MELO3C020986.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020986.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	mediator of RNA polymerase II transcription subunit 32
Location	chr11 : 2197710 .. 2199067 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAATTGCAAGCAGCTAGAATAATATCCCTTATCGAGAAGTACAAAGACAGTGAACTAATAGGTGAATAGGGATCTCTTAAGTTGCAGGAACAGTACATAACACTCCAAGATAGAGAAAGGTGCAAGGGAACTAATTGGGATTAGTTTGGTAATAGTAGGGGGCGGTAGGGTAATTAGTTAGGAAGTTGGTTAGGGTATTTGGTTATATAGAGGTAGGGGGACTGAGGGAAGGAAGCAATTAGTGAGTGATTTACTTACAGCATCATATATTCATATAAATGAACACACAAAACGTTTATGTTTTAGTTTTTGTTGTTAGGATTAAGAATACAAACATAGTCCCATCCTGGCTAGGGAAGGAAAAGATCCATGGTATGTAATTGAGGATGCTTATCTGTTATCTCCGTTGGACCATTGGTATGATCATTTTTAGGTAAAGTCAAGAGCAAACCATGAGAGCTTATCTTCAAAAGAGTATCTTACCGGTTGCCATTATGTGGATGGTCCAAATCATCTTTAACGTTTGTTTTTATCGAATAATTTAAACTAATATGGGTTCTTTTACACAGTTTGTAGGCTAAAGTGGCATATGAAAGTTTAGGAACCAAAATGCAATTGATATCTAAGTCTAAGTTCTTGCTTGTTTTCTCGTGCATATTAGCATTTCCCAACAGACTAGACTCTAGATACTTAATTTCTTGGTTGCCATATATTTAGGTATCTGATATGGACAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTGCTGGAGCAGCTAATGTTCTTGAAGCAAATGAAGCCTCTGGGGCTCAGAAGACGGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAAAAATGGGAGCTGTTCAGGGTTGCTTGTGATCAAGCAGAGGAGTTTGTAGAGTCTGTGAAGCAAAGGATAGGATCAGAGTGCCTTGTTGATGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGTCTGGTACCACTGGCCTTCCTCCGATCAGTGCTGTTCGATTGGAACAGATGAGCAAAGCTGTAAGATGGCTCGTGATTGAGTTGCAGCACGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACACTCTCATCAGTCTGCTCCTTTTGATGCTAGATTTACTGAGGATACAACCCAATAGGTACCGATCTTTCGAGGTTACATAATGAGTTCTTGTTTTTGTGTTTTGGATGAAATGGCTTTCTTGGGTGGCGGTGGGGTGTTAACTGTGTAAGATAATCAGCTTGAGCTTTGACTGAACATGAAAAAGCTGATCCATTTGTTCTGTATCTATCGTTAACTAAATATAGTTTCATGTTCTTTGTA

mRNA sequence

ATGGAACAATTGCAAGCAGCTAGAATAATATCCCTTATCGAGAAGTACAAAGACAGTGAACTAATAGGGGGCGGTAGGGTATCTGATATGGACAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTGCTGGAGCAGCTAATGTTCTTGAAGCAAATGAAGCCTCTGGGGCTCAGAAGACGGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAAAAATGGGAGCTGTTCAGGGTTGCTTGTGATCAAGCAGAGGAGTTTGTAGAGTCTGTGAAGCAAAGGATAGGATCAGAGTGCCTTGTTGATGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGTCTGGTACCACTGGCCTTCCTCCGATCAGTGCTGTTCGATTGGAACAGATGAGCAAAGCTGTAAGATGGCTCGTGATTGAGTTGCAGCACGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACACTCTCATCAGTCTGCTCCTTTTGATGCTAGATTTACTGAGGATACAACCCAATAGGTACCGATCTTTCGAGGTTACATAATGAGTTCTTGTTTTTGTGTTTTGGATGAAATGGCTTTCTTGGGTGGCGGTGGGGTGTTAACTGTGTAAGATAATCAGCTTGAGCTTTGACTGAACATGAAAAAGCTGATCCATTTGTTCTGTATCTATCGTTAACTAAATATAGTTTCATGTTCTTTGTA

Coding sequence (CDS)

ATGGAACAATTGCAAGCAGCTAGAATAATATCCCTTATCGAGAAGTACAAAGACAGTGAACTAATAGGGGGCGGTAGGGTATCTGATATGGACAGCCTAGTGGACTCTTTAAATAACGCATATCAGGAGTTTGTTGCTGGAGCAGCTAATGTTCTTGAAGCAAATGAAGCCTCTGGGGCTCAGAAGACGGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAAAAATGGGAGCTGTTCAGGGTTGCTTGTGATCAAGCAGAGGAGTTTGTAGAGTCTGTGAAGCAAAGGATAGGATCAGAGTGCCTTGTTGATGAGGCCACTGGTTCACTGGCTGGCAAGTCTGGGCAGTCTGGTACCACTGGCCTTCCTCCGATCAGTGCTGTTCGATTGGAACAGATGAGCAAAGCTGTAAGATGGCTCGTGATTGAGTTGCAGCACGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACACTCTCATCAGTCTGCTCCTTTTGATGCTAGATTTACTGAGGATACAACCCAATAG

Protein sequence

MEQLQAARIISLIEKYKDSELIGGGRVSDMDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGSGAAASASAHSHQSAPFDARFTEDTTQ

Homology

[Close]

BLAST of MELO3C020986.2 vs. NCBI nr
Match: XP_008457936.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 32 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
           XXXXXXXXXXXQSAPFDARFTEDTTQ
Sbjct: 121 XXXXXXXXXXXQSAPFDARFTEDTTQ 146

[Close]

BLAST of MELO3C020986.2 vs. NCBI nr
Match: XP_004148855.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 32 [Cucumis sativus] >KGN61780.1 hypothetical protein Csa_2G245440 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 6.0e-63
Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVKQRIGSECLVDEATGSLAGKSGQS TT LPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
           XXXXXXXXXXXQSAPFDARFTED TQ
Sbjct: 121 XXXXXXXXXXXQSAPFDARFTEDATQ 146

[Close]

BLAST of MELO3C020986.2 vs. NCBI nr
Match: XP_022986620.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 240.7 bits (613), Expect = 3.6e-60
Identity = 142/152 (93.42%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 27  VSDMDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQ 86
           VSDMDSLVDSLNNAYQEFV+GAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQ
Sbjct: 21  VSDMDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQ 80

Query: 87  AEEFVESVKQRIGSECLVDEATGSLAGKSGQSG--TTGLPPISAVRLEQMSKAVRWLVIE 146
           AEEFVESVKQRIGSECLVDEATGSLAGKSGQ+   TTGLPPISA+RLEQMSKAVRWLVIE
Sbjct: 81  AEEFVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIE 140

Query: 147 LQHG-SXXXXXXXXXXXQSAPFDARFTEDTTQ 176
           LQHG  XXXXXXXXXXX SAPFDARFTED TQ
Sbjct: 141 LQHGXXXXXXXXXXXXXPSAPFDARFTEDATQ 172

[Close]

BLAST of MELO3C020986.2 vs. NCBI nr
Match: XP_021655441.1 (mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis] >XP_021655442.1 mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis] >XP_021655443.1 mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis] >XP_021655444.1 mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis] >XP_021655445.1 mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis] >XP_021655446.1 mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis])

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 122/146 (83.56%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MD+LVDSLNNAYQEFVA AANVLEA E +GAQKTAATDAALENFKQ+WELFRVACDQAEE
Sbjct: 1   MDNLVDSLNNAYQEFVAAAANVLEAKEVAGAQKTAATDAALENFKQRWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVKQRIGSECLVDEATGS+ GKSGQ+GTTGLPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKQRIGSECLVDEATGSVTGKSGQAGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
                       SAPFDARF+ED  Q
Sbjct: 121 GAAGGVAAHAHSSAPFDARFSEDAAQ 146

[Close]

BLAST of MELO3C020986.2 vs. NCBI nr
Match: XP_022986622.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima] >XP_022986623.1 mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MDSLVDSLNNAYQEFV+GAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSG--TTGLPPISAVRLEQMSKAVRWLVIELQH 149
           FVESVKQRIGSECLVDEATGSLAGKSGQ+   TTGLPPISA+RLEQMSKAVRWLVIELQH
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQH 120

Query: 150 G-SXXXXXXXXXXXQSAPFDARFTEDTTQ 176
           G  XXXXXXXXXXX SAPFDARFTED TQ
Sbjct: 121 GXXXXXXXXXXXXXPSAPFDARFTEDATQ 149

[Close]

BLAST of MELO3C020986.2 vs. TAIR10
Match: AT1G11760.1 (MED32)

HSP 1 Score: 177.2 bits (448), Expect = 9.0e-45
Identity = 98/153 (64.05%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MD++VDSLN AY++FV  +A VLE+ E++G QK   TD ALENFK+KWELFRVACDQAEE
Sbjct: 1   MDNIVDSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATG---SLAGKSGQSGTTG----LPPISAVRLEQMSKAVRWLV 149
           FVESVKQRIGSECLVDEATG   + AG    +  TG    LPPISAVRLEQMS+AVRWLV
Sbjct: 61  FVESVKQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLV 120

Query: 150 IELQHGSXXXXXXXXXXXQSAPFDARFTEDTTQ 176
           +ELQ GS            S  FD+RF+ED+TQ
Sbjct: 121 LELQRGS--GVAPGSVHSSSTGFDSRFSEDSTQ 151

[Close]

BLAST of MELO3C020986.2 vs. Swiss-Prot
Match: sp|Q84VW5|MED32_ARATH (Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana OX=3702 GN=MED32 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.6e-43
Identity = 98/153 (64.05%), Postives = 114/153 (74.51%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MD++VDSLN AY++FV  +A VLE+ E++G QK   TD ALENFK+KWELFRVACDQAEE
Sbjct: 1   MDNIVDSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATG---SLAGKSGQSGTTG----LPPISAVRLEQMSKAVRWLV 149
           FVESVKQRIGSECLVDEATG   + AG    +  TG    LPPISAVRLEQMS+AVRWLV
Sbjct: 61  FVESVKQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLV 120

Query: 150 IELQHGSXXXXXXXXXXXQSAPFDARFTEDTTQ 176
           +ELQ GS            S  FD+RF+ED+TQ
Sbjct: 121 LELQRGS--GVAPGSVHSSSTGFDSRFSEDSTQ 151

[Close]

BLAST of MELO3C020986.2 vs. TrEMBL
Match: tr|A0A1S3C6T6|A0A1S3C6T6_CUCME (mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo OX=3656 GN=LOC103497499 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 4.2e-65
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
           XXXXXXXXXXXQSAPFDARFTEDTTQ
Sbjct: 121 XXXXXXXXXXXQSAPFDARFTEDTTQ 146

[Close]

BLAST of MELO3C020986.2 vs. TrEMBL
Match: tr|A0A0A0LIN7|A0A0A0LIN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.0e-63
Identity = 143/146 (97.95%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVKQRIGSECLVDEATGSLAGKSGQS TT LPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
           XXXXXXXXXXXQSAPFDARFTED TQ
Sbjct: 121 XXXXXXXXXXXQSAPFDARFTEDATQ 146

[Close]

BLAST of MELO3C020986.2 vs. TrEMBL
Match: tr|A0A2C9U7H9|A0A2C9U7H9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G099700 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.3e-57
Identity = 120/146 (82.19%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MD+LVDSLNNAYQEFVA AANVLEA E + AQKTAATDAALENFKQ+WELFRVACDQAEE
Sbjct: 1   MDNLVDSLNNAYQEFVAAAANVLEAKEIAVAQKTAATDAALENFKQRWELFRVACDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVK RIGSECLVDEATGS+ GKSGQ+GTTGLPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKLRIGSECLVDEATGSVTGKSGQAGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
                       SAPFDARF+ED  Q
Sbjct: 121 GAAGGVAGHANSSAPFDARFSEDAAQ 146

[Close]

BLAST of MELO3C020986.2 vs. TrEMBL
Match: tr|B9H0P1|B9H0P1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G152700v3 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.8e-56
Identity = 116/146 (79.45%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 30  MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 89
           MDS+VDSLNNAYQ+FV  AANVLEA E SG QKTAATD ALENFKQKWELFRV+CDQAEE
Sbjct: 1   MDSIVDSLNNAYQDFVGAAANVLEAKELSGGQKTAATDVALENFKQKWELFRVSCDQAEE 60

Query: 90  FVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLEQMSKAVRWLVIELQHGS 149
           FVESVKQR+GSECLVDEATGS++G+SGQ G TGLPPISAVRLEQMSKAVRWLVIELQHGS
Sbjct: 61  FVESVKQRVGSECLVDEATGSVSGRSGQGGVTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 150 XXXXXXXXXXXQSAPFDARFTEDTTQ 176
                       SAPFDARF+ED  Q
Sbjct: 121 GAAGGAAGHAHPSAPFDARFSEDAAQ 146

[Close]

BLAST of MELO3C020986.2 vs. TrEMBL
Match: tr|A0A061E0U2|A0A061E0U2_THECC (MED32, putative OS=Theobroma cacao OX=3641 GN=TCM_046999 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.8e-56
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 13  IEKYKDSELIGGGRVSDMDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALEN 72
           +++  DSEL    R+  MD++VDSLNNAYQEFVA AANVLE  E+S AQKTAATDAALEN
Sbjct: 28  LQRRLDSEL---KRLGVMDNIVDSLNNAYQEFVAAAANVLEIKESSAAQKTAATDAALEN 87

Query: 73  FKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLAGKSGQSGTTGLPPISAVRLE 132
            KQKWELFRVACDQAEEFVES+KQRIGSECLVDEATGS+AGKSGQ+ TTGLPPISAVRLE
Sbjct: 88  LKQKWELFRVACDQAEEFVESIKQRIGSECLVDEATGSMAGKSGQALTTGLPPISAVRLE 147

Query: 133 QMSKAVRWLVIELQHGSXXXXXXXXXXXQSAPFDARFTEDTTQ 176
           QMSKAVRWLVIELQHGS            SAPFDARF+ED  Q
Sbjct: 148 QMSKAVRWLVIELQHGS-GSAGGAAHAHPSAPFDARFSEDAAQ 186

The following BLAST results are available for this feature:

BLAST of MELO3C020986.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457936.1	6.4e-65	100.00	PREDICTED: mediator of RNA polymerase II transcription subunit 32 [Cucumis melo]	[more]
XP_004148855.1	6.0e-63	97.95	PREDICTED: mediator of RNA polymerase II transcription subunit 32 [Cucumis sativ...	[more]
XP_022986620.1	3.6e-60	93.42	mediator of RNA polymerase II transcription subunit 32-like isoform X1 [Cucurbit...	[more]
XP_021655441.1	1.2e-58	83.56	mediator of RNA polymerase II transcription subunit 32 [Hevea brasiliensis] >XP_...	[more]
XP_022986622.1	1.2e-58	93.29	mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbit...	[more]

BLAST of MELO3C020986.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11760.1	9.0e-45	64.05	MED32	[more]

BLAST of MELO3C020986.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84VW5\|MED32_ARATH	1.6e-43	64.05	Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana O...	[more]

BLAST of MELO3C020986.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6T6\|A0A1S3C6T6_CUCME	4.2e-65	100.00	mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0LIN7\|A0A0A0LIN7_CUCSA	4.0e-63	97.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1	[more]
tr\|A0A2C9U7H9\|A0A2C9U7H9_MANES	7.3e-57	82.19	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G099700 PE=4 SV=...	[more]
tr\|B9H0P1\|B9H0P1_POPTR	2.8e-56	79.45	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G152700v3 PE=...	[more]
tr\|A0A061E0U2\|A0A061E0U2_THECC	2.8e-56	76.07	MED32, putative OS=Theobroma cacao OX=3641 GN=TCM_046999 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010150	leaf senescence
GO:0009631	cold acclimation
GO:0006355	regulation of transcription, DNA-templated
GO:0048364	root development

Vocabulary: **Cellular Component**
Term	Definition
GO:0016592	mediator complex

Vocabulary: **INTERPRO**
Term	Definition
IPR033244	MED32

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0010150	leaf senescence
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048364	root development
biological_process	GO:0008150	biological_process
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020986.2.1	MELO3C020986.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..175
IPR033244	Mediator of RNA polymerase II transcription subunit 32	PANTHER	PTHR35989	FAMILY NOT NAMED	coord: 30..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020986.2	Csa2G245440	Cucumber (Chinese Long) v2	cumedB086
MELO3C020986.2	CSPI02G12070	Wild cucumber (PI 183967)	cpimedB086
MELO3C020986.2	Cucsa.109730	Cucumber (Gy14) v1	cgymedB149
MELO3C020986.2	CmaCh02G004110	Cucurbita maxima (Rimu)	cmamedB635
MELO3C020986.2	CmoCh02G004150	Cucurbita moschata (Rifu)	cmomedB623
MELO3C020986.2	CmoCh20G008700	Cucurbita moschata (Rifu)	cmomedB574
MELO3C020986.2	Lsi10G003520	Bottle gourd (USVL1VR-Ls)	lsimedB052
MELO3C020986.2	Cp4.1LG05g12460	Cucurbita pepo (Zucchini)	cpemedB793
MELO3C020986.2	Cp4.1LG16g02300	Cucurbita pepo (Zucchini)	cpemedB299
MELO3C020986.2	CsGy2G012060	Cucumber (Gy14) v2	cgybmedB078
MELO3C020986.2	Cla016549	Watermelon (97103) v1	medwmB131
MELO3C020986.2	ClCG11G004520	Watermelon (Charleston Gray)	medwcgB081
MELO3C020986.2	Cla97C11G211280	Watermelon (97103) v2	medwmbB083
MELO3C020986.2	Bhi10G001633	Wax gourd	medwgoB137
MELO3C020986.2	Carg22954	Silver-seed gourd	carmedB0887
MELO3C020986.2	CsaV3_2G014570	Cucumber (Chinese Long) v3	cucmedB093

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020986.2	Wild cucumber (PI 183967)	cpimedB263
MELO3C020986.2	Cucumber (Chinese Long) v2	cumedB263
MELO3C020986.2	Bottle gourd (USVL1VR-Ls)	lsimedB448