Cp4.1LG01g23140 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g23140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFerredoxin-thioredoxin reductase catalytic chain
LocationCp4.1LG01 : 19771618 .. 19774450 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAACAAAGAACTATGAACAAATCCACAGATTATCCTTCTTCTTCCTCCTCCCAATTTACAGATTTCTTCTCTTCCTCGTTTTCCGTTGCTTTGTCCTAATGATTCTACAAGCGTCGTCGTTCAATATCGTCGTTCCACTCTCCGGTTCTTCCCGCGTTCGTTCCCGTCACAGCCATGTCGTTCGAGCTCAAGGTAATTATATAGCCGGTTTTTTAAACTGATTCTAAATCTCGTTTTACTGTTGTATGGAATTTATCTTTTCAAATCGCGACATTCTAGCGCCAATTTTTGTTTGCTGTATCTTTCTCTGTGGATTCATTTAGATGTCCAACAACAAAGTTGTTCTTCTTGTTATTGTTCCTGTCTACCGCTTTTGGATATAGATAATTCGAATGTAATTTTTTTGTTACTTCAGGGGAACCGTCCGACAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGCAAGTCAGGAACGTATTTCTGTGTGGACAAGGGGGTTACTGCTGTTGTAATCAAGGTTATTTTCTGAGATTTTCTTGTGGTGTTATTTCCGTTACTTATAAATGGAATTTTCATTTTTCTGTCTTATTTCTGTAGTCATGAAGTTGTTTGAGTGGCTTACATGATTGTGTTTTATCTGTTGACCTTTATGGAACATCTCATTGATTGCACGCAAGGAATTGATAGGTTTTCTAGTTACTCGTTCTCAAATTGAGCAATTATTTATTAGTTTGTAAAGCAATAGAGGAGAAGAAACTTTGATAGGTCTGTGCTCCCGAAGGTAGACGATAACTTTAAGGAAATTTGATTACCTATATTCTTTGGAAATATTTTTTCTTGACATTGCTGATAAAGTTCATGATGGAAGAGTTTAGTTTTACTGTGGCAAGTTGATTGCATAAGTTCCAGAAGTTTATAACTCGATGAACCTGTACTAATGGATCTTTGTTTTTAGTCTCCATTATGTTTATGGGTACAGTTGTATCGACATTAGATGAAATTTATTGAATGTCGTTGATCTGTAACTAGTGTAAGAGAAGCTCATATTAGATCTAAACAGGGACTGGCAGATCACAAAGATACATTGGGTGCACCACTCTGTCCCTGTCGGTCAGTGTTTATAATGCTTTGTAGAAATCGTGTAATATTTTCTGGAACTAATGGTAGTTCAAACTATCTTTAATTCAGAGTTAAATAGTTTGGTTATTTTTTTTCAGGCATTATGATGACAAAGCTGCTGAGGTTGCACAAGGTTTTTGGAATTGTCCATGTGTTCCAATGAGAGAAAGGTAAAATATGCACTTATATCATCGGGAAGTTTCTTTTTTGCGATCTGGAATTCATGAAACTATATACCTGCCTGTCTGCATTATACTCATAAAACGTTTCTCACTTGATTTATTGACTGACTGAATGATCTGCATTAGGATGATTCGGCTTTATAAGTCTTTATTCTTATGAAAGAGGAAGGAAAAGAGAAGGGGTGGGAGATTATGGCTATCCATTTTAATTTGTTTCTTAAGATGATGGGTGTTGAGATTTACAGTACTAGGTTATTAAACTTGGAAGTAAATACCTTGAGCCCTATACTGATTTTTCGCGGATGAAGAGCAGGGTTTAAATCTTTCATAAACTGACTTTGTTAGAACTATTTCCCATGGTCAGCTGGTAAACTAAATTTGTAGTCGGTTAGTCACACATAACCAAGCTGTTCACTCTAGCGAGTAAGGTTGTTTTTGTGTTATATTCGATACCAGGAAAATGGTAATAACAGGCTGACTTTCAAAGCCCTTGGATATTGGAATGTTTCAGGAAACAAGGAAATGTAGATGATAGGACGCTGTTACTCATCTTATTCCATATCAGGCACATCTGGTCTGAAAATTAATTTTTTCTTGGCAGGAAAGAGTGTCACTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCAGGCAACGACCAGGTAATTGTTATCAGTTACTCTTGATCTGAAAGATTATACTGATACTTCTAATTCATGGAAAGAATCTCAATGTAATGACTACAGACTGAATGACAATTCAATTTACCGGAAGGTGTATGGTTTATTGTTAGACACTATTACCACTCCAGAATGCAACTGAATTTTCTTATTAATTTCATTAACAAGCTCCACTCCTTGAACACTATGCTAGATGTGAAGTTGGGAATTGTCACAAGTTCTTTTAGCCGGAAAAAATTGAATATTAAGCTAAACTGCAAATATTATGGCTATTTACTTTGCATATGTTGCAACTATCCATTGTTTCTGTTGTGAATACTTTTTTCCTGGTCTCGTTGGATTTCTGATTCCTCTTTTCTGTAGGTGATCACCATGGAAGATATCAAGGCAACAACAGCAAACATGTAACCTTCAATTTCCACTTGTTAATTTCATTCACAGTACTTCATACTGTGCTATGATGATTGAAAGGGGTGGAAATATACAAGTATAATTATGTATGTAACACTACATGCTGATGAGATCATGAATTGTTGTGCCATATCTGCCACTGACAAATGATTACATTTCTTTTCCATGGTATTTGTAACATGTAAGTTTTGACCTTTGGCTTAGTTTGGCTAGAACCATACATGGATGGGTGTTTTGGGAGAGGATCCAATGCAGGAGTGGTTAGTGGTGAAAAATATGAGTTAGGAGAAAGAACCCTATATGGATAGGTATTCCTTTTCGGGTTATTAGAGGTTTGAATTTGCATACTCCATACCTTTTCCTTTTACTTTCGAGATGAGCGATTGGAAAAGTAATAATAATTATAATCAATAAAGATGTTGCTATT

mRNA sequence

CAAAAACAAAGAACTATGAACAAATCCACAGATTATCCTTCTTCTTCCTCCTCCCAATTTACAGATTTCTTCTCTTCCTCGTTTTCCGTTGCTTTGTCCTAATGATTCTACAAGCGTCGTCGTTCAATATCGTCGTTCCACTCTCCGGTTCTTCCCGCGTTCGTTCCCGTCACAGCCATGTCGTTCGAGCTCAAGGGGAACCGTCCGACAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGCAAGTCAGGAACGTATTTCTGTGTGGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACATTGGGTGCACCACTCTGTCCCTGTCGGCATTATGATGACAAAGCTGCTGAGGTTGCACAAGGTTTTTGGAATTGTCCATGTGTTCCAATGAGAGAAAGGAAAGAGTGTCACTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCAGGCAACGACCAGGTGATCACCATGGAAGATATCAAGGCAACAACAGCAAACATGTAACCTTCAATTTCCACTTGTTAATTTCATTCACAGTACTTCATACTGTGCTATGATGATTGAAAGGGGTGGAAATATACAAGTATAATTATGTATGTAACACTACATGCTGATGAGATCATGAATTGTTGTGCCATATCTGCCACTGACAAATGATTACATTTCTTTTCCATGGTATTTGTAACATGTAAGTTTTGACCTTTGGCTTAGTTTGGCTAGAACCATACATGGATGGGTGTTTTGGGAGAGGATCCAATGCAGGAGTGGTTAGTGGTGAAAAATATGAGTTAGGAGAAAGAACCCTATATGGATAGGTATTCCTTTTCGGGTTATTAGAGGTTTGAATTTGCATACTCCATACCTTTTCCTTTTACTTTCGAGATGAGCGATTGGAAAAGTAATAATAATTATAATCAATAAAGATGTTGCTATT

Coding sequence (CDS)

ATGATTCTACAAGCGTCGTCGTTCAATATCGTCGTTCCACTCTCCGGTTCTTCCCGCGTTCGTTCCCGTCACAGCCATGTCGTTCGAGCTCAAGGGGAACCGTCCGACAAGTCGGTCGAAATAATGAGGAAATTCTCGGAGCAGTATGCTCGCAAGTCAGGAACGTATTTCTGTGTGGACAAGGGGGTTACTGCTGTTGTAATCAAGGGACTGGCAGATCACAAAGATACATTGGGTGCACCACTCTGTCCCTGTCGGCATTATGATGACAAAGCTGCTGAGGTTGCACAAGGTTTTTGGAATTGTCCATGTGTTCCAATGAGAGAAAGGAAAGAGTGTCACTGCATGCTTTTCCTAACTCCTGAGAACGACTTTGCAGGCAACGACCAGGTGATCACCATGGAAGATATCAAGGCAACAACAGCAAACATGTAA

Protein sequence

MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQVITMEDIKATTANM
Homology
[Close]
BLAST of Cp4.1LG01g23140 vs. Swiss-Prot
Match: FTRC_SOYBN (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max GN=FTRC PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 9.3e-66
Identity = 117/144 (81.25%), Postives = 128/144 (88.89%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +   R R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. Swiss-Prot
Match: FTRC_ARATH (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis thaliana GN=FTRC PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-58
Identity = 105/132 (79.55%), Postives = 116/132 (87.88%), Query Frame = 1 

Query: 13  PLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLA 72
           PL  + R   R   V+RA+ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA
Sbjct: 16  PLGVTPRTSFRR-FVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFCVDKGVTSVVIKGLA 75

Query: 73  DHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQVI 132
           +HKD+ GAPLCPCRHYDDKAAEV QGFWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I
Sbjct: 76  EHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQTI 135

Query: 133 TMEDIKATTANM 145
           T ++IK TTANM
Sbjct: 136 TSDEIKETTANM 146

[Close]
BLAST of Cp4.1LG01g23140 vs. Swiss-Prot
Match: FTRC1_SPIOL (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea GN=FTRC PE=1 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-57
Identity = 98/132 (74.24%), Postives = 113/132 (85.61%), Query Frame = 1 

Query: 13  PLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLA 72
           P+S  +    R S V+RAQ +PSDKS+E+MRKFSEQ+ RKS TYFCVDK VTAVVIKGLA
Sbjct: 13  PISSPAASPRRFSRVIRAQADPSDKSMEVMRKFSEQFCRKSDTYFCVDKSVTAVVIKGLA 72

Query: 73  DHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQVI 132
           DH+DTLGAPLCPCRHYDDK AE  QGFWNCPCVPMRERKECHCMLFLTP+NDFAG +Q I
Sbjct: 73  DHRDTLGAPLCPCRHYDDKEAEAKQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKEQTI 132

Query: 133 TMEDIKATTANM 145
           T+++I+  T+NM
Sbjct: 133 TLDEIREVTSNM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. Swiss-Prot
Match: FTRC2_SPIOL (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 7.9e-57
Identity = 102/132 (77.27%), Postives = 114/132 (86.36%), Query Frame = 1 

Query: 17  SSRVRSRHSH----VVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLA 76
           SS    R +H    V+ ++ EPSDKSVEIMRKFSEQYARKSGTYFCVDKGVT+VVIKGLA
Sbjct: 17  SSATLQRRTHRPQCVILSKVEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTSVVIKGLA 76

Query: 77  DHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQVI 136
           +HKD+LGAPLCPCR+YDDKAAE  QGFWNCPCVPMRERKECHCMLFLTPENDFAG DQ I
Sbjct: 77  EHKDSLGAPLCPCRYYDDKAAEATQGFWNCPCVPMRERKECHCMLFLTPENDFAGKDQTI 136

Query: 137 TMEDIKATTANM 145
            +++I+  TANM
Sbjct: 137 GLDEIREVTANM 148

[Close]
BLAST of Cp4.1LG01g23140 vs. Swiss-Prot
Match: FTRC_MAIZE (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays GN=FTRC PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.7e-55
Identity = 103/136 (75.74%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 11  VVPLSGSSRVRSRHSHVVRAQGE----PSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAV 70
           V PLS ++R R R    VRAQ       +DKSVE+MRKFSEQYAR+S T+FC DK VTAV
Sbjct: 16  VRPLSTATRGRPRRC-AVRAQAAGADASNDKSVEVMRKFSEQYARRSNTFFCADKTVTAV 75

Query: 71  VIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFA 130
           VIKGLADH+DTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTP+NDFA
Sbjct: 76  VIKGLADHRDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPDNDFA 135

Query: 131 GNDQVITMEDIKATTA 143
           G DQVI+ E+IK  T+
Sbjct: 136 GKDQVISFEEIKEATS 150

[Close]
BLAST of Cp4.1LG01g23140 vs. TrEMBL
Match: A0A0A0KTZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G631540 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-71
Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNI VPL GSS   SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           PENDFAGNDQ I++EDI+ATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. TrEMBL
Match: A0A0R0GWL3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G069100 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-63
Identity = 117/144 (81.25%), Postives = 128/144 (88.89%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +   R R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. TrEMBL
Match: A0A0B2PVY0_GLYSO (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine soja GN=glysoja_016452 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.0e-63
Identity = 117/144 (81.25%), Postives = 128/144 (88.89%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +   R R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. TrEMBL
Match: I1N5X5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G013800 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.8e-63
Identity = 116/144 (80.56%), Postives = 127/144 (88.19%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +     R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVTTPFRSHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. TrEMBL
Match: A0A0B2Q8T3_GLYSO (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine soja GN=glysoja_041443 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.8e-63
Identity = 116/144 (80.56%), Postives = 127/144 (88.19%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +     R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVTTPFRSHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. TAIR10
Match: AT2G04700.1 (AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein)

HSP 1 Score: 227.3 bits (578), Expect = 6.2e-60
Identity = 105/132 (79.55%), Postives = 116/132 (87.88%), Query Frame = 1 

Query: 13  PLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVDKGVTAVVIKGLA 72
           PL  + R   R   V+RA+ EPS+KSVEIMRKFSEQYAR+SGTYFCVDKGVT+VVIKGLA
Sbjct: 16  PLGVTPRTSFRR-FVIRAKTEPSEKSVEIMRKFSEQYARRSGTYFCVDKGVTSVVIKGLA 75

Query: 73  DHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLTPENDFAGNDQVI 132
           +HKD+ GAPLCPCRHYDDKAAEV QGFWNCPCVPMRERKECHCMLFLTP+NDFAG DQ I
Sbjct: 76  EHKDSYGAPLCPCRHYDDKAAEVGQGFWNCPCVPMRERKECHCMLFLTPDNDFAGKDQTI 135

Query: 133 TMEDIKATTANM 145
           T ++IK TTANM
Sbjct: 136 TSDEIKETTANM 146

[Close]
BLAST of Cp4.1LG01g23140 vs. NCBI nr
Match: gi|659117658|ref|XP_008458720.1| (PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 6.7e-72
Identity = 132/144 (91.67%), Postives = 136/144 (94.44%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNI VPLSGSS   SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLSGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           PENDFAGNDQ I++EDI+ATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. NCBI nr
Match: gi|449449186|ref|XP_004142346.1| (PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.3e-71
Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           MILQASSFNI VPL GSS   SRH HVVRAQ EPS+KSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MILQASSFNIAVPLYGSSLGCSRHRHVVRAQAEPSEKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVTAVVIKGLADHKDTLGAPLCPCRHYDDK AEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKPAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           PENDFAGNDQ I++EDI+ATTANM
Sbjct: 121 PENDFAGNDQAISLEDIRATTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. NCBI nr
Match: gi|407971016|ref|NP_001236326.1| (ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Glycine max])

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63
Identity = 117/144 (81.25%), Postives = 128/144 (88.89%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +   R R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. NCBI nr
Match: gi|734363080|gb|KHN16349.1| (Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Glycine soja])

HSP 1 Score: 247.7 bits (631), Expect = 1.3e-62
Identity = 116/144 (80.56%), Postives = 127/144 (88.19%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QAS+F + VP   +     R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTTQASTFAVAVPSVTTPFRSHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAGN+Q IT+++IK +TANM
Sbjct: 121 PDNDFAGNEQTITLDEIKESTANM 144

[Close]
BLAST of Cp4.1LG01g23140 vs. NCBI nr
Match: gi|1012328147|gb|KYP39809.1| (hypothetical protein KK1_038874 [Cajanus cajan])

HSP 1 Score: 246.5 bits (628), Expect = 2.8e-62
Identity = 115/144 (79.86%), Postives = 128/144 (88.89%), Query Frame = 1 

Query: 1   MILQASSFNIVVPLSGSSRVRSRHSHVVRAQGEPSDKSVEIMRKFSEQYARKSGTYFCVD 60
           M  QASSF++ V    +   R R+  VVRAQ EPSDKSVEIMRKFSEQYARKSGTYFCVD
Sbjct: 1   MTAQASSFSVAVSSVATPFRRHRNPFVVRAQAEPSDKSVEIMRKFSEQYARKSGTYFCVD 60

Query: 61  KGVTAVVIKGLADHKDTLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120
           KGVT+VVIKGLADHKD+LGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT
Sbjct: 61  KGVTSVVIKGLADHKDSLGAPLCPCRHYDDKAAEVAQGFWNCPCVPMRERKECHCMLFLT 120

Query: 121 PENDFAGNDQVITMEDIKATTANM 145
           P+NDFAG++Q IT+++IK +TANM
Sbjct: 121 PDNDFAGDEQTITLDEIKESTANM 144

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g23140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FTRC_SOYBN9.3e-6681.25Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine max G... [more]
FTRC_ARATH1.1e-5879.55Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Arabidopsis t... [more]
FTRC1_SPIOL2.1e-5774.24Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oler... [more]
FTRC2_SPIOL7.9e-5777.27Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oler... [more]
FTRC_MAIZE9.7e-5575.74Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Zea mays GN=F... [more]
BLAST of Cp4.1LG01g23140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTZ8_CUCSA2.3e-7190.97Uncharacterized protein OS=Cucumis sativus GN=Csa_5G631540 PE=4 SV=1[more]
A0A0R0GWL3_SOYBN1.0e-6381.25Uncharacterized protein OS=Glycine max GN=GLYMA_13G069100 PE=4 SV=1[more]
A0A0B2PVY0_GLYSO1.0e-6381.25Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine soja ... [more]
I1N5X5_SOYBN8.8e-6380.56Uncharacterized protein OS=Glycine max GN=GLYMA_19G013800 PE=4 SV=1[more]
A0A0B2Q8T3_GLYSO8.8e-6380.56Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Glycine soja ... [more]
BLAST of Cp4.1LG01g23140 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G04700.16.2e-6079.55 ferredoxin thioredoxin reductase catalytic beta chain family protein[more]
BLAST of Cp4.1LG01g23140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117658|ref|XP_008458720.1|6.7e-7291.67PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucu... [more]
gi|449449186|ref|XP_004142346.1|3.3e-7190.97PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Cucu... [more]
gi|407971016|ref|NP_001236326.1|1.5e-6381.25ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Glycine max][more]
gi|734363080|gb|KHN16349.1|1.3e-6280.56Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Glycine soja][more]
gi|1012328147|gb|KYP39809.1|2.8e-6279.86hypothetical protein KK1_038874 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016730oxidoreductase activity, acting on iron-sulfur proteins as donors
Vocabulary: INTERPRO
TermDefinition
IPR004209FTR_bsu
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0019252 starch biosynthetic process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0030386 ferredoxin:thioredoxin reductase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0030385 ferredoxin:thioredoxin reductase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g23140.1Cp4.1LG01g23140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004209Ferredoxin thioredoxin reductase catalytic beta subunitGENE3DG3DSA:3.90.460.10coord: 32..142
score: 2.4
IPR004209Ferredoxin thioredoxin reductase catalytic beta subunitPFAMPF02943FeThRed_Bcoord: 39..138
score: 1.8
IPR004209Ferredoxin thioredoxin reductase catalytic beta subunitunknownSSF57662Ferredoxin thioredoxin reductase (FTR), catalytic beta chaincoord: 36..141
score: 1.83
NoneNo IPR availablePANTHERPTHR35113FAMILY NOT NAMEDcoord: 1..144
score: 1.1
NoneNo IPR availablePANTHERPTHR35113:SF1FERREDOXIN-THIOREDOXIN REDUCTASE CATALYTIC CHAIN, CHLOROPLASTICcoord: 1..144
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g23140Cucsa.158840Cucumber (Gy14) v1cgycpeB0425
Cp4.1LG01g23140CmoCh04G028580Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g23140Csa5G631540Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g23140MELO3C021510Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g23140CSPI05G28400Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g23140MELO3C021510.2Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g23140CsaV3_5G037480Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g23140Bhi06G000398Wax gourdcpewgoB0502
Cp4.1LG01g23140CsGy5G027730Cucumber (Gy14) v2cgybcpeB625
Cp4.1LG01g23140Carg04414Silver-seed gourdcarcpeB0965
Cp4.1LG01g23140Carg02279Silver-seed gourdcarcpeB0374
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g23140Wax gourdcpewgoB0573
Cp4.1LG01g23140Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g23140Cucurbita pepo (Zucchini)cpecpeB347
Cp4.1LG01g23140Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g23140Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g23140Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g23140Bottle gourd (USVL1VR-Ls)cpelsiB336
Cp4.1LG01g23140Watermelon (Charleston Gray)cpewcgB344
Cp4.1LG01g23140Watermelon (97103) v1cpewmB381
Cp4.1LG01g23140Cucumber (Gy14) v2cgybcpeB064
Cp4.1LG01g23140Cucumber (Gy14) v2cgybcpeB371
Cp4.1LG01g23140Melon (DHL92) v3.6.1cpemedB452
Cp4.1LG01g23140Silver-seed gourdcarcpeB0509
Cp4.1LG01g23140Cucumber (Chinese Long) v3cpecucB0475