MELO3C021057T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGAGTTCTTCTAATTTTATCATCTTTTCATTTTCTCTTGTATGTTTATGTCTCTTTGGTTTCTGAGAAAATTAGGATTTTTGTGGTAGTTTGGTAGATCTGGATTTTAATTTGTTTTTCTTTTATGATTTTGTTTTTGTATTGGAATTAATCGGATATTTTTCTCCTTCTCTGTTTCAAGATGAGGTTTCTCTGTTCTTTTGTATTATTTTCACGTTTTTTTTTTTTTTTGCATTCGATTTGACTTTTCTAGCTGAACTGGAAGAGTATAATGATTTCTTGAAATGTCAAGATCATTTTAGTTCTTTTTATAAATCTTGATTCAGATTCAATCCAAGTTTGAATTTTTTTGTCTTGAAAAAGATGTGTTCGAACAATAATAATTTTGTGTAAATCCAGCTTCAAAGAGCTTTCTTGCTAGCAACTTTTACAATGATTAAGGCACTCTGTATGATTTAATTGATGTGGCACTATAAAGATCTTTTTTTTTTTTTTTTTTTTTTGGTTCTTTCTATAGAATGAAAATTTAAGGGAAGTGACTTCAATCTTCCATTTTAAGAGAAATTGTTGGTCAAAACTATCGAAGTATTCTTATAATTAAATTTAGCTTAAACTCTTGAGTTAGTGGTTGATTAAATATGGTATCAAAACAAGATGATGTTTTGTGTGTTGGAACCACTATACTATCGTTTTTTCCACTACTTAGATCATAACTAATCAACTACATGAATCGATGATTTAGTACAAGTGTTGAAAAATGTGTTTTTGTTGGAACAGCAAAGGTCACATGTACCAGCATTTGGGAATTGGGAAAGCGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCAAGAAAGGGCAGAGGAGGCGGACCGATCAGAAACCCGAACGATCCCGAGGAATATCCAGACATTCTCATCGACAATTCACATGAAGCTCCTCCATCCAAACCCAGTCTAAAGGACGACACTCCACCACCAAAACCTACCACTCATGAGAGGAGACATAGTCGAGAAGATGGCGGCTTTCGCCCCTACGCTAACTCCCCCGGCAACCGTGAAAATCCGGGTCGGAGACAGAGCGGCTCCGACTATAGCATCGACCGCTCTCCTCTCCATCGCCAGGCGAAGCCCTCAGCAAGAGACAGTTCGATGACAGAGGGCAAGAGCTTTGAGGGTAGCTACGACAACCGCGGGAAGACTAAAACGAAAAACAATTCCCCTGTGAGTTTTATTTTTCCGTTTGTTCTTAACTTGGGTTTGAATAATACACGGTTAGTATTTTTTCGGGTTAAATTATAAAGTTGGTTCAAATTTTAGAGTTACATGTGTTTTAGTAAATGAAATATAAAGGATGACTCCAATATTTGCTCGCCTCAAATTTCAATTTCAGTTCCAATTCCAATATTCTATTGCTTGAGTTTTGAAATGGCAGTTTTAAATTGGGTTGTGGTGCAGCCGGAAGGGACGGCGGTGCCGAAGTTTGGATCGTGGGATGTGAACAATCCGGCATCGGCCGACGGTTTTACCCACATTTTTGGTAAAGTTCGAGAGGAAAGGTTGGGGCCCGGAACCCCGCCGCCGCAACATTCTTCTTCACCTTACAACAATGCTAATAACCGAAGACCCGATGACAGTGTCAAGGTATTTTAA ATGGCGCAAAGGTCACATGTACCAGCATTTGGGAATTGGGAAAGCGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCAAGAAAGGGCAGAGGAGGCGGACCGATCAGAAACCCGAACGATCCCGAGGAATATCCAGACATTCTCATCGACAATTCACATGAAGCTCCTCCATCCAAACCCAGTCTAAAGGACGACACTCCACCACCAAAACCTACCACTCATGAGAGGAGACATAGTCGAGAAGATGGCGGCTTTCGCCCCTACGCTAACTCCCCCGGCAACCGTGAAAATCCGGGTCGGAGACAGAGCGGCTCCGACTATAGCATCGACCGCTCTCCTCTCCATCGCCAGGCGAAGCCCTCAGCAAGAGACAGTTCGATGACAGAGGGCAAGAGCTTTGAGGGTAGCTACGACAACCGCGGGAAGACTAAAACGAAAAACAATTCCCCTCCGGAAGGGACGGCGGTGCCGAAGTTTGGATCGTGGGATGTGAACAATCCGGCATCGGCCGACGGTTTTACCCACATTTTTGGTAAAGTTCGAGAGGAAAGGTTGGGGCCCGGAACCCCGCCGCCGCAACATTCTTCTTCACCTTACAACAATGCTAATAACCGAAGACCCGATGACAGTGTCAAGGTATTTTAA ATGGCGCAAAGGTCACATGTACCAGCATTTGGGAATTGGGAAAGCGAAGGGAATGTTCCATACACAGTGTTCTTCGACAAGGCAAGAAAGGGCAGAGGAGGCGGACCGATCAGAAACCCGAACGATCCCGAGGAATATCCAGACATTCTCATCGACAATTCACATGAAGCTCCTCCATCCAAACCCAGTCTAAAGGACGACACTCCACCACCAAAACCTACCACTCATGAGAGGAGACATAGTCGAGAAGATGGCGGCTTTCGCCCCTACGCTAACTCCCCCGGCAACCGTGAAAATCCGGGTCGGAGACAGAGCGGCTCCGACTATAGCATCGACCGCTCTCCTCTCCATCGCCAGGCGAAGCCCTCAGCAAGAGACAGTTCGATGACAGAGGGCAAGAGCTTTGAGGGTAGCTACGACAACCGCGGGAAGACTAAAACGAAAAACAATTCCCCTCCGGAAGGGACGGCGGTGCCGAAGTTTGGATCGTGGGATGTGAACAATCCGGCATCGGCCGACGGTTTTACCCACATTTTTGGTAAAGTTCGAGAGGAAAGGTTGGGGCCCGGAACCCCGCCGCCGCAACATTCTTCTTCACCTTACAACAATGCTAATAACCGAAGACCCGATGACAGTGTCAAGGTATTTTAA MAQRSHVPAFGNWESEGNVPYTVFFDKARKGRGGGPIRNPNDPEEYPDILIDNSHEAPPSKPSLKDDTPPPKPTTHERRHSREDGGFRPYANSPGNRENPGRRQSGSDYSIDRSPLHRQAKPSARDSSMTEGKSFEGSYDNRGKTKTKNNSPPEGTAVPKFGSWDVNNPASADGFTHIFGKVREERLGPGTPPPQHSSSPYNNANNRRPDDSVKVF*
BLAST of MELO3C021057T1 vs. Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.0e-32 Identity = 88/223 (39.46%), Postives = 112/223 (50.22%), Query Frame = 1
BLAST of MELO3C021057T1 vs. Swiss-Prot
Match: NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.4e-10 Identity = 63/230 (27.39%), Postives = 93/230 (40.43%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TrEMBL
Match: A0A0A0K570_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G343300 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 2.5e-117 Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TrEMBL
Match: M5VNG2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010450mg PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52 Identity = 123/248 (49.60%), Postives = 152/248 (61.29%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TrEMBL
Match: D2D0J1_MALDO (RIN4-like protein OS=Malus domestica GN=RIN4-1 PE=2 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.3e-51 Identity = 119/239 (49.79%), Postives = 142/239 (59.41%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TrEMBL
Match: D2D0J2_MALDO (RIN4-like protein OS=Malus domestica GN=RIN4-2 PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50 Identity = 120/243 (49.38%), Postives = 145/243 (59.67%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TrEMBL
Match: W9RMU7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007022 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.7e-49 Identity = 118/254 (46.46%), Postives = 143/254 (56.30%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TAIR10
Match: AT3G25070.1 (AT3G25070.1 RPM1 interacting protein 4) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33 Identity = 88/223 (39.46%), Postives = 112/223 (50.22%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TAIR10
Match: AT2G04410.1 (AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 55.1 bits (131), Expect = 6.4e-08 Identity = 25/52 (48.08%), Postives = 29/52 (55.77%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TAIR10
Match: AT5G55850.2 (AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08 Identity = 25/46 (54.35%), Postives = 29/46 (63.04%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TAIR10
Match: AT5G63270.1 (AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08 Identity = 30/73 (41.10%), Postives = 38/73 (52.05%), Query Frame = 1
BLAST of MELO3C021057T1 vs. TAIR10
Match: AT3G07195.1 (AT3G07195.1 RPM1-interacting protein 4 (RIN4) family protein) HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08 Identity = 53/194 (27.32%), Postives = 73/194 (37.63%), Query Frame = 1
BLAST of MELO3C021057T1 vs. NCBI nr
Match: gi|659116341|ref|XP_008458026.1| (PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]) HSP 1 Score: 459.5 bits (1181), Expect = 3.2e-126 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of MELO3C021057T1 vs. NCBI nr
Match: gi|778726982|ref|XP_004139625.2| (PREDICTED: RPM1-interacting protein 4 [Cucumis sativus]) HSP 1 Score: 429.5 bits (1103), Expect = 3.5e-117 Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 1
BLAST of MELO3C021057T1 vs. NCBI nr
Match: gi|595797017|ref|XP_007201227.1| (hypothetical protein PRUPE_ppa010450mg [Prunus persica]) HSP 1 Score: 214.2 bits (544), Expect = 2.3e-52 Identity = 123/248 (49.60%), Postives = 152/248 (61.29%), Query Frame = 1
BLAST of MELO3C021057T1 vs. NCBI nr
Match: gi|645259630|ref|XP_008235453.1| (PREDICTED: RPM1-interacting protein 4-like [Prunus mume]) HSP 1 Score: 211.5 bits (537), Expect = 1.5e-51 Identity = 123/248 (49.60%), Postives = 150/248 (60.48%), Query Frame = 1
BLAST of MELO3C021057T1 vs. NCBI nr
Match: gi|658309626|ref|NP_001280923.1| (RPM1-interacting protein 4 [Malus domestica]) HSP 1 Score: 210.3 bits (534), Expect = 3.4e-51 Identity = 119/239 (49.79%), Postives = 142/239 (59.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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