CsGy7G003790 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G003790
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein TIC 20-IV, chloroplastic isoform X1
Location	Chr7 : 2885031 .. 2887268 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATTTCTAGAAAGAGGTCGATAAAATATGAAATTAGAGATGTAGCCTATTCTTGCATGCAAAGTAACACCGCCCTAACCTCCTCCGCCTCACTTTTCCCTTTTGCGCGAAAAACAGGAAAGATGTTTGCGGAGACCACGACGCCGACGCCCACGGCGGCAGGAGCCTCCTTACGGTATGTTGTCATCTTTGATTCTGTTTTTTAATTTCCTCTTCTTTCCCGTTTAATTTCTATTTCGTTGTACCAAAACTAGGAAATAATTACAGTTTTCATTTTGGGCGTTTCATTTCGAGATATTTCGTTTTTTTTTTTTTTTTGTTTGTTATTTATTGATTGTTGACGCTTCGTTAGTTACTAATAACAGAGAATGTATTGGCATCCTATGATTTTGACTCTTTTCTTCTCGGTTTTTTGTTTGAATTTAGAACAAATGTTTGGACTATATATCTGGGGGGGAATCTAGTTTAGATGATTATGTCAATTATTTTAATTTTTCAGTTGTTAAATGAATAACTTCAAGTATTGGGTTACTCTTCATGCTGCAGCCTCTGTTGGTTTCCATGTAAATTTTAATAGAAATTTGGCTATGGTTTTGTTGCGTAACTTCTAGTTGATCTTGATTCAGGTACAGTGGTGTGTTTTTGAAAAGATGTTTCAAGCCTAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTAGACACGAAGCTTGCTTTATCTATTGCCAAAACTAAACAGAAACCTTCTAAGGAATTGAAGTTTTCTTCTTCTAGAGGTACGATTATTTTTCAACTCTAGTGTTTTAATTACTTTTTATTTTCGTAATAGATTTTGTTAACCTTTGTGGTTGTTTGTGGGTTTGAGTATCAAGAGTTAATAGGTTGGAGATAGTGAGTTTGTGTTTGATGTGCTGAGTTATTTAGTCTAGAATTTGAAACATTGGAGAGAGGTAGAGGGAAAGAGGGAGTTCACTGTAAACGTGCAAACTTCAATACTGAGCATTGGTATAGTTAGTAGATTTGAGTTATTTAACAGTACGTCACCAACTTATGAAACCGGTGGACAAAACGTTCTCTTGTAGTGTGCACAATATTGTGAAGGTGGATTACAAAAGATATCCTTCTCTGTCTACCCTATATGTAGGATAATTATTATACTCTTGATTGTTGATTAAATGTAATGGGATAAGTCTACCTTGGGAAATCGGTTTTCGATCAACGCAAAACCTGGTCTGAGAACTTTGTTATTCCCTGGAAAACATCGTTCATTCATATTGTTCAGCTAGGATTTATATTGTTTATACTTTATCCAAGTTTCGCTATTTGATTCAATGCTATCATATTACTAAAGTTGGAGAAAAACTAATAATGTCAATTTTGAATATTATGATTTCCAGGAATGTCGATATCACATATTTCTGCAGCAGCATCCCCATATCTATCTGGGGAACAAGGCAGTCTATTCCATAAACTTCCACTTTTGCCTCCACGAAAATATGCTAAAAAGGGTCCTCGGGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTTACCCAAAAACCAAAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCATGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCCGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGTGTCGTGAGGAATAAAGAATTGCCTCATTTCGTTCGGTTCCATGTTATGATGGGGATGTTATTAGAAACCTCACTTGACATCATATGGTATGCTAGCAATTTCTTGCCACTCATACATTACAATGGCACATACGCAATGCAATATTGGGCTGCAGTGGCGTTCATCTACATTTCCAGCTTGTTAGTGTGTATTAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAGAGTGCAGCTAGGTATGTTTATATGAGTCAGAGTCTTATAGAGTCTTATAGTTAGAGAATAAAGAACCAGAGAGTGTGCTCTTGATCGAGCCTGATGTTGTTTGTTAATTTTTGACCGTGACTGCCAATTATTTATGGTTATATTTGGTATCTTACTCTCATCTTTTCCCC

mRNA sequence

GATATTTCTAGAAAGAGGTCGATAAAATATGAAATTAGAGATGTAGCCTATTCTTGCATGCAAAGTAACACCGCCCTAACCTCCTCCGCCTCACTTTTCCCTTTTGCGCGAAAAACAGGAAAGATGTTTGCGGAGACCACGACGCCGACGCCCACGGCGGCAGGAGCCTCCTTACGGTACAGTGGTGTGTTTTTGAAAAGATGTTTCAAGCCTAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTAGACACGAAGCTTGCTTTATCTATTGCCAAAACTAAACAGAAACCTTCTAAGGAATTGAAGTTTTCTTCTTCTAGAGGAATGTCGATATCACATATTTCTGCAGCAGCATCCCCATATCTATCTGGGGAACAAGGCAGTCTATTCCATAAACTTCCACTTTTGCCTCCACGAAAATATGCTAAAAAGGGTCCTCGGGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTTACCCAAAAACCAAAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCATGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCCGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGTGTCGTGAGGAATAAAGAATTGCCTCATTTCGTTCGGTTCCATGTTATGATGGGGATGTTATTAGAAACCTCACTTGACATCATATGGTATGCTAGCAATTTCTTGCCACTCATACATTACAATGGCACATACGCAATGCAATATTGGGCTGCAGTGGCGTTCATCTACATTTCCAGCTTGTTAGTGTGTATTAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAGAGTGCAGCTAGGTATGTTTATATGAGTCAGAGTCTTATAGAGTCTTATAGTTAGAGAATAAAGAACCAGAGAGTGTGCTCTTGATCGAGCCTGATGTTGTTTGTTAATTTTTGACCGTGACTGCCAATTATTTATGGTTATATTTGGTATCTTACTCTCATCTTTTCCCC

Coding sequence (CDS)

ATGCAAAGTAACACCGCCCTAACCTCCTCCGCCTCACTTTTCCCTTTTGCGCGAAAAACAGGAAAGATGTTTGCGGAGACCACGACGCCGACGCCCACGGCGGCAGGAGCCTCCTTACGGTACAGTGGTGTGTTTTTGAAAAGATGTTTCAAGCCTAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTAGACACGAAGCTTGCTTTATCTATTGCCAAAACTAAACAGAAACCTTCTAAGGAATTGAAGTTTTCTTCTTCTAGAGGAATGTCGATATCACATATTTCTGCAGCAGCATCCCCATATCTATCTGGGGAACAAGGCAGTCTATTCCATAAACTTCCACTTTTGCCTCCACGAAAATATGCTAAAAAGGGTCCTCGGGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTTACCCAAAAACCAAAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCATGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCCGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGTGTCGTGAGGAATAAAGAATTGCCTCATTTCGTTCGGTTCCATGTTATGATGGGGATGTTATTAGAAACCTCACTTGACATCATATGGTATGCTAGCAATTTCTTGCCACTCATACATTACAATGGCACATACGCAATGCAATATTGGGCTGCAGTGGCGTTCATCTACATTTCCAGCTTGTTAGTGTGTATTAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAG

Protein sequence

MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF

Homology

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BLAST of CsGy7G003790 vs. NCBI nr
Match: KGN43568.1 (hypothetical protein Csa_7G045570 [Cucumis sativus])

HSP 1 Score: 618.2 bits (1593), Expect = 1.5e-173
Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQC 60
           MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVV PQC
Sbjct: 26  MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQC 85

Query: 61  RRLGSANLDTKLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP 120
           RRLGSANLDTKLALSIAKTKQKP KELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP
Sbjct: 86  RRLGSANLDTKLALSIAKTKQKPCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP 145

Query: 121 LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL 180
           LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL
Sbjct: 146 LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL 205

Query: 181 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 240
           LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL
Sbjct: 206 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 265

Query: 241 DIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 300
           DIIWYASNF+PLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH
Sbjct: 266 DIIWYASNFMPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 325

Query: 301 TFFNIGRYYRPF 313
           TFFNIGRYYRPF
Sbjct: 326 TFFNIGRYYRPF 337

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BLAST of CsGy7G003790 vs. NCBI nr
Match: XP_004144571.2 (PREDICTED: protein TIC 20-IV, chloroplastic [Cucumis sativus])

HSP 1 Score: 618.2 bits (1593), Expect = 1.5e-173
Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQC 60
           MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVV PQC
Sbjct: 1   MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQC 60

Query: 61  RRLGSANLDTKLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP 120
           RRLGSANLDTKLALSIAKTKQKP KELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP
Sbjct: 61  RRLGSANLDTKLALSIAKTKQKPCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP 120

Query: 121 LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL 180
           LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL
Sbjct: 121 LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL 180

Query: 181 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 240
           LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL
Sbjct: 181 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 240

Query: 241 DIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 300
           DIIWYASNF+PLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH
Sbjct: 241 DIIWYASNFMPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 300

Query: 301 TFFNIGRYYRPF 313
           TFFNIGRYYRPF
Sbjct: 301 TFFNIGRYYRPF 312

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BLAST of CsGy7G003790 vs. NCBI nr
Match: XP_008455368.1 (PREDICTED: protein TIC 20-IV, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 536.6 bits (1381), Expect = 5.7e-149
Identity = 267/290 (92.07%), Postives = 275/290 (94.83%), Query Frame = 0


Query: 23  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQK 82
           MFAETT  T  AAGAS+RYS VFLKRCFKPSLVVMPQCRRL SANLDTKLALSI K KQK
Sbjct: 1   MFAETT--TAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60

Query: 83  PSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 142
           P KELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120

Query: 143 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 202
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180

Query: 203 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQ 262
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNF+PLIHYNGTYAMQ
Sbjct: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240

Query: 263 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 288

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BLAST of CsGy7G003790 vs. NCBI nr
Match: XP_016901684.1 (PREDICTED: protein TIC 20-IV, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 526.9 bits (1356), Expect = 4.5e-146
Identity = 265/290 (91.38%), Postives = 273/290 (94.14%), Query Frame = 0


Query: 23  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQK 82
           MFAETT  T  AAGAS+R   VFLKRCFKPSLVVMPQCRRL SANLDTKLALSI K KQK
Sbjct: 1   MFAETT--TAAAAGASVR--DVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60

Query: 83  PSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 142
           P KELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120

Query: 143 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 202
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180

Query: 203 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQ 262
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNF+PLIHYNGTYAMQ
Sbjct: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240

Query: 263 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 286

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BLAST of CsGy7G003790 vs. NCBI nr
Match: XP_023554543.1 (protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.0 bits (1216), Expect = 7.8e-130
Identity = 246/335 (73.43%), Postives = 271/335 (80.90%), Query Frame = 0


Query: 1   MQSNTALTSSASLFPFARKT------GKMFA---------ETTTPTP--------TAAGA 60
           M S TAL S+ASLF F  +T      GKMFA            +P P         A  +
Sbjct: 1   MPSITAL-STASLFLFCAETGKIGKIGKMFAVAPSSGARLRCNSPNPLLAMPATTMATAS 60

Query: 61  SLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQKPSKELKFSSSRGMSI 120
           S+RY  V LK CFKPS VV+PQCRRL  ANL T L LSI+ TKQ+P KELKFSSSRGM +
Sbjct: 61  SVRYRDVVLKGCFKPSQVVVPQCRRLDCANLGTNLVLSISNTKQEPCKELKFSSSRGMLM 120

Query: 121 SHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLR 180
           SH+SAAASP L GEQGSLFHKLPLLPPRKYA+K P+AFRDDSY VKR S VT+KP+WW R
Sbjct: 121 SHLSAAASPTLGGEQGSLFHKLPLLPPRKYARKSPQAFRDDSYGVKRHSMVTKKPEWWWR 180

Query: 181 TLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVV 240
           TLACVPYLMALQMSSTAYYL+PLLEHL+VDNLIFYVPG+VQ LPWWFPMLYFNLAYFGVV
Sbjct: 181 TLACVPYLMALQMSSTAYYLLPLLEHLNVDNLIFYVPGAVQNLPWWFPMLYFNLAYFGVV 240

Query: 241 RNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLV 300
           RNKELPHF+RFHVMMGMLL T+LDI+WY SNF+PLIHYNGTY+MQYWAAV FIYIS L +
Sbjct: 241 RNKELPHFIRFHVMMGMLLGTALDILWYTSNFMPLIHYNGTYSMQYWAAVGFIYISILSL 300

Query: 301 CIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           CIRSSLLGTYAKIPFI ENALIHTFF+ GRY+RPF
Sbjct: 301 CIRSSLLGTYAKIPFISENALIHTFFSTGRYFRPF 334

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BLAST of CsGy7G003790 vs. TAIR10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV)

HSP 1 Score: 204.5 bits (519), Expect = 9.4e-53
Identity = 112/253 (44.27%), Postives = 160/253 (63.24%), Query Frame = 0


Query: 67  NLDT--KLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLF-HKLPLLP 126
           N+D+  KL LS +   ++  +E+   S+   S+   +AA S         LF + LP L 
Sbjct: 38  NVDSSAKLRLSASSISRRCPREIAPLSATA-SVDFAAAATS------SNQLFANGLPPLA 97

Query: 127 PRKYAKKGP----RAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMP 186
           P     + P    R  +DD + +K    + ++P+WW RTLACVPYL++LQ+S   +Y+ P
Sbjct: 98  PGLRRHRRPIEPARVAKDDFFKIKLPK-IAERPEWWWRTLACVPYLISLQISDVGFYVQP 157

Query: 187 LLE-HLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLET 246
            LE H  + ++I+++PG++ R P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLET
Sbjct: 158 FLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLET 217

Query: 247 SLDIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENAL 306
           +L +IW  SNF PLIH+ G + M YW A+ F YI  LL CIR +L G YA+IPF+ + A 
Sbjct: 218 ALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAAS 277

Query: 307 IHTFFNIGRYYRP 312
           IHT FN+G + RP
Sbjct: 278 IHTLFNLGGFQRP 282

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BLAST of CsGy7G003790 vs. TAIR10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-46
Identity = 104/212 (49.06%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 92  SRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQK 151
           SRG+ +S++SA++S  L+GEQGSL   LP+LP R+     PRA +D   S  R   +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 152 PKWWLRTLACVPYLMAL----QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPML 211
           P+WW RTLAC+PYLM L      + TAY+L P LE  D + L +   G++ RLP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 212 YFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQYWAAV 271
           YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S ++PL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 272 AFIYISSLLVCIRSSLLGTYAKIPFIFENALI 300
           AF Y+ ++L  IR +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of CsGy7G003790 vs. TAIR10
Match: AT1G04945.3 (HIT-type Zinc finger family protein)

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-42
Identity = 96/196 (48.98%), Postives = 129/196 (65.82%), Query Frame = 0


Query: 92  SRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQK 151
           SRG+ +S++SA++S  L+GEQGSL   LP+LP R+     PRA +D   S  R   +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 152 PKWWLRTLACVPYLMAL----QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPML 211
           P+WW RTLAC+PYLM L      + TAY+L P LE  D + L +   G++ RLP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 212 YFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQYWAAV 271
           YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S ++PL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 272 AFIYISSLLVCIRSSL 284
           AF Y+ ++L  IR +L
Sbjct: 241 AFAYLFTVLESIRCAL 253

[Close]

BLAST of CsGy7G003790 vs. Swiss-Prot
Match: sp|Q9ZQZ9|TI204_ARATH (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.7e-51
Identity = 112/253 (44.27%), Postives = 160/253 (63.24%), Query Frame = 0


Query: 67  NLDT--KLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLF-HKLPLLP 126
           N+D+  KL LS +   ++  +E+   S+   S+   +AA S         LF + LP L 
Sbjct: 38  NVDSSAKLRLSASSISRRCPREIAPLSATA-SVDFAAAATS------SNQLFANGLPPLA 97

Query: 127 PRKYAKKGP----RAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMP 186
           P     + P    R  +DD + +K    + ++P+WW RTLACVPYL++LQ+S   +Y+ P
Sbjct: 98  PGLRRHRRPIEPARVAKDDFFKIKLPK-IAERPEWWWRTLACVPYLISLQISDVGFYVQP 157

Query: 187 LLE-HLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLET 246
            LE H  + ++I+++PG++ R P WF M+Y  L Y  VV+NKELPH++RFH+MMGMLLET
Sbjct: 158 FLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLET 217

Query: 247 SLDIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENAL 306
           +L +IW  SNF PLIH+ G + M YW A+ F YI  LL CIR +L G YA+IPF+ + A 
Sbjct: 218 ALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQIPFMTDAAS 277

Query: 307 IHTFFNIGRYYRP 312
           IHT FN+G + RP
Sbjct: 278 IHTLFNLGGFQRP 282

[Close]

BLAST of CsGy7G003790 vs. Swiss-Prot
Match: sp|Q8GZ79|TI201_ARATH (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-45
Identity = 104/212 (49.06%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 92  SRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQK 151
           SRG+ +S++SA++S  L+GEQGSL   LP+LP R+     PRA +D   S  R   +T+K
Sbjct: 61  SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSF-RFPPMTKK 120

Query: 152 PKWWLRTLACVPYLMAL----QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPML 211
           P+WW RTLAC+PYLM L      + TAY+L P LE  D + L +   G++ RLP WF M 
Sbjct: 121 PQWWWRTLACLPYLMPLHETWMYAETAYHLHPFLE--DFEFLTYPFLGAIGRLPSWFLMA 180

Query: 212 YFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQYWAAV 271
           YF +AY G+VR KE PHF RFHV+MGMLLE +L +I   S ++PL  Y G + M +W AV
Sbjct: 181 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAV 240

Query: 272 AFIYISSLLVCIRSSLLGTYAKIPFIFENALI 300
           AF Y+ ++L  IR +L G YA IPF+ + A I
Sbjct: 241 AFAYLFTVLESIRCALAGMYADIPFVCDAAYI 269

[Close]

BLAST of CsGy7G003790 vs. Swiss-Prot
Match: sp|Q9ZST8|TIC20_PEA (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-33
Identity = 86/239 (35.98%), Postives = 133/239 (55.65%), Query Frame = 0


Query: 65  SANLDTKLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPP 124
           +  +  K+A+S  ++    S E K    RGM+ + +SA +S  LSG Q  L   +P+LP 
Sbjct: 17  ACQIPAKVAVSSIRSFWGHSLENK---PRGMTFTDMSATSSLLLSGGQNFLSRTIPVLPT 76

Query: 125 RKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLM----ALQMSSTAYYLMPL 184
              +   PRA +D S    R   +T+KP+WW RTL+C+PYL+    A   + TAY+L P 
Sbjct: 77  LHKSSTTPRATKDSSGF--RFPPMTKKPRWWWRTLSCIPYLLPFHQAWMYARTAYHLHPF 136

Query: 185 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 244
           + +       F +  ++  LP W  + YF +AY  +VR KE PHF RFHV +GML+E +L
Sbjct: 137 IPYFQPMTYPFLM--AIGTLPRWSLIAYFLIAYLTIVRRKEWPHFFRFHVAVGMLIEIAL 196

Query: 245 DIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALI 300
            +    S ++P   Y G   M +W    F+++ + + CIR +L+G YA +PF+ + A I
Sbjct: 197 QVTGIVSRWMPRSFYWGKLGMHFWTTAFFVFLFTTIECIRCALVGMYADVPFVCDAAYI 248

[Close]

BLAST of CsGy7G003790 vs. TrEMBL
Match: tr|A0A0A0K289|A0A0A0K289_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045570 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 9.9e-174
Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQC 60
           MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVV PQC
Sbjct: 26  MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQC 85

Query: 61  RRLGSANLDTKLALSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP 120
           RRLGSANLDTKLALSIAKTKQKP KELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP
Sbjct: 86  RRLGSANLDTKLALSIAKTKQKPCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLP 145

Query: 121 LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL 180
           LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL
Sbjct: 146 LLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPL 205

Query: 181 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 240
           LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL
Sbjct: 206 LEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSL 265

Query: 241 DIIWYASNFLPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 300
           DIIWYASNF+PLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH
Sbjct: 266 DIIWYASNFMPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIH 325

Query: 301 TFFNIGRYYRPF 313
           TFFNIGRYYRPF
Sbjct: 326 TFFNIGRYYRPF 337

[Close]

BLAST of CsGy7G003790 vs. TrEMBL
Match: tr|A0A1S3C1G8|A0A1S3C1G8_CUCME (protein TIC 20-IV, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495554 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 3.8e-149
Identity = 267/290 (92.07%), Postives = 275/290 (94.83%), Query Frame = 0


Query: 23  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQK 82
           MFAETT  T  AAGAS+RYS VFLKRCFKPSLVVMPQCRRL SANLDTKLALSI K KQK
Sbjct: 1   MFAETT--TAAAAGASVRYSDVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60

Query: 83  PSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 142
           P KELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120

Query: 143 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 202
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180

Query: 203 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQ 262
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNF+PLIHYNGTYAMQ
Sbjct: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240

Query: 263 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 288

[Close]

BLAST of CsGy7G003790 vs. TrEMBL
Match: tr|A0A1S4E0E4|A0A1S4E0E4_CUCME (protein TIC 20-IV, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495554 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 3.0e-146
Identity = 265/290 (91.38%), Postives = 273/290 (94.14%), Query Frame = 0


Query: 23  MFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQK 82
           MFAETT  T  AAGAS+R   VFLKRCFKPSLVVMPQCRRL SANLDTKLALSI K KQK
Sbjct: 1   MFAETT--TAAAAGASVR--DVFLKRCFKPSLVVMPQCRRLASANLDTKLALSITKAKQK 60

Query: 83  PSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSV 142
           P KELKFSSSRGM ISHIS+AASP+LSGEQG LFHKLPL PPR +A+KGPRAFRDDSYSV
Sbjct: 61  PCKELKFSSSRGMLISHISSAASPHLSGEQGRLFHKLPLWPPRNHARKGPRAFRDDSYSV 120

Query: 143 KRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 202
           KRQSGVTQKP+WWLRTLACVPYLMA+QMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW
Sbjct: 121 KRQSGVTQKPEWWLRTLACVPYLMAVQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPW 180

Query: 203 WFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQ 262
           WFPMLYFNLAYFGVVRNKELPHF RFHVMMGMLLETSLDIIWYASNF+PLIHYNGTYAMQ
Sbjct: 181 WFPMLYFNLAYFGVVRNKELPHFFRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQ 240

Query: 263 YWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           YWAAV FIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF
Sbjct: 241 YWAAVGFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 286

[Close]

BLAST of CsGy7G003790 vs. TrEMBL
Match: tr|B9RW66|B9RW66_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1176330 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.0e-66
Identity = 134/288 (46.53%), Postives = 189/288 (65.62%), Query Frame = 0


Query: 29  TPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKL----ALSIAKTKQKPS 88
           +P   AA A+ RY GV +  C K  L   P      +   ++       LS+++T Q  +
Sbjct: 26  SPAVVAALAAHRYKGVIVDGCTK-ILACKPSSSNSSTVGFESNSPFLPRLSLSRTSQGYN 85

Query: 89  KELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKR 148
           + L  SSS+    SH+S AAS  L G+Q ++ H +P LP R+ + + PRA++ D + +  
Sbjct: 86  QPLHASSSKEKKFSHLS-AASTSLFGDQNNVLHGIPRLPTRRRSPELPRAYKSDFFRLPF 145

Query: 149 QSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWF 208
              + +KP+WW RTLAC+PYL++L MS T  ++ P LEH D   L+++VPG+V RLP +F
Sbjct: 146 PV-LAEKPEWWWRTLACLPYLISLYMSDTGNFIQPFLEHYDYFGLVYFVPGAVSRLPAYF 205

Query: 209 PMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPLIHYNGTYAMQYW 268
           PM+Y+ +A  GVV+NK++PHF RFH+MMGMLLET+L ++WY SNF PLIH+NGTY M YW
Sbjct: 206 PMVYYYIALLGVVKNKQVPHFFRFHLMMGMLLETALQVVWYTSNFFPLIHFNGTYGMYYW 265

Query: 269 AAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           A V F YI  LL C+R +L G YA++P I + AL+HT FNIG + RPF
Sbjct: 266 AGVGFAYILILLQCVRCALAGGYAQMPLISDAALVHTMFNIGGFQRPF 310

[Close]

BLAST of CsGy7G003790 vs. TrEMBL
Match: tr|W9RNE4|W9RNE4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022185 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62
Identity = 124/240 (51.67%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 74  LSIAKTKQKPSKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPR 133
           +S + + Q+  +EL   SS+GM ISHISA++S +LSG+QG L    P L  ++ +   P+
Sbjct: 49  VSSSWSSQEHCRELHSVSSKGMPISHISASSSVFLSGDQGGLSGGTPRLSNKRRSLMRPQ 108

Query: 134 AFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLD-VDNLIFY 193
           A    S S+     +T+KP+WW RTLA +PYL++LQ+S T +++ PLL H D  ++LI+Y
Sbjct: 109 ACTSSSDSL-HYPALTEKPEWWWRTLASIPYLISLQISDTGFFVQPLLSHYDKFEDLIYY 168

Query: 194 VPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFLPL 253
           +PG V+R   WFPMLY  + + GVV+ KE PHF R+HV+M MLLET+L ++W+ SNF+PL
Sbjct: 169 IPGGVKRWSMWFPMLYCYVTFIGVVKKKEWPHFFRYHVIMAMLLETALQVVWHTSNFMPL 228

Query: 254 IHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF 313
           IH+NGT+ M YWAAVAFIYI   L CIR +L G Y KIPFI E+ALIHT +++G +YRPF
Sbjct: 229 IHFNGTFGMYYWAAVAFIYIFISLECIRCALGGKYVKIPFISESALIHTLYHVGGFYRPF 287

The following BLAST results are available for this feature:

BLAST of CsGy7G003790 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43568.1	1.5e-173	99.04	hypothetical protein Csa_7G045570 [Cucumis sativus]	[more]
XP_004144571.2	1.5e-173	99.04	PREDICTED: protein TIC 20-IV, chloroplastic [Cucumis sativus]	[more]
XP_008455368.1	5.7e-149	92.07	PREDICTED: protein TIC 20-IV, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_016901684.1	4.5e-146	91.38	PREDICTED: protein TIC 20-IV, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_023554543.1	7.8e-130	73.43	protein TIC 20-IV, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy7G003790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03320.1	9.4e-53	44.27	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]
AT1G04940.1	1.3e-46	49.06	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	4.4e-42	48.98	HIT-type Zinc finger family protein	[more]

BLAST of CsGy7G003790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZQZ9\|TI204_ARATH	1.7e-51	44.27	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
sp\|Q8GZ79\|TI201_ARATH	2.4e-45	49.06	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
sp\|Q9ZST8\|TIC20_PEA	3.5e-33	35.98	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]

BLAST of CsGy7G003790 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K289\|A0A0A0K289_CUCSA	9.9e-174	99.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045570 PE=4 SV=1	[more]
tr\|A0A1S3C1G8\|A0A1S3C1G8_CUCME	3.8e-149	92.07	protein TIC 20-IV, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
tr\|A0A1S4E0E4\|A0A1S4E0E4_CUCME	3.0e-146	91.38	protein TIC 20-IV, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
tr\|B9RW66\|B9RW66_RICCO	4.0e-66	46.53	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1176330 PE=4 SV=1	[more]
tr\|W9RNE4\|W9RNE4_9ROSA	1.2e-62	51.67	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022185 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005691	Tic20

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G003790.1	CsGy7G003790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 127..297 e-value: 3.7E-61 score: 205.9
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	FAMILY NOT NAMED	coord: 67..312
None	No IPR available	PANTHER	PTHR33510:SF2	PROTEIN TIC 20-IV, CHLOROPLASTIC	coord: 67..312

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G003790	Cla007712	Watermelon (97103) v1	cgybwmB558
CsGy7G003790	Csa7G045570	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G003790	MELO3C018778	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G003790	ClCG02G001440	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G003790	CSPI07G04150	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G003790	Lsi11G015010	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G003790	MELO3C018778.2	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G003790	CsaV3_7G004010	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G003790	Cla97C02G027890	Watermelon (97103) v2	cgybwmbB502
CsGy7G003790	Bhi05G001558	Wax gourd	cgybwgoB633

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G003790	Watermelon (Charleston Gray)	cgybwcgB497
CsGy7G003790	Wild cucumber (PI 183967)	cgybcpiB299
CsGy7G003790	Silver-seed gourd	carcgybB0032
CsGy7G003790	Silver-seed gourd	carcgybB0641
CsGy7G003790	Silver-seed gourd	carcgybB0717
CsGy7G003790	Silver-seed gourd	carcgybB0864
CsGy7G003790	Cucumber (Chinese Long) v3	cgybcucB311
CsGy7G003790	Wax gourd	cgybwgoB655
CsGy7G003790	Bottle gourd (USVL1VR-Ls)	cgyblsiB457
CsGy7G003790	Cucumber (Gy14) v2	cgybcgybB153
CsGy7G003790	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G003790	Cucurbita maxima (Rimu)	cgybcmaB909
CsGy7G003790	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G003790	Cucurbita maxima (Rimu)	cgybcmaB953
CsGy7G003790	Cucurbita maxima (Rimu)	cgybcmaB960
CsGy7G003790	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G003790	Cucurbita moschata (Rifu)	cgybcmoB892
CsGy7G003790	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G003790	Cucurbita moschata (Rifu)	cgybcmoB943
CsGy7G003790	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G003790	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G003790	Cucurbita pepo (Zucchini)	cgybcpeB973