MELO3C021510.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021510.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Ferredoxin-thioredoxin reductase catalytic chain
Location	chr09 : 2882431 .. 2884719 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGCATCCTTCAGAAAATTCACTTCTATCAATCATCTTCATCTCCCTAATTCAACATTCTTTCACCCAAACAAAACAGAAAAACTTTAAACAACTCCACAAGATCCTAATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATGTTCTCGTCACCGCCATGTTGTACGAGCTCAAGGTAACTATAGTTCAATTTCTTGAAACAGATTGTAAATCTTCTATTTCTCTGTTAATTGATTGATGTAGAGGAAATTGTTTCTTGTTATTTCAGCGGAACCGTCCGAGAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGTTCTTTTCTCAGATTTTACTTCTGGTATTAATTAATATCCAATTGTTGTTTATTCATTGAATTTCATTTTTTTTTTCCTGCTTTGGTTCTTTCTTTAGTAATGAAGTTGCTTGAGTGTTTTAGATGATTGTGTTTATCTGTTGACGTTTGTGGAAACATCTCATTGATCAATCGTAATTGGTTGATAAGTTCTCTTCATGAACAACAATTTTTTAGTTAGTGAAGCAGTTGAATATAAGAAACTTAGATATGTCTGTGCTCTCATAGGTGGATGTTAACTTGAATAAAATTTGTTTGCCTACTGCGGTCGTTTAAGGGATTTTCTTGACATTGCTGATGATGAATCGTAGCTTTTAGTTATACTATTGGAAGTTGATTTACTAGCTTAACTTGAGATATTGCTTGTAAATTTTGTGGACTTACCTTGTTGGAATTGTGGATTTCTTTTATTTGATTATTTCTTTAGTGGTACCTTTTATTAATTGATTGAATGTCGTTGATCTGTAATTAGTGTAAGAGAAGCTCATGTTAGATCTAAACAGGGACTGGCAGATCACAAAGATACATTGGGAGCACCACTTTGTCCTTGTCGGTCAGTGTTTCTCACTTGAACTAATGGTGGTTCAAACATTCTTTAGTGAAAATTCAAATAGTTTGATGATTTTTTTTGCAGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGGTATAATATGTACTTATAGCTAATGAATGATGTGTAAAAAATGTTAAAAGGTAGCATTAGGAAATTCATTTTTCCTGACTGGAATTCGTAAAATCATAGGCATGTCTCACTGACTTATACGTTATAAACTTAAACTTTGCTGTCACTTTAATTATCGACTGACTCAATCTTCTGCATTATGATTATTCAGCTTGATAAGATTTGACCTTATAAATTAGGAAGGAAAAGAGGAAGTGGTGGGAGTTTATCGAGATGCACCTTATTTTAATTTAATCTTTGAAGCTATCAGTGCTAAGATTTACATTTTTAGGTTATTGAACTTGAGAGGAAATACCTCTTCCGTAGCTAACCATTTCGCACATGAAGAGTAGGGGTTTACATTCATGAAGTGGCTTAGAATTATTCCCATGGTAGATGTTCACTTTAGCAAGGTGGTTTTTAGGTTGGTTTTGTGTTATTTCATAAAGGAAAGTTACTATTTATCCCAAGAATAATGTGGTAGCTGGCTGGTGTTTAAGGAAGCACCGAAATGCGAACACTATCGTTTTTATTCCATATAAGACGCATGTGGTCTGAAAATTAAGTCTTTCTTGGCAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGTAATTCTTGTCGATTAATCTTGACCTCATAGGTTGACCCCGCTACTTATTATTTATTTAGTTTTCATATGTTGAAATTATCCACGGTTCCAATTATCAGTAATTCTTTCATGTTCTCGCTTGATTTTAAAAAAAAAAAATTCATTCCTCTTTTGTGTAGGCAATCTCCTTGGAAGATATCAGGGCAACAACAGCAAACATGTAACCCCTAATTACCACTTGTTATTTTTCATTGAACAGTAATTCATATTGTGGTTATGGCTAAAACAGGTGGAAGTATACAAGTATTGAATGAATGTGTATGTAACAGTAACTCTATATGCTGATGAGATAATGAATGGTTTTCCCATATCTCCTTCCGACAAATGATTGAATTTCTTTTCTGTGAATGCAAATACGGTGCATTTAGATTGACTTTATAAGACTTTATAAACACTTGTAAAGTCAATTTAAAGACATATTGAATCTCCTTTTG

mRNA sequence

AATGGCATCCTTCAGAAAATTCACTTCTATCAATCATCTTCATCTCCCTAATTCAACATTCTTTCACCCAAACAAAACAGAAAAACTTTAAACAACTCCACAAGATCCTAATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATGTTCTCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCGTCCGAGAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACATTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCCTTGGAAGATATCAGGGCAACAACAGCAAACATGTAACCCCTAATTACCACTTGTTATTTTTCATTGAACAGTAATTCATATTGTGGTTATGGCTAAAACAGGTGGAAGTATACAAGTATTGAATGAATGTGTATGTAACAGTAACTCTATATGCTGATGAGATAATGAATGGTTTTCCCATATCTCCTTCCGACAAATGATTGAATTTCTTTTCTGTGAATGCAAATACGGTGCATTTAGATTGACTTTATAAGACTTTATAAACACTTGTAAAGTCAATTTAAAGACATATTGAATCTCCTTTTG

Coding sequence (CDS)

TGGCATCCTTCAGAAAATTCACTTCTATCAATCATCTTCATCTCCCTAATTCAACATTCTTTCACCCAAACAAAACAGAAAAACTTTAAACAACTCCACAAGATCCTAATGATTCTACAAGCTTCATCCTTCAATATCGCCGTTCCACTCTCCGGTTCCTCCCTCGGATGTTCTCGTCACCGCCATGTTGTACGAGCTCAAGCGGAACCGTCCGAGAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGTAAGTCAGGAACGTATTTCTGTGTAGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACATTGGGAGCACCACTTTGTCCTTGTCGGCATTATGATGACAAACCTGCTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTGCCAATGAGAGAGAGGAAAGAGTGTCACTGCATGCTTTTCCTGACTCCGGAAAATGACTTTGCCGGCAATGATCAGGCAATCTCCTTGGAAGATATCAGGGCAACAACAGCAAACATGTAA

Protein sequence

WHPSENSLLSIIFISLIQHSFTQTKQKNFKQLHKILMILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQAISLEDIRATTANM

Homology

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BLAST of MELO3C021510.2 vs. NCBI nr
Match: XP_008458720.1 (PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 3.6e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

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BLAST of MELO3C021510.2 vs. NCBI nr
Match: XP_004142346.1 (PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus] >KGN52404.1 hypothetical protein Csa_5G631540 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

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BLAST of MELO3C021510.2 vs. NCBI nr
Match: XP_022939771.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata] >XP_022993680.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima] >XP_023550763.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 140/144 (97.22%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MI QASSFNIAVPLSGS LG SRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MIPQASSFNIAVPLSGSPLGHSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAG DQAISLEDIRATTANM
Sbjct: 121 PENDFAGTDQAISLEDIRATTANM 144

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BLAST of MELO3C021510.2 vs. NCBI nr
Match: XP_022989856.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MILQASSFNIAVPLSGSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAGNDQ I+LEDI+ATTANM
Sbjct: 121 PENDFAGNDQVITLEDIKATTANM 144

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BLAST of MELO3C021510.2 vs. NCBI nr
Match: XP_022923802.1 (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MILQASSFNIAVPLSGSS G SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSTGRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAGNDQ I++EDI+ATTANM
Sbjct: 121 PENDFAGNDQVITMEDIKATTANM 144

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BLAST of MELO3C021510.2 vs. TAIR10
Match: AT2G04700.1 (ferredoxin thioredoxin reductase catalytic beta chain family protein)

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-59
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 37  MILQA--SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFC 96
           M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFC
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRRFVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFC 60

Query: 97  VDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLF 156
           VDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QGFWNCPCVPMRERKECHCMLF
Sbjct: 61  VDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLF 120

Query: 157 LTPENDFAGNDQAISLEDIRATTANM 181
           LTP+NDFAG DQ I+ ++I+ TTANM
Sbjct: 121 LTPDNDFAGKDQTITSDEIKETTANM 146

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BLAST of MELO3C021510.2 vs. Swiss-Prot
Match: sp|O49856|FTRC_SOYBN (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max OX=3847 GN=FTRC PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.3e-64
Identity = 115/144 (79.86%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           M  QAS+F +AVP   +     R+  VVRAQAEPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           P+NDFAGN+Q I+L++I+ +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]

BLAST of MELO3C021510.2 vs. Swiss-Prot
Match: sp|Q9SJ89|FTRC_ARATH (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTRC PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.1e-58
Identity = 108/146 (73.97%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 37  MILQA--SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFC 96
           M LQA   SF       G +   S  R V+RA+ EPSEKSVEIMRKFSEQYAR+SGTYFC
Sbjct: 1   MNLQAVSCSFGFLSSPLGVTPRTSFRRFVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFC 60

Query: 97  VDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLF 156
           VDKGVT+VVIKGLA+HKD+ GAPLCPCRHYDDK AEV QGFWNCPCVPMRERKECHCMLF
Sbjct: 61  VDKGVTSVVIKGLAEHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLF 120

Query: 157 LTPENDFAGNDQAISLEDIRATTANM 181
           LTP+NDFAG DQ I+ ++I+ TTANM
Sbjct: 121 LTPDNDFAGKDQTITSDEIKETTANM 146

[Close]

BLAST of MELO3C021510.2 vs. Swiss-Prot
Match: sp|P41348|FTRC1_SPIOL (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea OX=3562 GN=FTRC PE=1 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-57
Identity = 99/139 (71.22%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 42  SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTA 101
           +S   + P+S  +    R   V+RAQA+PS+KS+E+MRKFSEQ+ RKS TYFCVDK VTA
Sbjct: 6   ASIAYSFPISSPAASPRRFSRVIRAQADPSDKSMEVMRKFSEQFCRKSDTYFCVDKSVTA 65

Query: 102 VVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDF 161
           VVIKGLADH+DTLGAPLCPCRHYDDK AE  QGFWNCPCVPMRERKECHCMLFLTP+NDF
Sbjct: 66  VVIKGLADHRDTLGAPLCPCRHYDDKEAEAKQGFWNCPCVPMRERKECHCMLFLTPDNDF 125

Query: 162 AGNDQAISLEDIRATTANM 181
           AG +Q I+L++IR  T+NM
Sbjct: 126 AGKEQTITLDEIREVTSNM 144

[Close]

BLAST of MELO3C021510.2 vs. Swiss-Prot
Match: sp|P41349|FTRC2_SPIOL (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.5e-57
Identity = 107/145 (73.79%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 39  LQAS-SFNIAVPLSGSSLGCSRHRH--VVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCV 98
           LQAS S++     S ++L    HR   V+ ++ EPS+KSVEIMRKFSEQYARKSGTYFCV
Sbjct: 4   LQASTSYSFFSKSSSATLQRRTHRPQCVILSKVEPSDKSVEIMRKFSEQYARKSGTYFCV 63

Query: 99  DKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFL 158
           DKGVT+VVIKGLA+HKD+LGAPLCPCR+YDDK AE  QGFWNCPCVPMRERKECHCMLFL
Sbjct: 64  DKGVTSVVIKGLAEHKDSLGAPLCPCRYYDDKAAEATQGFWNCPCVPMRERKECHCMLFL 123

Query: 159 TPENDFAGNDQAISLEDIRATTANM 181
           TPENDFAG DQ I L++IR  TANM
Sbjct: 124 TPENDFAGKDQTIGLDEIREVTANM 148

[Close]

BLAST of MELO3C021510.2 vs. Swiss-Prot
Match: sp|P41347|FTRC_MAIZE (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays OX=4577 GN=FTRC PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 100/134 (74.63%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 49  PLSGSSLGCSRHRHVVRAQA----EPSEKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVI 108
           PLS ++ G  R R  VRAQA      ++KSVE+MRKFSEQYAR+S T+FC DK VTAVVI
Sbjct: 18  PLSTATRGRPR-RCAVRAQAAGADASNDKSVEVMRKFSEQYARRSNTFFCADKTVTAVVI 77

Query: 109 KGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGN 168
           KGLADH+DTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLTP+NDFAG 
Sbjct: 78  KGLADHRDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPDNDFAGK 137

Query: 169 DQAISLEDIRATTA 179
           DQ IS E+I+  T+
Sbjct: 138 DQVISFEEIKEATS 150

[Close]

BLAST of MELO3C021510.2 vs. TrEMBL
Match: tr|A0A1S3C819|A0A1S3C819_CUCME (Ferredoxin-thioredoxin reductase, catalytic chain OS=Cucumis melo OX=3656 GN=LOC103498045 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.4e-79
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]

BLAST of MELO3C021510.2 vs. TrEMBL
Match: tr|A0A0A0KTZ8|A0A0A0KTZ8_CUCSA (Ferredoxin-thioredoxin reductase, catalytic chain OS=Cucumis sativus OX=3659 GN=Csa_5G631540 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           MILQASSFNIAVPL GSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAGNDQAISLEDIRATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]

BLAST of MELO3C021510.2 vs. TrEMBL
Match: tr|A0A2I4EUT1|A0A2I4EUT1_9ROSI (Ferredoxin-thioredoxin reductase, catalytic chain OS=Juglans regia OX=51240 GN=LOC108992882 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.4e-63
Identity = 119/148 (80.41%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 37  MILQA----SSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTY 96
           M LQA    SSF + +P   S LG SRHR VVRA+ EPS+KSVEIMRKFSEQYARKSGTY
Sbjct: 1   MTLQAQASSSSFAVGIPSFTSPLGGSRHRLVVRAKVEPSDKSVEIMRKFSEQYARKSGTY 60

Query: 97  FCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCM 156
           FCVDKGVT+VVIKGLADHKD+LGAPLCPCRHYDDKPAE  QGFWNCPCVPMRERKECHCM
Sbjct: 61  FCVDKGVTSVVIKGLADHKDSLGAPLCPCRHYDDKPAEAGQGFWNCPCVPMRERKECHCM 120

Query: 157 LFLTPENDFAGNDQAISLEDIRATTANM 181
           LFLTP+NDFAG +Q ISLE+IR +TANM
Sbjct: 121 LFLTPDNDFAGKEQTISLEEIRESTANM 148

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BLAST of MELO3C021510.2 vs. TrEMBL
Match: tr|M5WRL3|M5WRL3_PRUPE (Ferredoxin-thioredoxin reductase, catalytic chain OS=Prunus persica OX=3760 GN=PRUPE_3G278500 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.3e-63
Identity = 116/142 (81.69%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 39  LQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKG 98
           LQA SF +++    S L  S HRHV+RAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKG
Sbjct: 5   LQAPSFRVSISSFVSPLRRSTHRHVIRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVDKG 64

Query: 99  VTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLTPE 158
           VT+VVIKGLADHKD+LGAPLCPCRHYDDKPAE  QGFWNCPCVPMRERKECHCMLFLT +
Sbjct: 65  VTSVVIKGLADHKDSLGAPLCPCRHYDDKPAEAGQGFWNCPCVPMRERKECHCMLFLTSD 124

Query: 159 NDFAGNDQAISLEDIRATTANM 181
           NDFAG +Q ISLE+IR +TANM
Sbjct: 125 NDFAGPEQTISLEEIRESTANM 146

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BLAST of MELO3C021510.2 vs. TrEMBL
Match: tr|I3S4G0|I3S4G0_LOTJA (Ferredoxin-thioredoxin reductase, catalytic chain OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.1e-63
Identity = 116/144 (80.56%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 37  MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 96
           M  QA SF + VP   S L   R+ HVVRAQ EPSEKS+EIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTSQACSFAVTVPSVASPLRRHRNLHVVRAQVEPSEKSIEIMRKFSEQYARKSGTYFCVD 60

Query: 97  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 156
           K VT+VVIKGLADHKD+LGAPLCPCRHYDDKPAE  QGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KSVTSVVIKGLADHKDSLGAPLCPCRHYDDKPAEAQQGFWNCPCVPMRERKECHCMLFLT 120

Query: 157 PENDFAGNDQAISLEDIRATTANM 181
           PENDFAG +QAI+L++IR TTANM
Sbjct: 121 PENDFAGKEQAITLDEIRETTANM 144

The following BLAST results are available for this feature:

BLAST of MELO3C021510.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458720.1	3.6e-79	100.00	PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucu...	[more]
XP_004142346.1	1.8e-78	99.31	PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucu...	[more]
XP_022939771.1	1.1e-75	97.22	ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita ...	[more]
XP_022989856.1	1.3e-73	93.75	ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita ...	[more]
XP_022923802.1	2.3e-73	93.06	ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita ...	[more]

BLAST of MELO3C021510.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04700.1	2.3e-59	73.97	ferredoxin thioredoxin reductase catalytic beta chain family protein	[more]

BLAST of MELO3C021510.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O49856\|FTRC_SOYBN	1.3e-64	79.86	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max O...	[more]
sp\|Q9SJ89\|FTRC_ARATH	4.1e-58	73.97	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis t...	[more]
sp\|P41348\|FTRC1_SPIOL	3.5e-57	71.22	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oler...	[more]
sp\|P41349\|FTRC2_SPIOL	3.5e-57	73.79	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oler...	[more]
sp\|P41347\|FTRC_MAIZE	3.0e-53	74.63	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays OX=4...	[more]

BLAST of MELO3C021510.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C819\|A0A1S3C819_CUCME	2.4e-79	100.00	Ferredoxin-thioredoxin reductase, catalytic chain OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0KTZ8\|A0A0A0KTZ8_CUCSA	1.2e-78	99.31	Ferredoxin-thioredoxin reductase, catalytic chain OS=Cucumis sativus OX=3659 GN=...	[more]
tr\|A0A2I4EUT1\|A0A2I4EUT1_9ROSI	2.4e-63	80.41	Ferredoxin-thioredoxin reductase, catalytic chain OS=Juglans regia OX=51240 GN=L...	[more]
tr\|M5WRL3\|M5WRL3_PRUPE	5.3e-63	81.69	Ferredoxin-thioredoxin reductase, catalytic chain OS=Prunus persica OX=3760 GN=P...	[more]
tr\|I3S4G0\|I3S4G0_LOTJA	9.1e-63	80.56	Ferredoxin-thioredoxin reductase, catalytic chain OS=Lotus japonicus OX=34305 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors

Vocabulary: **INTERPRO**
Term	Definition
IPR004209	FTR_bsu
IPR036644	FTR_bsu_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0030386	ferredoxin:thioredoxin reductase complex
molecular_function	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0030385	ferredoxin:thioredoxin reductase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021510.2.1	MELO3C021510.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036644	Ferredoxin thioredoxin reductase catalytic beta subunit superfamily	GENE3D	G3DSA:3.90.460.10		coord: 66..180 e-value: 2.7E-55 score: 187.2
IPR036644	Ferredoxin thioredoxin reductase catalytic beta subunit superfamily	SUPERFAMILY	SSF57662	Ferredoxin thioredoxin reductase (FTR), catalytic beta chain	coord: 72..177
IPR004209	Ferredoxin thioredoxin reductase catalytic beta subunit	PFAM	PF02943	FeThRed_B	coord: 75..174 e-value: 1.6E-40 score: 137.3
IPR004209	Ferredoxin thioredoxin reductase catalytic beta subunit	PANTHER	PTHR35113	FAMILY NOT NAMED	coord: 65..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021510.2	Csa5G631540	Cucumber (Chinese Long) v2	cumedB337
MELO3C021510.2	CSPI05G28400	Wild cucumber (PI 183967)	cpimedB339
MELO3C021510.2	Cucsa.158840	Cucumber (Gy14) v1	cgymedB265
MELO3C021510.2	CmaCh04G027270	Cucurbita maxima (Rimu)	cmamedB720
MELO3C021510.2	CmoCh04G028580	Cucurbita moschata (Rifu)	cmomedB713
MELO3C021510.2	Lsi02G015370	Bottle gourd (USVL1VR-Ls)	lsimedB171
MELO3C021510.2	Cp4.1LG01g23140	Cucurbita pepo (Zucchini)	cpemedB418
MELO3C021510.2	CsGy5G027730	Cucumber (Gy14) v2	cgybmedB299
MELO3C021510.2	Cla010377	Watermelon (97103) v1	medwmB001
MELO3C021510.2	ClCG09G018640	Watermelon (Charleston Gray)	medwcgB000
MELO3C021510.2	Cla97C09G180120	Watermelon (97103) v2	medwmbB034
MELO3C021510.2	Bhi06G000398	Wax gourd	medwgoB020
MELO3C021510.2	Carg04414	Silver-seed gourd	carmedB0694
MELO3C021510.2	Carg02279	Silver-seed gourd	carmedB0270
MELO3C021510.2	CsaV3_5G037480	Cucumber (Chinese Long) v3	cucmedB350

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021510.2	Cucurbita maxima (Rimu)	cmamedB285
MELO3C021510.2	Cucurbita moschata (Rifu)	cmomedB271
MELO3C021510.2	Cucurbita pepo (Zucchini)	cpemedB182
MELO3C021510.2	Watermelon (Charleston Gray)	medwcgB002