MELO3C019982 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019982
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Heavy metal transport/detoxification superfamily protein
Location	chr3 : 19937992 .. 19939466 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAAGGATAGAGTAGAAATTTTAAAACATACAATAATCCAAACATACAATCATAAAAATCAACCACTTTCAATTCTCTAATGAAACTTCTTTTCCTTTTTCTATTTTTTTTTGTGTCTGTACAAAATGGGTGGAAAAGTCCTAACATGAATGAAAATAATCAAATTTTAAAAGGAATTTATGTCAGGTAGAATAGAAAACAATGTTACTAAAATCTCTTAAAATGACACGTGATGTCATTTTTGTTCAACATAAGTGGGCCGAACCAATATATAAATGGGCCTAGATTCATGTGCCTTTCGTGACAATCCACATTTTCCAACGCAAACTATCAGACAAACACGTCAACCATATAAATAAAAAGAAACATTAGAATCTTTGCAAATCAAGAACAAAATAATATTACATAATCTTATCTTAAAAATTAAGAATTTATGATAGTGTCCGACTTGATATAATAACAATAATAAAAGTAAAAGTGAAAGATATTTGCGGAGAAAGTGGGTCATGTTAACGACAAAAGAGGGGAGTGGATACCGAAAGTGCAATGTGGGGGGACAGACTTCAGACAATGGCCATATCCCCGAAAAAGAAGAAAAGCCCAGCTAAGTAAACATTGATAATATTTCCACACAGCATTCTATTCTTCCTAAATCAAGAATCTCACCTTTTTGAGCTGAAAATTGCATCCAGCAAAATCCACCAAACGAAGAATCCAATTCCTTCTTACTTTTCCTCTATCAACATACATAAATTCTTTACTTAATCAAAACACTTCCTTTTCTTGAAGGATAAGAAAAAACCACTTTATTTCCTCAACACTCTTCAGATTTTTGCACTTGAATCAGGAATTGTGATCGGTCACAGAATGGCTAATGCAAGTATTTCTAAGAGAGAAATTTCTTGGAATTTGATTTCTTTTCTTATGGGTTCTAATGGGTGTTGTTTTTCTGGCCATAGGTGGTGGAATTGAAGGTCTTTTTGCATTGTGACGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGGTTTGTGTTCAATGTCTTCGTCAGAATCTCCTGTGGTTAAGTAATTAATTCGGGTTTTCTTTTCCTTTCTTTTCTTCTCCATTTGCAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACTGGCAATGTCACTAACGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAGTTCCATGGCAAGATGATGAACTGAACAACATTACTAACTAGAGGATTTTGGCGATTATCAAGATTAGAGAAGAGAGAATAAGACTTCCAATTCTGATGTTGTTAGTGATGGATGGATCTACTTTGTTGAGAATTTTGAAACTCTTTTTTTATTTTTTTATCATAATCGAAAGTAAGACTTGGTTCAAATTTACAAGAACTAAACACAGATTCATCAGAGTTAATATGTAACAGATCAAGTTC

mRNA sequence

TAGAAAGGATAGAGTAGAAATTTTAAAACATACAATAATCCAAACATACAATCATAAAAATCAACCACTTTCAATTCTCTAATGAAACTTCTTTTCCTTTTTCTATTTTTTTTTGTGTCTGTACAAAATGGGTGGAAAAGTCCTAACATGAATGAAAATAATCAAATTTTAAAAGGAATTTATGTCAGGTAGAATAGAAAACAATGTTACTAAAATCTCTTAAAATGACACGTGATGTCATTTTTGTTCAACATAAGTGGGCCGAACCAATATATAAATGGGCCTAGATTCATGTGCCTTTCGTGACAATCCACATTTTCCAACGCAAACTATCAGACAAACACGTCAACCATATAAATAAAAAGAAACATTAGAATCTTTGCAAATCAAGAACAAAATAATATTACATAATCTTATCTTAAAAATTAAGAATTTATGATAGTGTCCGACTTGATATAATAACAATAATAAAAGTAAAAGTGAAAGATATTTGCGGAGAAAGTGGGTCATGTTAACGACAAAAGAGGGGAGTGGATACCGAAAGTGCAATGTGGGGGGACAGACTTCAGACAATGGCCATATCCCCGAAAAAGAAGAAAAGCCCAGCTAAGTAAACATTGATAATATTTCCACACAGCATTCTATTCTTCCTAAATCAAGAATCTCACCTTTTTGAGCTGAAAATTGCATCCAGCAAAATCCACCAAACGAAGAATCCAATTCCTTCTTACTTTTCCTCTATCAACATACATAAATTCTTTACTTAATCAAAACACTTCCTTTTCTTGAAGGATAAGAAAAAACCACTTTATTTCCTCAACACTCTTCAGATTTTTGCACTTGAATCAGGAATTGTGATCGGTCACAGAATGGCTAATGTGGTGGAATTGAAGGTCTTTTTGCATTGTGACGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACTGGCAATGTCACTAACGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAGTTCCATGGCAAGATGATGAACTGAACAACATTACTAACTAGAGGATTTTGGCGATTATCAAGATTAGAGAAGAGAGAATAAGACTTCCAATTCTGATGTTGTTAGTGATGGATGGATCTACTTTGTTGAGAATTTTGAAACTCTTTTTTTATTTTTTTATCATAATCGAAAGTAAGACTTGGTTCAAATTTACAAGAACTAAACACAGATTCATCAGAGTTAATATGTAACAGATCAAGTTC

Coding sequence (CDS)

ATGGCTAATGTGGTGGAATTGAAGGTCTTTTTGCATTGTGACGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACTGGCAATGTCACTAACGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAGTTCCATGGCAAGATGATGAACTGAACAACATTACTAACTAG

Protein sequence

MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAVPWQDDELNNITN*

Homology

[Close]

BLAST of MELO3C019982 vs. TrEMBL
Match: A0A0A0K8N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013360 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.0e-33
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKVFLHC+ECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 RKTAVPWQDDELNNI 76
          RKTA+PWQDDELNNI
Sbjct: 61 RKTAIPWQDDELNNI 75

[Close]

BLAST of MELO3C019982 vs. TrEMBL
Match: V7D2X2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G247400g PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-24
Identity = 56/71 (78.87%), Postives = 65/71 (91.55%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVE+KV LHCD+CIKKILKAIKK++DIETYNVD E+NKVIVTGNVT EEVI+VLQK+
Sbjct: 1  MANVVEVKVGLHCDDCIKKILKAIKKMEDIETYNVDTELNKVIVTGNVTTEEVIRVLQKM 60

Query: 61 RKTAVPWQDDE 72
           K A+ W+DDE
Sbjct: 61 GKNAIAWEDDE 71

[Close]

BLAST of MELO3C019982 vs. TrEMBL
Match: A0A087G506_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G047800 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.4e-24
Identity = 56/70 (80.00%), Postives = 65/70 (92.86%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKV LHC+ECIKKILKAIKKI+DIETY+VD ++NKVIVTGNVT+E+VI+VLQK+
Sbjct: 1  MANVVELKVNLHCNECIKKILKAIKKIEDIETYDVDTQLNKVIVTGNVTDEQVIRVLQKV 60

Query: 61 RKTAVPWQDD 71
          RKTAV W  D
Sbjct: 61 RKTAVKWDQD 70

[Close]

BLAST of MELO3C019982 vs. TrEMBL
Match: A0A0D2W1V1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G015800 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.4e-24
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKV LHCDECIKKILKAIKKI+DIETYNVD ++NKVIVTGNVTN+EVI+VLQKI
Sbjct: 1  MANVVELKVGLHCDECIKKILKAIKKIEDIETYNVDTKLNKVIVTGNVTNDEVIRVLQKI 60

Query: 61 RKTAVPWQDD 71
           K A  W+ D
Sbjct: 61 GKQATTWESD 70

[Close]

BLAST of MELO3C019982 vs. TrEMBL
Match: V4T771_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033238mg PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.7e-24
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKV LHCDECI+KILKAIKKI+DIETYNVD E+NKV VTGNVT EEVI+VLQK+
Sbjct: 1  MANVVELKVNLHCDECIRKILKAIKKIEDIETYNVDTELNKVTVTGNVTTEEVIRVLQKV 60

Query: 61 RKTAVPWQDDE 72
          RK A  W +D+
Sbjct: 61 RKIASAWDEDQ 71

[Close]

BLAST of MELO3C019982 vs. TAIR10
Match: AT5G05365.1 (AT5G05365.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 3.2e-26
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKV LHCDECI+KILKAIKKI+DIE Y+VD ++NKV VTGNVT E+VI+VLQK+
Sbjct: 1  MANVVELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKV 60

Query: 61 RKTAVPWQDDELNNITN 78
          RK AV W  D     TN
Sbjct: 61 RKAAVKWDQDNQTLFTN 77

[Close]

BLAST of MELO3C019982 vs. TAIR10
Match: AT3G56891.1 (AT3G56891.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-09
Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 3  NVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRK 62
          ++VEL V + C  C KK+ +AI K+  ++T  +D++  KV VTG V  EEV+K++++  +
Sbjct: 16 SIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGR 75

Query: 63 TAVPW 68
          TA  W
Sbjct: 76 TAEYW 80

[Close]

BLAST of MELO3C019982 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-09
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 1


Query: 7   LKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAVP 66
           L+V +HC+ C +KI K + KI  + T N+D++  KV V GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 67  WQDDELNNITN 78
           W     NNI N
Sbjct: 94  WPTSMENNINN 104

[Close]

BLAST of MELO3C019982 vs. TAIR10
Match: AT3G06130.1 (AT3G06130.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-08
Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 1


Query: 7  LKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAVP 66
          LKV +HCD C +K+ K ++KI+ + T  +D E  KV V+G+V    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAEI 73

Query: 67 WQDDELNNITN 78
          W   + NN  N
Sbjct: 74 WGAPKGNNNPN 84

[Close]

BLAST of MELO3C019982 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 3.9e-08
Identity = 27/61 (44.26%), Postives = 36/61 (59.02%), Query Frame = 1


Query: 7  LKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAVP 66
          LKV +HCD C +K+ K ++KI+ + T  +D E+ KV V+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 67 W 68
          W
Sbjct: 74 W 74

[Close]

BLAST of MELO3C019982 vs. NCBI nr
Match: gi|659113775|ref|XP_008456748.1| (PREDICTED: copper transport protein CCH [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 RKTAVPWQDDELNNITN 78
          RKTAVPWQDDELNNITN
Sbjct: 61 RKTAVPWQDDELNNITN 77

[Close]

BLAST of MELO3C019982 vs. NCBI nr
Match: gi|449441276|ref|XP_004138408.1| (PREDICTED: copper transport protein ATX1 [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33
Identity = 73/75 (97.33%), Postives = 75/75 (100.00%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKVFLHC+ECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 RKTAVPWQDDELNNI 76
          RKTA+PWQDDELNNI
Sbjct: 61 RKTAIPWQDDELNNI 75

[Close]

BLAST of MELO3C019982 vs. NCBI nr
Match: gi|593801110|ref|XP_007163592.1| (hypothetical protein PHAVU_001G247400g [Phaseolus vulgaris])

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 56/71 (78.87%), Postives = 65/71 (91.55%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVE+KV LHCD+CIKKILKAIKK++DIETYNVD E+NKVIVTGNVT EEVI+VLQK+
Sbjct: 1  MANVVEVKVGLHCDDCIKKILKAIKKMEDIETYNVDTELNKVIVTGNVTTEEVIRVLQKM 60

Query: 61 RKTAVPWQDDE 72
           K A+ W+DDE
Sbjct: 61 GKNAIAWEDDE 71

[Close]

BLAST of MELO3C019982 vs. NCBI nr
Match: gi|727494840|ref|XP_010423474.1| (PREDICTED: superoxide dismutase 1 copper chaperone-like [Camelina sativa])

HSP 1 Score: 119.0 bits (297), Expect = 3.7e-24
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKV LHCDECI+KILKAIKKI+DIETY+VD ++NKVIVTGNVT E+VI+VLQK+
Sbjct: 1  MANVVELKVNLHCDECIRKILKAIKKIEDIETYDVDTQLNKVIVTGNVTEEQVIRVLQKV 60

Query: 61 RKTAVPWQDDELNNITN 78
          RK AV W +D     TN
Sbjct: 61 RKAAVKWDEDNQTLFTN 77

[Close]

BLAST of MELO3C019982 vs. NCBI nr
Match: gi|1012253277|ref|XP_015944199.1| (PREDICTED: copper transport protein ATX1 [Arachis duranensis])

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-24
Identity = 59/74 (79.73%), Postives = 62/74 (83.78%), Query Frame = 1


Query: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60
          MANVVELKV LHCDECIKKILKAIKKI+DIETYNVD EMNKV VTGNVT EEVI+VL KI
Sbjct: 1  MANVVELKVGLHCDECIKKILKAIKKIEDIETYNVDTEMNKVTVTGNVTREEVIRVLHKI 60

Query: 61 RKTAVPWQDDELNN 75
           K A  W+DD   N
Sbjct: 61 GKNAAVWEDDTQTN 74

The following BLAST results are available for this feature:

BLAST of MELO3C019982 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8N1_CUCSA	1.0e-33	97.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G013360 PE=4 SV=1	[more]
V7D2X2_PHAVU	2.6e-24	78.87	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G247400g PE=4 SV=1	[more]
A0A087G506_ARAAL	7.4e-24	80.00	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G047800 PE=4 SV=1	[more]
A0A0D2W1V1_GOSRA	7.4e-24	81.43	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G015800 PE=4 SV=1	[more]
V4T771_9ROSI	9.7e-24	78.87	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033238mg PE=4 SV=1	[more]

BLAST of MELO3C019982 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05365.1	3.2e-26	71.43	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	2.1e-09	40.00	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	2.1e-09	40.85	Heavy metal transport/detoxification superfamily protein	[more]
AT3G06130.1	3.9e-08	40.85	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	3.9e-08	44.26	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of MELO3C019982 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113775\|ref\|XP_008456748.1\|	2.1e-35	100.00	PREDICTED: copper transport protein CCH [Cucumis melo]	[more]
gi\|449441276\|ref\|XP_004138408.1\|	1.5e-33	97.33	PREDICTED: copper transport protein ATX1 [Cucumis sativus]	[more]
gi\|593801110\|ref\|XP_007163592.1\|	3.7e-24	78.87	hypothetical protein PHAVU_001G247400g [Phaseolus vulgaris]	[more]
gi\|727494840\|ref\|XP_010423474.1\|	3.7e-24	74.03	PREDICTED: superoxide dismutase 1 copper chaperone-like [Camelina sativa]	[more]
gi\|1012253277\|ref\|XP_015944199.1\|	4.8e-24	79.73	PREDICTED: copper transport protein ATX1 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45788	melon EST collection version 4.0	transcribed_cluster
MU48214	melon EST collection version 4.0	transcribed_cluster
MU48689	melon EST collection version 4.0	transcribed_cluster
MU50976	melon EST collection version 4.0	transcribed_cluster
MU51689	melon EST collection version 4.0	transcribed_cluster
MU62346	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019982T1	MELO3C019982T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU48689	MU48689	transcribed_cluster
MU50976	MU50976	transcribed_cluster
MU48214	MU48214	transcribed_cluster
MU62346	MU62346	transcribed_cluster
MU45788	MU45788	transcribed_cluster
MU51689	MU51689	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 8..63 score: 3.9
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 11..66 score: 9
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 4..68 score: 7.72
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 3..67 score: 2.3
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..73 score: 2.8
None	No IPR available	PANTHER	PTHR22814:SF60	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 1..73 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019982	Csa6G013360	Cucumber (Chinese Long) v2	cumeB478
MELO3C019982	Cla006611	Watermelon (97103) v1	mewmB334
MELO3C019982	ClCG11G005930	Watermelon (Charleston Gray)	mewcgB268
MELO3C019982	Cla97C11G212830	Watermelon (97103) v2	mewmbB280
MELO3C019982	CSPI06G01920	Wild cucumber (PI 183967)	cpimeB476
MELO3C019982	CsGy6G002010	Cucumber (Gy14) v2	cgybmeB418
MELO3C019982	CsaV3_6G002070	Cucumber (Chinese Long) v3	cucmeB487

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019982	Silver-seed gourd	carmeB0021
MELO3C019982	Silver-seed gourd	carmeB0269
MELO3C019982	Wax gourd	mewgoB331
MELO3C019982	Cucurbita maxima (Rimu)	cmameB272
MELO3C019982	Cucurbita maxima (Rimu)	cmameB676
MELO3C019982	Cucurbita moschata (Rifu)	cmomeB263
MELO3C019982	Cucurbita moschata (Rifu)	cmomeB668
MELO3C019982	Cucurbita pepo (Zucchini)	cpemeB165
MELO3C019982	Cucurbita pepo (Zucchini)	cpemeB397
MELO3C019982	Bottle gourd (USVL1VR-Ls)	lsimeB256
MELO3C019982	Cucumber (Gy14) v2	cgybmeB247