MELO3C018771.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C018771.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionWound-responsive family protein
Locationchr01 : 2704455 .. 2704685 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGTGAGCAACAACAGTATACTAACTTCAATTCTAATTCCTCCATCAAAACTAACTTCTCTGTTTATCCTAATCATACTTCTAGTAAGTGTTCTTCTTCTTCCAAGTATCCCACCAAATTTTCTCACAATGGCTCCATCTCTCAGGGTGAGAAAGATAAGATAAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGTTGTTGGGGCCCCAATTCATGA

mRNA sequence

ATGGCTGGTGAGCAACAACAGTATACTAACTTCAATTCTAATTCCTCCATCAAAACTAACTTCTCTGTTTATCCTAATCATACTTCTAGTAAGTGTTCTTCTTCTTCCAAGTATCCCACCAAATTTTCTCACAATGGCTCCATCTCTCAGGGTGAGAAAGATAAGATAAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGTTGTTGGGGCCCCAATTCATGA

Coding sequence (CDS)

ATGGCTGGTGAGCAACAACAGTATACTAACTTCAATTCTAATTCCTCCATCAAAACTAACTTCTCTGTTTATCCTAATCATACTTCTAGTAAGTGTTCTTCTTCTTCCAAGTATCCCACCAAATTTTCTCACAATGGCTCCATCTCTCAGGGTGAGAAAGATAAGATAAAAAAGGCTGAAGAGTCTCTTCGAACCGTCATGTATTTGAGTTGTTGGGGCCCCAATTCATGA

Protein sequence

MAGEQQQYTNFNSNSSIKTNFSVYPNHTSSKCSSSSKYPTKFSHNGSISQGEKDKIKKAEESLRTVMYLSCWGPNS
Homology
[Close]
BLAST of MELO3C018771.2 vs. NCBI nr
Match: KGN43575.1 (hypothetical protein Csa_7G046140 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-29
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MAGEQQQY-TNFNSNSSIKTNFSVYPNHTSSKCSS-SSKYPTKFSHNGSISQGEKDKIKK 60
          MAGEQQQY TNFNSNSSIKTNFS+YPNHTSSK SS  SKYPTKFSHNGS+SQGEKDKIKK
Sbjct: 1  MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSKSSSXXSKYPTKFSHNGSVSQGEKDKIKK 60

Query: 61 AEESLRTVMYLSCWGPNS 77
          AEESLRTVMYLSCWGPNS
Sbjct: 61 AEESLRTVMYLSCWGPNS 78

[Close]
BLAST of MELO3C018771.2 vs. NCBI nr
Match: XP_019090384.1 (PREDICTED: uncharacterized protein LOC109128467 [Camelina sativa])

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 0 

Query: 31 KCSSSSKYPTKFSHNGSISQGEKDKIKKAEESLRTVMYLSCWGPN 76
          + SS  K P+     G IS  E +K KK E+SLRTVMYLSCWGPN
Sbjct: 45 RSSSQGKRPSSSVSAGVISSAESEKAKKTEDSLRTVMYLSCWGPN 89

[Close]
BLAST of MELO3C018771.2 vs. NCBI nr
Match: XP_002872503.1 (uncharacterized protein LOC9310684 [Arabidopsis lyrata subsp. lyrata] >EFH48762.1 predicted protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 63 SSGESEKAKKAEESLRTVMYLSCWGPN 89

[Close]
BLAST of MELO3C018771.2 vs. NCBI nr
Match: KDP20875.1 (hypothetical protein JCGZ_21346 [Jatropha curcas])

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-04
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 0 

Query: 33 SSSSKYPTKF----SHNGSISQGEKDKIKKAEESLRTVMYLSCWGPN 76
          SSSSK    F    S +G+    + DK+K+AEESLRTVMYLSCWGPN
Sbjct: 44 SSSSKQARLFSGAVSDSGAFKANKNDKLKQAEESLRTVMYLSCWGPN 90

[Close]
BLAST of MELO3C018771.2 vs. NCBI nr
Match: NP_192765.1 (Wound-responsive family protein [Arabidopsis thaliana] >AAC62808.1 contains similarity to Solanum lycopersicum (tomato) wound-induced protein (GB:X59882) [Arabidopsis thaliana] >CAB39780.1 probable wound-induced protein [Arabidopsis thaliana] >CAB78150.1 probable wound-induced protein [Arabidopsis thaliana] >AAM63015.1 probable wound-induced protein [Arabidopsis thaliana] >ABE02398.1 At4g10270 [Arabidopsis thaliana] >AEE82862.1 Wound-responsive family protein [Arabidopsis thaliana])

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 64 SSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]
BLAST of MELO3C018771.2 vs. TAIR10
Match: AT4G10270.1 (Wound-responsive family protein)

HSP 1 Score: 53.5 bits (127), Expect = 6.5e-08
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 64 SSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]
BLAST of MELO3C018771.2 vs. TAIR10
Match: AT4G10265.1 (Wound-responsive family protein)

HSP 1 Score: 44.7 bits (104), Expect = 3.0e-05
Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0 

Query: 47 SISQGEK---------DKIKKAEESLRTVMYLSCWGPN 76
          S+SQ +K         +K K+AEESLRTVMYLSCWGP+
Sbjct: 46 SVSQAKKLSSSSIDYTNKTKQAEESLRTVMYLSCWGPS 83

[Close]
BLAST of MELO3C018771.2 vs. TrEMBL
Match: tr|A0A0A0K1Q2|A0A0A0K1Q2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0 

Query: 1  MAGEQQQY-TNFNSNSSIKTNFSVYPNHTSSKCSS-SSKYPTKFSHNGSISQGEKDKIKK 60
          MAGEQQQY TNFNSNSSIKTNFS+YPNHTSSK SS  SKYPTKFSHNGS+SQGEKDKIKK
Sbjct: 1  MAGEQQQYTTNFNSNSSIKTNFSIYPNHTSSKSSSXXSKYPTKFSHNGSVSQGEKDKIKK 60

Query: 61 AEESLRTVMYLSCWGPNS 77
          AEESLRTVMYLSCWGPNS
Sbjct: 61 AEESLRTVMYLSCWGPNS 78

[Close]
BLAST of MELO3C018771.2 vs. TrEMBL
Match: tr|O82615|O82615_ARATH (At4g10270 OS=Arabidopsis thaliana OX=3702 GN=F24G24.70 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 64 SSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]
BLAST of MELO3C018771.2 vs. TrEMBL
Match: tr|A0A1J3HJC3|A0A1J3HJC3_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LC_TR9554_c0_g1_i1_g.33883 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 63 SSGESEKAKKAEESLRTVMYLSCWGPN 89

[Close]
BLAST of MELO3C018771.2 vs. TrEMBL
Match: tr|A0A1J3DBQ0|A0A1J3DBQ0_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR12192_c1_g1_i1_g.39043 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 63 SSGESEKAKKAEESLRTVMYLSCWGPN 89

[Close]
BLAST of MELO3C018771.2 vs. TrEMBL
Match: tr|A0A1J3K3A6|A0A1J3K3A6_NOCCA (Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=MP_TR4248_c0_g1_i1_g.11137 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.4e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0 

Query: 49 SQGEKDKIKKAEESLRTVMYLSCWGPN 76
          S GE +K KKAEESLRTVMYLSCWGPN
Sbjct: 63 SSGESEKAKKAEESLRTVMYLSCWGPN 89

The following BLAST results are available for this feature:
BLAST of MELO3C018771.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43575.11.9e-2992.31hypothetical protein Csa_7G046140 [Cucumis sativus][more]
XP_019090384.12.1e-0457.78PREDICTED: uncharacterized protein LOC109128467 [Camelina sativa][more]
XP_002872503.13.6e-0485.19uncharacterized protein LOC9310684 [Arabidopsis lyrata subsp. lyrata] >EFH48762.... [more]
KDP20875.13.6e-0459.57hypothetical protein JCGZ_21346 [Jatropha curcas][more]
NP_192765.13.6e-0485.19Wound-responsive family protein [Arabidopsis thaliana] >AAC62808.1 contains simi... [more]
BLAST of MELO3C018771.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G10270.16.5e-0885.19Wound-responsive family protein[more]
AT4G10265.13.0e-0557.89Wound-responsive family protein[more]
BLAST of MELO3C018771.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C018771.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K1Q2|A0A0A0K1Q2_CUCSA1.2e-2992.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046140 PE=4 SV=1[more]
tr|O82615|O82615_ARATH2.4e-0485.19At4g10270 OS=Arabidopsis thaliana OX=3702 GN=F24G24.70 PE=2 SV=1[more]
tr|A0A1J3HJC3|A0A1J3HJC3_NOCCA2.4e-0485.19Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=LC_TR9554_c0_g1_i1_... [more]
tr|A0A1J3DBQ0|A0A1J3DBQ0_NOCCA2.4e-0485.19Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=GA_TR12192_c1_g1_i1... [more]
tr|A0A1J3K3A6|A0A1J3K3A6_NOCCA2.4e-0485.19Uncharacterized protein OS=Noccaea caerulescens OX=107243 GN=MP_TR4248_c0_g1_i1_... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018771.2.1MELO3C018771.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 29..74
e-value: 6.7E-12
score: 46.2
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090FAMILY NOT NAMEDcoord: 26..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..54
NoneNo IPR availablePANTHERPTHR33090:SF21SUBFAMILY NOT NAMEDcoord: 26..75

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018771.2Csa7G046140Cucumber (Chinese Long) v2cumedB509
MELO3C018771.2CSPI07G04240Wild cucumber (PI 183967)cpimedB523
MELO3C018771.2Lsi11G015100Bottle gourd (USVL1VR-Ls)lsimedB101
MELO3C018771.2Cla007721Watermelon (97103) v1medwmB237
MELO3C018771.2Cla97C02G027810Watermelon (97103) v2medwmbB164
MELO3C018771.2Bhi05G001569Wax gourdmedwgoB221
MELO3C018771.2CsaV3_7G004080Cucumber (Chinese Long) v3cucmedB536
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018771.2Cucumber (Gy14) v2cgybmedB465
MELO3C018771.2Cucumber (Gy14) v1cgymedB020
MELO3C018771.2Cucumber (Gy14) v1cgymedB246
MELO3C018771.2Cucurbita maxima (Rimu)cmamedB107
MELO3C018771.2Cucurbita maxima (Rimu)cmamedB225
MELO3C018771.2Cucurbita maxima (Rimu)cmamedB534
MELO3C018771.2Cucurbita maxima (Rimu)cmamedB642
MELO3C018771.2Cucurbita maxima (Rimu)cmamedB884
MELO3C018771.2Cucurbita moschata (Rifu)cmomedB096
MELO3C018771.2Cucurbita moschata (Rifu)cmomedB212
MELO3C018771.2Cucurbita moschata (Rifu)cmomedB521
MELO3C018771.2Cucurbita moschata (Rifu)cmomedB577
MELO3C018771.2Cucurbita moschata (Rifu)cmomedB630
MELO3C018771.2Cucurbita moschata (Rifu)cmomedB670
MELO3C018771.2Cucurbita pepo (Zucchini)cpemedB261
MELO3C018771.2Cucurbita pepo (Zucchini)cpemedB721
MELO3C018771.2Cucurbita pepo (Zucchini)cpemedB817
MELO3C018771.2Wild cucumber (PI 183967)cpimedB454
MELO3C018771.2Melon (DHL92) v3.6.1medmedB062
MELO3C018771.2Melon (DHL92) v3.6.1medmedB099
MELO3C018771.2Bottle gourd (USVL1VR-Ls)lsimedB070
MELO3C018771.2Watermelon (Charleston Gray)medwcgB189
MELO3C018771.2Watermelon (Charleston Gray)medwcgB190
MELO3C018771.2Watermelon (Charleston Gray)medwcgB202
MELO3C018771.2Watermelon (97103) v1medwmB220
MELO3C018771.2Watermelon (97103) v1medwmB230
MELO3C018771.2Silver-seed gourdcarmedB0034
MELO3C018771.2Silver-seed gourdcarmedB0154
MELO3C018771.2Silver-seed gourdcarmedB0650
MELO3C018771.2Silver-seed gourdcarmedB0728
MELO3C018771.2Silver-seed gourdcarmedB0874
MELO3C018771.2Cucumber (Chinese Long) v3cucmedB036
MELO3C018771.2Cucumber (Chinese Long) v3cucmedB463
MELO3C018771.2Watermelon (97103) v2medwmbB157
MELO3C018771.2Watermelon (97103) v2medwmbB177
MELO3C018771.2Wax gourdmedwgoB233
MELO3C018771.2Wax gourdmedwgoB237