MELO3C018778 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018778
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein TIC 20-IV, chloroplastic
Locationchr1 : 2768282 .. 2770477 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTCTTGCATGCAAAGTAACACGGCCCTAACCTCCTCCGCCCTCTCTTTTCCCTTTTCCGCGAAAAACAGGAAAGATGTTTGCGGAGACGACGACCGCGGCCGCCGCAGGAGCATCCGTACGGTATGTTGTCATCTTCGATTGTTTCGTTTGTTTCCTCTTCTTTCCCGTTTAATTGCTATTTCGTTGTACCAAAACTACGAAATGATTACAGTTTTAATTTTGGGCGTTTTATTTCGAGATATTTCGTTTTTTTTTTTTTTTTTTTTGATTGTTGATGCTTCGTTAGTTACTAAAAACAGAAAATGTGTTGGCATCCTATGATTTCGACTCTTTTTTTCTCGTTTTTTTGTTTGAATTTAGAACAAATGTTTGGACTACATATCTGGGGGGAATCTATTTTAGATGATTTGTTGGGAAATCCGAAGGAAAATTATGTCAATCGTTTTAATTTCTCAGTTGTTAAATGAATAACTTCCCAGTGTTGGGTTTTTGGTGTTGTTGATATTACTCTTCATGCTGCAGCGTCTGTTGATCTCCGTGTAAAATTTAATGGAAATTTGGCTACGGTTTGTTGTGTAACTTCTAGTTGATCTTGATTTAGGTACAGTGATGTGTTTTTGAAGAGATGTTTCAAGCCCAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGCTTCTGCTAACTTAGACACAAAACTTGCTTTATCTATTACCAAAGCTAAACAGAAACCTTGTAAGGAACTCAAGTTTTCTTCTTCTAGAGGTACGAAAATTTTCCAACTCTAGCGTTTTAATTACTTCTTATTTTTGTTTGAACATTTGAAGAAATATTGTTTAACTCTTGTGGTTGTTTGTGGGTTTGAGTATCAAGATTTAATGTGTTGGAGCTAGTAAGTTTGTGTTTGATGTGTTGAGTTGTTTAGTCTAGAATTTGAAACATTGGAGAGAGGAAGAGGGAAGATGGAGTTCGCGATAAATGTGCAAACGCCAATAGTAAACATTGTCATAGTCAGTAGATTTGAGTTATTTAACAGTCACCAACTTACTAAATCGGTGGGTGAAACATTCTCTTGTAGTGTGCACAGTATTGTGAAGGTGGATTACAAAAGATATCCTTGTCTGTCTACTCTGTATGTGGGATAATTATTACTCTTGATTGTTGATTAAATGTAATGAGATATGTGTACCTTGGGAAATCGGTTTTCAATCAATCCAAACCCTGGTCCCAGAACTTTGTTATTCCCTGGAAAATGGCGTTGATCATATTGTTCAGCTAGAATTTATATAGTTTATACTTTATCCAAGTTTTGCTATTTGATTCAATGCTATCATATTACTAGAGTTTGAAAAAAACTAATAATGTCAATTTTGAATATTATGATTTCCAGGAATGTTGATATCACATATTTCTTCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGGCTGTTCCATAAACTTCCACTTTGGCCTCCACGAAATCATGCTAGAAAGGGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTCACCCAAAAACCAGAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTAATGGCTGTGCAGATGTCAAGTACAGCATATTACCTCATGCCTTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCTGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCTTTCGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTCGACATCATATGGTATGCTAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAATACTGGGCTGCAGTGGGGTTCATCTACATTTCCAGCTTGTTGGTGTGTATAAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAGACTGCAGTTAGGTATGTTATATGTGTTAGTCTTAGAGATAGAGAATAAAGAACCAGAGAGTGGGCTCTAGATCAAGCCTGATGTTGTTTGTTAAATTTTAACCGTGACTGCCAATTATTTATGGTTATATTTGGTCATCTTACTCTC

mRNA sequence

TATTCTTGCATGCAAAGTAACACGGCCCTAACCTCCTCCGCCCTCTCTTTTCCCTTTTCCGCGAAAAACAGGAAAGATGTTTGCGGAGACGACGACCGCGGCCGCCGCAGGAGCATCCGTACGGTACAGTGATGTGTTTTTGAAGAGATGTTTCAAGCCCAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGCTTCTGCTAACTTAGACACAAAACTTGCTTTATCTATTACCAAAGCTAAACAGAAACCTTGTAAGGAACTCAAGTTTTCTTCTTCTAGAGGAATGTTGATATCACATATTTCTTCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGGCTGTTCCATAAACTTCCACTTTGGCCTCCACGAAATCATGCTAGAAAGGGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTCACCCAAAAACCAGAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTAATGGCTGTGCAGATGTCAAGTACAGCATATTACCTCATGCCTTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCTGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCTTTCGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTCGACATCATATGGTATGCTAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAATACTGGGCTGCAGTGGGGTTCATCTACATTTCCAGCTTGTTGGTGTGTATAAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAGACTGCAGTTAGGTATGTTATATGTGTTAGTCTTAGAGATAGAGAATAAAGAACCAGAGAGTGGGCTCTAGATCAAGCCTGATGTTGTTTGTTAAATTTTAACCGTGACTGCCAATTATTTATGGTTATATTTGGTCATCTTACTCTC

Coding sequence (CDS)

ATGTTTGCGGAGACGACGACCGCGGCCGCCGCAGGAGCATCCGTACGGTACAGTGATGTGTTTTTGAAGAGATGTTTCAAGCCCAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGCTTCTGCTAACTTAGACACAAAACTTGCTTTATCTATTACCAAAGCTAAACAGAAACCTTGTAAGGAACTCAAGTTTTCTTCTTCTAGAGGAATGTTGATATCACATATTTCTTCAGCAGCATCCCCACATCTATCTGGGGAACAAGGCAGGCTGTTCCATAAACTTCCACTTTGGCCTCCACGAAATCATGCTAGAAAGGGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTCACCCAAAAACCAGAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTAATGGCTGTGCAGATGTCAAGTACAGCATATTACCTCATGCCTTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCTGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGAGTCGTGAGGAATAAAGAATTGCCTCATTTCTTTCGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTCGACATCATATGGTATGCTAGCAATTTCATGCCACTCATACATTACAATGGTACATATGCAATGCAATACTGGGCTGCAGTGGGGTTCATCTACATTTCCAGCTTGTTGGTGTGTATAAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAG

Protein sequence

MFAETTTAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQKPCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF*
Homology
[Close]
BLAST of MELO3C018778 vs. Swiss-Prot
Match: TI204_ARATH (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.5e-54
Identity = 100/196 (51.02%), Postives = 134/196 (68.37%), Query Frame = 1 

Query: 96  PLWPP-RNHAR--KGPRAFRDDSYSVKRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYY 155
           PL P  R H R  +  R  +DD + +K    + ++PEWW RTLACVPYL+++Q+S   +Y
Sbjct: 88  PLAPGLRRHRRPIEPARVAKDDFFKIKLPK-IAERPEWWWRTLACVPYLISLQISDVGFY 147

Query: 156 LMPLLEHLD-VDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFFRFHVMMGML 215
           + P LE  D + ++I+++PG++ R P WF M+Y  L Y  VV+NKELPH+ RFH+MMGML
Sbjct: 148 VQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGML 207

Query: 216 LETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFE 275
           LET+L +IW  SNF PLIH+ G + M YW A+GF YI  LL CIR +L G YA+IPF+ +
Sbjct: 208 LETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTD 267

Query: 276 NALIHTFFNIGRYYRP 288
            A IHT FN+G + RP
Sbjct: 268 AASIHTLFNLGGFQRP 282

[Close]
BLAST of MELO3C018778 vs. Swiss-Prot
Match: TI201_ARATH (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-45
Identity = 101/212 (47.64%), Postives = 135/212 (63.68%), Query Frame = 1 

Query: 68  SRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQK 127
           SRG+ +S++S+++S  L+GEQG L   LP+ P R      PRA +D   S  R   +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 128 PEWWLRTLACVPYLMAVQ----MSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPML 187
           P+WW RTLAC+PYLM +      + TAY+L P LE  D + L +   G++ RLP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 188 YFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAV 247
           YF +AY G+VR KE PHFFRFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 248 GFIYISSLLVCIRSSLLGTYAKIPFIFENALI 276
            F Y+ ++L  IR +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]
BLAST of MELO3C018778 vs. Swiss-Prot
Match: TIC20_PEA (Protein TIC 20, chloroplastic OS=Pisum sativum GN=TIC20 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.9e-35
Identity = 80/211 (37.91%), Postives = 119/211 (56.40%), Query Frame = 1 

Query: 69  RGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQKP 128
           RGM  + +S+ +S  LSG Q  L   +P+ P  + +   PRA +D S    R   +T+KP
Sbjct: 42  RGMTFTDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKDSSGF--RFPPMTKKP 101

Query: 129 EWWLRTLACVPYLM----AVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLY 188
            WW RTL+C+PYL+    A   + TAY+L P + +       F +  ++  LP W  + Y
Sbjct: 102 RWWWRTLSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLM--AIGTLPRWSLIAY 161

Query: 189 FNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVG 248
           F +AY  +VR KE PHFFRFHV +GML+E +L +    S +MP   Y G   M +W    
Sbjct: 162 FLIAYLTIVRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTAF 221

Query: 249 FIYISSLLVCIRSSLLGTYAKIPFIFENALI 276
           F+++ + + CIR +L+G YA +PF+ + A I
Sbjct: 222 FVFLFTTIECIRCALVGMYADVPFVCDAAYI 248

[Close]
BLAST of MELO3C018778 vs. TrEMBL
Match: A0A0A0K289_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G045570 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 2.8e-153
Identity = 268/290 (92.41%), Postives = 275/290 (94.83%), Query Frame = 1 

Query: 1   MFAETTTAA--AAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60
           MFAETTT    AAGAS+RYS VFLKRCFKPSLVV PQCRRL SANLDTKLALSI K KQK
Sbjct: 48  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQCRRLGSANLDTKLALSIAKTKQK 107

Query: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120
           PCKELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 108 PCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 167

Query: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 168 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 227

Query: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ
Sbjct: 228 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 287

Query: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 288 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 337

[Close]
BLAST of MELO3C018778 vs. TrEMBL
Match: B9RW66_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1176330 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.4e-67
Identity = 132/283 (46.64%), Postives = 184/283 (65.02%), Query Frame = 1 

Query: 10  AAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLA----LSITKAKQKPCKELKF 69
           AA A+ RY  V +  C K  L   P     ++   ++       LS+++  Q   + L  
Sbjct: 31  AALAAHRYKGVIVDGCTK-ILACKPSSSNSSTVGFESNSPFLPRLSLSRTSQGYNQPLHA 90

Query: 70  SSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVT 129
           SSS+    SH+S AAS  L G+Q  + H +P  P R  + + PRA++ D + +     + 
Sbjct: 91  SSSKEKKFSHLS-AASTSLFGDQNNVLHGIPRLPTRRRSPELPRAYKSDFFRLPFPV-LA 150

Query: 130 QKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYF 189
           +KPEWW RTLAC+PYL+++ MS T  ++ P LEH D   L+++VPG+V RLP +FPM+Y+
Sbjct: 151 EKPEWWWRTLACLPYLISLYMSDTGNFIQPFLEHYDYFGLVYFVPGAVSRLPAYFPMVYY 210

Query: 190 NLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGF 249
            +A  GVV+NK++PHFFRFH+MMGMLLET+L ++WY SNF PLIH+NGTY M YWA VGF
Sbjct: 211 YIALLGVVKNKQVPHFFRFHLMMGMLLETALQVVWYTSNFFPLIHFNGTYGMYYWAGVGF 270

Query: 250 IYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
            YI  LL C+R +L G YA++P I + AL+HT FNIG + RPF
Sbjct: 271 AYILILLQCVRCALAGGYAQMPLISDAALVHTMFNIGGFQRPF 310

[Close]
BLAST of MELO3C018778 vs. TrEMBL
Match: W9RNE4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022185 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.6e-66
Identity = 124/240 (51.67%), Postives = 170/240 (70.83%), Query Frame = 1 

Query: 50  LSITKAKQKPCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPR 109
           +S + + Q+ C+EL   SS+GM ISHIS+++S  LSG+QG L    P    +  +   P+
Sbjct: 49  VSSSWSSQEHCRELHSVSSKGMPISHISASSSVFLSGDQGGLSGGTPRLSNKRRSLMRPQ 108

Query: 110 AFRDDSYSVKRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLD-VDNLIFY 169
           A    S S+     +T+KPEWW RTLA +PYL+++Q+S T +++ PLL H D  ++LI+Y
Sbjct: 109 ACTSSSDSL-HYPALTEKPEWWWRTLASIPYLISLQISDTGFFVQPLLSHYDKFEDLIYY 168

Query: 170 VPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPL 229
           +PG V+R   WFPMLY  + + GVV+ KE PHFFR+HV+M MLLET+L ++W+ SNFMPL
Sbjct: 169 IPGGVKRWSMWFPMLYCYVTFIGVVKKKEWPHFFRYHVIMAMLLETALQVVWHTSNFMPL 228

Query: 230 IHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           IH+NGT+ M YWAAV FIYI   L CIR +L G Y KIPFI E+ALIHT +++G +YRPF
Sbjct: 229 IHFNGTFGMYYWAAVAFIYIFISLECIRCALGGKYVKIPFISESALIHTLYHVGGFYRPF 287

[Close]
BLAST of MELO3C018778 vs. TrEMBL
Match: A0A067L818_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26488 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62
Identity = 134/285 (47.02%), Postives = 178/285 (62.46%), Query Frame = 1 

Query: 9   AAAGASVRYSDVFLKRCFKPSLVVMPQCRRLAS----ANLDTKLALSITKAKQKPCKELK 68
           A A A  RY DV +  C K     +   +RL++    A+      LS++ + Q   + L 
Sbjct: 33  ATAIAVHRYKDVIVDGCTK----ALEARKRLSASPFVAHSSAFPELSMSMSSQGSNQLLH 92

Query: 69  FSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGV 128
             SS+    SH+S   + +  G Q      LP  P R  +   P+A ++D + +     +
Sbjct: 93  VCSSKEKKFSHLSGTLT-NFFGNQDGFSCDLPRLPVRRSSPGLPKACKNDFFRLPFPV-L 152

Query: 129 TQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLD-VDNLIFYVPGSVQRLPWWFPML 188
             KPEWW RTLACVPYL+ +Q+S T Y+L P LE+ D + +LI+Y+PG++ RLP WF M+
Sbjct: 153 ADKPEWWWRTLACVPYLIGLQISDTGYFLHPFLEYYDYLGDLIYYIPGAISRLPPWFTMV 212

Query: 189 YFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAV 248
           Y  +AY G+V+NK+ PHFFRFH+MMGMLLET+L +IWY SNF PLIHYNG Y M YWA V
Sbjct: 213 YCYVAYIGIVKNKDWPHFFRFHLMMGMLLETALQVIWYTSNFFPLIHYNGRYGMYYWAGV 272

Query: 249 GFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           GF YI  LL C+R +L G YA IP I + ALIHT FNIGR+ RPF
Sbjct: 273 GFAYILVLLQCVRCALAGGYAGIPGISDAALIHTLFNIGRFQRPF 311

[Close]
BLAST of MELO3C018778 vs. TrEMBL
Match: A0A0D2VYX5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G131600 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.8e-62
Identity = 115/225 (51.11%), Postives = 156/225 (69.33%), Query Frame = 1 

Query: 65  FSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGV 124
           F SS G     +S+ +SP L  +   L+    + P R+ +   PRA++DD +   R   +
Sbjct: 62  FLSSTGARCKALSALSSPFLGEDDDDLWRTTNVLPLRSRSLSLPRAYKDDVFKF-RYPVI 121

Query: 125 TQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDV-DNLIFYVPGSVQRLPWWFPML 184
           T+KPEWWLRTLACVPYL+A+Q+S   Y+L P LEH ++ +NLI++VPG+++RLP WF M+
Sbjct: 122 TEKPEWWLRTLACVPYLLALQISDAGYFLHPFLEHCEMFENLIYFVPGAIKRLPPWFSMI 181

Query: 185 YFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAV 244
           Y    Y G+V+NK+  H+ RFH+MMGMLLET+L +IWY SNF+PLIHYNG + M YWA +
Sbjct: 182 YCYFGYIGIVKNKDWSHYIRFHLMMGMLLETALQLIWYTSNFLPLIHYNGCFGMHYWAGI 241

Query: 245 GFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           GF YI  L  C+R +L G YA IPFI + A IHT FN+G + RPF
Sbjct: 242 GFGYILVLFECVRCALGGRYAHIPFISDAAYIHTVFNVGGFQRPF 285

[Close]
BLAST of MELO3C018778 vs. TAIR10
Match: AT4G03320.1 (AT4G03320.1 translocon at the inner envelope membrane of chloroplasts 20-IV)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-55
Identity = 100/196 (51.02%), Postives = 134/196 (68.37%), Query Frame = 1 

Query: 96  PLWPP-RNHAR--KGPRAFRDDSYSVKRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYY 155
           PL P  R H R  +  R  +DD + +K    + ++PEWW RTLACVPYL+++Q+S   +Y
Sbjct: 88  PLAPGLRRHRRPIEPARVAKDDFFKIKLPK-IAERPEWWWRTLACVPYLISLQISDVGFY 147

Query: 156 LMPLLEHLD-VDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFFRFHVMMGML 215
           + P LE  D + ++I+++PG++ R P WF M+Y  L Y  VV+NKELPH+ RFH+MMGML
Sbjct: 148 VQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGML 207

Query: 216 LETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFE 275
           LET+L +IW  SNF PLIH+ G + M YW A+GF YI  LL CIR +L G YA+IPF+ +
Sbjct: 208 LETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTD 267

Query: 276 NALIHTFFNIGRYYRP 288
            A IHT FN+G + RP
Sbjct: 268 AASIHTLFNLGGFQRP 282

[Close]
BLAST of MELO3C018778 vs. TAIR10
Match: AT1G04940.1 (AT1G04940.1 translocon at the inner envelope membrane of chloroplasts 20)

HSP 1 Score: 184.9 bits (468), Expect = 7.1e-47
Identity = 101/212 (47.64%), Postives = 135/212 (63.68%), Query Frame = 1 

Query: 68  SRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQK 127
           SRG+ +S++S+++S  L+GEQG L   LP+ P R      PRA +D   S  R   +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 128 PEWWLRTLACVPYLMAVQ----MSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPML 187
           P+WW RTLAC+PYLM +      + TAY+L P LE  D + L +   G++ RLP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 188 YFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAV 247
           YF +AY G+VR KE PHFFRFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 248 GFIYISSLLVCIRSSLLGTYAKIPFIFENALI 276
            F Y+ ++L  IR +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]
BLAST of MELO3C018778 vs. TAIR10
Match: AT1G04945.3 (AT1G04945.3 HIT-type Zinc finger family protein)

HSP 1 Score: 169.9 bits (429), Expect = 2.4e-42
Identity = 93/196 (47.45%), Postives = 125/196 (63.78%), Query Frame = 1 

Query: 68  SRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQK 127
           SRG+ +S++S+++S  L+GEQG L   LP+ P R      PRA +D   S  R   +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 128 PEWWLRTLACVPYLMAVQ----MSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPML 187
           P+WW RTLAC+PYLM +      + TAY+L P LE  D + L +   G++ RLP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 188 YFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAV 247
           YF +AY G+VR KE PHFFRFHV+MGMLLE +L +I   S +MPL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 248 GFIYISSLLVCIRSSL 260
            F Y+ ++L  IR +L
Sbjct: 241 AFAYLFTVLESIRCAL 253

[Close]
BLAST of MELO3C018778 vs. NCBI nr
Match: gi|659110705|ref|XP_008455368.1| (PREDICTED: protein TIC 20-IV, chloroplastic [Cucumis melo])

HSP 1 Score: 595.5 bits (1534), Expect = 4.9e-167
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1 

Query: 1   MFAETTTAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQKPC 60
           MFAETTTAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQKPC
Sbjct: 1   MFAETTTAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQKPC 60

Query: 61  KELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKR 120
           KELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKR
Sbjct: 61  KELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKR 120

Query: 121 QSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWF 180
           QSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWF
Sbjct: 121 QSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWF 180

Query: 181 PMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW 240
           PMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW
Sbjct: 181 PMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYW 240

Query: 241 AAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           AAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 241 AAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 288

[Close]
BLAST of MELO3C018778 vs. NCBI nr
Match: gi|700188335|gb|KGN43568.1| (hypothetical protein Csa_7G045570 [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 4.1e-153
Identity = 268/290 (92.41%), Postives = 275/290 (94.83%), Query Frame = 1 

Query: 1   MFAETTTAA--AAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60
           MFAETTT    AAGAS+RYS VFLKRCFKPSLVV PQCRRL SANLDTKLALSI K KQK
Sbjct: 48  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQCRRLGSANLDTKLALSIAKTKQK 107

Query: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120
           PCKELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 108 PCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 167

Query: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 168 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 227

Query: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ
Sbjct: 228 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 287

Query: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 288 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 337

[Close]
BLAST of MELO3C018778 vs. NCBI nr
Match: gi|778723961|ref|XP_004144571.2| (PREDICTED: protein TIC 20-IV, chloroplastic [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 4.1e-153
Identity = 268/290 (92.41%), Postives = 275/290 (94.83%), Query Frame = 1 

Query: 1   MFAETTTAA--AAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60
           MFAETTT    AAGAS+RYS VFLKRCFKPSLVV PQCRRL SANLDTKLALSI K KQK
Sbjct: 23  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQCRRLGSANLDTKLALSIAKTKQK 82

Query: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120
           PCKELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 83  PCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 142

Query: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 143 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 202

Query: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ
Sbjct: 203 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 262

Query: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 263 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 312

[Close]
BLAST of MELO3C018778 vs. NCBI nr
Match: gi|255553889|ref|XP_002517985.1| (PREDICTED: protein TIC 20-IV, chloroplastic [Ricinus communis])

HSP 1 Score: 264.6 bits (675), Expect = 2.0e-67
Identity = 132/283 (46.64%), Postives = 184/283 (65.02%), Query Frame = 1 

Query: 10  AAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLA----LSITKAKQKPCKELKF 69
           AA A+ RY  V +  C K  L   P     ++   ++       LS+++  Q   + L  
Sbjct: 31  AALAAHRYKGVIVDGCTK-ILACKPSSSNSSTVGFESNSPFLPRLSLSRTSQGYNQPLHA 90

Query: 70  SSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVT 129
           SSS+    SH+S AAS  L G+Q  + H +P  P R  + + PRA++ D + +     + 
Sbjct: 91  SSSKEKKFSHLS-AASTSLFGDQNNVLHGIPRLPTRRRSPELPRAYKSDFFRLPFPV-LA 150

Query: 130 QKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYF 189
           +KPEWW RTLAC+PYL+++ MS T  ++ P LEH D   L+++VPG+V RLP +FPM+Y+
Sbjct: 151 EKPEWWWRTLACLPYLISLYMSDTGNFIQPFLEHYDYFGLVYFVPGAVSRLPAYFPMVYY 210

Query: 190 NLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGF 249
            +A  GVV+NK++PHFFRFH+MMGMLLET+L ++WY SNF PLIH+NGTY M YWA VGF
Sbjct: 211 YIALLGVVKNKQVPHFFRFHLMMGMLLETALQVVWYTSNFFPLIHFNGTYGMYYWAGVGF 270

Query: 250 IYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
            YI  LL C+R +L G YA++P I + AL+HT FNIG + RPF
Sbjct: 271 AYILILLQCVRCALAGGYAQMPLISDAALVHTMFNIGGFQRPF 310

[Close]
BLAST of MELO3C018778 vs. NCBI nr
Match: gi|694332973|ref|XP_009357096.1| (PREDICTED: protein TIC 20-IV, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66
Identity = 128/280 (45.71%), Postives = 186/280 (66.43%), Query Frame = 1 

Query: 10  AAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQKPCKELKFSSSR 69
           A+ A+ RY DV LKR  KP+ VV   CR    +N++    LS +++ Q+P   L   + +
Sbjct: 13  ASPAASRYKDVNLKRQNKPNQVV---CR----SNINAVPILSSSRSLQQPNHNLHSWAPK 72

Query: 70  GMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSVKRQSGVTQKPE 129
           G+     S  +S  L G QG   H + + P +  +    +A + +S SV     + +KPE
Sbjct: 73  GLSNLQFSFTSSRLLRGNQGDQSHNISMLPRQRKSSTLTQAKKSNSISVPFPK-IKEKPE 132

Query: 130 WWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDV-DNLIFYVPGSVQRLPWWFPMLYFNLA 189
           WW RTLAC+PYL+A+QMS T +Y+ P +EH ++  +L++YVPG+++RLP+WF M+YF LA
Sbjct: 133 WWWRTLACLPYLIALQMSDTGFYIQPFIEHYELFGDLVYYVPGAIKRLPYWFTMIYFFLA 192

Query: 190 YFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVGFIYI 249
           YFGVV+ KE PHFFR+HV+M MLLET L ++WY+SNF PLIH+NGT+ ++YWA V  +Y+
Sbjct: 193 YFGVVKKKEWPHFFRYHVIMAMLLETMLQVVWYSSNFFPLIHFNGTFGIEYWAVVALVYV 252

Query: 250 SSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 289
           S +L CIR +L G Y K+PF    AL+HT F +  Y++PF
Sbjct: 253 SVMLECIRCALAGKYVKLPFFSTPALVHTLFQVEGYHKPF 284

The following BLAST results are available for this feature:
BLAST of MELO3C018778 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TI204_ARATH2.5e-5451.02Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana GN=TIC20-IV PE=2 SV=1[more]
TI201_ARATH1.3e-4547.64Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana GN=TIC20-I PE=1 SV=1[more]
TIC20_PEA5.9e-3537.91Protein TIC 20, chloroplastic OS=Pisum sativum GN=TIC20 PE=1 SV=1[more]
BLAST of MELO3C018778 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K289_CUCSA2.8e-15392.41Uncharacterized protein OS=Cucumis sativus GN=Csa_7G045570 PE=4 SV=1[more]
B9RW66_RICCO1.4e-6746.64Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1176330 PE=4 SV=1[more]
W9RNE4_9ROSA7.6e-6651.67Uncharacterized protein OS=Morus notabilis GN=L484_022185 PE=4 SV=1[more]
A0A067L818_JATCU1.4e-6247.02Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26488 PE=4 SV=1[more]
A0A0D2VYX5_GOSRA1.8e-6251.11Uncharacterized protein OS=Gossypium raimondii GN=B456_012G131600 PE=4 SV=1[more]
BLAST of MELO3C018778 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03320.11.4e-5551.02 translocon at the inner envelope membrane of chloroplasts 20-IV[more]
AT1G04940.17.1e-4747.64 translocon at the inner envelope membrane of chloroplasts 20[more]
AT1G04945.32.4e-4247.45 HIT-type Zinc finger family protein[more]
BLAST of MELO3C018778 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110705|ref|XP_008455368.1|4.9e-167100.00PREDICTED: protein TIC 20-IV, chloroplastic [Cucumis melo][more]
gi|700188335|gb|KGN43568.1|4.1e-15392.41hypothetical protein Csa_7G045570 [Cucumis sativus][more]
gi|778723961|ref|XP_004144571.2|4.1e-15392.41PREDICTED: protein TIC 20-IV, chloroplastic [Cucumis sativus][more]
gi|255553889|ref|XP_002517985.1|2.0e-6746.64PREDICTED: protein TIC 20-IV, chloroplastic [Ricinus communis][more]
gi|694332973|ref|XP_009357096.1|1.3e-6645.71PREDICTED: protein TIC 20-IV, chloroplastic-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045037 protein import into chloroplast stroma
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46970melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018778T1MELO3C018778T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46970MU46970transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 104..273
score: 3.2
NoneNo IPR availablePANTHERPTHR33510FAMILY NOT NAMEDcoord: 66..281
score: 1.6
NoneNo IPR availablePANTHERPTHR33510:SF2PROTEIN TIC 20-IV, CHLOROPLASTICcoord: 66..281
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018778Csa7G045570Cucumber (Chinese Long) v2cumeB530
MELO3C018778Cla007712Watermelon (97103) v1mewmB245
MELO3C018778ClCG02G001440Watermelon (Charleston Gray)mewcgB195
MELO3C018778Cla97C02G027890Watermelon (97103) v2mewmbB178
MELO3C018778Bhi05G001558Wax gourdmewgoB221
MELO3C018778CSPI07G04150Wild cucumber (PI 183967)cpimeB538
MELO3C018778Cucsa.148110Cucumber (Gy14) v1cgymeB248
MELO3C018778Lsi11G015010Bottle gourd (USVL1VR-Ls)lsimeB095
MELO3C018778CsGy7G003790Cucumber (Gy14) v2cgybmeB468
MELO3C018778CsaV3_7G004010Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018778Cucurbita pepo (Zucchini)cpemeB223
MELO3C018778Cucurbita pepo (Zucchini)cpemeB273
MELO3C018778Cucurbita pepo (Zucchini)cpemeB481
MELO3C018778Cucurbita pepo (Zucchini)cpemeB609
MELO3C018778Cucurbita pepo (Zucchini)cpemeB683
MELO3C018778Bottle gourd (USVL1VR-Ls)lsimeB130
MELO3C018778Bottle gourd (USVL1VR-Ls)lsimeB204
MELO3C018778Silver-seed gourdcarmeB0033
MELO3C018778Silver-seed gourdcarmeB0640
MELO3C018778Silver-seed gourdcarmeB0715
MELO3C018778Silver-seed gourdcarmeB0865
MELO3C018778Cucumber (Chinese Long) v3cucmeB039
MELO3C018778Cucumber (Chinese Long) v3cucmeB473
MELO3C018778Watermelon (97103) v2mewmbB172
MELO3C018778Watermelon (97103) v2mewmbB191
MELO3C018778Wax gourdmewgoB232
MELO3C018778Wax gourdmewgoB236
MELO3C018778Melon (DHL92) v3.5.1memeB064
MELO3C018778Melon (DHL92) v3.5.1memeB100
MELO3C018778Cucumber (Gy14) v1cgymeB021
MELO3C018778Cucumber (Gy14) v1cgymeB199
MELO3C018778Cucurbita maxima (Rimu)cmameB099
MELO3C018778Cucurbita maxima (Rimu)cmameB205
MELO3C018778Cucurbita maxima (Rimu)cmameB461
MELO3C018778Cucurbita maxima (Rimu)cmameB562
MELO3C018778Cucurbita moschata (Rifu)cmomeB090
MELO3C018778Cucurbita moschata (Rifu)cmomeB190
MELO3C018778Cucurbita moschata (Rifu)cmomeB452
MELO3C018778Cucurbita moschata (Rifu)cmomeB504
MELO3C018778Cucurbita moschata (Rifu)cmomeB553
MELO3C018778Wild cucumber (PI 183967)cpimeB040
MELO3C018778Wild cucumber (PI 183967)cpimeB462
MELO3C018778Cucumber (Chinese Long) v2cumeB040
MELO3C018778Watermelon (Charleston Gray)mewcgB208
MELO3C018778Watermelon (Charleston Gray)mewcgB194
MELO3C018778Watermelon (97103) v1mewmB225
MELO3C018778Watermelon (97103) v1mewmB238