MELO3C020004 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAACTGTAAGGTTTCCATTAAAATAATACTACAAGAAATAAAAAAGAGAAAGCGACTTTTTCTTCATATTCAGCCTCTGAGAGAAGAAGAAAGAGGGAATGCTTTGAATTTGGAAGTTAAAAAATTCTTCAATTGCGTGAAATCCATTTCCATCTTTGCTTTCGGATTTCTCGATCATACAAAAACAAAAACCCCAACTCTTCTCCACCTTCAATTTTGACTCTAAACCTCCACAATTCTGTCTGACCGGACCCGACCAATTGATAACTGCAATGGTCGATCTTTCCGATACAGCTGCCGGAAACGTTGAAGCTGACGGGAAAGACATACCCTGCACCTCATGTGACCGCCAAACTTTACTCCACCAGTCCATGGGCGGCGGTAAAGGTATTTCAATTCTCCTTATATAACTTCGTTGTATCTCGATCAATTTCGCGTTTCTGAATTAGATTCCTTCGACCCCTTTTCGAGAATTGATTTGAATCTGATGGCTGAAATCGGTGATTCTTGAGGGTTTTTATTTTTTATGATTCACTGGATGATATGAAGCTTCAATTTAAGTGTTTTCTCAAATGGGTTTGCCTGATTCGTTGCTATTCTTTTCATTTATCTGTTTGTTTCCCTTTTTGGTATTTGAATTGCGACTTTGACTGGTTGAAACTTGAAGTTTTTGTTGCCTTTTTGCTTTGGGAATCGGATTCTACATTGGCTATTTTCCCAGTTTTATTACAAATTTCTTGAGTGGTTTTCATGTTTCTTCTTTGTGTCTTATAAGGAAAAATTAAAAACAATGATGATATTCCCCTTTCTAGTTTGATAATCAAGAATTTTGACCCTTTGTTCTTTTGCATAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTTTCTTTCGGCATTATTGTTGTTTCTACGGTATTTTGGCTTCTAATTGAGCACTCTGGATTGCCATTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTACGCTGCATTCCGAAACAAGTACGGTTATGGCTGACTTATGTTTTGATTCACTCTGAAGTTCTTGCATATCGCAGTCTTTTACAGATTACTTTTTGCTTATACTACTTTGTTCTTCCAGCAGATAATTTGTTTTCCTTGTTAGCTTTTCTTCATTTTCTCTCTTTATGCAGGCAACTTCAAACATTACCGCAGCTGGTACTGTCGGAGGAGTTTGTCAACAACGTAGCAGCATCGCTTCGGGCGAAAATCAATAACACGTTACTTATGGCTCATGATATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGGTTAGTATTTGAAGCAACATTGAATGCGTGAATTATCATACGTGTGATGCATACTTTTTAGTCCTAATATCCCATATTATTGGAACTTGAATTAAATGGCCAAAACTGATTAGTATTTATTGGGTTCAAGTACTTTTCCTCTGGAAATAAGAAATTTAAGATATCCAATATAATATACGCCTTCGATGATGCCATTTGGATGAGGCAACCATGAGTGGCTCAAGCCTCAGGTAGTGAATGATTTACAGGACAGTTTCAAGAATGCATGAACTTAATATTCACTTCAAGAGCATAATGTTGACTTGCTACTTCTTTTGTTTTTGGCTGCAATAATTTGATTAACCTTGCAAACACCTTTTGCAGATGGTGATCGGTTTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGTATGTATGAACATCCTAAAACACTTGCATTGACATATCTTTAGTTTGTATACGTTTCATCTCTTGGTAAATTACAGTAATCAGTCACATTACTTCATTTTGATCCTCACCGACGAGTAAACATTCAGAAAATTTTGTTTGTTTTGTCCATACATCATTTCCTTTCATGTTTTTTGCTCCCATGAAATGAATACCCCTTTGTAATTGAGTCTTCTTAACGTAGGATGTTGATTTTTTCCATGTAACTGGATTACAGGAACAATCATCTCAATAACCATCCCTGCTTTGTACAGCAAATACGATAAACATGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATCGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAATTTATCCAAGGATAAAAATCAGTGAAGAAACTCTGCCTTTAATTTTCTATAGTTTAACTGAAACCACAGGAAAATTGTAACAATGTTTCATCACGAAGGAATGCCTTGTTAACTGGATTCTTGAAGGTTATTGCTTGGCCATGTGTATTTCATACCCCAAGGTTTAATGATTTCAACCATTCTAGATCAGATATCACACATGTTT CAAACTGTAAGGTTTCCATTAAAATAATACTACAAGAAATAAAAAAGAGAAAGCGACTTTTTCTTCATATTCAGCCTCTGAGAGAAGAAGAAAGAGGGAATGCTTTGAATTTGGAAGTTAAAAAATTCTTCAATTGCGTGAAATCCATTTCCATCTTTGCTTTCGGATTTCTCGATCATACAAAAACAAAAACCCCAACTCTTCTCCACCTTCAATTTTGACTCTAAACCTCCACAATTCTGTCTGACCGGACCCGACCAATTGATAACTGCAATGGTCGATCTTTCCGATACAGCTGCCGGAAACGTTGAAGCTGACGGGAAAGACATACCCTGCACCTCATGTGACCGCCAAACTTTACTCCACCAGTCCATGGGCGGCGGTAAAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTTTCTTTCGGCATTATTGTTGTTTCTACGGTATTTTGGCTTCTAATTGAGCACTCTGGATTGCCATTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTACGCTGCATTCCGAAACAAGCAACTTCAAACATTACCGCAGCTGGTACTGTCGGAGGAGTTTGTCAACAACGTAGCAGCATCGCTTCGGGCGAAAATCAATAACACGTTACTTATGGCTCATGATATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGTTTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGAACAATCATCTCAATAACCATCCCTGCTTTGTACAGCAAATACGATAAACATGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATCGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAATTTATCCAAGGATAAAAATCAGTGAAGAAACTCTGCCTTTAATTTTCTATAGTTTAACTGAAACCACAGGAAAATTGTAACAATGTTTCATCACGAAGGAATGCCTTGTTAACTGGATTCTTGAAGGTTATTGCTTGGCCATGTGTATTTCATACCCCAAGGTTTAATGATTTCAACCATTCTAGATCAGATATCACACATGTTT ATGGTCGATCTTTCCGATACAGCTGCCGGAAACGTTGAAGCTGACGGGAAAGACATACCCTGCACCTCATGTGACCGCCAAACTTTACTCCACCAGTCCATGGGCGGCGGTAAAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTTTCTTTCGGCATTATTGTTGTTTCTACGGTATTTTGGCTTCTAATTGAGCACTCTGGATTGCCATTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTACGCTGCATTCCGAAACAAGCAACTTCAAACATTACCGCAGCTGGTACTGTCGGAGGAGTTTGTCAACAACGTAGCAGCATCGCTTCGGGCGAAAATCAATAACACGTTACTTATGGCTCATGATATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGTTTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGAACAATCATCTCAATAACCATCCCTGCTTTGTACAGCAAATACGATAAACATGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATCGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAATTTATCCAAGGATAAAAATCAGTGA MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ*
BLAST of MELO3C020004 vs. Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.5e-67 Identity = 122/214 (57.01%), Postives = 164/214 (76.64%), Query Frame = 1
BLAST of MELO3C020004 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 5.6e-33 Identity = 72/199 (36.18%), Postives = 111/199 (55.78%), Query Frame = 1
BLAST of MELO3C020004 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31 Identity = 66/190 (34.74%), Postives = 106/190 (55.79%), Query Frame = 1
BLAST of MELO3C020004 vs. Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.5e-30 Identity = 64/191 (33.51%), Postives = 106/191 (55.50%), Query Frame = 1
BLAST of MELO3C020004 vs. Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30 Identity = 70/195 (35.90%), Postives = 107/195 (54.87%), Query Frame = 1
BLAST of MELO3C020004 vs. TrEMBL
Match: A0A0A0KBS2_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G014530 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-118 Identity = 213/224 (95.09%), Postives = 221/224 (98.66%), Query Frame = 1
BLAST of MELO3C020004 vs. TrEMBL
Match: A0A067JFU4_JATCU (Reticulon-like protein OS=Jatropha curcas GN=JCGZ_03329 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 2.4e-75 Identity = 137/198 (69.19%), Postives = 166/198 (83.84%), Query Frame = 1
BLAST of MELO3C020004 vs. TrEMBL
Match: A0A061FTL9_THECC (Reticulon-like protein OS=Theobroma cacao GN=TCM_045537 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73 Identity = 134/198 (67.68%), Postives = 166/198 (83.84%), Query Frame = 1
BLAST of MELO3C020004 vs. TrEMBL
Match: V4TC73_9ROSI (Reticulon-like protein OS=Citrus clementina GN=CICLE_v10032603mg PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.8e-71 Identity = 129/198 (65.15%), Postives = 163/198 (82.32%), Query Frame = 1
BLAST of MELO3C020004 vs. TrEMBL
Match: M1BDS1_SOLTU (Reticulon-like protein OS=Solanum tuberosum GN=PGSC0003DMG400016636 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 4.7e-71 Identity = 135/197 (68.53%), Postives = 163/197 (82.74%), Query Frame = 1
BLAST of MELO3C020004 vs. TAIR10
Match: AT3G10915.5 (AT3G10915.5 Reticulon family protein) HSP 1 Score: 238.4 bits (607), Expect = 4.2e-63 Identity = 122/237 (51.48%), Postives = 164/237 (69.20%), Query Frame = 1
BLAST of MELO3C020004 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2) HSP 1 Score: 142.5 bits (358), Expect = 3.1e-34 Identity = 72/199 (36.18%), Postives = 111/199 (55.78%), Query Frame = 1
BLAST of MELO3C020004 vs. TAIR10
Match: AT3G10260.3 (AT3G10260.3 Reticulon family protein) HSP 1 Score: 134.4 bits (337), Expect = 8.6e-32 Identity = 64/191 (33.51%), Postives = 106/191 (55.50%), Query Frame = 1
BLAST of MELO3C020004 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31 Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 1
BLAST of MELO3C020004 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein) HSP 1 Score: 131.3 bits (329), Expect = 7.3e-31 Identity = 67/190 (35.26%), Postives = 107/190 (56.32%), Query Frame = 1
BLAST of MELO3C020004 vs. NCBI nr
Match: gi|659113825|ref|XP_008456773.1| (PREDICTED: reticulon-like protein B16 [Cucumis melo]) HSP 1 Score: 449.5 bits (1155), Expect = 3.4e-123 Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1
BLAST of MELO3C020004 vs. NCBI nr
Match: gi|449441250|ref|XP_004138395.1| (PREDICTED: reticulon-like protein B16 [Cucumis sativus]) HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-118 Identity = 213/224 (95.09%), Postives = 221/224 (98.66%), Query Frame = 1
BLAST of MELO3C020004 vs. NCBI nr
Match: gi|659134173|ref|XP_008467064.1| (PREDICTED: reticulon-like protein B16 [Cucumis melo]) HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78 Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 1
BLAST of MELO3C020004 vs. NCBI nr
Match: gi|1000962534|ref|XP_002520859.2| (PREDICTED: reticulon-like protein B16 isoform X2 [Ricinus communis]) HSP 1 Score: 292.0 bits (746), Expect = 9.1e-76 Identity = 134/198 (67.68%), Postives = 166/198 (83.84%), Query Frame = 1
BLAST of MELO3C020004 vs. NCBI nr
Match: gi|802778465|ref|XP_012091153.1| (PREDICTED: reticulon-like protein B16 isoform X1 [Jatropha curcas]) HSP 1 Score: 290.0 bits (741), Expect = 3.5e-75 Identity = 137/198 (69.19%), Postives = 166/198 (83.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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