CsaV3_6G002270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G002270
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionReticulon-like protein
Locationchr6 : 1556804 .. 1559536 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATACAATTATTATTATTGGATGGGAAAGTTGATGTTTTGTTTGGATAATTGAGAATCCATTAAACATATATATACATCTACATATACATATATATATAGGAAGTCTAACTTGAAAATTAACTAAAACAATAAAATAGGCATAGAACAACTGTAAGGTTTCCATTAAAATAATACACTATCGTGAAATTAAATTAAAAAAGGAAAAGCGACTTTTTCTTCATATTCATTCAGCCTCCCAGAGAAGAAGAAAGAGGGAATGCTTTGAATTTGGAAGTTAAAAAATTCTTCAATTCCGTGAAATCCATTTCCATCTTTCCCTTCCCATTTCTCCATCATTCAAAAACAAAACCCCCAACACTTCTCCACCTTCAATTTTTACTCTAAACCTCCACAATTCTGTCTCACCGGACCCGACCAATTCATAACTGCAATGGTCGATCTTTCCGAAACGGCTGCCGGCAGCGCTGAAGCCGACGGCAAAGACATACCCTGCACCTCATGTGACCGCCAAACTTTACTCCACCAGTCCATGGGCGGCGGCAAAGGTATTTCAATTCTCCTTACATAATTTCGTTGTCTCTCGATCAATTTCGCGTTTCTGAATTAGATTCCTTCGACCCCTTATCGAGAGTTGATGTTGAATCAGTTGGGTGCAATCGGTGATTCTTGAGGGGTTTGATTTTTTATGATACACTGGATGATATGAAGCTTTAATTTAAATGTTTTCTGAAATGGGTTTGCCTGATTCGTCCATGTTCTTTTCATTTTATCTGTTTGTTTCCCTTTTTCGCATTTCAATTACGACTTTGACTGGTTGAAACTTGAAGTTTTTGTTACCTTTTGGCTTTGGGAATCGGATTCTACATTGGCTATTTTCCCAGTTTTATTACAAATTTCTTGCGTGGTTTTCATCTTTCTTCTTCGTGTCTTATAAGGAAAAATTAAAACCAATGATGATATTCCCCTTTCTCGTTTGATAATCTTGACCCTTTGTTCTTTTGCATAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTCTCTATCGGCGTTCTTGTTGTTTCTACAGTATTTTGGCTTCTAATTGAGCACTCCGGATTGCCATTGTTGACAACATGTTCAGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCATTCCGAAACAAGTACGGTTTTAGCTTACTTATGTTTTGATTCACTCTGAAGTTCTTGCATATCATAGTCTTTTACAGATGACTTTTTGCTTATACTACTTTGTTCTTTCCAGCAGATAATTTGTTTTCCTCGTTAGCTTTTCTTCATTTTCTCTCTTTATGCAGGCAACTTCAAACACTACCGCAGCTGGTACTGTCGGAGGAGTTTGTCAACAACGTAGCAGCATCACTTCGGGCAAAAATCAACAACACCTTACTTATGGCTCATGATATCACGGTTGGCAATGATTTCAAACTCTTTTTCAGGGTTGGTATTTTTGAAGCACCATTGAATTATCATACGTGTGATGCATACTGTGATTCCTAGTCCTAATATCCCATATTATTGGAACTTGAATTAAATGGCCAAAACTGATAAGTATTTACTGGGTTTAAGTACTTTTCTCTGAAAATAATAGATTTAAGAATGTTTTACAGGGTTGTTCTGAGGTAGTTAATATTTTACAGGACAGTTTCAAGAATGCATAAACTTAATATTCACTTCAAGAGCATAATGTTGACTTGCTACTTCTTTGTTTTTGGCTGCAATAATATGATTAACCTTGCAAACACCTTTTGCAGATGGTGATCGGATTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTTACCTTTGCATATGTTGGTATGCACGAACATCCTAAAACACTTGCATTCACATTTCTTTAGTTCGTATATGTTCATCTGTTGGTAAATTACGATCCTCAACGACAAGTAAACATTCAGAGAATTTTGTTTGTTTTGTCCATACATCATTTCCTTTCAATGTTTTTTGCTCTCAAGAAATGAATACTGTCTAATGAATGCCCCTTTGTAATCGAGTCTTCTTAACCTAGGATGTTGATTTTTGCCATTTAACTGGATGACAGGAACAATCATCTCAATAACCATCCCTGCTTTGTACAGCAAATACGATAAACACGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATAGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTGGTTTATCCAAAGATAAAGATCAGTGAAAAAACTCTGCCTTTAATTTTCTATAGTTTTACTGAAACCACAGGAAGATTGTAACAATGTTCTATCACAAATGAATGCCTTAACTGGATTCTTGAAGGTTATTGCTTGGCCATGTGTATTTCATACCCCAAGGTTTAATGATGTCAGCCATTATAGATCAGATATCACATATTTTAGTTTTTAATTGCTAGAAGAAAAGATCAGGGTTATGTTCTTTTTCTTTTTTGTTTGGGAGAGGTTATTTAATGATATTTATGAATATTTTCTTTTGAAACTTGTAAGTGGGGAAAGCTTTTGAATCTGGTTGGTCAAGGTCTAATACTGAGATTGAATTTCCTTTTTGTCAAGTATGGACCAGCCCACAAAAGGCCTCATTATTGATTACCCAACAATAGGTTAGTTGGTTCATATTTCATAGTGTGTTTGGACTTAAAAAAAGGATAAACTTTGGG

mRNA sequence

ATGGTCGATCTTTCCGAAACGGCTGCCGGCAGCGCTGAAGCCGACGGCAAAGACATACCCTGCACCTCATGTGACCGCCAAACTTTACTCCACCAGTCCATGGGCGGCGGCAAAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTCTCTATCGGCGTTCTTGTTGTTTCTACAGTATTTTGGCTTCTAATTGAGCACTCCGGATTGCCATTGTTGACAACATGTTCAGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCATTCCGAAACAAGCAACTTCAAACACTACCGCAGCTGGTACTGTCGGAGGAGTTTGTCAACAACGTAGCAGCATCACTTCGGGCAAAAATCAACAACACCTTACTTATGGCTCATGATATCACGGTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGATTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTTACCTTTGCATATGTTGGAACAATCATCTCAATAACCATCCCTGCTTTGTACAGCAAATACGATAAACACGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATAGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTGGTTTATCCAAAGATAAAGATCAGTGA

Coding sequence (CDS)

ATGGTCGATCTTTCCGAAACGGCTGCCGGCAGCGCTGAAGCCGACGGCAAAGACATACCCTGCACCTCATGTGACCGCCAAACTTTACTCCACCAGTCCATGGGCGGCGGCAAAGCGGCTGATATTCTTCTGTGGAAACAGTGGCATGTCTCTATCGGCGTTCTTGTTGTTTCTACAGTATTTTGGCTTCTAATTGAGCACTCCGGATTGCCATTGTTGACAACATGTTCAGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGTGCCAACTTCGCTGCATTCCGAAACAAGCAACTTCAAACACTACCGCAGCTGGTACTGTCGGAGGAGTTTGTCAACAACGTAGCAGCATCACTTCGGGCAAAAATCAACAACACCTTACTTATGGCTCATGATATCACGGTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGATTGTGGCTTTTATCCGTCGTTGGTAGCTACGTTTCTTTCTTTACCTTTGCATATGTTGGAACAATCATCTCAATAACCATCCCTGCTTTGTACAGCAAATACGATAAACACGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATAGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTGGTTTATCCAAAGATAAAGATCAGTGA

Protein sequence

MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ
Homology
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BLAST of CsaV3_6G002270 vs. NCBI nr
Match: XP_004138395.1 (PREDICTED: reticulon-like protein B16 [Cucumis sativus] >KGN45832.1 hypothetical protein Csa_6G014530 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV
Sbjct: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
           LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]
BLAST of CsaV3_6G002270 vs. NCBI nr
Match: XP_008456773.1 (PREDICTED: reticulon-like protein B16 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.8e-115
Identity = 213/224 (95.09%), Postives = 221/224 (98.66%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVDLS+TAAG+ EADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVS G++VVSTV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLLILVVLLFLRAN+AAFRNKQLQTLPQLVLSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
           LRAKINNTLLMAHDIT+GNDFKLFFRMVIGLWLLSVVGSYVSFFTFAY+GTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPG LSKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]
BLAST of CsaV3_6G002270 vs. NCBI nr
Match: XP_022938460.1 (reticulon-like protein B16 [Cucurbita moschata])

HSP 1 Score: 375.9 bits (964), Expect = 9.3e-101
Identity = 193/224 (86.16%), Postives = 207/224 (92.41%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVD  + +AG+ +ADGKDI CTSCDR   LHQSMGGGKAADILLWKQ HVS G++VV+TV
Sbjct: 1   MVDNCD-SAGNVDADGKDIACTSCDRPPSLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLL+LVVLLFLRANFAAFR KQLQTLPQLVLSEEFV+NVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
            RAKINN LL+AHDIT+GNDFKLFFRMVI LWLLSV+GSY+SFFTFAY+GTIISITIPAL
Sbjct: 121 FRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITIPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDR CGMIRQQFRKHYRVMDESVFSRLPG LSKDK Q
Sbjct: 181 YSKYDKHVDRCCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKHQ 223

[Close]
BLAST of CsaV3_6G002270 vs. NCBI nr
Match: XP_023549733.1 (reticulon-like protein B16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.0 bits (959), Expect = 3.5e-100
Identity = 191/224 (85.27%), Postives = 206/224 (91.96%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVD  + +AG+ +ADGKD  CTSCDR   LHQSMGGGKAADILLWKQ HVS G++VV+TV
Sbjct: 1   MVDNCD-SAGNVDADGKDTACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLL+LVVLLFLRANFAAFR KQLQTLPQLVLSEEFV+NVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
            RAKINN LL+AHDIT+GNDFKLFFRMVI LWLLSV+GSY+SFFTFAY+GTIISIT+PAL
Sbjct: 121 FRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDR CGMIRQQFRKHYRVMDESVFSRLPG LSKDK Q
Sbjct: 181 YSKYDKHVDRCCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKHQ 223

[Close]
BLAST of CsaV3_6G002270 vs. NCBI nr
Match: XP_022993764.1 (reticulon-like protein B16 [Cucurbita maxima])

HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99
Identity = 190/224 (84.82%), Postives = 205/224 (91.52%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVD  + +AG+ + DGKDI CTSCDR   LHQSMGGGKAADILLWKQ HVS G++VV+TV
Sbjct: 1   MVDNCD-SAGNVDGDGKDIACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLL+LVVLLFLRANFAAFR KQLQTLPQLVLSEEFV+NVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
            RAKINN LL+AHDIT+GNDFKLFFRMVI LWLLSV+GSY+SFFTFAY+GTIISIT+PAL
Sbjct: 121 FRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDR CGMIRQQFRKHYRVMDE VFSRLPG LSKDK Q
Sbjct: 181 YSKYDKHVDRCCGMIRQQFRKHYRVMDERVFSRLPGSLSKDKHQ 223

[Close]
BLAST of CsaV3_6G002270 vs. TAIR10
Match: AT3G10915.5 (Reticulon family protein)

HSP 1 Score: 232.6 bits (592), Expect = 2.3e-61
Identity = 123/237 (51.90%), Postives = 166/237 (70.04%), Query Frame = 0 

Query: 15  DGKDIPCTSCD-----RQTLLHQSMGGGK----------------------AADILLWKQ 74
           DG++   +S D     RQ  +HQ MGGGK                      AAD+LLW++
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAADLLLWRR 71

Query: 75  WHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQL 134
            H+S+GV+++STV WL+ E SGLP L+  SDVLLI++++ F+ A  +AFRN+QL +LP+L
Sbjct: 72  RHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPEL 131

Query: 135 VLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFFR-MVIGLWLLSVVGSYVSFFTF 194
           VLSEE VN+ AAS R K+N+ L+MAHD+TVGNDF+LFF+ +VI LWLLS +GSY+S  T 
Sbjct: 132 VLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTL 191

Query: 195 AYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKD 224
            Y+GTI+S+TIPALYSKY   VD+ CG I ++   HY+++DE+V SRL   LSKDKD
Sbjct: 192 LYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 248

[Close]
BLAST of CsaV3_6G002270 vs. TAIR10
Match: AT4G11220.1 (VIRB2-interacting protein 2)

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 73/197 (37.06%), Postives = 112/197 (56.85%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI +WK   +S GV   +TV W+L E     LLT    V+++ + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
           +LFL +N   F +K    +P++ + EE +  +A+ LR +IN  +    +I  G D K F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
             + GLW+LS++G   SF T AY+  ++  T+P  Y KY+  VD Y      + +K Y V
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 206 MDESVFSRLPGGLSKDK 223
           +D  VFS++P G  KDK
Sbjct: 252 LDAKVFSKIPRGPLKDK 268

[Close]
BLAST of CsaV3_6G002270 vs. TAIR10
Match: AT3G10260.3 (Reticulon family protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-30
Identity = 66/193 (34.20%), Postives = 109/193 (56.48%), Query Frame = 0 

Query: 25  DRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILV 84
           DRQ  +H  +GGGK+AD+LLW+   +S  VL+ +T  W+L E      L+     LL+ +
Sbjct: 67  DRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGM 126

Query: 85  VLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLF 144
           +  F+ +N + F N+    +P+LVL ++F   V  ++  ++N  LL   D+    + K F
Sbjct: 127 IAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQF 186

Query: 145 FRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYR 204
              VIGLW+ ++VGS  +F T  Y+G + + T+P LY +Y+  VD +   +  +F  HY+
Sbjct: 187 LMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYK 246

Query: 205 VMDESVFSRLPGG 218
            +D    SR+P G
Sbjct: 247 KLDTGFLSRIPSG 259

[Close]
BLAST of CsaV3_6G002270 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 128.3 bits (321), Expect = 6.1e-30
Identity = 70/197 (35.53%), Postives = 111/197 (56.35%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI +WK   +S GVL  +T  W++ E     LLT    V+++++ 
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLA 135

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
           +LFL +N   F NK    +P++ + EE +  +A+ LR +IN       +I  G D K F 
Sbjct: 136 VLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 195

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
             + GLW+LS++G   +F T AY+  ++  T+P  Y KY+  VD        + +K Y V
Sbjct: 196 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 255

Query: 206 MDESVFSRLPGGLSKDK 223
           +DE V S++P G  K+K
Sbjct: 256 LDEKVLSKIPLGPLKNK 272

[Close]
BLAST of CsaV3_6G002270 vs. TAIR10
Match: AT5G41600.1 (VIRB2-interacting protein 3)

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 74/203 (36.45%), Postives = 111/203 (54.68%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI LW+   VS GVL   T  W+L E     LL       +  + 
Sbjct: 55  REKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALA 114

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
            LFL +N   F +K    +P++ + E+ +  + + LR +IN  L +  +I  G D K F 
Sbjct: 115 ALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFI 174

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
            ++ GLW+LS++GS  +F T  Y  T++  TIP LY KY+  VD Y     ++ +K Y V
Sbjct: 175 LVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAV 234

Query: 206 MDE----SVFSRLP-GGLSKDKD 224
           +DE     V S++P G L+K KD
Sbjct: 235 LDEKVLRKVISKIPRGALNKKKD 257

[Close]
BLAST of CsaV3_6G002270 vs. Swiss-Prot
Match: sp|Q8GYH6|RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-65
Identity = 123/214 (57.48%), Postives = 166/214 (77.57%), Query Frame = 0 

Query: 15  DGKDIPCTSCD-----RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSG 74
           DG++   +S D     RQ  +HQ MGGGKAAD+LLW++ H+S+GV+++STV WL+ E SG
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 75  LPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTL 134
           LP L+  SDVLLI++++ F+ A  +AFRN+QL +LP+LVLSEE VN+ AAS R K+N+ L
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLL 131

Query: 135 LMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVD 194
           +MAHD+TVGNDF+LFF++VI LWLLS +GSY+S  T  Y+GTI+S+TIPALYSKY   VD
Sbjct: 132 VMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVD 191

Query: 195 RYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKD 224
           + CG I ++   HY+++DE+V SRL   LSKDKD
Sbjct: 192 KCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 225

[Close]
BLAST of CsaV3_6G002270 vs. Swiss-Prot
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.3e-31
Identity = 73/197 (37.06%), Postives = 112/197 (56.85%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI +WK   +S GV   +TV W+L E     LLT    V+++ + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
           +LFL +N   F +K    +P++ + EE +  +A+ LR +IN  +    +I  G D K F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
             + GLW+LS++G   SF T AY+  ++  T+P  Y KY+  VD Y      + +K Y V
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 206 MDESVFSRLPGGLSKDK 223
           +D  VFS++P G  KDK
Sbjct: 252 LDAKVFSKIPRGPLKDK 268

[Close]
BLAST of CsaV3_6G002270 vs. Swiss-Prot
Match: sp|Q6DBN4|RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-29
Identity = 68/197 (34.52%), Postives = 110/197 (55.84%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGG  AD+ LW+   +S  VL V+T  W+L E      L+    +L+  + 
Sbjct: 55  REKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALA 114

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
            LFL +N  AF NK    +P++ + EE    + ++LR ++N   ++   I +G D K F 
Sbjct: 115 ALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFL 174

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
            +V GLW++SVVG++ +F T  Y+  ++  T+P LY K++  VD       ++ +KHY V
Sbjct: 175 MVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMV 234

Query: 206 MDESVFSRLPGGLSKDK 223
            DE V S+LP    K K
Sbjct: 235 FDEKVLSKLPVASLKAK 251

[Close]
BLAST of CsaV3_6G002270 vs. Swiss-Prot
Match: sp|Q9SS37|RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-29
Identity = 66/193 (34.20%), Postives = 109/193 (56.48%), Query Frame = 0 

Query: 25  DRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILV 84
           DRQ  +H  +GGGK+AD+LLW+   +S  VL+ +T  W+L E      L+     LL+ +
Sbjct: 47  DRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGM 106

Query: 85  VLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLF 144
           +  F+ +N + F N+    +P+LVL ++F   V  ++  ++N  LL   D+    + K F
Sbjct: 107 IAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQF 166

Query: 145 FRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYR 204
              VIGLW+ ++VGS  +F T  Y+G + + T+P LY +Y+  VD +   +  +F  HY+
Sbjct: 167 LMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYK 226

Query: 205 VMDESVFSRLPGG 218
            +D    SR+P G
Sbjct: 227 KLDTGFLSRIPSG 239

[Close]
BLAST of CsaV3_6G002270 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28
Identity = 70/197 (35.53%), Postives = 111/197 (56.35%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI +WK   +S GVL  +T  W++ E     LLT    V+++++ 
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLA 135

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
           +LFL +N   F NK    +P++ + EE +  +A+ LR +IN       +I  G D K F 
Sbjct: 136 VLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 195

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
             + GLW+LS++G   +F T AY+  ++  T+P  Y KY+  VD        + +K Y V
Sbjct: 196 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 255

Query: 206 MDESVFSRLPGGLSKDK 223
           +DE V S++P G  K+K
Sbjct: 256 LDEKVLSKIPLGPLKNK 272

[Close]
BLAST of CsaV3_6G002270 vs. TrEMBL
Match: tr|A0A0A0KBS2|A0A0A0KBS2_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 1.0e-119
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV
Sbjct: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
           LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]
BLAST of CsaV3_6G002270 vs. TrEMBL
Match: tr|A0A1S3C5B5|A0A1S3C5B5_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.2e-115
Identity = 213/224 (95.09%), Postives = 221/224 (98.66%), Query Frame = 0 

Query: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60
           MVDLS+TAAG+ EADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVS G++VVSTV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120
           FWLLIEHSGLPLLTTCSDVLLILVVLLFLRAN+AAFRNKQLQTLPQLVLSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180
           LRAKINNTLLMAHDIT+GNDFKLFFRMVIGLWLLSVVGSYVSFFTFAY+GTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 225
           YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPG LSKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]
BLAST of CsaV3_6G002270 vs. TrEMBL
Match: tr|A0A2I4ER28|A0A2I4ER28_9ROSI (Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC108991898 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 9.9e-75
Identity = 146/228 (64.04%), Postives = 180/228 (78.95%), Query Frame = 0 

Query: 3   DLSETAAGSAEADGKDIPCTS-------CDRQTLLHQSMGGGKAADILLWKQWHVSIGVL 62
           D  +  AG++       PC+S         RQ  +HQ MGGG+AADILLWK+W+VS+G++
Sbjct: 15  DARKPTAGTSSTS----PCSSGGSGYRLFGRQASVHQCMGGGQAADILLWKRWNVSLGII 74

Query: 63  VVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVN 122
            V+TV WLL E SGL  L+ CSDVLLIL+VLLFL AN+A FR++QLQTLP+LVLSEE VN
Sbjct: 75  AVATVAWLLFERSGLSFLSICSDVLLILIVLLFLHANYAVFRDRQLQTLPELVLSEEMVN 134

Query: 123 NVAASLRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISI 182
           N AAS R KINN LLMAHDIT+G DF+LF ++V+ +WLLSVVGS+ SFFT AY+GTII I
Sbjct: 135 NAAASFRVKINNVLLMAHDITLGKDFRLFSKVVVCVWLLSVVGSFFSFFTIAYIGTIIFI 194

Query: 183 TIPALYSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKD 224
           T+PALYSKY++HVDRYCGMI +QF KHY+++DESV SRLP  L+KDKD
Sbjct: 195 TVPALYSKYEEHVDRYCGMIHRQFSKHYKIVDESVISRLPRSLTKDKD 238

[Close]
BLAST of CsaV3_6G002270 vs. TrEMBL
Match: tr|A0A1S3CTY4|A0A1S3CTY4_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103504502 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.9e-73
Identity = 146/153 (95.42%), Postives = 151/153 (98.69%), Query Frame = 0 

Query: 39  AADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRN 98
           AADILLWKQWHVS G++VVSTVFWLLIEHSGLPLLTTC DVLLILVVLLFLRAN+AAFRN
Sbjct: 28  AADILLWKQWHVSFGIIVVSTVFWLLIEHSGLPLLTTCLDVLLILVVLLFLRANYAAFRN 87

Query: 99  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVG 158
           KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDIT+GNDFKLFFRMVIGLWLLSVVG
Sbjct: 88  KQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVG 147

Query: 159 SYVSFFTFAYVGTIISITIPALYSKYDKHVDRY 192
           SYVSFFTFAY+GTIISITIPALYSKYDKHVDRY
Sbjct: 148 SYVSFFTFAYIGTIISITIPALYSKYDKHVDRY 180

[Close]
BLAST of CsaV3_6G002270 vs. TrEMBL
Match: tr|A0A067JFU4|A0A067JFU4_JATCU (Reticulon-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_03329 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.2e-72
Identity = 137/198 (69.19%), Postives = 164/198 (82.83%), Query Frame = 0 

Query: 26  RQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTVFWLLIEHSGLPLLTTCSDVLLILVV 85
           RQ  LHQ MGGGKAAD+LLWK+ HVS GV+VV+TV W + E SGLP LT CSDVLL++ V
Sbjct: 43  RQVSLHQFMGGGKAADVLLWKRRHVSFGVIVVATVAWFIFERSGLPFLTICSDVLLVVTV 102

Query: 86  LLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAASLRAKINNTLLMAHDITVGNDFKLFF 145
           LLF  ANFA  RNKQ Q+LP+LVLSEE V+N AAS R KINN LLMAHDIT+G DF+LFF
Sbjct: 103 LLFFHANFAVIRNKQPQSLPELVLSEEMVHNAAASFRVKINNMLLMAHDITIGKDFRLFF 162

Query: 146 RMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPALYSKYDKHVDRYCGMIRQQFRKHYRV 205
           ++V+ LWLLS +GSY+SFFT AY+GTI+SITIPALYSKY++ VDRYCGMI ++   HY++
Sbjct: 163 KVVVCLWLLSAIGSYLSFFTLAYIGTILSITIPALYSKYEERVDRYCGMIHRKLSHHYKI 222

Query: 206 MDESVFSRLPGGLSKDKD 224
           +DESV SR+P  LSKDKD
Sbjct: 223 VDESVISRIPQSLSKDKD 240

The following BLAST results are available for this feature:
BLAST of CsaV3_6G002270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138395.11.5e-119100.00PREDICTED: reticulon-like protein B16 [Cucumis sativus] >KGN45832.1 hypothetical... [more]
XP_008456773.11.8e-11595.09PREDICTED: reticulon-like protein B16 [Cucumis melo][more]
XP_022938460.19.3e-10186.16reticulon-like protein B16 [Cucurbita moschata][more]
XP_023549733.13.5e-10085.27reticulon-like protein B16 [Cucurbita pepo subsp. pepo][more]
XP_022993764.11.0e-9984.82reticulon-like protein B16 [Cucurbita maxima][more]
BLAST of CsaV3_6G002270 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10915.52.3e-6151.90Reticulon family protein[more]
AT4G11220.12.9e-3237.06VIRB2-interacting protein 2[more]
AT3G10260.32.1e-3034.20Reticulon family protein[more]
AT4G23630.16.1e-3035.53VIRB2-interacting protein 1[more]
AT5G41600.11.8e-2936.45VIRB2-interacting protein 3[more]
BLAST of CsaV3_6G002270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GYH6|RTNLP_ARATH2.5e-6557.48Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1[more]
sp|Q9SUT9|RTNLB_ARATH5.3e-3137.06Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1[more]
sp|Q6DBN4|RTNLF_ARATH3.8e-2934.52Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1[more]
sp|Q9SS37|RTNLH_ARATH3.8e-2934.20Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1[more]
sp|Q9SUR3|RTNLA_ARATH1.1e-2835.53Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1[more]
BLAST of CsaV3_6G002270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBS2|A0A0A0KBS2_CUCSA1.0e-119100.00Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1[more]
tr|A0A1S3C5B5|A0A1S3C5B5_CUCME1.2e-11595.09Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1[more]
tr|A0A2I4ER28|A0A2I4ER28_9ROSI9.9e-7564.04Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC108991898 PE=4 SV=1[more]
tr|A0A1S3CTY4|A0A1S3CTY4_CUCME1.9e-7395.42Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103504502 PE=4 SV=1[more]
tr|A0A067JFU4|A0A067JFU4_JATCU1.2e-7269.19Reticulon-like protein OS=Jatropha curcas OX=180498 GN=JCGZ_03329 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G002270.1CsaV3_6G002270.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 40..194
e-value: 2.4E-43
score: 147.7
IPR003388ReticulonPROSITEPS50845RETICULONcoord: 39..224
score: 29.708
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 10..223
NoneNo IPR availablePANTHERPTHR10994:SF67RETICULON-LIKE PROTEIN B16coord: 10..223

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G002270CSPI06G02120Wild cucumber (PI 183967)cpicucB364
CsaV3_6G002270Cucsa.326020Cucumber (Gy14) v1cgycucB506
CsaV3_6G002270CmaCh15G001630Cucurbita maxima (Rimu)cmacucB0363
CsaV3_6G002270CmaCh04G028660Cucurbita maxima (Rimu)cmacucB0906
CsaV3_6G002270CmoCh15G001770Cucurbita moschata (Rifu)cmocucB0358
CsaV3_6G002270CmoCh04G029950Cucurbita moschata (Rifu)cmocucB0899
CsaV3_6G002270Cp4.1LG13g07580Cucurbita pepo (Zucchini)cpecucB0238
CsaV3_6G002270Cp4.1LG01g22020Cucurbita pepo (Zucchini)cpecucB0569
CsaV3_6G002270CsGy6G002190Cucumber (Gy14) v2cgybcucB298
CsaV3_6G002270Carg05942Silver-seed gourdcarcucB0024
CsaV3_6G002270Carg02155Silver-seed gourdcarcucB0300
CsaV3_6G002270Cla016420Watermelon (97103) v1cucwmB559
CsaV3_6G002270MELO3C020004Melon (DHL92) v3.5.1cucmeB487
CsaV3_6G002270ClCG11G005700Watermelon (Charleston Gray)cucwcgB452
CsaV3_6G002270Lsi03G002670Bottle gourd (USVL1VR-Ls)cuclsiB473
CsaV3_6G002270MELO3C020004.2Melon (DHL92) v3.6.1cucmedB473
CsaV3_6G002270Cla97C11G212630Watermelon (97103) v2cucwmbB441
CsaV3_6G002270Bhi04G001839Wax gourdcucwgoB605
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G002270Cucumber (Chinese Long) v3cuccucB179
CsaV3_6G002270Cucumber (Chinese Long) v3cuccucB203
CsaV3_6G002270Silver-seed gourdcarcucB0711
CsaV3_6G002270Cucumber (Gy14) v2cgybcucB189
CsaV3_6G002270Cucumber (Gy14) v2cgybcucB242
CsaV3_6G002270Cucumber (Gy14) v1cgycucB187
CsaV3_6G002270Cucumber (Gy14) v1cgycucB218
CsaV3_6G002270Cucurbita maxima (Rimu)cmacucB0912
CsaV3_6G002270Cucurbita maxima (Rimu)cmacucB0913
CsaV3_6G002270Cucurbita moschata (Rifu)cmocucB0903
CsaV3_6G002270Cucurbita pepo (Zucchini)cpecucB0574
CsaV3_6G002270Wild cucumber (PI 183967)cpicucB240
CsaV3_6G002270Bottle gourd (USVL1VR-Ls)cuclsiB487
CsaV3_6G002270Melon (DHL92) v3.5.1cucmeB525
CsaV3_6G002270Melon (DHL92) v3.6.1cucmedB513
CsaV3_6G002270Watermelon (Charleston Gray)cucwcgB510
CsaV3_6G002270Watermelon (97103) v1cucwmB511
CsaV3_6G002270Watermelon (97103) v2cucwmbB500