Cp4.1LG01g22020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionReticulon-like protein
LocationCp4.1LG01 : 20483902 .. 20486303 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTGTGATATAATTTAATGTTGGTTGATAAAATTCATTTCCAGGGCATGAAGAAAGAGGAAGGCTTAGAGCTTGGAAATTAAAAATTCTTCAATTGCGTGAAACCGTTTCTAGCTTTGGCTTGGGAACTCTCGATCATATAGAAATCTCAAGAACGTTTCGAGCTGCAATTTTGACTCTGAAACGTTCCTCACCAGAATTCAGGCTGGCCAGAGCAATTCGGAAGTGCAATGGTAGATAATTCCGGTAGCGCCGGTACTGTAGAAGGCGACGGCAAAGATATAGCCTGCATTTCATGTGACCGGCAAGTTTCACTCCACCAGTCTATGGGTGGCGGCAAAGGTATTCAATTCTTCTCCCGCTAAATTTATCAGTGTCTTGATCAATTTCGCTCGATTCCTTTGTTCCCCTTTCGAGAATTGATGTTGAATCTGTTAGCTGCAATCGCCGATACTTTAGGGTTTTGATNGTGAAGCTAGAATTCAAGTCATCAAGGGTGTTCTGAAATGGTTTGGTGGATTCGTCGATATTCTGTTCATTTACCTGTTTCCATTTTTGTATTTGAATTGAGACTTTGACCGGTTGAAACTTGAAGGTGTTTGTTATCTTTTTCCTTGGGAAATGGACTATATTGCCTTGAATCCAGTTTACTTCAAAATTCGAGAATGGTTTTGATGTTCCTTTGATGTGTATTTGAGGGAAGAAAATGATGATATTTCCTTTACTGTTTTGATCATCGAGAATGTTGACTCTTTTGCTACTTCTGCATAGCGGCTGATGTTCTACTGTGGAAACAGCGGCATGTTTCTTTCGGCATTGTTGTCGTTGCGACCGTGTTTTGGCTTCTTATTGAGCACTCTGGGATGCCATTGCTAACAATAAGTTCAGATGTCCTGCTGGTTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCGCTTCGTCACAAGTATGGCAATGGCTGACTTTTATTTTGATTCACTGTGAAGTTCTTCCATTTCATAATCTTTAACACAGTACTTTTTGCTCATATTATCTTCTTCTTCCAAGAAGATGGTATGTTTTCCTTGTTAGCTCTTCTTCATTTTCCCTCCATATGCAGGCCAATTCAAACATTACCACAGCTAGTATTGTCAGAGGAATTTGTCGATAGCGTTGCAGCATCATTTCGGGGGAAAATCAACAATGCATTACTTATGGCTCATGACATCACACTTGGGAATGATTTTAAACGCTTTTTCAGGGTTAGTATTTCGAATGATCATGCATTTTATTGTACATTATGATTCCTTATATCCTATCTAATTGGATATGTGAACTAAATGGGCAAAACTAACAAAGGTTTATCAGCTTTAAGTACTCTTCCTTTGAAAATAATAGATTAGTACTCATTTACACCATCAATGATGCCAGTTAGATCTGCAACCATAAGTAGCTAAAGCCCGAGGCAAAGAAAGCTACTTCAAAGAATACGTACATTTGATATTTTAACTTCAAGAGCGTAATATTTCCTTTCAGCTTCTTCATATCTGGTTGCACTAGTATGAGTAATCTTGCACAACTTTGCAGGTGGTGATTTGTTTGTGGCTTCTATCCGTCCTTGGTAGCTACCTTTCTTTCTTCACCTTTGCATATATCGGTATGTACGAACATCCTAAACCGCTTCTATGACATATTTTTAGTTTGTATGCATTTCATCTGTGGGTAAGTTACGGCAATCATCCAACTTGTAACATTTTCTTTTTCGAGTTTGCCCTAAACTTAATATTGATTTTTGGCCATTTGACTCGGTGACAGGAACAATCATCTCAATAACTGTCCCCGCCTTGTACAACAAATACAATAAACACGTCGATAGATATTTTGGAATGATCTTCCAAGAGTTTAGAAAGCATTACAAAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAGTTTTTCTAAGGATAAGGATCAATGAAAAATGCCGACTATAATTTTCTCAAGTTGTACTAAACCACAGGAAAATTGTAACACTGTTTCATCCCAAATGAATGCCTGGCTAACTGGACTCTTGAAGGCTATTACTCGGCCGTGTATTCCTAGGTTTAATGATTTGAACCACCCGGATCAAATATCACAGATTCTTGTTCTTAGTTGCTACAGAAAAAGACGAGGGTTGGTTTGTTTATCCATTTCCACTTTGTCAAATATGGATCAGCCCACAGAGAAAGGCCCATTGTTGAATGCCAAACAAATATGGATCATTCATATTTGGTATATTGTTCCATGTAAATGCCACACTACATATATAGACGAACAGATGAAAAGCGTTATAATTGTGGGAAAAGTCAAAAAAAGGGGGAAGAGAGTAGAGTGGTGTCCCATTAATTTGATGGTAATATGATTTCTCTTC

mRNA sequence

TATTGTGATATAATTTAATGTTGGTTGATAAAATTCATTTCCAGGGCATGAAGAAAGAGGAAGGCTTAGAGCTTGGAAATTAAAAATTCTTCAATTGCGTGAAACCGTTTCTAGCTTTGGCTTGGGAACTCTCGATCATATAGAAATCTCAAGAACGTTTCGAGCTGCAATTTTGACTCTGAAACGTTCCTCACCAGAATTCAGGCTGGCCAGAGCAATTCGGAAGTGCAATGGTAGATAATTCCGGTAGCGCCGGTACTGTAGAAGGCGACGGCAAAGATATAGCCTGCATTTCATGTGACCGGCAAGTTTCACTCCACCAGTCTATGGGTGGCGGCAAAGCGGCTGATGTTCTACTGTGGAAACAGCGGCATGTTTCTTTCGGCATTGTTGTCGTTGCGACCGTGTTTTGGCTTCTTATTGAGCACTCTGGGATGCCATTGCTAACAATAAGTTCAGATGTCCTGCTGGTTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCGCTTCGTCACAAGCCAATTCAAACATTACCACAGCTAGTATTGTCAGAGGAATTTGTCGATAGCGTTGCAGCATCATTTCGGGGGAAAATCAACAATGCATTACTTATGGCTCATGACATCACACTTGGGAATGATTTTAAACGCTTTTTCAGGGTGGTGATTTGTTTGTGGCTTCTATCCGTCCTTGGTAGCTACCTTTCTTTCTTCACCTTTGCATATATCGGAACAATCATCTCAATAACTGTCCCCGCCTTGTACAACAAATACAATAAACACGTCGATAGATATTTTGGAATGATCTTCCAAGAGTTTAGAAAGCATTACAAAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAGTTTTTCTAAGGATAAGGATCAATGAAAAATGCCGACTATAATTTTCTCAAGTTGTACTAAACCACAGGAAAATTGTAACACTGTTTCATCCCAAATGAATGCCTGGCTAACTGGACTCTTGAAGGCTATTACTCGGCCGTGTATTCCTAGGTTTAATGATTTGAACCACCCGGATCAAATATCACAGATTCTTGTTCTTAGTTGCTACAGAAAAAGACGAGGGTTGGTTTGTTTATCCATTTCCACTTTGTCAAATATGGATCAGCCCACAGAGAAAGGCCCATTGTTGAATGCCAAACAAATATGGATCATTCATATTTGGTATATTGTTCCATGTAAATGCCACACTACATATATAGACGAACAGATGAAAAGCGTTATAATTGTGGGAAAAGTCAAAAAAAGGGGGAAGAGAGTAGAGTGGTGTCCCATTAATTTGATGGTAATATGATTTCTCTTC

Coding sequence (CDS)

ATGGTAGATAATTCCGGTAGCGCCGGTACTGTAGAAGGCGACGGCAAAGATATAGCCTGCATTTCATGTGACCGGCAAGTTTCACTCCACCAGTCTATGGGTGGCGGCAAAGCGGCTGATGTTCTACTGTGGAAACAGCGGCATGTTTCTTTCGGCATTGTTGTCGTTGCGACCGTGTTTTGGCTTCTTATTGAGCACTCTGGGATGCCATTGCTAACAATAAGTTCAGATGTCCTGCTGGTTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCGCTTCGTCACAAGCCAATTCAAACATTACCACAGCTAGTATTGTCAGAGGAATTTGTCGATAGCGTTGCAGCATCATTTCGGGGGAAAATCAACAATGCATTACTTATGGCTCATGACATCACACTTGGGAATGATTTTAAACGCTTTTTCAGGGTGGTGATTTGTTTGTGGCTTCTATCCGTCCTTGGTAGCTACCTTTCTTTCTTCACCTTTGCATATATCGGAACAATCATCTCAATAACTGTCCCCGCCTTGTACAACAAATACAATAAACACGTCGATAGATATTTTGGAATGATCTTCCAAGAGTTTAGAAAGCATTACAAAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAGTTTTTCTAAGGATAAGGATCAATGA

Protein sequence

MVDNSGSAGTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ
Homology
[Close]
BLAST of Cp4.1LG01g22020 vs. Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.4e-63
Identity = 113/198 (57.07%), Postives = 160/198 (80.81%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQ+++HQ MGGGKAAD+LLW++RH+S G+++++TV WL+ E SG+P L++SSDVLL++++
Sbjct: 28  RQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIM 87

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           + F+ A  +A R++ + +LP+LVLSEE V+S AASFR K+N+ L+MAHD+T+GNDF+ FF
Sbjct: 88  ISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFF 147

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
           +VVICLWLLS +GSY+S  T  YIGTI+S+T+PALY+KY   VD+  G I +    HYK+
Sbjct: 148 KVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKI 207

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DE+V SRL  S SKDKD
Sbjct: 208 VDENVISRLSWSLSKDKD 225

[Close]
BLAST of Cp4.1LG01g22020 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.2e-31
Identity = 74/197 (37.56%), Postives = 111/197 (56.35%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK AD+ +WK + +S G+   ATV W+L E     LLT+   V++V + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           +LFL +N     HK    +P++ + EE +  +A+  R +IN  +    +I  G D K+F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
             +  LW+LS+LG   SF T AYI  ++  TVP  Y+KY   VD Y      E +K Y V
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 205 MDESVFSRLPGSFSKDK 222
           +D  VFS++P    KDK
Sbjct: 252 LDAKVFSKIPRGPLKDK 268

[Close]
BLAST of Cp4.1LG01g22020 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.7e-29
Identity = 69/197 (35.03%), Postives = 111/197 (56.35%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGG  ADV LW+ + +S  ++ VAT  W+L E      L++   +L+  + 
Sbjct: 55  REKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALA 114

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
            LFL +N  A  +K    +P++ + EE    + ++ R ++N A ++   I LG D K+F 
Sbjct: 115 ALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFL 174

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
            VV  LW++SV+G++ +F T  YI  ++  TVP LY K+   VD       +E +KHY V
Sbjct: 175 MVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMV 234

Query: 205 MDESVFSRLPGSFSKDK 222
            DE V S+LP +  K K
Sbjct: 235 FDEKVLSKLPVASLKAK 251

[Close]
BLAST of Cp4.1LG01g22020 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 72/197 (36.55%), Postives = 114/197 (57.87%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK ADV LW+ + +S  ++ VAT  W+L E     LL++   + ++ + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
            LFL +N   L +K    +P++ + EE    VA+S R ++N A ++   I LG D K+F 
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
            VV+ LW++SV+G++ +F T  YI  +I  TVP LY K+   VD       +E +K Y V
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 205 MDESVFSRLPGSFSKDK 222
            DE V S++P +  K K
Sbjct: 235 FDEKVLSKIPIASLKAK 251

[Close]
BLAST of Cp4.1LG01g22020 vs. Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 74/223 (33.18%), Postives = 118/223 (52.91%), Query Frame = 1 

Query: 3   DNSGSAGTVEGDGKDIACISCD------RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVV 62
           D+S S+ +   D K+ A +         R+  LH+  GGGK AD+ LW+ + VS G++  
Sbjct: 23  DDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGA 82

Query: 63  ATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSV 122
           ATV W+L E     LLT+   + ++ + +LFL ++ +   HK    +P++ + E+ V  +
Sbjct: 83  ATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQL 142

Query: 123 AASFRGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITV 182
           A+  R +IN    +  DI  G D K+F  V+  LW+LS +GS  +F T  YI T++  T+
Sbjct: 143 ASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTI 202

Query: 183 PALYNKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSK 220
           P LY KY   VD +     +E +K Y   D  V S++     K
Sbjct: 203 PVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245

[Close]
BLAST of Cp4.1LG01g22020 vs. TrEMBL
Match: A0A0A0KBS2_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_6G014530 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.3e-93
Identity = 178/224 (79.46%), Postives = 200/224 (89.29%), Query Frame = 1 

Query: 1   MVDNSGSA-GTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATV 60
           MVD S +A G+ E DGKDI C SCDRQ  LHQSMGGGKAAD+LLWKQ HVS G++VV+TV
Sbjct: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60

Query: 61  FWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAAS 120
           FWLLIEHSG+PLLT  SDVLL+LVVLLFLRANFAA R+K +QTLPQLVLSEEFV++VAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 FRGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180
            R KINN LLMAHDIT+GNDFK FFR+VI LWLLSV+GSY+SFFTFAY+GTIISIT+PAL
Sbjct: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180

Query: 181 YNKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           Y+KY+KHVDRY GMI Q+FRKHY+VMDESVFSRLPG  SKDKDQ
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]
BLAST of Cp4.1LG01g22020 vs. TrEMBL
Match: A0A067JFU4_JATCU (Reticulon-like protein OS=Jatropha curcas GN=JCGZ_03329 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.2e-73
Identity = 141/198 (71.21%), Postives = 166/198 (83.84%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQVSLHQ MGGGKAADVLLWK+RHVSFG++VVATV W + E SG+P LTI SDVLLV+ V
Sbjct: 43  RQVSLHQFMGGGKAADVLLWKRRHVSFGVIVVATVAWFIFERSGLPFLTICSDVLLVVTV 102

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           LLF  ANFA +R+K  Q+LP+LVLSEE V + AASFR KINN LLMAHDIT+G DF+ FF
Sbjct: 103 LLFFHANFAVIRNKQPQSLPELVLSEEMVHNAAASFRVKINNMLLMAHDITIGKDFRLFF 162

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
           +VV+CLWLLS +GSYLSFFT AYIGTI+SIT+PALY+KY + VDRY GMI ++   HYK+
Sbjct: 163 KVVVCLWLLSAIGSYLSFFTLAYIGTILSITIPALYSKYEERVDRYCGMIHRKLSHHYKI 222

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DESV SR+P S SKDKD
Sbjct: 223 VDESVISRIPQSLSKDKD 240

[Close]
BLAST of Cp4.1LG01g22020 vs. TrEMBL
Match: M5XKE0_PRUPE (Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa010739mg PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 6.7e-70
Identity = 144/237 (60.76%), Postives = 179/237 (75.53%), Query Frame = 1 

Query: 1   MVDNSGSAGTVEGDG---KDIACISCD------------RQVSLHQSMGGGKAADVLLWK 60
           M++NS      EGDG   K +A  S              RQ S+H S+GGG+AADVLLWK
Sbjct: 1   MMENSQDLCNTEGDGDGRKAVASTSYTPTAGSSGYRLFGRQGSVHNSLGGGQAADVLLWK 60

Query: 61  QRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQ 120
           +  VSFG +VVAT+ WLL E SG+  L+I SDVLL+LVVLLFLRAN+A  R+K +QTLP+
Sbjct: 61  RGRVSFGAIVVATISWLLFERSGLSFLSICSDVLLILVVLLFLRANYAVFRNKQLQTLPE 120

Query: 121 LVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTF 180
           LVLSEE V++ AASFR KINN LLMAHDITLG DF+ FF+VV+CLWLLSV+GS+ SFFT 
Sbjct: 121 LVLSEEMVNNAAASFRVKINNVLLMAHDITLGKDFRLFFKVVVCLWLLSVIGSFFSFFTL 180

Query: 181 AYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKD 223
           AYIG+IIS+T+PALY+KY + VDR +G I ++F KHYK++DE VF+RLP +  KDKD
Sbjct: 181 AYIGSIISVTLPALYSKYEETVDRCYGKIHRQFSKHYKIVDEGVFNRLPRNAPKDKD 237

[Close]
BLAST of Cp4.1LG01g22020 vs. TrEMBL
Match: M1BDS1_SOLTU (Reticulon-like protein OS=Solanum tuberosum GN=PGSC0003DMG400016636 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-67
Identity = 134/198 (67.68%), Postives = 163/198 (82.32%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+ S HQ MGGGKAADV+LW++R VSFGI+V ATV W++ E+S +P L++SSDVLL+L+V
Sbjct: 41  RETSFHQMMGGGKAADVILWRRRRVSFGIIVAATVAWIIFEYSELPFLSVSSDVLLILIV 100

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           LLFLRAN+AA R K +  LP+LVLSEE V++ AASFR KIN  LLMAHDITLG DFK FF
Sbjct: 101 LLFLRANYAAFRKKQLPALPELVLSEEMVNNAAASFRVKINYMLLMAHDITLGKDFKLFF 160

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
           +VVI LWLLSV+GS +SFFT AYIGTII ITVPALYNK+  HVDRY G I ++  +HYK+
Sbjct: 161 KVVIVLWLLSVIGSVISFFTLAYIGTIIFITVPALYNKFEDHVDRYAGKIHRQLSRHYKI 220

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DES+ SRLP S SKDK+
Sbjct: 221 VDESI-SRLPRSISKDKE 237

[Close]
BLAST of Cp4.1LG01g22020 vs. TrEMBL
Match: A0A061FTL9_THECC (Reticulon-like protein OS=Theobroma cacao GN=TCM_045537 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-67
Identity = 129/198 (65.15%), Postives = 164/198 (82.83%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQ SLHQ +GGG+ AD+LLWK+   SFG++VVATV WL+ E SG+P L+I SDVLL+L+V
Sbjct: 34  RQGSLHQFLGGGEVADILLWKRWRDSFGVIVVATVAWLIFEQSGLPFLSICSDVLLILIV 93

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           LLF+RAN+AALR++ +QTLP+L LSEE V++ AASFR KINN LLMAHDIT+G DF+ FF
Sbjct: 94  LLFVRANYAALRNRQLQTLPELELSEEMVNNAAASFRVKINNVLLMAHDITIGKDFRLFF 153

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
           +VVICLWLLS +GSY SFFT AYIGTI+SIT+P  YNKY + VD+  GMI ++F +HYK+
Sbjct: 154 KVVICLWLLSAIGSYCSFFTLAYIGTILSITIPVFYNKYEERVDKCCGMIHRKFSQHYKI 213

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DESV +R+P S  K+KD
Sbjct: 214 VDESVTNRIPRSLFKEKD 231

[Close]
BLAST of Cp4.1LG01g22020 vs. TAIR10
Match: AT3G10915.5 (AT3G10915.5 Reticulon family protein)

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59
Identity = 113/221 (51.13%), Postives = 160/221 (72.40%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGK----------------------AADVLLWKQRHVSFGIVVVATVFWL 84
           RQ+++HQ MGGGK                      AAD+LLW++RH+S G+++++TV WL
Sbjct: 28  RQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRRRHLSLGVIIISTVAWL 87

Query: 85  LIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRG 144
           + E SG+P L++SSDVLL+++++ F+ A  +A R++ + +LP+LVLSEE V+S AASFR 
Sbjct: 88  IFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRI 147

Query: 145 KINNALLMAHDITLGNDFKRFFR-VVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYN 204
           K+N+ L+MAHD+T+GNDF+ FF+ VVICLWLLS +GSY+S  T  YIGTI+S+T+PALY+
Sbjct: 148 KLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYS 207

Query: 205 KYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKD 223
           KY   VD+  G I +    HYK++DE+V SRL  S SKDKD
Sbjct: 208 KYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 248

[Close]
BLAST of Cp4.1LG01g22020 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 74/197 (37.56%), Postives = 111/197 (56.35%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK AD+ +WK + +S G+   ATV W+L E     LLT+   V++V + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           +LFL +N     HK    +P++ + EE +  +A+  R +IN  +    +I  G D K+F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
             +  LW+LS+LG   SF T AYI  ++  TVP  Y+KY   VD Y      E +K Y V
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 205 MDESVFSRLPGSFSKDK 222
           +D  VFS++P    KDK
Sbjct: 252 LDAKVFSKIPRGPLKDK 268

[Close]
BLAST of Cp4.1LG01g22020 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 72/197 (36.55%), Postives = 114/197 (57.87%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK ADV LW+ + +S  ++ VAT  W+L E     LL++   + ++ + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
            LFL +N   L +K    +P++ + EE    VA+S R ++N A ++   I LG D K+F 
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
            VV+ LW++SV+G++ +F T  YI  +I  TVP LY K+   VD       +E +K Y V
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 205 MDESVFSRLPGSFSKDK 222
            DE V S++P +  K K
Sbjct: 235 FDEKVLSKIPIASLKAK 251

[Close]
BLAST of Cp4.1LG01g22020 vs. TAIR10
Match: AT3G10260.3 (AT3G10260.3 Reticulon family protein)

HSP 1 Score: 124.4 bits (311), Expect = 8.8e-29
Identity = 66/199 (33.17%), Postives = 110/199 (55.28%), Query Frame = 1 

Query: 24  DRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLV 83
           DRQ  +H  +GGGK+ADVLLW+ + +S  +++ AT  W+L E      L++    LL+ +
Sbjct: 67  DRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGM 126

Query: 84  VLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRF 143
           +  F+ +N +   ++    +P+LVL ++F   V  +   ++N  LL   D+    + K+F
Sbjct: 127 IAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQF 186

Query: 144 FRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYK 203
              VI LW+ +++GS  +F T  YIG + + T+P LY +Y   VD +   +  +F  HYK
Sbjct: 187 LMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYK 246

Query: 204 VMDESVFSRLP-GSFSKDK 222
            +D    SR+P G F   K
Sbjct: 247 KLDTGFLSRIPSGKFGLKK 265

[Close]
BLAST of Cp4.1LG01g22020 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           R+  +H+ +GGGK AD+ +WK + +S G++  AT  W++ E     LLT+   V++V++ 
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLA 135

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           +LFL +N     +K    +P++ + EE +  +A+  R +IN       +I  G D K+F 
Sbjct: 136 VLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 195

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
             +  LW+LS+LG   +F T AYI  ++  TVP  Y+KY   VD        E +K Y V
Sbjct: 196 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 255

Query: 205 MDESVFSRLPGSFSKDK 222
           +DE V S++P    K+K
Sbjct: 256 LDEKVLSKIPLGPLKNK 272

[Close]
BLAST of Cp4.1LG01g22020 vs. NCBI nr
Match: gi|659113825|ref|XP_008456773.1| (PREDICTED: reticulon-like protein B16 [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 3.3e-94
Identity = 181/224 (80.80%), Postives = 202/224 (90.18%), Query Frame = 1 

Query: 1   MVDNSGSA-GTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATV 60
           MVD S +A G VE DGKDI C SCDRQ  LHQSMGGGKAAD+LLWKQ HVSFGI+VV+TV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAAS 120
           FWLLIEHSG+PLLT  SDVLL+LVVLLFLRAN+AA R+K +QTLPQLVLSEEFV++VAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 FRGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180
            R KINN LLMAHDITLGNDFK FFR+VI LWLLSV+GSY+SFFTFAYIGTIISIT+PAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YNKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           Y+KY+KHVDRY GMI Q+FRKHY+VMDESVFSRLPG+ SKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]
BLAST of Cp4.1LG01g22020 vs. NCBI nr
Match: gi|449441250|ref|XP_004138395.1| (PREDICTED: reticulon-like protein B16 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 4.8e-93
Identity = 178/224 (79.46%), Postives = 200/224 (89.29%), Query Frame = 1 

Query: 1   MVDNSGSA-GTVEGDGKDIACISCDRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATV 60
           MVD S +A G+ E DGKDI C SCDRQ  LHQSMGGGKAAD+LLWKQ HVS G++VV+TV
Sbjct: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60

Query: 61  FWLLIEHSGMPLLTISSDVLLVLVVLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAAS 120
           FWLLIEHSG+PLLT  SDVLL+LVVLLFLRANFAA R+K +QTLPQLVLSEEFV++VAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 FRGKINNALLMAHDITLGNDFKRFFRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180
            R KINN LLMAHDIT+GNDFK FFR+VI LWLLSV+GSY+SFFTFAY+GTIISIT+PAL
Sbjct: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180

Query: 181 YNKYNKHVDRYFGMIFQEFRKHYKVMDESVFSRLPGSFSKDKDQ 224
           Y+KY+KHVDRY GMI Q+FRKHY+VMDESVFSRLPG  SKDKDQ
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]
BLAST of Cp4.1LG01g22020 vs. NCBI nr
Match: gi|802778465|ref|XP_012091153.1| (PREDICTED: reticulon-like protein B16 isoform X1 [Jatropha curcas])

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-73
Identity = 141/198 (71.21%), Postives = 166/198 (83.84%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQVSLHQ MGGGKAADVLLWK+RHVSFG++VVATV W + E SG+P LTI SDVLLV+ V
Sbjct: 43  RQVSLHQFMGGGKAADVLLWKRRHVSFGVIVVATVAWFIFERSGLPFLTICSDVLLVVTV 102

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           LLF  ANFA +R+K  Q+LP+LVLSEE V + AASFR KINN LLMAHDIT+G DF+ FF
Sbjct: 103 LLFFHANFAVIRNKQPQSLPELVLSEEMVHNAAASFRVKINNMLLMAHDITIGKDFRLFF 162

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
           +VV+CLWLLS +GSYLSFFT AYIGTI+SIT+PALY+KY + VDRY GMI ++   HYK+
Sbjct: 163 KVVVCLWLLSAIGSYLSFFTLAYIGTILSITIPALYSKYEERVDRYCGMIHRKLSHHYKI 222

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DESV SR+P S SKDKD
Sbjct: 223 VDESVISRIPQSLSKDKD 240

[Close]
BLAST of Cp4.1LG01g22020 vs. NCBI nr
Match: gi|719987637|ref|XP_010252078.1| (PREDICTED: reticulon-like protein B16 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 273.1 bits (697), Expect = 4.3e-70
Identity = 129/199 (64.82%), Postives = 166/199 (83.42%), Query Frame = 1 

Query: 24  DRQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLV 83
           DRQ ++HQ +GGGKAADV+LWK+RHVSFG+++V+TV WLL E SG+  L+I SD+ L+L+
Sbjct: 40  DRQRTIHQIIGGGKAADVILWKRRHVSFGVIIVSTVAWLLFEQSGLSFLSICSDIFLILI 99

Query: 84  VLLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRF 143
           V+ FLRANFA LR+K +Q LP+LVLSEE V++ AASFR KINN LLMAHDITLG DF+ F
Sbjct: 100 VIQFLRANFAVLRNKQLQPLPELVLSEEMVNNAAASFRVKINNVLLMAHDITLGKDFRLF 159

Query: 144 FRVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYK 203
           F+VV+CLWLLSV+G + SFFT  YIGTIISITVP LYN+Y  HVD+Y G++ Q+F KHY+
Sbjct: 160 FKVVVCLWLLSVIGGFFSFFTLVYIGTIISITVPVLYNRYEDHVDKYAGVVHQKFSKHYR 219

Query: 204 VMDESVFSRLPGSFSKDKD 223
           V+DE++ SR P + +K+KD
Sbjct: 220 VVDENIVSRFPRNLTKEKD 238

[Close]
BLAST of Cp4.1LG01g22020 vs. NCBI nr
Match: gi|1000962534|ref|XP_002520859.2| (PREDICTED: reticulon-like protein B16 isoform X2 [Ricinus communis])

HSP 1 Score: 271.9 bits (694), Expect = 9.7e-70
Identity = 132/198 (66.67%), Postives = 163/198 (82.32%), Query Frame = 1 

Query: 25  RQVSLHQSMGGGKAADVLLWKQRHVSFGIVVVATVFWLLIEHSGMPLLTISSDVLLVLVV 84
           RQ    Q MGGGKAADVLLWK+ HVSF ++++ATV W + E SG+P LTI SDVLLV+ V
Sbjct: 39  RQAPFQQFMGGGKAADVLLWKRWHVSFSVIIIATVAWFIFERSGLPFLTICSDVLLVVTV 98

Query: 85  LLFLRANFAALRHKPIQTLPQLVLSEEFVDSVAASFRGKINNALLMAHDITLGNDFKRFF 144
           LLF+ ANFAA+R+K  Q+LP+LVLSEE V++ AASFR KINN LLMAHDIT+G DFK FF
Sbjct: 99  LLFIHANFAAIRNKQPQSLPELVLSEEMVNNAAASFRVKINNVLLMAHDITIGKDFKLFF 158

Query: 145 RVVICLWLLSVLGSYLSFFTFAYIGTIISITVPALYNKYNKHVDRYFGMIFQEFRKHYKV 204
           +VV+CLWLLS  GSY SFFT AY+GTI+SIT+PALY+KY +HVDRY GMI ++  +HYK+
Sbjct: 159 KVVVCLWLLSATGSYFSFFTLAYVGTILSITIPALYSKYEEHVDRYCGMIHRKLSQHYKI 218

Query: 205 MDESVFSRLPGSFSKDKD 223
           +DESV +R+P S SK+KD
Sbjct: 219 VDESVINRIPQSLSKEKD 236

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTNLP_ARATH1.4e-6357.07Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1[more]
RTNLB_ARATH5.2e-3137.56Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1[more]
RTNLF_ARATH3.7e-2935.03Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1[more]
RTNLE_ARATH2.4e-2836.55Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1[more]
RTNLC_ARATH2.4e-2833.18Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=2 SV=1[more]
BLAST of Cp4.1LG01g22020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBS2_CUCSA3.3e-9379.46Reticulon-like protein OS=Cucumis sativus GN=Csa_6G014530 PE=4 SV=1[more]
A0A067JFU4_JATCU2.2e-7371.21Reticulon-like protein OS=Jatropha curcas GN=JCGZ_03329 PE=4 SV=1[more]
M5XKE0_PRUPE6.7e-7060.76Reticulon-like protein OS=Prunus persica GN=PRUPE_ppa010739mg PE=4 SV=1[more]
M1BDS1_SOLTU1.1e-6767.68Reticulon-like protein OS=Solanum tuberosum GN=PGSC0003DMG400016636 PE=4 SV=1[more]
A0A061FTL9_THECC1.8e-6765.15Reticulon-like protein OS=Theobroma cacao GN=TCM_045537 PE=4 SV=1[more]
BLAST of Cp4.1LG01g22020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10915.51.3e-5951.13 Reticulon family protein[more]
AT4G11220.12.9e-3237.56 VIRB2-interacting protein 2[more]
AT2G46170.11.4e-2936.55 Reticulon family protein[more]
AT3G10260.38.8e-2933.17 Reticulon family protein[more]
AT4G23630.11.5e-2834.52 VIRB2-interacting protein 1[more]
BLAST of Cp4.1LG01g22020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113825|ref|XP_008456773.1|3.3e-9480.80PREDICTED: reticulon-like protein B16 [Cucumis melo][more]
gi|449441250|ref|XP_004138395.1|4.8e-9379.46PREDICTED: reticulon-like protein B16 [Cucumis sativus][more]
gi|802778465|ref|XP_012091153.1|3.2e-7371.21PREDICTED: reticulon-like protein B16 isoform X1 [Jatropha curcas][more]
gi|719987637|ref|XP_010252078.1|4.3e-7064.82PREDICTED: reticulon-like protein B16 isoform X2 [Nelumbo nucifera][more]
gi|1000962534|ref|XP_002520859.2|9.7e-7066.67PREDICTED: reticulon-like protein B16 isoform X2 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22020.1Cp4.1LG01g22020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 39..193
score: 7.9
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 38..223
score: 30
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 24..222
score: 1.0E
NoneNo IPR availablePANTHERPTHR10994:SF67RETICULON-LIKE PROTEIN B16coord: 24..222
score: 1.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22020Cucsa.326020Cucumber (Gy14) v1cgycpeB0861
Cp4.1LG01g22020CmaCh15G001630Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22020CmaCh04G028660Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22020CmoCh04G029950Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22020CmoCh15G001770Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22020Cla016420Watermelon (97103) v1cpewmB462
Cp4.1LG01g22020Csa6G014530Cucumber (Chinese Long) v2cpecuB460
Cp4.1LG01g22020MELO3C020004Melon (DHL92) v3.5.1cpemeB397
Cp4.1LG01g22020ClCG11G005700Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g22020CSPI06G02120Wild cucumber (PI 183967)cpecpiB461
Cp4.1LG01g22020Lsi03G002670Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g22020MELO3C020004.2Melon (DHL92) v3.6.1cpemedB462
Cp4.1LG01g22020CsaV3_6G002270Cucumber (Chinese Long) v3cpecucB0569
Cp4.1LG01g22020Bhi04G001839Wax gourdcpewgoB0525
Cp4.1LG01g22020CsGy6G002190Cucumber (Gy14) v2cgybcpeB798
Cp4.1LG01g22020Carg02155Silver-seed gourdcarcpeB0374
Cp4.1LG01g22020Carg05942Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g22020Cp4.1LG13g07580Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22020Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g22020Cucurbita pepo (Zucchini)cpecpeB376
Cp4.1LG01g22020Cucumber (Gy14) v1cgycpeB0344
Cp4.1LG01g22020Cucurbita moschata (Rifu)cmocpeB614
Cp4.1LG01g22020Wild cucumber (PI 183967)cpecpiB412
Cp4.1LG01g22020Cucumber (Chinese Long) v2cpecuB413
Cp4.1LG01g22020Bottle gourd (USVL1VR-Ls)cpelsiB328
Cp4.1LG01g22020Watermelon (Charleston Gray)cpewcgB383
Cp4.1LG01g22020Watermelon (97103) v1cpewmB445
Cp4.1LG01g22020Cucumber (Gy14) v2cgybcpeB514
Cp4.1LG01g22020Silver-seed gourdcarcpeB0892
Cp4.1LG01g22020Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g22020Wax gourdcpewgoB0546