CsGy5G017710 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G017710
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionpre-rRNA-processing protein ESF2
LocationChr5 : 23933412 .. 23941772 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAATTATCTTCTCCAAGAGAACACAACCGTCCCACCCCTTCGAACACAACCTCGCCGACAGGTCACTGCCCAGCTACCGCGCACGACTCGACCGCTGCAGCTTCGTGTGCAGGAGACGCCGCGCTCAGGAGTTTTAGCTTGCACGCCACCGTTCGCCGCCGTCACACCAAACCCACGAATCTGGCAGTAGCTTAGTTGTTTGCTCGCGTCATTGTCTCATATTTGTCTTGTGCCGCAGCTTTGAACACCACGTGCCGTTCTCGCTAAATTTTGGCTTTCGGGTAAGAACTAATATATTTTAGTTGGGTTTCTTGTAAACTTTCGAACACCCACTAAGTTTTGGCTTGAATTAAACATTTTCCATCAAGTTTCGACGTTAGACTTGAATTCTTGGAAGAGATTGAGCCGCTGCCCAGCTGATAGCGAACTCGAAATTGGGCATTTAGATAAATTTTTGGTGAGAATCTCGGTTATCTTGGATAGGTCTTGAATACCCATTAGAGGTTTGTTGTAAGAATTTATTTACCCATGATTTTAATGCTAAATTCGAGTTTAGAAAGCCTTATTGTGCTGTCTAGCGAAGTTAGGATGATTTTGACAAGCTTTTGGATACTTTCAATGAGTTTTCTTGGAATTTGTTTAATACTCATTTAGTTTTGGCATGAACTTGAGTTACCCTTATTGTTTAATATGAAAGATTGAAGACTTGGAGAACTTTGAAGCATTGATCAACACATCTAAGTTCTGTTTGGACAAGTTTGGGTAAATTCTTAAGTTATTGATCTGTTAGGTTGATATTGAGATTGTTAATGGATCTGAATCTCTAAAGTATTGATATTAGGTATAAGAGCGTATTGACATGAGAGACCCAATTAAGTTTGGATATTCATTGTATTAAGATTTTAGATTTCAAGTTTAACAAATTGAAAATGGAGTTTTAGACAAAATTAAGGCATTTGAGAATGATTCGAGTTAAATCTAGGAAGTGGGGATTATGGTCATTGGAAGCATAAACGAGCTTGAGTTGACCCTATGAGGTGTGTTGAGCATGGTTGAGTCACCTTGACATATGGAATAACTTATTATTCATATAACTATTCTGAACCAAATTGGGGAGAGCGTATTATTCTAGAGGATCGAGCTATTGATTGTTAGCGGTTACTTTCAAATATTTGATATGAAAATTTATTTTAGACGTATGGTTGAATTTGGTTTGTGAATAAGTGTTTGGCATAACTTTTTTTTGACATAATTGTATTATCAATGATGATCTTTAATGAAAGTTTCTAGTTTTTCATGAATTCTCTGTTATGTGAATTTGTAATATCTGTCTTTGAACAGGGTTTGATTTAATTACAATTTACGTGAGTTATGATCCAAATGTGATTTTATAATGAATTTGATGAATTATTTGGAAGCTGAGATAAGTAGCTTTGGTTTTTCTAATATTTTGAGTTCTTGAAATTTGTGTTAAAATATTTAGTTTGGATTTATCGATGAGAATGCTTCTGTTTTGCTTATTAAGAAAAACTTTACTTTAGCTTTGGATTGCATGAAATGATTGGGTATGAAATGTATTTATAGATGATGGTTTATGGAGGAATGTGAAGTTTTGTTTTCGAAGCACAACACTGGTGTATCATGGTGATTTTACCCATAGGCTACGTGAATGTGTTTTCATAACGCCACCTACGGTTGTCAGGGGATTCTAGGGTTGAGAGAGGTTGTAACGTAGAGATCTAGGAACCTGAATCTAAGTGAGGAGGTGAATGGAGATTGTGGCATTGGCTTCGGGCCTTGATTGACCCTTGGAGGGTAGCTCTATGTGCATATAGGAGCCTAGTTATCGATGATGTCGAAACTGTGATTAAGTTGCAACTGTTGCAGGTACTGAATATGTGTGAGCTCAGTTTGGACTCATGTTTTCTTGTTGATATGGAACATGCGTTAGCTTCTTGACTGTATATTCAGTTTATTTTGTTGTGGTAGACGGAGATAAGGACAGATTTGACTGTGAATATGCGTGAGTTCAGTCTGGCTGCATGTTCCCTTTGGATCATGTGTGAGCTATTCTCTGCCGTATATTCAGTGTTTTTCTTTACTGTGGTGGACTCGGATATGACACAGGGTTCATGGTAAATACATGTGAGCTCGGTATGGCCTTATGTTTCATTGTTGACATTGGCACGCCCGTGTTATGCTTTGCCGCGTATTTGCCATAGCTCATTGTGTTCGACTTGGATATGAACTGGTTAATATATTTCTAGACAGGCTTGTTACAGTTTTATAATAATGTGTTTAAAAAACTTTCCTATTTTAAATAGCAAAACTATGTATAATGATTACTTAATGAAAGTATGTTTTTACATGCCTTGTTTTTTTTTAAACATGCCTTGTTTTTTTTTTATTAGCTTACCACTCACTGGGCGTTAGCTCACATTTTCAAATGTTTTTCTCTTAGGTAGTGATTAAGTTCTAGGTGCCTATTAAGCCATCAAATGCCACTCATTTCTGTTAGACATCTGCGACATCATACTACATGTATTTGAAGAGTACTATTATGATAGGTTGAATTTTTTAGTGAATGTCATAGGATGTTTGTTTTAAATACCTTTACTTTTGGACTGTAATTTATTTTAGAGTTGTTTTATCAAGTTTATACATGAAATTTTGTTTGGTATTTGGATGATTTTGATGAGTGTGTGGTGAGAGACTTGGAACTTGTTTGAAATTGTAAACGTTAGAAGTGTGTTCTCCTTTTCTTTCCATTCTAGGTGTGGTTAGCCCATTCTTAGGGGAGACTTTGTCGAAATTTTTATAAGGATATTTGACAAGTGCTTTGAGTAGAACCTTCATGAGGGAAAAATCTACAATGTGGTGTGACAGATTTGGTATCAAAGAATGGTTTTGGGAAACCTAAGGGTTATGAGCAAGAGTTTGGAAATCTAGAGGTTTTGCATTAGATAGTTAGCATGAGTAAGTTGCTTGGAAACATGCTCATTGTGGTCTACGACCGAACTTGTGATGCTCTTGTTAGTTTAGACGTGGGACTAACGAATTTGAAGTTGAAGCCAACCGTGTTGAGAAGAACTTTGATGAGCGGATGATGCCTTGTTCGGCTCAAGAAATTGTCGTCGGTATGAGAGTTATGCAAGATAATCCCACGAAGAACTTCAAAGTTAAGTGTTTGAAGGCTTTGAGAGCAACAATATTTTTCATAAAAGACTAATCCCAGGAATGTAGAATATTGGTTGGAGATAGCATAGAACTGTTTGGGGCCCTGAGTTGTCTAAATGAAAGGAAGGCAAGACTTGTGATAGACCACCAATTATTTTACAATATAGTAGGAGGAAAAAGGGAGCAGTTGCACGTGAACAAGAGAAGGGAAATGAAGAAAGAAGTGGAAACCACCTTGGTGGGGACCACGGTTAGTTACATGGGAGAGAGTTAAAAGGGAAAGAAGGAAGGGATGGGAGGGGTGGTTAGTCAGTTTCTGGAAGTGGAGGGCTGTAATTTCCTGGAGAGCAGGGAATGCAGAAAGTGTTCAGTTTCTGTAGTCTGTAGCAAGTTATTTCCATTATAGTGAAGTCCTTCACTGTTTTGTTGTTTTATGTTGAACTTGGTTTATCTTTGTATTAGGTCTTGTGTTGTACTTTGTTTTCAAGACTGTGTTAGTACTGTTTTCTGTAAAAGTTTGGCTGATAAATAAATTAGTAGAACACACTACTTGGTGTTCTATCAGTCCCTTAGTGAGGTTTAGGGGGTGTGTGCTTTATTGTGAGATGTTTAGGTGTAGAGGAACAATAGGGTGTTTTAGAGGTTTAGAAAAGGACCCAAGTGAGTTTTGGTTCTTAGTGAGGTTTCCTGTTTCATTTTGGGATTCAGTTTTGAAGCTTTTTTGTAATTATTCTCTATGTAACATCTTTCTTGATTGGATACCCTTTCTTCCGAAGCTTCTTTTCTTGGATTAAGGCTTTGGATCAAAACGGTCAAAGACTGGTGTGGTGAGCATGTGTCTAGAAAGTCTAATATTAGGGGACTCGAGGAAGAAGTACAATTCATTGCCAAGACAACCTCATATATGCTAAAACCAAGTATATATATTGTTCCAGTACATCCTGCTTTCAGTTGTCAATTTCACAAATTTTTTTATTGTCTGAATCTCTCTCTAAGTTTTGAAACCTCTATCTATTCATGTTCTGCTAGGCTTGTGCTCAGTAAATAAATATGGAAGTAGAATTGAACTCCTTACTGATCATCTGTTCGATTAAGAATTGTTTTTAGAGAACGTTGGATTAAGAAATTCAGAAGTGATTTAATGAAGTTTGTTTGTACAGTGTATATAATTCATGCTTACAGCGATAGAACCCTGATGTTATTCTTATTTTTCTTATAGCGGCAATATATATATATATATTTTTTTTATTGTCATTTGAAGTTGTTAATTGTATCTTGTAGGAAGATGTCCAATGAGGAGAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCAGAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAAAGGTGTAGATGTCATGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGAAAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAACAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAATTTTTTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAAAAATCAAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAAACTTCGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGGTAATGAATAATTATGCATAATATTTATTTTTTCTATTTAGTTTCTGTTGCTTCAAAATCTTACTTGCCTATTTGTTCTCCCATTTGTTCCATTGCTGTCAATTTGTTTAGAATCTATTTTTTTCTAGTTTACTTTTTCAAGGTAATTTATGCTTTCGTGTTCAGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCAGAAGGGTAAACTCACATGCCCAGCTAATTTTTTTTATGTTTTAATTGTTTGTGTTCCAACCTTCAAGTGACAAATTATAATAATAAAGTAATAAAGAACGTTGCTTGGCTTTTCAAATGACTTGGTTTTAGTTACTGATTTGTATTGTCCGTATATGTACTCTGCAGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGGGTGGCTAATATGTTAAATGGCGAACCAATAGGTAAACTTTTATTTAAGTATACATGTTTTGTATCTGATATCCTGGTTCGATTCATGATTTTTACTCTCTTTGGGAGATGTTGGAAATCATTGCATATGGCTGGTCTTTCGGGTTTCATCCCTCTTTGTCAAATAGGGAATTGATAGACATGGCCTATTTACTTGAGGGCCATCGTAGTAGGTGTGGGAGAAGGGATGTGACAGTTTGTAGTCTCAATCCACTGGTGGGATTCTTGTGTAAGTCAGCTCTTCCAAAATATGCGTGACCCTTTCCTTCTCCTAGGCAAGTCAGTCTTTGAAGGATTAAGATCCTAGAAAAAAGGCAAGTTTTACATGCCCTCAGCAATATGATGGATCAACTTGTGAGGAAGTTGTCATCACTTATTGGTTCTTTTTGGTGTATCCTTTGTAGGAAGGTAGAGGAAGATCTGGACCATATTCTCTGTTGTCGTGAGTTTGGGAGCTTCTTTCAAACTTCTTTTGGGACTATTTTATCCAGATGTTTGGTATTTTCCATGGGCGGGTCATTGACAGCATGATTGGGAAGTTCATCATTCTTTTTGGGAGAATGGTCAATTTTTATGGCAATTGGGGGTGGGGGATAGTAGGACATTTGGAGGTGGAAAGAAACCTTAGTGAGGATATTTATATATGGACTTCAACTTCGAAACCTTATGTGACTATTCTACAGACACTACCTTGCATAGTTGGAGTCCCTTTCTGCGAAGGATCTCCTTCTTTTATGGGCTTGGTTTTGTATCTGCTTGTAGTCCTTCATTTTTTTTCTCAATAAAAGTTGTGTTTCTCTACCTGTTGTGCATGGGTTTAGGAGGAAGGAAGAGGTCATCTTTCTATTACGATCTCTGGAACATCAAGTATTTGAGTAAATTCAAGTGGGATGATCTCACGGAAGAAACTGGTACACACCTCAAAAACTTGGTCTTACCCTATTTTTGCTTACAAGTTACATCTCTTTTACTGATATTGAACATTTTACATTTTGCAGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGACTAAAGAAGGTAATCGAAGAGCCTTACTGGCTTACATCACTACACTGTCTCAGTATGTATTTGGGCGTTTTTGGGGATCCACATATATGCTCAAATATTGATTTGATTTGGAAATTTAACTGCGGTTGATTTTTTTCATCATATTGTTGTACTTGTATGTGTTGTCCCCGTTTTGGAAATATAAAATTTACCCTTTTTTTATATGGCTTACAGAAGCAGAAGATGAGAGAAGATTCAGAGATGAATTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTACAAATGTCTTGGCTGGGGTAAGTAATAACGTTTCATTTACAATCAAAACTTCATCTCATGATTTACCCTTAGTAACTAGATTTTAGCTTGTAAATTTTTATCCTTAGGTTGAGTTCGGTATGATTATTAAAATGGTAAAAAGTGATTTTTAGCTTTGGATAGTTACATGTGTGAATGTGTGATTTTGAAATTTTTAGCAAATAATGTTGTTGAATGGCAGAGAAGAGAACACAAGGTTTAGGTGGAAAATCCTAGAATGGGGAGAAAAAACCACGATAGAGTCTTTTTTTATTGTTTGCACACACAATGAAAATTGTGAGAGAAGACAACTTTAAAGGCTCTAGCAAGCCTTAATACAAAAATGAAAATAAACTTAGAGTAAAGTAAAATACTAAAATACCTTCAGAGCTATAAACTGTGAGCAAAACCCCTTAGTTTCAACAACTGCATTAGGATTCTCGTAGGAACAAAACTCGTAGAGAACAATATTGCAATATCAGTCGACTGAAATTACAATACCAATGGCCTCTGTAGACAATACCAATGGCCTTTGGAGCGGGCAGGACAATACCAAAACTACACATCCCTCCAAAGTGCCCAACCTTTCTAATTTATTACGAAGGCACTACTAACCTTTTCTTTGGTAGACACTACTAACTAGATTATAACTATCCTACTAATATTTGCAATATATCCTTCCTAGTATACAAGTTCTTTGTTCAAAAGTATTTTATCTAAAAGCGTTTCAAACTCAATAAATGATGACCTTGGCTATCTGCAATACATCTTTTGTTCATAAAATTTGATTGGATTGTTGCATTGTGACATATTATTTATACATGTTATAATCAAGGTCTTGGATTTCATCCCCTCTTCTGCAGGTGTTTGGAAGCTCCTAGTCGTCTATTTCCCGACTCCTACTAATTAAAGAGATTTAAGACAAGTGATTTGCTTTATAGACGGGCTTTTTGTAGACAGAGCCAAGCAATCTTTGACTTTCAACTTATTTATCTCATTACACAACAGAAAATGTGTAGAAGGAATAGTTGTAGCTTTGATATTTGTTTACTTAAATCGAACTTTTTGTATTTGATAATTCTGGCAGAAAGCATGGCCAAGTAGTGAATAATAAATCAAGAAAAAGTTTTGGATTTTTCTTATATTTATATTTGTTTTAACAAAATGGGCACAAACGAGTTTGATGGAATTACATCACCAAATGAACAATCTTAAAGAAATTAATTAGGTTTTGTCCGTTAACCCATACTACAAATAAGTTTGACTCTTTGTTTTTCTTTGTTTTTTCATAGATCAACATTTTGATTACTGTGTTTGTTTTGC

mRNA sequence

AAAGAAATTATCTTCTCCAAGAGAACACAACCGTCCCACCCCTTCGAACACAACCTCGCCGACAGGTCACTGCCCAGCTACCGCGCACGACTCGACCGCTGCAGCTTCGTGTGCAGGAGACGCCGCGCTCAGGAGTTTTAGCTTGCACGCCACCGTTCGCCGCCGTCACACCAAACCCACGAATCTGGCAGTAGCTTAGTTGTTTGCTCGCGTCATTGTCTCATATTTGTCTTGTGCCGCAGCTTTGAACACCACGTGCCGTTCTCGCTAAATTTTGGCTTTCGGGAAGATGTCCAATGAGGAGAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCAGAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAAAGGTGTAGATGTCATGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGAAAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAACAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAATTTTTTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAAAAATCAAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAAACTTCGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGGGTGGCTAATATGTTAAATGGCGAACCAATAGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGACTAAAGAAGAAGCAGAAGATGAGAGAAGATTCAGAGATGAATTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTACAAATGTCTTGGCTGGGGTGTTTGGAAGCTCCTAGTCGTCTATTTCCCGACTCCTACTAATTAAAGAGATTTAAGACAAGTGATTTGCTTTATAGACGGGCTTTTTGTAGACAGAGCCAAGCAATCTTTGACTTTCAACTTATTTATCTCATTACACAACAGAAAATGTGTAGAAGGAATAGTTGTAGCTTTGATATTTGTTTACTTAAATCGAACTTTTTGTATTTGATAATTCTGGCAGAAAGCATGGCCAAGTAGTGAATAATAAATCAAGAAAAAGTTTTGGATTTTTCTTATATTTATATTTGTTTTAACAAAATGGGCACAAACGAGTTTGATGGAATTACATCACCAAATGAACAATCTTAAAGAAATTAATTAGGTTTTGTCCGTTAACCCATACTACAAATAAGTTTGACTCTTTGTTTTTCTTTGTTTTTTCATAGATCAACATTTTGATTACTGTGTTTGTTTTGC

Coding sequence (CDS)

ATGTCCAATGAGGAGAGTTCTGAAGTTAATTTAAAAACTGACTGCAGCCCAGAATCTAGAAAGAAAAGAGCAAAAAGTAGAAAAAACAAAAGGAAACAGTTATTGATAAAAGGTGTAGATGTCATGGAAATGAAAGATGTAGGATCTGTTCAGCTGGGTGAAAGCAACATGAACACTGATAGTGACAAAGTGAAAAAGAAGAAAAAGAAGAAAAAGAGAAAGAAGAGTACTCAACAACGTGTAGAGGAGAGCTTTATCAAGGATGAGGCTGGAGAATATGAAAATAGAGCAGAGACTTTTATGAAAGAGGCTAGTCCTGTCTCTAATAGTGGAAGTGAAATTTTTTTCGAGAAGAGGAAAATTGCATTGGAAGATGCTGAGAATGAAAGGACTGACAGTATACTTAGAGAAAACTCTGATGGGAAGATTCTGGAGTCTGACAATGGAAAAAATCAAAGGAAAATTAAGAGGAAGAAGCAGCTCTTAAAGGAAGCAGCTAATGCAGATATGCGTGGTATTTGTTACTTGAGTCGAGTTCCTCCACACATGGATCCTTTGAAACTTCGTCAGATCCTCTCACAACATGGGGAAATACAAAGAATTTATCTTGCACCCGAGGATGCTGCCAGTCAAGTGCAACGAAAGCGTGCAGGGGGATTTCGAGGACAGTTTTTTTCAGAAGGATGGGTTGAATTTACTGATAAAAGAGTTGCCAAGAGGGTGGCTAATATGTTAAATGGCGAACCAATAGCTTACAAGCACGCCATTCGGGAGCAGAAACTGGCTTTAGAAATTTCTGCTGCCAAGAGGGAAAGGGATTTCTATCTTGCTAAAGTTGATAAATCACGTGCATTGAATTCCATTGAAGAACGACTAAAGAAGAAGCAGAAGATGAGAGAAGATTCAGAGATGAATTCTACACTTGATGATAGTCAGAAACTTCCAAAGTTGATCCGCAGCTTTCCACAAACACAACCAGTTGCAGATTTTGCCGTACAAAACAAACCGAGACTATCTACAAATGTCTTGGCTGGGGTGTTTGGAAGCTCCTAG

Protein sequence

MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMNTDSDKVKKKKKKKKRKKSTQQRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRKIALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNGEPIAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS
Homology
[Close]
BLAST of CsGy5G017710 vs. NCBI nr
Match: XP_004142778.1 (PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis sativus] >KGN51341.1 hypothetical protein Csa_5G517890 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 2.6e-166
Identity = 350/380 (92.11%), Postives = 350/380 (92.11%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX
Sbjct: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120
           XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120

Query: 121 IALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVP 180
           IALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVP
Sbjct: 121 IALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVP 180

Query: 181 PHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKR 240
           PHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKR
Sbjct: 181 PHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKR 240

Query: 241 VANMLNGEPI------------------------------AYKHAIREQKLALEISAAKR 300
           VANMLNGEPI                              AYKHAIREQKLALEISAAKR
Sbjct: 241 VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR 300

Query: 301 ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADF 351
           ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADF
Sbjct: 301 ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADF 360

[Close]
BLAST of CsGy5G017710 vs. NCBI nr
Match: XP_016902333.1 (PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo])

HSP 1 Score: 526.2 bits (1354), Expect = 8.7e-146
Identity = 319/381 (83.73%), Postives = 331/381 (86.88%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+   
Sbjct: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNI--- 60

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120
            XXXXXXXXXXXXXXXXXXR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR 
Sbjct: 61  NXXXXXXXXXXXXXXXXXXRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRT 120

Query: 121 IALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRV 180
           IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRV
Sbjct: 121 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 180

Query: 181 PPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240
           PPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK
Sbjct: 181 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240

Query: 241 RVANMLNGEPI------------------------------AYKHAIREQKLALEISAAK 300
           +VANMLNGEPI                              AYKHAIREQKLALEISAAK
Sbjct: 241 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 300

Query: 301 RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVAD 351
           RERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD
Sbjct: 301 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 360

[Close]
BLAST of CsGy5G017710 vs. NCBI nr
Match: XP_022990094.1 (pre-rRNA-processing protein ESF2 [Cucurbita maxima] >XP_022990095.1 pre-rRNA-processing protein ESF2 [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 9.7e-121
Identity = 260/383 (67.89%), Postives = 288/383 (75.20%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           M  EES EV+L TDCSPES KK  K  K K+KQLL++GVDVME    GSV+LGESN+   
Sbjct: 1   MPKEESFEVDLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSVELGESNINSE 60

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSE--IFFEK 120
                               V E+ I+ EAGEYE +AE  +KE SP+S+ GSE     E+
Sbjct: 61  VKNKKKRRKSTKQC------VVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEE 120

Query: 121 RKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLS 180
           R+ ALED ENE  DSI+RE S  KILES+NGK +QR IKRKK+LLKE ANADMRGICYLS
Sbjct: 121 RQFALEDDENESADSIVRETSGEKILESNNGKTDQRNIKRKKRLLKEVANADMRGICYLS 180

Query: 181 RVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRV 240
           RVPPHMDPLKLRQILSQ+GEIQRIYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRV
Sbjct: 181 RVPPHMDPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRV 240

Query: 241 AKRVANMLNGEPI------------------------------AYKHAIREQKLALEISA 300
           AK+VANMLNGEPI                              AYKHAIREQK+ALEISA
Sbjct: 241 AKKVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISA 300

Query: 301 AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPV 351
           AKRERDFYL+KVDKSRAL SIEERLKKKQK+REDSEMNS L DSQKLPKLIR+FPQTQPV
Sbjct: 301 AKRERDFYLSKVDKSRALKSIEERLKKKQKLREDSEMNSELADSQKLPKLIRNFPQTQPV 360

[Close]
BLAST of CsGy5G017710 vs. NCBI nr
Match: XP_022922239.1 (pre-rRNA-processing protein ESF2 [Cucurbita moschata] >XP_022922247.1 pre-rRNA-processing protein ESF2 [Cucurbita moschata])

HSP 1 Score: 433.3 bits (1113), Expect = 7.7e-118
Identity = 256/383 (66.84%), Postives = 284/383 (74.15%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           M  EES EV L TDCSPES KK  K  K K+KQLL++GVDVME    GS +L ESN+   
Sbjct: 1   MPKEESFEVGLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSFELWESNINSE 60

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSE--IFFEK 120
                               V E+ I+ EAGEYE +AE  +KE SP+S+ GSE     E+
Sbjct: 61  VKNKKKRKKSTIQC------VVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEE 120

Query: 121 RKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLS 180
           R+ ALE+ ENER DSI+RE S  KILES+NGK +QR IKRKK+LLKE ANADMRGICYLS
Sbjct: 121 RQFALENDENERADSIVRETSGEKILESNNGKTDQRNIKRKKRLLKEVANADMRGICYLS 180

Query: 181 RVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRV 240
           RVPPHMDPLKLRQILSQ+GEIQRIYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRV
Sbjct: 181 RVPPHMDPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRV 240

Query: 241 AKRVANMLNGEPI------------------------------AYKHAIREQKLALEISA 300
           AK+VANMLNGE I                              AYKHAIREQK+ALEISA
Sbjct: 241 AKKVANMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISA 300

Query: 301 AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPV 351
           AKRERDFYL+KVDKSRAL SIEERLKKKQK+REDSEMNS L DSQKLPKLIR+FPQTQPV
Sbjct: 301 AKRERDFYLSKVDKSRALKSIEERLKKKQKLREDSEMNSELADSQKLPKLIRNFPQTQPV 360

[Close]
BLAST of CsGy5G017710 vs. NCBI nr
Match: XP_023528511.1 (pre-rRNA-processing protein ESF2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 5.0e-117
Identity = 254/383 (66.32%), Postives = 283/383 (73.89%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           M  EES EVNL TDCSPES KK  K  K K+KQLL++GVDVME    GSV+L ESN+   
Sbjct: 5   MPKEESFEVNLTTDCSPESSKK-LKGSKKKKKQLLVEGVDVMERNVEGSVELWESNINSE 64

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSE--IFFEK 120
                               V E+ I+ EAGEYE +AE  +KE SP+S+ GSE     E+
Sbjct: 65  VKNKKKRKKSTKQC------VVENSIQAEAGEYEIKAERSVKEGSPLSDGGSEKNEILEE 124

Query: 121 RKIALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLS 180
           R+ A ED ENER DSI+RE S  KILES+NGK +QR +KRKK+LLKE ANADMRGICYLS
Sbjct: 125 RQFAFEDDENERADSIVRETSGEKILESNNGKTDQRNMKRKKRLLKEVANADMRGICYLS 184

Query: 181 RVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRV 240
           RVPPHMDPLKLRQILSQ+GEIQRIYLAPEDAA+QV+RKRAGGFRGQFFSEGWVEFTDKRV
Sbjct: 185 RVPPHMDPLKLRQILSQYGEIQRIYLAPEDAANQVKRKRAGGFRGQFFSEGWVEFTDKRV 244

Query: 241 AKRVANMLNGEPI------------------------------AYKHAIREQKLALEISA 300
           AK+VAN LNGE I                              AYKHAIREQK+ALEISA
Sbjct: 245 AKKVANTLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKMALEISA 304

Query: 301 AKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPV 351
           AKRERDFYL+KVDKSRAL SIEERLKKKQ +REDSEMNS L DSQKLPKLIR+FPQTQPV
Sbjct: 305 AKRERDFYLSKVDKSRALKSIEERLKKKQNLREDSEMNSELADSQKLPKLIRNFPQTQPV 364

[Close]
BLAST of CsGy5G017710 vs. TAIR10
Match: AT3G56510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 206.8 bits (525), Expect = 2.1e-53
Identity = 116/220 (52.73%), Postives = 148/220 (67.27%), Query Frame = 0 

Query: 161 LLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGF 220
           LLKEA+ AD RG+CYLSR+PPHMD ++LR IL+Q+GE+ RIYLAPED+ +QV RKRAGGF
Sbjct: 39  LLKEASKADNRGVCYLSRIPPHMDHVRLRHILAQYGELGRIYLAPEDSEAQVHRKRAGGF 98

Query: 221 RGQFFSEGWVEFTDKRVAKRVANMLNG------------------------------EPI 280
           RGQ FSEGWVEF  K VAKRVA+MLNG                              E I
Sbjct: 99  RGQRFSEGWVEFAKKSVAKRVADMLNGEQIGGKKKSSVYYDIWNIKYLTKFKWDDLTEEI 158

Query: 281 AYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDD 340
           AYK AIREQKL + +SAAKRE+DFYL+K++KSRA+  I+ R++KK+K++E+S  N+    
Sbjct: 159 AYKSAIREQKLNMVLSAAKREKDFYLSKIEKSRAMTEIDARMEKKRKIQEESGSNAEAAP 218

Query: 341 SQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS 351
               P+ I  F Q + + +   Q+KP LST+ LA VFG S
Sbjct: 219 VFP-PRAIFQFRQKKSIENETSQSKPGLSTDFLASVFGGS 257

[Close]
BLAST of CsGy5G017710 vs. Swiss-Prot
Match: sp|Q4HZ47|ESF2_GIBZE (Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=ESF2 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.4e-22
Identity = 72/222 (32.43%), Postives = 117/222 (52.70%), Query Frame = 0 

Query: 158 KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRA 217
           KK L+   A     G+ YLSR+PP M P KLR +L  +G I RI+LAPED AS  +R RA
Sbjct: 104 KKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGTINRIFLAPEDPASHARRVRA 163

Query: 218 GGFRGQFFSEGWVEFTDKRVAKRVANMLNG------------------------------ 277
           GG + + ++EGWVEFT K+ AK V ++LN                               
Sbjct: 164 GGNKKRSYTEGWVEFTKKKDAKAVCDLLNARTIGGKKGSYYHDDLWNLLYLKGFKWHNLT 223

Query: 278 EPIAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNST 337
           E IA ++A R  ++  EIS + +E   ++  V+K++ L+ +  + K K++    +E ++ 
Sbjct: 224 EQIAAENAERSSRMRAEISKSTKENKEFVRNVEKAKMLDGMAVKAKAKKR---KAETHTE 283

Query: 338 LDDSQKLPKLIRSFPQTQPVADFAV--QNKPRLSTNVLAGVF 348
             + + + ++ RSF Q  P+A   +  +++P   T VL+ +F
Sbjct: 284 GQEDESVRQVKRSFKQV-PLAKKKMDGEDQPAEVTRVLSKIF 321

[Close]
BLAST of CsGy5G017710 vs. Swiss-Prot
Match: sp|Q59YL9|ESF2_CANAL (Pre-rRNA-processing protein ESF2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ESF2 PE=3 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-21
Identity = 83/257 (32.30%), Postives = 131/257 (50.97%), Query Frame = 0 

Query: 126 AENERTDSILRENSDGKI-LESDNG-KNQRKIKR--KKQLLKEAANADMRGICYLSRVPP 185
           A +E ++  + ++ DG   L  D G K  +K+K+   K+L KE       G+CYLSRVPP
Sbjct: 74  AYDEESEENIGDDEDGNADLSLDGGSKVNKKLKKLTSKELAKEQKRIKRTGVCYLSRVPP 133

Query: 186 HMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRV 245
           +M P KLR +LS+ GEI R++L PED +   +R + GG + + F+EGW+EF +K  AK  
Sbjct: 134 YMKPAKLRSVLSRFGEIDRLFLKPEDPSVYHKRVKYGGNKKKNFTEGWIEFVNKSDAKLC 193

Query: 246 ANMLNG------------------------------EPIAYKHAIREQKLALEISAAKRE 305
           A  LNG                              + IA ++ +R+ KLA+EIS  ++ 
Sbjct: 194 AATLNGNKLGGKKTSYYYDDIINIKYLPGFKWLDLTQQIAKENEVRQAKLAMEISQQQKL 253

Query: 306 RDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFA 348
              +++ V+KS+ + +I+    KK+K  +D   N   D  Q+     RS  +     D  
Sbjct: 254 NKSFVSNVEKSKMIANIQ----KKRKTTDDD--NIRRDFKQRKVTTTRSDAKD----DLK 313

[Close]
BLAST of CsGy5G017710 vs. Swiss-Prot
Match: sp|O74362|ESF2_SCHPO (Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=esf2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 72/230 (31.30%), Postives = 111/230 (48.26%), Query Frame = 0 

Query: 127 ENERTDSILRENSDGKILESDNGKNQRKIKR--KKQLLKEAANADMRGICYLSRVPPHMD 186
           E+E +D           L+ +  KN   IK+   +++ K+       G+ YLSR+PP+M 
Sbjct: 75  ESETSDHEDFSGGSENELDEETTKNANSIKKISLEEVEKQRKAIKRSGVIYLSRIPPYMA 134

Query: 187 PLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANM 246
           P KLRQILSQ+G+I R+YL PE +A + QR R GG +   + EGW+EF  KRVAK VA +
Sbjct: 135 PNKLRQILSQYGKIGRVYLTPESSAKRAQRLRNGGNKRVMYEEGWIEFESKRVAKSVAEL 194

Query: 247 LN------------------------------GEPIAYKHAIREQKLALEISAAKRERDF 306
           LN                               E IA ++A RE +L +EI   +++   
Sbjct: 195 LNTNQIGGKKSSWYHDDIWNMKYLPKFKWHHLTEQIAAENAARESRLKVEIEQGRKQLKQ 254

Query: 307 YLAKVDKSRALNSIEERLKKKQKMR---EDSEMNSTLDDSQKLPKLIRSF 322
           Y+  V+ ++ +  I ++  ++  +    E  E    L +  K  K  R F
Sbjct: 255 YMRNVENAKMIEGIRKKRSERDTLNVSTEFPEETKDLSEDTKPSKQARRF 304

[Close]
BLAST of CsGy5G017710 vs. Swiss-Prot
Match: sp|Q6BSS5|ESF2_DEBHA (Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=ESF2 PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.9e-20
Identity = 72/239 (30.13%), Postives = 123/239 (51.46%), Query Frame = 0 

Query: 147 DNGKNQRKIKRKK----QLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIY 206
           +N K  + I  KK    QL KE       G+CYLS++PP+M P KLR +LS+ G+I R++
Sbjct: 67  ENSKQAKNINLKKLTPEQLAKEQKKIKKTGVCYLSKIPPYMKPAKLRSVLSRFGKIDRLF 126

Query: 207 LAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNG--------------- 266
           L PED ++  +R + GG + + ++ GWVEF +K+ AK  A  LNG               
Sbjct: 127 LKPEDNSTYTKRVKYGGNKKKNYTAGWVEFINKKDAKLCAGTLNGNKLGGKKSSYYYDDI 186

Query: 267 ---------------EPIAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERL 326
                          + IA ++ IR+ KL++E+S  ++    ++  V+KS+ +N+++   
Sbjct: 187 INIKYLSAFKWFDLTQQIAKENEIRQAKLSMELSQQQKLNKSFINNVEKSKMINNMQN-- 246

Query: 327 KKKQKMREDSEMNSTLDDSQKLPKL-IRSFPQTQPVADFAVQNKPRLS---TNVLAGVF 348
           K+K +  E    NS  ++S     L  R    T+  A+  +++K + +    +VL+ VF
Sbjct: 247 KRKARQAESGADNSNKEESDIRRNLKQRKLASTRADAEDELKHKSKPNEKLNDVLSKVF 303

[Close]
BLAST of CsGy5G017710 vs. Swiss-Prot
Match: sp|Q2GZQ4|ESF2_CHAGB (Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=ESF2 PE=3 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 5.0e-20
Identity = 57/176 (32.39%), Postives = 90/176 (51.14%), Query Frame = 0 

Query: 158 KKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRA 217
           KK L+   A     G+ YLSR+PP M P KLR +L  +G+I RI+L PED     +R R 
Sbjct: 107 KKNLVASEAAIKKSGVVYLSRIPPFMKPAKLRSLLEPYGKINRIFLTPEDPTEHTRRVRN 166

Query: 218 GGFRGQFFSEGWVEFTDKRVAKRVANMLNG------------------------------ 277
           GG + + F+EGWVEF  K+ AK+V ++LN                               
Sbjct: 167 GGNKKRSFTEGWVEFVKKKDAKKVCDLLNAQTIGGKKSSWYHDDVWALKYLNGFKWHHLT 226

Query: 278 EPIAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSE 304
           E I+ ++A R  ++  E++   RE   ++  V++++ +N I+ +   K+K  +DSE
Sbjct: 227 EQISAENAERTSRIRAEVAKTTRENKEFVRNVERAKVINGIQSKAAAKRKKTDDSE 282

[Close]
BLAST of CsGy5G017710 vs. TrEMBL
Match: tr|A0A0A0KUC2|A0A0A0KUC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517890 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 1.7e-166
Identity = 350/380 (92.11%), Postives = 350/380 (92.11%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX
Sbjct: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120
           XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK
Sbjct: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120

Query: 121 IALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVP 180
           IALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVP
Sbjct: 121 IALEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVP 180

Query: 181 PHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKR 240
           PHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKR
Sbjct: 181 PHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKR 240

Query: 241 VANMLNGEPI------------------------------AYKHAIREQKLALEISAAKR 300
           VANMLNGEPI                              AYKHAIREQKLALEISAAKR
Sbjct: 241 VANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAKR 300

Query: 301 ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADF 351
           ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADF
Sbjct: 301 ERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADF 360

[Close]
BLAST of CsGy5G017710 vs. TrEMBL
Match: tr|A0A1S4E282|A0A1S4E282_CUCME (pre-rRNA-processing protein ESF2 OS=Cucumis melo OX=3656 GN=LOC103498123 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 5.7e-146
Identity = 319/381 (83.73%), Postives = 331/381 (86.88%), Query Frame = 0 

Query: 1   MSNEESSEVNLKTDCSPESRKKRAKSRKNKRKQLLIKGVDVMEMKDVGSVQLGESNMXXX 60
           MS EESSEVNL TDC+PES KKRAKSRKNK+KQLL+KGVDVMEMKDV SVQLGESN+   
Sbjct: 1   MSKEESSEVNLTTDCNPESSKKRAKSRKNKKKQLLMKGVDVMEMKDVRSVQLGESNI--- 60

Query: 61  XXXXXXXXXXXXXXXXXXXRVEESFIKDEAGEYENRAETFMKEASPVSNSGSEIFFEKRK 120
            XXXXXXXXXXXXXXXXXXR+EES IKDEAGEYENR ETFMKEASPVSNSGSE FFEKR 
Sbjct: 61  NXXXXXXXXXXXXXXXXXXRIEESSIKDEAGEYENRTETFMKEASPVSNSGSENFFEKRT 120

Query: 121 IALEDAENERTDSILRENSDGKILESDNGK-NQRKIKRKKQLLKEAANADMRGICYLSRV 180
           IALEDAENERTD+ILRE SD KILESDNGK ++RKIKRKKQLLKEAANADMRGICYLSRV
Sbjct: 121 IALEDAENERTDNILREKSDRKILESDNGKVDRRKIKRKKQLLKEAANADMRGICYLSRV 180

Query: 181 PPHMDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240
           PPHMDPL+LRQILSQ+GEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK
Sbjct: 181 PPHMDPLRLRQILSQYGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAK 240

Query: 241 RVANMLNGEPI------------------------------AYKHAIREQKLALEISAAK 300
           +VANMLNGEPI                              AYKHAIREQKLALEISAAK
Sbjct: 241 KVANMLNGEPIGGRKRSSFYYDLWNIKYLSKFKWDDLTEETAYKHAIREQKLALEISAAK 300

Query: 301 RERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVAD 351
           RERD YLAKVDKSRALNSIEERLKKKQK+REDSEMNS LDDSQKLPKLIRSFPQTQPVAD
Sbjct: 301 RERDSYLAKVDKSRALNSIEERLKKKQKLREDSEMNS-LDDSQKLPKLIRSFPQTQPVAD 360

[Close]
BLAST of CsGy5G017710 vs. TrEMBL
Match: tr|A0A200RCX4|A0A200RCX4_9MAGN (RNA recognition motif domain OS=Macleaya cordata OX=56857 GN=BVC80_1065g113 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.5e-66
Identity = 144/258 (55.81%), Postives = 182/258 (70.54%), Query Frame = 0 

Query: 123 LEDAENERTDSILRENSDGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPH 182
           + + E  ++++ L E  +  I+ +D     RK KRKK LLKE A A+ RG+CYLSR+PPH
Sbjct: 1   MTEKEQNQSETGLLEEGNEDIISNDKKVKTRKNKRKKLLLKETAKAEKRGVCYLSRIPPH 60

Query: 183 MDPLKLRQILSQHGEIQRIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVA 242
           MDPLKLR ILSQ+GEI+RIYL PED A+QV RKRAGGFRGQ FSEGWVEFT K VAKRVA
Sbjct: 61  MDPLKLRHILSQYGEIERIYLTPEDPAAQVHRKRAGGFRGQQFSEGWVEFTKKTVAKRVA 120

Query: 243 NMLNGE------------------------------PIAYKHAIREQKLALEISAAKRER 302
           +MLNGE                               IAYK+A+REQKL LEISAAKRER
Sbjct: 121 SMLNGEQIGGRKRSSFFYDIWNIKYLSKFKWDDLTDEIAYKNAVREQKLTLEISAAKRER 180

Query: 303 DFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAV 351
           DFYL+KVDKS AL+SI++R+ KKQK+++ S+ NS     ++ PK+IR FPQT+PV D + 
Sbjct: 181 DFYLSKVDKSHALSSIQQRMMKKQKVQQGSDTNSVPPAEKQEPKVIRQFPQTRPVGDNSN 240

[Close]
BLAST of CsGy5G017710 vs. TrEMBL
Match: tr|A0A2P5CTG6|A0A2P5CTG6_PARAD (Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_124190 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 145/241 (60.17%), Postives = 177/241 (73.44%), Query Frame = 0 

Query: 140 DGKILESDNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQ 199
           D  +   D+  + RKIKRK++LLKEAA AD RGICYLSR+PPHMDP KLRQILSQ G+IQ
Sbjct: 127 DENVQSHDDKADIRKIKRKRRLLKEAAEADKRGICYLSRIPPHMDPFKLRQILSQFGDIQ 186

Query: 200 RIYLAPEDAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNG------------ 259
           RIYLAPE+   Q +RKR+G F+ Q FSEGWVEF+DKRVAKRVA+MLNG            
Sbjct: 187 RIYLAPENPV-QPRRKRSGRFQEQGFSEGWVEFSDKRVAKRVADMLNGEQIGGKKRSSFY 246

Query: 260 ------------------EPIAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIE 319
                             E IAYK+A++EQKLALEISAAKRERDFYL+KVD++RAL+SIE
Sbjct: 247 YDLWNIKYLSKFKWDDLTEEIAYKNAMKEQKLALEISAAKRERDFYLSKVDQARALSSIE 306

Query: 320 ERLKKKQKMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGS 351
           ERLKKKQK++++S  N+ L  SQ+  K++R FPQ QPV D A ++KPRLS ++LAGVFG 
Sbjct: 307 ERLKKKQKLQQESGTNADLPVSQQASKVVRKFPQKQPVLDNAAESKPRLSKDILAGVFGG 366

[Close]
BLAST of CsGy5G017710 vs. TrEMBL
Match: tr|A0A2P5BCG5|A0A2P5BCG5_9ROSA (Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_325880 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.9e-65
Identity = 145/234 (61.97%), Postives = 173/234 (73.93%), Query Frame = 0 

Query: 147 DNGKNQRKIKRKKQLLKEAANADMRGICYLSRVPPHMDPLKLRQILSQHGEIQRIYLAPE 206
           D+    RKIKRK++LLKEAA AD RGICYLSR+PPHMDP KLRQILSQ G+IQRIYL PE
Sbjct: 152 DDKAGIRKIKRKRRLLKEAAEADKRGICYLSRIPPHMDPFKLRQILSQFGDIQRIYLTPE 211

Query: 207 DAASQVQRKRAGGFRGQFFSEGWVEFTDKRVAKRVANMLNG------------------- 266
           +   Q +RKR+G F+ Q FSEGWVEF+DKRVAKRVA+MLNG                   
Sbjct: 212 NPV-QPRRKRSGRFQEQGFSEGWVEFSDKRVAKRVADMLNGEQIGGRKRSSFYYDLWNIK 271

Query: 267 -----------EPIAYKHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQ 326
                      E IAYK+A+REQKLALEISAAKRERDFYL+KVD++RAL+SIEERLKKKQ
Sbjct: 272 YLSKFKWDDLTEEIAYKNAMREQKLALEISAAKRERDFYLSKVDQARALSSIEERLKKKQ 331

Query: 327 KMREDSEMNSTLDDSQKLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFGSS 351
           K++++S  N+ L  SQ+  K++R FPQ QPV D A ++KPRLS +VLAGVFG S
Sbjct: 332 KLQQESGTNADLPVSQQASKVVRKFPQKQPVLDNAAESKPRLSKDVLAGVFGGS 384

The following BLAST results are available for this feature:
BLAST of CsGy5G017710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142778.12.6e-16692.11PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis sativus] >KGN51341.1 hypoth... [more]
XP_016902333.18.7e-14683.73PREDICTED: pre-rRNA-processing protein ESF2 [Cucumis melo][more]
XP_022990094.19.7e-12167.89pre-rRNA-processing protein ESF2 [Cucurbita maxima] >XP_022990095.1 pre-rRNA-pro... [more]
XP_022922239.17.7e-11866.84pre-rRNA-processing protein ESF2 [Cucurbita moschata] >XP_022922247.1 pre-rRNA-p... [more]
XP_023528511.15.0e-11766.32pre-rRNA-processing protein ESF2 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy5G017710 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56510.12.1e-5352.73RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of CsGy5G017710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4HZ47|ESF2_GIBZE5.4e-2232.43Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620... [more]
sp|Q59YL9|ESF2_CANAL5.9e-2132.30Pre-rRNA-processing protein ESF2 OS=Candida albicans (strain SC5314 / ATCC MYA-2... [more]
sp|O74362|ESF2_SCHPO1.7e-2031.30Pre-rRNA-processing protein esf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
sp|Q6BSS5|ESF2_DEBHA2.9e-2030.13Pre-rRNA-processing protein ESF2 OS=Debaryomyces hansenii (strain ATCC 36239 / C... [more]
sp|Q2GZQ4|ESF2_CHAGB5.0e-2032.39Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain ATCC 6205 / CBS ... [more]
BLAST of CsGy5G017710 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUC2|A0A0A0KUC2_CUCSA1.7e-16692.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517890 PE=4 SV=1[more]
tr|A0A1S4E282|A0A1S4E282_CUCME5.7e-14683.73pre-rRNA-processing protein ESF2 OS=Cucumis melo OX=3656 GN=LOC103498123 PE=4 SV... [more]
tr|A0A200RCX4|A0A200RCX4_9MAGN1.5e-6655.81RNA recognition motif domain OS=Macleaya cordata OX=56857 GN=BVC80_1065g113 PE=4... [more]
tr|A0A2P5CTG6|A0A2P5CTG6_PARAD1.0e-6560.17Splicing factor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_1241... [more]
tr|A0A2P5BCG5|A0A2P5BCG5_9ROSA2.9e-6561.97Splicing factor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_325880 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR034353ABT1/ESF2_RRM
IPR000504RRM_dom
IPR039119ABT1/Esf2
IPR012677Nucleotide-bd_a/b_plait_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0000472 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0034462 small-subunit processome assembly
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G017710.1CsGy5G017710.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..158
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 117..274
e-value: 2.2E-9
score: 39.4
IPR039119ABT1/Esf2PANTHERPTHR12311FAMILY NOT NAMEDcoord: 62..253
coord: 248..347
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 172..268
score: 8.706
IPR034353ABT1/ESF2, RNA recognition motifCDDcd12263RRM_ABT1_likecoord: 172..253
e-value: 3.13314E-40
score: 137.724
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 166..250

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G017710Cla004636Watermelon (97103) v1cgybwmB339
CsGy5G017710Csa5G517890Cucumber (Chinese Long) v2cgybcuB223
CsGy5G017710MELO3C021598Melon (DHL92) v3.5.1cgybmeB300
CsGy5G017710ClCG09G019430Watermelon (Charleston Gray)cgybwcgB314
CsGy5G017710CSPI05G18030Wild cucumber (PI 183967)cgybcpiB225
CsGy5G017710Lsi02G016070Bottle gourd (USVL1VR-Ls)cgyblsiB318
CsGy5G017710Cp4.1LG01g23600Cucurbita pepo (Zucchini)cgybcpeB627
CsGy5G017710MELO3C021598.2Melon (DHL92) v3.6.1cgybmedB300
CsGy5G017710CsaV3_5G026950Cucumber (Chinese Long) v3cgybcucB232
CsGy5G017710Cla97C09G180890Watermelon (97103) v2cgybwmbB389
CsGy5G017710Bhi06G000493Wax gourdcgybwgoB448
CsGy5G017710Carg04475Silver-seed gourdcarcgybB0685
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G017710Cucurbita maxima (Rimu)cgybcmaB586
CsGy5G017710Cucurbita maxima (Rimu)cgybcmaB596
CsGy5G017710Cucurbita maxima (Rimu)cgybcmaB610
CsGy5G017710Cucurbita maxima (Rimu)cgybcmaB649
CsGy5G017710Cucurbita moschata (Rifu)cgybcmoB558
CsGy5G017710Cucurbita moschata (Rifu)cgybcmoB567
CsGy5G017710Cucurbita moschata (Rifu)cgybcmoB585
CsGy5G017710Cucurbita moschata (Rifu)cgybcmoB626
CsGy5G017710Cucurbita pepo (Zucchini)cgybcpeB599
CsGy5G017710Cucurbita pepo (Zucchini)cgybcpeB676
CsGy5G017710Cucurbita pepo (Zucchini)cgybcpeB681
CsGy5G017710Silver-seed gourdcarcgybB0281
CsGy5G017710Silver-seed gourdcarcgybB0378
CsGy5G017710Silver-seed gourdcarcgybB0447