANMLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEE AY
Sbjct: 187 QGFSEGWVEFAKKSVAKRVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAY 246

Query: 302 KHAIREQKLALEISAAKRERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNSLD-DSQ 361
           K+AIREQKLALE+SAAKRERD YL+KVD+SRAL+SIEERLKKKQ+ +E S  +     SQ
Sbjct: 247 KNAIREQKLALELSAAKRERDFYLSKVDQSRALSSIEERLKKKQRSQEGSVKSPEQLVSQ 306

Query: 362 KLPKLIRSFPQTQPVADVAVQNKQRLSTNVLARVFGSS 378
            + K+IR FPQ QPVA  A QNK RLS ++LA VFG+S
Sbjct: 307 PVAKVIRQFPQKQPVAKNAAQNKPRLSKDILAGVFGAS 342

[Close]

BLAST of MELO3C021598 vs. NCBI nr
Match: gi|297734519|emb|CBI15766.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 342.0 bits (876), Expect = 1.3e-90
Identity = 179/261 (68.58%), Postives = 211/261 (80.84%), Query Frame = 1


Query: 118 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 177
           +A E+ E +RT +     S+    E ++ K   RK K KK+LLKEA+ AD RG+CYLSR+
Sbjct: 88  MAEEEQEIKRTSH-----SEEGESEGNDEKGRIRKNKLKKRLLKEASKADKRGVCYLSRI 147

Query: 178 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 237
           PPHMD ++LR ILSQYGEIQRIYLAPED A+QV RKRAGGFRGQ FSEGWVEFT K VAK
Sbjct: 148 PPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKKTVAK 207

Query: 238 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 297
           +VA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEE AYK+AIREQKLALE+SAAK
Sbjct: 208 RVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALELSAAK 267

Query: 298 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 357
           RERD YL+KVDKSRAL+SIEERLKKKQK+++D+  N+    + + PK+IR FPQ  P+AD
Sbjct: 268 RERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKPPLAD 327

Query: 358 VAVQNKQRLSTNVLARVFGSS 378
            A ++K RLS ++LA VFG S
Sbjct: 328 KAAESKPRLSKDILAGVFGGS 343

[Close]

BLAST of MELO3C021598 vs. NCBI nr
Match: gi|225456507|ref|XP_002284683.1| (PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera])

HSP 1 Score: 342.0 bits (876), Expect = 1.3e-90
Identity = 179/261 (68.58%), Postives = 211/261 (80.84%), Query Frame = 1


Query: 118 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 177
           +A E+ E +RT +     S+    E ++ K   RK K KK+LLKEA+ AD RG+CYLSR+
Sbjct: 1   MAEEEQEIKRTSH-----SEEGESEGNDEKGRIRKNKLKKRLLKEASKADKRGVCYLSRI 60

Query: 178 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 237
           PPHMD ++LR ILSQYGEIQRIYLAPED A+QV RKRAGGFRGQ FSEGWVEFT K VAK
Sbjct: 61  PPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKKTVAK 120

Query: 238 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 297
           +VA MLNGE IGGRKRSSFYYDLWNIKYLSKFKWDDLTEE AYK+AIREQKLALE+SAAK
Sbjct: 121 RVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALELSAAK 180

Query: 298 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 357
           RERD YL+KVDKSRAL+SIEERLKKKQK+++D+  N+    + + PK+IR FPQ  P+AD
Sbjct: 181 RERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKPPLAD 240

Query: 358 VAVQNKQRLSTNVLARVFGSS 378
            A ++K RLS ++LA VFG S
Sbjct: 241 KAAESKPRLSKDILAGVFGGS 256

The following BLAST results are available for this feature:

BLAST of MELO3C021598 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ESF2_SCHPO	5.9e-43	33.23	Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
ESF2_PICST	1.9e-41	32.62	Pre-rRNA-processing protein ESF2 OS=Scheffersomyces stipitis (strain ATCC 58785 ...	[more]
ESF2_GIBZE	3.2e-41	36.33	Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620...	[more]
ESF2_DEBHA	4.2e-41	31.74	Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain ATCC 36239 / C...	[more]
ESF2_CANAL	5.5e-41	36.46	Pre-rRNA-processing protein ESF2 OS=Candida albicans (strain SC5314 / ATCC MYA-2...	[more]

BLAST of MELO3C021598 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUC2_CUCSA	3.2e-189	91.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517890 PE=4 SV=1	[more]
D7SH86_VITVI	9.0e-91	68.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g00140 PE=4 SV=...	[more]
W9QHA4_9ROSA	1.2e-90	54.19	Pre-rRNA-processing protein esf2 OS=Morus notabilis GN=L484_002507 PE=4 SV=1	[more]
V4U1X3_9ROSI	9.9e-90	56.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015979mg PE=4 SV=1	[more]
A0A067LGC0_JATCU	4.9e-89	48.24	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10228 PE=4 SV=1	[more]

BLAST of MELO3C021598 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56510.1	1.8e-82	59.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of MELO3C021598 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117889\|ref\|XP_008458840.1\|	4.0e-209	100.00	PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo]	[more]
gi\|449450052\|ref\|XP_004142778.1\|	4.6e-189	91.60	PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis sativus]	[more]
gi\|702465051\|ref\|XP_010029078.1\|	8.9e-92	57.99	PREDICTED: pre-rRNA-processing protein ESF2 [Eucalyptus grandis]	[more]
gi\|297734519\|emb\|CBI15766.3\|	1.3e-90	68.58	unnamed protein product [Vitis vinifera]	[more]
gi\|225456507\|ref\|XP_002284683.1\|	1.3e-90	68.58	PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0000480	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000472	endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0034462	small-subunit processome assembly
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48748	melon EST collection version 4.0	transcribed_cluster
MU61584	melon EST collection version 4.0	transcribed_cluster
MU64219	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021598T1	MELO3C021598T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU61584	MU61584	transcribed_cluster
MU64219	MU64219	transcribed_cluster
MU48748	MU48748	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 173..252 score: 8.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 171..255 score: 0.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 170..252 score: 9
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 172..252 score: 7.
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 166..252 score: 6.92
None	No IPR available	unknown	Coil	Coil	coord: 313..333 score: -coord: 64..84 scor
None	No IPR available	PANTHER	PTHR12311	FAMILY NOT NAMED	coord: 65..377 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021598	Csa5G517890	Cucumber (Chinese Long) v2	cumeB360
MELO3C021598	Cla004636	Watermelon (97103) v1	mewmB003
MELO3C021598	ClCG09G019430	Watermelon (Charleston Gray)	mewcgB002
MELO3C021598	Cla97C09G180890	Watermelon (97103) v2	mewmbB038
MELO3C021598	Bhi06G000493	Wax gourd	mewgoB022
MELO3C021598	CSPI05G18030	Wild cucumber (PI 183967)	cpimeB350
MELO3C021598	Cucsa.011090	Cucumber (Gy14) v1	cgymeB336
MELO3C021598	CmaCh04G026690	Cucurbita maxima (Rimu)	cmameB634
MELO3C021598	CmoCh04G027980	Cucurbita moschata (Rifu)	cmomeB624
MELO3C021598	Lsi02G016070	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C021598	Cp4.1LG01g23600	Cucurbita pepo (Zucchini)	cpemeB358
MELO3C021598	CsGy5G017710	Cucumber (Gy14) v2	cgybmeB300
MELO3C021598	Carg04475	Silver-seed gourd	carmeB0682
MELO3C021598	CsaV3_5G026950	Cucumber (Chinese Long) v3	cucmeB359

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021598	Cucurbita pepo (Zucchini)	cpemeB155
MELO3C021598	Cucurbita pepo (Zucchini)	cpemeB550
MELO3C021598	Cucurbita pepo (Zucchini)	cpemeB594
MELO3C021598	Silver-seed gourd	carmeB0260
MELO3C021598	Silver-seed gourd	carmeB0370
MELO3C021598	Silver-seed gourd	carmeB0441
MELO3C021598	Cucurbita maxima (Rimu)	cmameB081
MELO3C021598	Cucurbita maxima (Rimu)	cmameB212
MELO3C021598	Cucurbita maxima (Rimu)	cmameB251
MELO3C021598	Cucurbita moschata (Rifu)	cmomeB075
MELO3C021598	Cucurbita moschata (Rifu)	cmomeB196
MELO3C021598	Cucurbita moschata (Rifu)	cmomeB239