MELO3C021057 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021057
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRPM1 interacting protein 4, putative
Locationchr1 : 25366512 .. 25368173 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTGAGTTCTTCTAATTTTATCATCTTTTCATTTTCTCTTGTATGTTTATGTCTCTTTGGTTTCTGAGAAAATTAGGATTTTTGTGGTAGTTTGGTAGATCTGGATTTTAATTTGTTTTTCTTTTATGATTTTGTTTTTGTATTGGAATTAATCGGATATTTTTCTCCTTCTCTGTTTCAAGATGAGGTTTCTCTGTTCTTTTGTATTATTTTCACGTTTTTTTTTTTTTTTGCATTCGATTTGACTTTTCTAGCTGAACTGGAAGAGTATAATGATTTCTTGAAATGTCAAGATCATTTTAGTTCTTTTTATAAATCTTGATTCAGATTCAATCCAAGTTTGAATTTTTTTGTCTTGAAAAAGATGTGTTCGAACAATAATAATTTTGTGTAAATCCAGCTTCAAAGAGCTTTCTTGCTAGCAACTTTTACAATGATTAAGGCACTCTGTATGATTTAATTGATGTGGCACTATAAAGATCTTTTTTTTTTTTTTTTTTTTTTGGTTCTTTCTATAGAATGAAAATTTAAGGGAAGTGACTTCAATCTTCCATTTTAAGAGAAATTGTTGGTCAAAACTATCGAAGTATTCTTATAATTAAATTTAGCTTAAACTCTTGAGTTAGTGGTTGATTAAATATGGTATCAAAACAAGATGATGTTTTGTGTGTTGGAACCACTATACTATCGTTTTTTCCACTACTTAGATCATAACTAATCAACTACATGAATCGATGATTTAGTACAAGTGTTGAAAAATGTGTTTTTGTTGGAACAGCAAAGGTCACATGTACCAGCATTTGGGAATTGGGAAAGCGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCAAGAAAGGGCAGAGGAGGCGGACCGATCAGAAACCCGAACGATCCCGAGGAATATCCAGACATTCTCATCGACAATTCACATGAAGCTCCTCCATCCAAACCCAGTCTAAAGGACGACACTCCACCACCAAAACCTACCACTCATGAGAGGAGACATAGTCGAGAAGATGGCGGCTTTCGCCCCTACGCTAACTCCCCCGGCAACCGTGAAAATCCGGGTCGGAGACAGAGCGGCTCCGACTATAGCATCGACCGCTCTCCTCTCCATCGCCAGGCGAAGCCCTCAGCAAGAGACAGTTCGATGACAGAGGGCAAGAGCTTTGAGGGTAGCTACGACAACCGCGGGAAGACTAAAACGAAAAACAATTCCCCTGTGAGTTTTATTTTTCCGTTTGTTCTTAACTTGGGTTTGAATAATACACGGTTAGTATTTTTTCGGGTTAAATTATAAAGTTGGTTCAAATTTTAGAGTTACATGTGTTTTAGTAAATGAAATATAAAGGATGACTCCAATATTTGCTCGCCTCAAATTTCAATTTCAGTTCCAATTCCAATATTCTATTGCTTGAGTTTTGAAATGGCAGTTTTAAATTGGGTTGTGGTGCAGCCGGAAGGGACGGCGGTGCCGAAGTTTGGATCGTGGGATGTGAACAATCCGGCATCGGCCGACGGTTTTACCCACATTTTTGGTAAAGTTCGAGAGGAAAGGTTGGGGCCCGGAACCCCGCCGCCGCAACATTCTTCTTCACCTTACAACAATGCTAATAACCGAAGACCCGATGACAGTGTCAAGGTATTTTAA

mRNA sequence

ATGGCGCAAAGGTCACATGTACCAGCATTTGGGAATTGGGAAAGCGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCAAGAAAGGGCAGAGGAGGCGGACCGATCAGAAACCCGAACGATCCCGAGGAATATCCAGACATTCTCATCGACAATTCACATGAAGCTCCTCCATCCAAACCCAGTCTAAAGGACGACACTCCACCACCAAAACCTACCACTCATGAGAGGAGACATAGTCGAGAAGATGGCGGCTTTCGCCCCTACGCTAACTCCCCCGGCAACCGTGAAAATCCGGGTCGGAGACAGAGCGGCTCCGACTATAGCATCGACCGCTCTCCTCTCCATCGCCAGGCGAAGCCCTCAGCAAGAGACAGTTCGATGACAGAGGGCAAGAGCTTTGAGGGTAGCTACGACAACCGCGGGAAGACTAAAACGAAAAACAATTCCCCTCCGGAAGGGACGGCGGTGCCGAAGTTTGGATCGTGGGATGTGAACAATCCGGCATCGGCCGACGGTTTTACCCACATTTTTGGTAAAGTTCGAGAGGAAAGGTTGGGGCCCGGAACCCCGCCGCCGCAACATTCTTCTTCACCTTACAACAATGCTAATAACCGAAGACCCGATGACAGTGTCAAGGTATTTTAA

Coding sequence (CDS)

ATGGCGCAAAGGTCACATGTACCAGCATTTGGGAATTGGGAAAGCGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCAAGAAAGGGCAGAGGAGGCGGACCGATCAGAAACCCGAACGATCCCGAGGAATATCCAGACATTCTCATCGACAATTCACATGAAGCTCCTCCATCCAAACCCAGTCTAAAGGACGACACTCCACCACCAAAACCTACCACTCATGAGAGGAGACATAGTCGAGAAGATGGCGGCTTTCGCCCCTACGCTAACTCCCCCGGCAACCGTGAAAATCCGGGTCGGAGACAGAGCGGCTCCGACTATAGCATCGACCGCTCTCCTCTCCATCGCCAGGCGAAGCCCTCAGCAAGAGACAGTTCGATGACAGAGGGCAAGAGCTTTGAGGGTAGCTACGACAACCGCGGGAAGACTAAAACGAAAAACAATTCCCCTCCGGAAGGGACGGCGGTGCCGAAGTTTGGATCGTGGGATGTGAACAATCCGGCATCGGCCGACGGTTTTACCCACATTTTTGGTAAAGTTCGAGAGGAAAGGTTGGGGCCCGGAACCCCGCCGCCGCAACATTCTTCTTCACCTTACAACAATGCTAATAACCGAAGACCCGATGACAGTGTCAAGGTATTTTAA

Protein sequence

MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQAKPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVKVF*
Homology
[Close]
BLAST of MELO3C021057 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-32
Identity = 88/223 (39.46%), Postives = 112/223 (50.22%), Query Frame = 1 

Query: 4   RSHVPAFGNWESEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPDILIDNSHEAPPSKP 63
           RS+VP FGNWE+E NVPYT +FDKARK R  G  I NPNDPE   D    +  +APP  P
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD----SQSQAPPHPP 62

Query: 64  SLKDDTPPPKPTTHERRH--SREDGGFRPYANSPGN-----RENPGRRQSGSDYSIDRSP 123
           S +            R H  SRE+   + + ++ G+      +  GR    + Y  ++SP
Sbjct: 63  SSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYD-NKSP 122

Query: 124 LHRQAKPSARDSSMTEGKSFEGSYDNRGKTKTK------NNSPPEGTAVPKFGSWDVNNP 183
           LH+                   SYD  GK++ K      + SP + T VPKFG WD NNP
Sbjct: 123 LHKN------------------SYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNP 182

Query: 184 ASADGFTHIFGKVREERLGPG-------TPPPQHSSSPYNNAN 206
           +SADG+THIF KVREER           TP  Q S +P N ++
Sbjct: 183 SSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSS 202

[Close]
BLAST of MELO3C021057 vs. Swiss-Prot
Match: NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.4e-10
Identity = 63/230 (27.39%), Postives = 93/230 (40.43%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPD------ILIDN 60
           MAQ +HVP FGNW+ E N+ YT +F+   + +G G  I NPNDPEE P       +  D+
Sbjct: 1   MAQPAHVPKFGNWDGE-NISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQDH 60

Query: 61  SHEAPPSKPSLKDDTPPPKPTTHERR-HSREDGGFRPYANSPGNRENPGR---------R 120
            H     K      T       H R+ H RED  F  Y  +P    +P +         R
Sbjct: 61  QHS---EKHHNDTSTDYHVVKQHRRKHHRREDREFHRYVEAPRPHRSPFQGVDMDSHRSR 120

Query: 121 QSGSDYSIDRS---------PLHRQAKPSARDSSMTEGKSF------EGSYDNRGKTKTK 180
             G+  ++  S         P H+  + + +D  + EGKS+        SY    K   +
Sbjct: 121 NHGTSATMSSSVKRNSDNWLPQHQHHRRTNKD--LAEGKSWLFTTTTASSYTKSRKLSRE 180

Query: 181 NNSPPEGTAVPK--FGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQH 197
            +S  + +   K      +  +P S   F     K++E++    T   QH
Sbjct: 181 CSSTTQSSISAKNLVPGDETRSPISWRVFQSYLTKLKEQKQIAATKIGQH 224

[Close]
BLAST of MELO3C021057 vs. TrEMBL
Match: A0A0A0K570_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G343300 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 2.5e-117
Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPS 60
           MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDI +DNSHEAPPS
Sbjct: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDIFMDNSHEAPPS 60

Query: 61  KPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQA 120
           KPS KDDTPPPKPTTHERR SREDGGFRPYANSPGNREN GRRQSGS+YSIDRSPLHRQA
Sbjct: 61  KPSPKDDTPPPKPTTHERRQSREDGGFRPYANSPGNRENQGRRQSGSEYSIDRSPLHRQA 120

Query: 121 KPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFG 180
           KPSARDSSMTEGKSFEG+YDNRGKTKTKNNSPPEGTA+PKFGSWDVNNPASADGFTHIFG
Sbjct: 121 KPSARDSSMTEGKSFEGNYDNRGKTKTKNNSPPEGTALPKFGSWDVNNPASADGFTHIFG 180

Query: 181 KVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 215
           KVREERLGPGT  PQHSSSPYNNANN RPDDS K
Sbjct: 181 KVREERLGPGT--PQHSSSPYNNANNGRPDDSAK 212

[Close]
BLAST of MELO3C021057 vs. TrEMBL
Match: M5VNG2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010450mg PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 123/248 (49.60%), Postives = 152/248 (61.29%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGG--GPIRNPNDPEEYPDILIDNSHEAP 60
           M QRSHVP FGNWE E NVPYT +FDKARKGR G  G + NPNDP++  D+L D S  A 
Sbjct: 1   MTQRSHVPKFGNWEGEENVPYTAYFDKARKGRTGPGGKMINPNDPQQNQDMLSDISSSAS 60

Query: 61  PSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRR--------------- 120
            S P ++ +   P+   HERR SRED   R +ANSP +REN GRR               
Sbjct: 61  -SPPKVRAE---PERPVHERRRSREDNDLRQFANSPAHRENLGRRTSGEAANQPNRGRGV 120

Query: 121 ------------QSGSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDNRGKTKTK-- 180
                        SGS+YS++RSPLHR A+ S RDS   EGK S+E S+   G+++ K  
Sbjct: 121 SSGETHRKPARPSSGSEYSVERSPLHRNARVSGRDSPSWEGKPSYESSHGTPGRSRLKPR 180

Query: 181 NNSPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREERLG--PGTPPPQHSSSPYNNANN 215
           + SP +G AVPKFG WD N+PASADGFTHIF KVREE+ G  PGTP    S S Y++A  
Sbjct: 181 DESPEKGAAVPKFGEWDENDPASADGFTHIFNKVREEKAGKVPGTP----SQSSYHDARK 240

[Close]
BLAST of MELO3C021057 vs. TrEMBL
Match: D2D0J1_MALDO (RIN4-like protein OS=Malus domestica GN=RIN4-1 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51
Identity = 119/239 (49.79%), Postives = 142/239 (59.41%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGG--GPIRNPNDPEEYPDILIDNSHEAP 60
           MAQRSHVP FGNWE + +VPYT +FDKARKGR G  G + NPNDPEE PDIL D S  +P
Sbjct: 1   MAQRSHVPKFGNWEDQESVPYTAYFDKARKGRTGVGGKMINPNDPEENPDILSDTSASSP 60

Query: 61  PSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQ-------------- 120
           P         P P    HERR SRED   R +ANSP  R + G  Q              
Sbjct: 61  PKV------RPEPGKPVHERRRSREDNDLR-FANSPAQRRSSGEHQPNRGRGVSSGETHR 120

Query: 121 ------SGSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDN--RGKTKTKNNSPPEG 180
                 +GS+ S++RSPLHR A+ S RDS   EGK S+E S+    R + K ++ SP +G
Sbjct: 121 RAARPSAGSENSVERSPLHRNARVSGRDSPSWEGKASYESSHGTPARSRLKPRDESPEKG 180

Query: 181 TAVPKFGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 215
            AVPKFG WD N+PASADGFTHIF KVREE+ G     P H S  Y +A  +  +DS K
Sbjct: 181 AAVPKFGEWDENDPASADGFTHIFNKVREEKAGKAPGTPSHPS--YQDARKQGSNDSAK 230

[Close]
BLAST of MELO3C021057 vs. TrEMBL
Match: D2D0J2_MALDO (RIN4-like protein OS=Malus domestica GN=RIN4-2 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50
Identity = 120/243 (49.38%), Postives = 145/243 (59.67%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGG--GPIRNPNDPEEYPDILIDNSHEAP 60
           MAQRSHVP FGNWE E +VPYT +FDKARK R G  G + NPNDP+E PDIL D S  +P
Sbjct: 1   MAQRSHVPKFGNWEGEESVPYTAYFDKARKDRTGVGGKMINPNDPQENPDILSDISASSP 60

Query: 61  PSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNREN------------------- 120
           P         P P+   HE+R SRED   R +ANSP  R N                   
Sbjct: 61  PKV------RPEPEKPVHEQRRSREDNDLR-FANSPAQRRNSGESAHQPSRGRGVSSGET 120

Query: 121 ---PGRRQSGSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDNRGKTKTK--NNSPP 180
              P R  +GS+ S++RSPLHR A+ + RDS   EGK S+E S+   G+++ K  + SP 
Sbjct: 121 RRRPARPSAGSENSVERSPLHRNARVTGRDSPSWEGKASYETSHGTPGRSRLKPRDESPE 180

Query: 181 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERLG--PGTPPPQHSSSPYNNANNRRPDD 215
           +G AVPKFG WD N+PASADGFTHIF KVREER G  PGTP    S   Y +A  +  +D
Sbjct: 181 KGAAVPKFGEWDENDPASADGFTHIFNKVREERAGKVPGTP----SQPSYQDARRQGSND 232

[Close]
BLAST of MELO3C021057 vs. TrEMBL
Match: W9RMU7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007022 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.7e-49
Identity = 118/254 (46.46%), Postives = 143/254 (56.30%), Query Frame = 1 

Query: 3   QRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPSKP 62
           QRSHVP FGNWE+E NVPYT +FDKARKGR G  + NPNDPE+ PDIL D S  A  S  
Sbjct: 4   QRSHVPKFGNWENEENVPYTAYFDKARKGRTGTTMINPNDPEDNPDILSDYSSSADTSLT 63

Query: 63  SLKDDTPPPKP------TTHERRHSREDGGFRPYANSPGNRENPGRRQS----------- 122
                  P +P      + HER+ S+ED   R +AN+P N  N GRR S           
Sbjct: 64  KKNGGPKPAEPGAGAVRSAHERQRSKEDSELRQFANAPANHNNLGRRTSYDLTNQRQGGG 123

Query: 123 ------------------GSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDNRGKTK 182
                             GSD SI++SPLHR A+ + RDS   EGK S+EG    R + +
Sbjct: 124 GRGAVSGDTQRRPARHSTGSDQSIEKSPLHRHARATGRDSPSWEGKSSYEGGTPGRSRLR 183

Query: 183 TKNNSPPE-GTAVPKFGSWDVNNPASADGFTHIFGKVREER-LGP---GTPPPQHSSSPY 216
            + +  P+ G AVPKFG WD  NPASADGFTHIF KVREER +G    GTP P     PY
Sbjct: 184 PRGDETPDHGAAVPKFGEWDETNPASADGFTHIFNKVREERQIGAGRVGTPEP-----PY 243

[Close]
BLAST of MELO3C021057 vs. TAIR10
Match: AT3G25070.1 (AT3G25070.1 RPM1 interacting protein 4)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 88/223 (39.46%), Postives = 112/223 (50.22%), Query Frame = 1 

Query: 4   RSHVPAFGNWESEGNVPYTVFFDKARKGRG-GGPIRNPNDPEEYPDILIDNSHEAPPSKP 63
           RS+VP FGNWE+E NVPYT +FDKARK R  G  I NPNDPE   D    +  +APP  P
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD----SQSQAPPHPP 62

Query: 64  SLKDDTPPPKPTTHERRH--SREDGGFRPYANSPGN-----RENPGRRQSGSDYSIDRSP 123
           S +            R H  SRE+   + + ++ G+      +  GR    + Y  ++SP
Sbjct: 63  SSRTKPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYD-NKSP 122

Query: 124 LHRQAKPSARDSSMTEGKSFEGSYDNRGKTKTK------NNSPPEGTAVPKFGSWDVNNP 183
           LH+                   SYD  GK++ K      + SP + T VPKFG WD NNP
Sbjct: 123 LHKN------------------SYDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNP 182

Query: 184 ASADGFTHIFGKVREERLGPG-------TPPPQHSSSPYNNAN 206
           +SADG+THIF KVREER           TP  Q S +P N ++
Sbjct: 183 SSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNPNNTSS 202

[Close]
BLAST of MELO3C021057 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-08
Identity = 25/52 (48.08%), Postives = 29/52 (55.77%), Query Frame = 1 

Query: 154 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQHSSSPYNNAN 206
           +G  +PKFG WDVN+P+SA+GFT IF K R E+ G G         P  N N
Sbjct: 4   KGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKN 55

[Close]
BLAST of MELO3C021057 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08
Identity = 25/46 (54.35%), Postives = 29/46 (63.04%), Query Frame = 1 

Query: 154 EGTAVPKFGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQHSSS 200
           +G  +PKFG WDVN+PASA+GFT IF K R+E+   G P     SS
Sbjct: 20  KGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSS 65

[Close]
BLAST of MELO3C021057 vs. TAIR10
Match: AT5G63270.1 (AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08
Identity = 30/73 (41.10%), Postives = 38/73 (52.05%), Query Frame = 1 

Query: 154 EGTAVPKFGSWDVNNPASADGFTHIFGKVREER-------LGPG---TPPPQHSSSPYNN 213
           +G  +PKFG WDVNNPASA+GFT IF K  +E+        GP    +P    +S   NN
Sbjct: 5   KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 214 ANNRRPDDSVKVF 217
            +++ P    K F
Sbjct: 65  HSSQNPKAKNKWF 77

[Close]
BLAST of MELO3C021057 vs. TAIR10
Match: AT3G07195.1 (AT3G07195.1 RPM1-interacting protein 4 (RIN4) family protein)

HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08
Identity = 53/194 (27.32%), Postives = 73/194 (37.63%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILID------NS 60
           MA R HVP FG+W ++ + P+TV FD AR  +      +   PE  P  L          
Sbjct: 1   MANRPHVPKFGDWNNQ-DQPFTVVFDNARTNKRQDLYESIEKPETKPQELAPPPPQPARR 60

Query: 61  HEAPPSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDY-SIDR 120
            + P +   +K DTP   P T + R               G     G   +G  Y     
Sbjct: 61  IQKPEAPKPVKQDTPRAPPPTEKNRVKAPPADQLYGGGGSGGGGRSGSGSAGGLYGGYGG 120

Query: 121 SPLHRQAKPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKF-GSWDVNNPASA 180
             +  Q +P A   +    ++  G  + RG           GT +P F GS       S 
Sbjct: 121 GSVGNQRQPPAPRPTQPR-QNLRGGNNGRG-----------GTTIPPFPGSVGAGGDMS- 178

Query: 181 DGFTHIFGKVREER 187
             +T IF KV+EER
Sbjct: 181 --YTQIFEKVKEER 178

[Close]
BLAST of MELO3C021057 vs. NCBI nr
Match: gi|659116341|ref|XP_008458026.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo])

HSP 1 Score: 459.5 bits (1181), Expect = 3.2e-126
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPS 60
           MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPS
Sbjct: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPS 60

Query: 61  KPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQA 120
           KPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQA
Sbjct: 61  KPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQA 120

Query: 121 KPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFG 180
           KPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFG
Sbjct: 121 KPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFG 180

Query: 181 KVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 215
           KVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK
Sbjct: 181 KVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 214

[Close]
BLAST of MELO3C021057 vs. NCBI nr
Match: gi|778726982|ref|XP_004139625.2| (PREDICTED: RPM1-interacting protein 4 [Cucumis sativus])

HSP 1 Score: 429.5 bits (1103), Expect = 3.5e-117
Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPS 60
           MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDI +DNSHEAPPS
Sbjct: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDIFMDNSHEAPPS 60

Query: 61  KPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQA 120
           KPS KDDTPPPKPTTHERR SREDGGFRPYANSPGNREN GRRQSGS+YSIDRSPLHRQA
Sbjct: 61  KPSPKDDTPPPKPTTHERRQSREDGGFRPYANSPGNRENQGRRQSGSEYSIDRSPLHRQA 120

Query: 121 KPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFG 180
           KPSARDSSMTEGKSFEG+YDNRGKTKTKNNSPPEGTA+PKFGSWDVNNPASADGFTHIFG
Sbjct: 121 KPSARDSSMTEGKSFEGNYDNRGKTKTKNNSPPEGTALPKFGSWDVNNPASADGFTHIFG 180

Query: 181 KVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 215
           KVREERLGPGT  PQHSSSPYNNANN RPDDS K
Sbjct: 181 KVREERLGPGT--PQHSSSPYNNANNGRPDDSAK 212

[Close]
BLAST of MELO3C021057 vs. NCBI nr
Match: gi|595797017|ref|XP_007201227.1| (hypothetical protein PRUPE_ppa010450mg [Prunus persica])

HSP 1 Score: 214.2 bits (544), Expect = 2.3e-52
Identity = 123/248 (49.60%), Postives = 152/248 (61.29%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGG--GPIRNPNDPEEYPDILIDNSHEAP 60
           M QRSHVP FGNWE E NVPYT +FDKARKGR G  G + NPNDP++  D+L D S  A 
Sbjct: 1   MTQRSHVPKFGNWEGEENVPYTAYFDKARKGRTGPGGKMINPNDPQQNQDMLSDISSSAS 60

Query: 61  PSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRR--------------- 120
            S P ++ +   P+   HERR SRED   R +ANSP +REN GRR               
Sbjct: 61  -SPPKVRAE---PERPVHERRRSREDNDLRQFANSPAHRENLGRRTSGEAANQPNRGRGV 120

Query: 121 ------------QSGSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDNRGKTKTK-- 180
                        SGS+YS++RSPLHR A+ S RDS   EGK S+E S+   G+++ K  
Sbjct: 121 SSGETHRKPARPSSGSEYSVERSPLHRNARVSGRDSPSWEGKPSYESSHGTPGRSRLKPR 180

Query: 181 NNSPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREERLG--PGTPPPQHSSSPYNNANN 215
           + SP +G AVPKFG WD N+PASADGFTHIF KVREE+ G  PGTP    S S Y++A  
Sbjct: 181 DESPEKGAAVPKFGEWDENDPASADGFTHIFNKVREEKAGKVPGTP----SQSSYHDARK 240

[Close]
BLAST of MELO3C021057 vs. NCBI nr
Match: gi|645259630|ref|XP_008235453.1| (PREDICTED: RPM1-interacting protein 4-like [Prunus mume])

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-51
Identity = 123/248 (49.60%), Postives = 150/248 (60.48%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGG--GPIRNPNDPEEYPDILIDNSHEAP 60
           MAQRSHVP FGNWE E NVPYT +FDKARKGR G  G + NPNDP++  D+L D S  A 
Sbjct: 1   MAQRSHVPKFGNWEGEENVPYTAYFDKARKGRTGPGGKMINPNDPQQNQDMLSDISSSAS 60

Query: 61  PSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRR--------------- 120
            S P  + +   P+    ERR SRED   R +ANSP +REN GRR               
Sbjct: 61  -SPPKFRAE---PERPVDERRRSREDNDLRQFANSPAHRENLGRRTSGEAANQPNRGRGV 120

Query: 121 ------------QSGSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDNRGKTKTK-- 180
                        SGS+YS++RSPLHR A+ S RDS   EGK S+E S+   G+++ K  
Sbjct: 121 SSGETHRKPARPSSGSEYSVERSPLHRNARVSGRDSPSWEGKASYESSHGTPGRSRLKPR 180

Query: 181 NNSPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREERLG--PGTPPPQHSSSPYNNANN 215
           + SP +G AVPKFG WD N+PASADGFTHIF KVREE+ G  PGTP    S S Y +A  
Sbjct: 181 DESPEKGAAVPKFGEWDENDPASADGFTHIFNKVREEKAGKAPGTP----SQSSYQDARK 240

[Close]
BLAST of MELO3C021057 vs. NCBI nr
Match: gi|658309626|ref|NP_001280923.1| (RPM1-interacting protein 4 [Malus domestica])

HSP 1 Score: 210.3 bits (534), Expect = 3.4e-51
Identity = 119/239 (49.79%), Postives = 142/239 (59.41%), Query Frame = 1 

Query: 1   MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGG--GPIRNPNDPEEYPDILIDNSHEAP 60
           MAQRSHVP FGNWE + +VPYT +FDKARKGR G  G + NPNDPEE PDIL D S  +P
Sbjct: 1   MAQRSHVPKFGNWEDQESVPYTAYFDKARKGRTGVGGKMINPNDPEENPDILSDTSASSP 60

Query: 61  PSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQ-------------- 120
           P         P P    HERR SRED   R +ANSP  R + G  Q              
Sbjct: 61  PKV------RPEPGKPVHERRRSREDNDLR-FANSPAQRRSSGEHQPNRGRGVSSGETHR 120

Query: 121 ------SGSDYSIDRSPLHRQAKPSARDSSMTEGK-SFEGSYDN--RGKTKTKNNSPPEG 180
                 +GS+ S++RSPLHR A+ S RDS   EGK S+E S+    R + K ++ SP +G
Sbjct: 121 RAARPSAGSENSVERSPLHRNARVSGRDSPSWEGKASYESSHGTPARSRLKPRDESPEKG 180

Query: 181 TAVPKFGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVK 215
            AVPKFG WD N+PASADGFTHIF KVREE+ G     P H S  Y +A  +  +DS K
Sbjct: 181 AAVPKFGEWDENDPASADGFTHIFNKVREEKAGKAPGTPSHPS--YQDARKQGSNDSAK 230

The following BLAST results are available for this feature:
BLAST of MELO3C021057 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIN4_ARATH2.0e-3239.46RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1[more]
NOIL_ELAOL6.4e-1027.39NOI-like protein OS=Elaeis oleifera PE=2 SV=1[more]
BLAST of MELO3C021057 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K570_CUCSA2.5e-11794.39Uncharacterized protein OS=Cucumis sativus GN=Csa_7G343300 PE=4 SV=1[more]
M5VNG2_PRUPE1.6e-5249.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010450mg PE=4 SV=1[more]
D2D0J1_MALDO2.3e-5149.79RIN4-like protein OS=Malus domestica GN=RIN4-1 PE=2 SV=1[more]
D2D0J2_MALDO3.4e-5049.38RIN4-like protein OS=Malus domestica GN=RIN4-2 PE=2 SV=1[more]
W9RMU7_9ROSA3.7e-4946.46Uncharacterized protein OS=Morus notabilis GN=L484_007022 PE=4 SV=1[more]
BLAST of MELO3C021057 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G25070.11.2e-3339.46 RPM1 interacting protein 4[more]
AT2G04410.16.4e-0848.08 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G55850.28.3e-0854.35 RPM1-interacting protein 4 (RIN4) family protein[more]
AT5G63270.18.3e-0841.10 RPM1-interacting protein 4 (RIN4) family protein[more]
AT3G07195.18.3e-0827.32 RPM1-interacting protein 4 (RIN4) family protein[more]
BLAST of MELO3C021057 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116341|ref|XP_008458026.1|3.2e-126100.00PREDICTED: RPM1-interacting protein 4-like [Cucumis melo][more]
gi|778726982|ref|XP_004139625.2|3.5e-11794.39PREDICTED: RPM1-interacting protein 4 [Cucumis sativus][more]
gi|595797017|ref|XP_007201227.1|2.3e-5249.60hypothetical protein PRUPE_ppa010450mg [Prunus persica][more]
gi|645259630|ref|XP_008235453.1|1.5e-5149.60PREDICTED: RPM1-interacting protein 4-like [Prunus mume][more]
gi|658309626|ref|NP_001280923.1|3.4e-5149.79RPM1-interacting protein 4 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0006279 premeiotic DNA replication
biological_process GO:0031938 regulation of chromatin silencing at telomere
biological_process GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication
biological_process GO:1900087 positive regulation of G1/S transition of mitotic cell cycle
biological_process GO:0045087 innate immune response
biological_process GO:0000727 double-strand break repair via break-induced replication
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0016255 attachment of GPI anchor to protein
biological_process GO:1902977 mitotic DNA replication preinitiation complex assembly
biological_process GO:0051567 histone H3-K9 methylation
biological_process GO:0008283 cell proliferation
biological_process GO:0051301 cell division
biological_process GO:0008150 biological_process
biological_process GO:0006306 DNA methylation
biological_process GO:0006270 DNA replication initiation
biological_process GO:0048229 gametophyte development
cellular_component GO:0005575 cellular_component
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0042765 GPI-anchor transamidase complex
cellular_component GO:0005656 nuclear pre-replicative complex
cellular_component GO:0046809 replication compartment
cellular_component GO:0031298 replication fork protection complex
cellular_component GO:0031261 DNA replication preinitiation complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0043138 3'-5' DNA helicase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003688 DNA replication origin binding
molecular_function GO:0003697 single-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021057T1MELO3C021057T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 154..186
score: 7.1
NoneNo IPR availablePANTHERPTHR33159FAMILY NOT NAMEDcoord: 1..186
score: 3.2
NoneNo IPR availablePANTHERPTHR33159:SF6RPM1-INTERACTING PROTEIN 4coord: 1..186
score: 3.2