MELO3C018586 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018586
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Partner of Y14 and mago
Location	chr1 : 1279364 .. 1283659 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGTAGTGATGGAGGAGGAGAAGATCTGCGGAAGCAAATGACAGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGAAGACCCGATGGTACTCTTCGAAAACCCATTAAGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCCATTTACCAGTCCAAAGGGGCTCTGGTATGTGTGCCTCATGCACATTATCTTATTTCCATCTTTTCCTGCTCTCTGTTGTTTTTCTTTCTGTTTTTCCTTTCTTTTGTATTGAGCTATAGTTTCTTGCCCTTTGTGCCTTGCTCATGAAAATTCATACTAGAAAAATGAAATCGTCCTTTGAGTTGCTGTTGTGTTAATTTTTTACTTTGGTGTGTTGTAAAGGACGAAGCTAAGGGCAAAAAGTGCAATACAGTAGCCCATGACATTAGACAATCATTTCATTTGAGGAAATACATAAAAGTAAAATAAATAATGTATGTACATGAATCGTGATGGAATAGTACTGTGAAAAATGAAAATTATGAGATAATGGAAGTTTAAAGTCCTTTTAGGAAAATATTACCTCACACATGGGTTGGAGGATTCTGAACCCATGATACCGGTGTAATAAGTGCCTTTTTAACAATTCAATCAAAGATATGAGCATTTTTATGCCATAAATTTCTTATATCTTTAATGAAAAAGGAACTATAGAGATTGTACATACCTCTTGTTGACTCAATATAACTTAAGTCTACAATCACATCTCTTGAGCTGCCTCTTGTTAATTAGGCACCCTTGATAGGAGGCCTATACATCATACAGGACTCATTGGAATCCTTGCATCATCCACAATTCGATATACAAATTGAAATGAGGCAAATCACACTCATTGGTGTGCCTAGGTTGCTCTCATTGACTTTTTTTCTTTTGTTGCTTAAACTTAATCTTGGGGTGTGCTCTTTTGTGCAGTCTTTGGGGAAGAGGAACGATAGGACCTTTAGACAAGTTGAGAGGGACTTTAACAACATATGGCCCCTGATATGTTCAATGTTTATCTTAGAATGCTGTGTCACCTTTTTTTTTAATAATTACTAGTTAGGTCTCATTCTTCTTAATTAGATCCCTTTTCGCTAGTAGGGCTACGTGAGAAACCAAACCAACAATTTTAAAGGTCAATTTTTTTCTCCGGCAAAATGATGATGATTGGCTGATAAAATTTAAACAAAAGAGATTTTATTTTATGTTCTGGAAAATTGATGATTCGAGTGAAAGGCATCAATTTCATTCTATTATTTTTCTGCTAGTAAGTTTAATTCCTATATTAGTGTATCCTAGAAGTCATCATTGTGGTATACATTGGGATTACTTTTTTTTCTGTGTGCTACAGTGGAAAAAGGAGATGGCATCCCACGATGGACCTCCTGGCTATGATCCTCCGGCAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAAGAGAAGCGACTGCAGGTTTGTCATCCACTTTGATGGGATGGATATTTTATGTTTTTTATGACAGTTCAAATATTGTGGGGACTTTTTTTTTTTTGAAGAGCTTAATGGGAGTTCATTTTTTGTTTCTTTTCCCTGGGTAATATGGTGAACTGAATTTTAGAATCTCAGTTGTGTGTCATTAAATAGTCAGATGGTGAAACTCATTCAAATGACATATAGCTGCGATGATTAGGCTCAAGTAACTATGGCAACTTCTGGTAATAGAGTTTTCAGAAATTGAGTGGAGTTGTCGCATATAGTCTAAAGGTTCTAGAGTTTAATTTTAGTCCTACAATCTAATTGATGATAGTTTTCAAATAGGATTCTCTAAGTTTTCCCGTGAATAATTTTTTTGGGAGGATCATAAATTGAAAATTGCCATTAGTGTCCATATGCAATAAAATGTAGGACAAAATATAGGTAAATATATAAGAAACTAATTTTTTATCTCTTTCTTTTCTATTTACAACCATGGTTGTGACTTTAATTGTCCAATTATCCCTTGGGGAATAAGATCACCCGTATTCAAATCGGCATGCTTTTCGATCTGAATAGTTGGTTTAGCTGTTGTAGCCTAAGTGACTAAAGGAGAGTGCTCTCCAATAAGTCTATCTCAAATCTATATTATGAATCAAAATGGTAATGAATATATGAGAGCAATTGGTGAACAAAGGAAAGTATTAAAAATGATGAAAAGATACTAAATGGAATTTATCAAAAGGTAATATTTAATCAGCCACTAGTCCTACTACATCAATAGTTAGAAAGATATTTTATCTGCATCTTTGGATTTTACCGTATGCAACTTAACCTTGTTATTTTTAGAAAGGCATCTTATAACATAAAATTTGACGGGTTTAGTTTATATTTTTTATATTTATGCTGGTTCTAACTTGACCATGATTTAGAGTTTAAGTATAGCTGTGTATTTATTTTCTAACAAACAGCTGTTCATTTTTTCACTTTCCTTTTTCAGCAGGCAGCTCATGAAAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCAAAGGAAGCATACGTAGATAATAGGTTGGAATCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTGCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCGATTGATGATCCACAGTTGCCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGGTGAGGACAAATTTGCCATGATAGACTCTTGCTAATCATCTTTGCTTCAAAGTCTCGTGAAAATTTGTCAATCCATTGCATGCACATATATGTTTTATAATATTGGAATTATGTTCAAAGTTGATTTCCTTAAAAAGGTGTCGTGTACATTAGGTTTCATAGAATGCATCCAGGCAACAGTTTTCATATGAATCATATCACAATACTGATTTCAGAGCTAATATCATACTCTTTGAACAACTTTTTGCATAGATGTACCTGATATAGTTAGTTCTTTTATGATATTAAAGTCTCTCTAGGGGACATGACTTGACAAAGGGCCAACAGGTCCTGAGTTCAATCTGTAGTGGTCATCTCCCTAGGATTCAATATATTATGAATTTTCTTGATACCTAAATATTGTAAGGTCGGTGAGTTTCCTTCCACATGGTTCTTAGCAATCTCTCTCATAATAACTGTTCTATTCTTTTATGCCCTTAAGTTGGGTCTGCCACTGAAATTTTTTGTTATCTCCATGAAATCCATTGCGTACCCTCCCATATAAATTCTAGTCATGCTTCAACCTCATATAATAAGTTCTCAGTCTGCTTTCCTCTTGCATCTCCCCACTTCAAGGTCTTGTTACCAAAGTTGATAGACCCTAAAAATTGAAGAGGTGGAAACAGTCCCCAACGAATGATTAGGTTTCAAAAGTCCAACATTGACTTGAAATTCTCTCTGATCCCTTCCTAGTTGTGTAAGTATTAGTTCTAGTTTTACAGAGAATAGTACAGGAAGAATATATTATTTAACTGCTAAATTAGTTACCGCCCCTCAGACTAGAGTTGGGGTTTGGGATAACTTTTCAGACAGTTATCGTAGTCATTCTGGTGGTTGTTTGTTGCTTCTAGAGATGTAGAAGTGCTTCAGCTTTTTTATATGTCGTTGAATAAAAAGCTCCGGTTCCTTTAAAAGAAAAATGCTCCCTCTAAAAGCACATTATGTTAGAATTGACGAAGTTACTTTTGTTAATGTAATAAAGAAACATGAAAAATCTGAGCTCAAAATCTTAAGGATGACATCATTACAACATTTTCACTGAGCCTAATGGATCTTCCTCCTAGTCCTAGCATGGTCAGGAAAAAATCTAGTTGTAAGATTCAAAAGCCTATAATGTTTTTTGTACTTGGTACAAGTACAACTTGTTTAAGAGATTCATCTGTTCTTGCACTATTAGTACTCAGTGCCAAAGCCTTATAAGCCAGCATCTTCTAACTCAACTGATTATGTAAACTTCTTTTAATGAATTATGGGTACCTTTGTTGTGAGATGAAAGTTTTTTTCTTAACATTTGCAAGTTTGTTTAGTCCGTCTAATGCATTACATCATCTTTTTGATAATTTTCCTTGCATCGTTCTCCTGTTTGGATATGCAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCGGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCGCTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGA

mRNA sequence

ATGGGGAGTAGTGATGGAGGAGGAGAAGATCTGCGGAAGCAAATGACAGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGAAGACCCGATGGTACTCTTCGAAAACCCATTAAGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCCATTTACCAGTCCAAAGGGGCTCTGTGGAAAAAGGAGATGGCATCCCACGATGGACCTCCTGGCTATGATCCTCCGGCAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAAGAGAAGCGACTGCAGCAGGCAGCTCATGAAAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCAAAGGAAGCATACGTAGATAATAGGTTGGAATCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTGCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCGATTGATGATCCACAGTTGCCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCGGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCGCTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGA

Coding sequence (CDS)

ATGGGGAGTAGTGATGGAGGAGGAGAAGATCTGCGGAAGCAAATGACAGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGAAGACCCGATGGTACTCTTCGAAAACCCATTAAGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCCATTTACCAGTCCAAAGGGGCTCTGTGGAAAAAGGAGATGGCATCCCACGATGGACCTCCTGGCTATGATCCTCCGGCAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAAGAGAAGCGACTGCAGCAGGCAGCTCATGAAAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCAAAGGAAGCATACGTAGATAATAGGTTGGAATCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTGCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCGATTGATGATCCACAGTTGCCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCGGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCGCTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGA

Protein sequence

MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVEEITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS*

Homology

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BLAST of MELO3C018586 vs. Swiss-Prot
Match: PYM1_DANRE (Partner of Y14 and mago OS=Danio rerio GN=pym1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-17
Identity = 69/208 (33.17%), Postives = 103/208 (49.52%), Query Frame = 1


Query: 24  EGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGY---DP 83
           E  + +A T+RPDG+ RKP ++R GYVPQEEV +Y++K   + K  +  + PPG     P
Sbjct: 9   ESGKYIAATQRPDGSWRKPRRVRDGYVPQEEVPVYENKFVKFFK--SKPELPPGVCVETP 68

Query: 84  PAT-----DVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVEEITEAKEAYVDNRLE 143
           P T     D    +++AKRN ++KEKR QQ    K +   Q   E   E +         
Sbjct: 69  PQTQTQPSDAAGLSRTAKRNMKRKEKRRQQGQETKSEPELQPEPELQPEPEP-------- 128

Query: 144 SIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAEAQLQKTP 203
             Q LS QM +L +S +   + P           ++D  +R++  +KK+R  E   Q+  
Sbjct: 129 --QGLSQQMQQLELSAS---QGPG----------AADSARRLKNLRKKLRQVEELQQRVL 188

Query: 204 LQDMKP--EQANKLSKLETWRSELMLLE 222
             ++KP  EQ +KL + +  R EL  LE
Sbjct: 189 SGELKPSQEQLDKLGRAQALREELQQLE 191

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BLAST of MELO3C018586 vs. Swiss-Prot
Match: PYM1A_SALSA (Partner of Y14 and mago A OS=Salmo salar GN=pym1a PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-15
Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 1


Query: 27  RILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYDP------ 86
           + +A T+RPDGT RKP +++ GY PQEEV +Y++K   + K     D PPG  P      
Sbjct: 12  KYIAATQRPDGTWRKPRRVKDGYTPQEEVPVYENKFVKFFK--GKPDLPPGMSPGNAAQA 71

Query: 87  ---------PATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVEEITEAKEAYVD 146
                       ++   +K+AKRN ++KEKR QQ      ++L    VE +T A++   D
Sbjct: 72  RQQQGIPGIAENEIAGLSKTAKRNMKRKEKRKQQGPDSNVELLTN-AVETMTFAEDG--D 131

Query: 147 NRLESIQSLSSQMNELAVSTNLKVESPSSEPID---DPQLPSSDLDKRIRATKKKIRMAE 206
           N                        +P+S P     DP    ++  K+I+  KKK+R  E
Sbjct: 132 N-----------------------VTPASNPAGATYDPSSAIAEKAKKIKNIKKKLRQVE 191

Query: 207 AQLQKTPLQDMK---PEQANKLSKLETWRSELMLLEE 223
              QK    ++K    EQ  KL + +  + EL+ LEE
Sbjct: 192 ELQQKLDSGEIKQATKEQQEKLGRAKALQGELLQLEE 200

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BLAST of MELO3C018586 vs. Swiss-Prot
Match: PYM1_BOVIN (Partner of Y14 and mago OS=Bos taurus GN=PYM1 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.8e-14
Identity = 61/214 (28.50%), Postives = 103/214 (48.13%), Query Frame = 1


Query: 21  TLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYDP 80
           T + G + +A T+RPDGT RK  +++ GYVPQEEV +Y++K   + K  +  + PPG  P
Sbjct: 7   TDETGGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFK--SKPELPPGLSP 66

Query: 81  PATDVKTK----------TKSAKRNERKKEKRLQQAAHEKDKVLEQVVVEEITEAKEAYV 140
            AT   T           +K+AKRN ++KEKR QQ    + + L +  +E+++  + A V
Sbjct: 67  EATAPITASRPEGGEPALSKTAKRNLKRKEKRRQQQEKGEAEALSR-TLEKVSLGETAQV 126

Query: 141 DNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAE-- 200
            +  ++ ++                 +P++         +++  K+I+  KKK+R  E  
Sbjct: 127 PSAPQASRA-----------------APTAASDQPDSAATTEKAKKIKNLKKKLRQVEEL 186

Query: 201 -AQLQKTPLQDMKPEQANKLSKLETWRSELMLLE 222
             ++Q   +     EQ  KL++      EL  LE
Sbjct: 187 QQRIQAGEISQPSKEQLEKLARRRALEEELEDLE 200

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BLAST of MELO3C018586 vs. Swiss-Prot
Match: PYM1_HUMAN (Partner of Y14 and mago OS=Homo sapiens GN=PYM1 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 64/220 (29.09%), Postives = 98/220 (44.55%), Query Frame = 1


Query: 19  SKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGY 78
           S    E  + +A T+RPDGT RK  +++ GYVPQEEV +Y++K   + K  +  + PPG 
Sbjct: 6   SPAATETGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFK--SKPELPPGL 65

Query: 79  DPPATDVKTK----------TKSAKRNERKKEKRLQQ----AAHEKDKVLEQVVVEEITE 138
            P AT   T           +K+AKRN ++KEKR QQ     A    + L++V +EE  +
Sbjct: 66  SPEATAPVTPSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGEAEALSRTLDKVSLEETAQ 125

Query: 139 AKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKI 198
              A   +R                       +P++         +++  K+I+  KKK+
Sbjct: 126 LPSAPQGSR----------------------AAPTAASDQPDSAATTEKAKKIKNLKKKL 185

Query: 199 RMAE---AQLQKTPLQDMKPEQANKLSKLETWRSELMLLE 222
           R  E    ++Q   +     EQ  KL++      EL  LE
Sbjct: 186 RQVEELQQRIQAGEVSQPSKEQLEKLARRRALEEELEDLE 201

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BLAST of MELO3C018586 vs. Swiss-Prot
Match: PYM1_MOUSE (Partner of Y14 and mago OS=Mus musculus GN=Pym1 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 62/208 (29.81%), Postives = 98/208 (47.12%), Query Frame = 1


Query: 27  RILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQSKGALWKKEMASHDGPPGYDPPATDVK 86
           + +A T+RPDGT RK  +++ GYVPQEEV +Y++K   + K  +  + PPG  P AT   
Sbjct: 14  KYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFK--SKPELPPGLSPEATTPV 73

Query: 87  TK----------TKSAKRNERKKEKRLQQAAHEKDKVLEQVVVEEITEAKEAYVDNRLES 146
           T           +K+AKRN ++KEKR QQ   EK+       +++++    A + + L+ 
Sbjct: 74  TPSRPEGGETGLSKTAKRNLKRKEKRRQQ--QEKEAEALSRTLDKVSLGDTAQIPSALQG 133

Query: 147 IQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRATKKKIRMAE---AQLQK 206
            Q           +T L    PS          +++  K+I+  +KK+R  E    ++Q 
Sbjct: 134 PQ-----------ATPLAASDPSD------SAATTEKAKKIKNLRKKLRQVEELQQRIQA 193

Query: 207 TPLQDMKPEQANKLSKLETWRSELMLLE 222
             +     EQ  KL++      EL  LE
Sbjct: 194 GEVSQPSREQLEKLARRRVLEEELEDLE 200

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BLAST of MELO3C018586 vs. TrEMBL
Match: A0A0A0K274_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066320 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-118
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDL KQMTELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGY+PP TDVKTKTKSAKRNERKKEKRLQ AAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQ-AAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLE IQSLSSQMNEL+VSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 232
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

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BLAST of MELO3C018586 vs. TrEMBL
Match: A0A061DXF2_THECC (Partner of Y14-MAGO isoform 1 OS=Theobroma cacao GN=TCM_006420 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 7.5e-72
Identity = 156/231 (67.53%), Postives = 175/231 (75.76%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           M S++GGGE+   +M ELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MASNNGGGEEQLTKMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMAS  GPPGYD PA D K KTKSAKRNERKKEKRL QAA EK K LE    +
Sbjct: 61  KGALWKKEMASQVGPPGYD-PAMDTKPKTKSAKRNERKKEKRL-QAALEKGKNLEAEADD 120

Query: 121 EI--TEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPI--DDPQLPSSDLDKR 180
           EI   +  E   D+  ES++SL+SQM ELAVS N    SP S  +   D   P  DLDK+
Sbjct: 121 EIKKEDVPEEDSDHGSESVKSLTSQMTELAVSENPVPTSPPSNSVQASDADAPVQDLDKK 180

Query: 181 IRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKL 228
           IRA KKKIR+ EAQ QKTP QDMKPEQ  KL+KLE WR EL LLE+++ +L
Sbjct: 181 IRALKKKIRLTEAQQQKTPQQDMKPEQLEKLAKLEGWRQELKLLEDKKAEL 229

[Close]

BLAST of MELO3C018586 vs. TrEMBL
Match: A0A0B0MUI6_GOSAR (Partner of Y14 and mago OS=Gossypium arboreum GN=F383_03167 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.4e-70
Identity = 151/228 (66.23%), Postives = 172/228 (75.44%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           M S++GGGE   K+  EL K LKEGERIL P+RRPDGTLRKP++IRAGYVPQEEVAIYQS
Sbjct: 1   MASNNGGGEQQSKKTAELGKPLKEGERILEPSRRPDGTLRKPVRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMAS  GPPGYDPP TD K KTKSAKRNERKKEKR+ QAA EK K  E V  +
Sbjct: 61  KGALWKKEMASQVGPPGYDPP-TDTKLKTKSAKRNERKKEKRV-QAALEKGKNSEAVAGD 120

Query: 121 EI--TEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPID--DPQLPSSDLDKR 180
           EI      E  +D+  ESI+SL+SQM +LAV  NL   SP S  +D  D   P+ DLDK+
Sbjct: 121 EIKGDGLTEEDLDHGSESIKSLTSQMTDLAVFQNLVSTSPLSNSVDASDAVTPAQDLDKK 180

Query: 181 IRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQR 225
           IRA KKKIR+ EAQ QKTP QDMKPEQ  KL+KLE WR EL LLE+++
Sbjct: 181 IRALKKKIRLVEAQQQKTPQQDMKPEQLEKLAKLEGWREELKLLEDKK 226

[Close]

BLAST of MELO3C018586 vs. TrEMBL
Match: A0A0B0Q2W2_GOSAR (Partner of Y14 and mago OS=Gossypium arboreum GN=F383_10526 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-68
Identity = 151/231 (65.37%), Postives = 177/231 (76.62%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           M S++ GGE+  ++M ELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MASNNVGGEEQLQKMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMAS   PPGYDPPA D K KTKSAKRNERKKEKRL QAA EK K LE+V  +
Sbjct: 61  KGALWKKEMASQVVPPGYDPPA-DAKPKTKSAKRNERKKEKRL-QAALEKGKNLEEVSDD 120

Query: 121 EI--TEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPID--DPQLPSSDLDKR 180
           E    +  E  +D   +S++SL+SQM++LA S+N    SP S  ++  D   P  DLDK+
Sbjct: 121 ETKREDVPEEDLDGS-KSVKSLTSQMSDLAFSSNPVSTSPPSNTVEASDAGAPVLDLDKK 180

Query: 181 IRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKL 228
           IRA KKK+R+AEAQ QKTP QDMKPEQ  KL+K+E WR EL  LE Q+ +L
Sbjct: 181 IRALKKKVRLAEAQQQKTPQQDMKPEQLEKLAKVEGWREELKFLEGQKAEL 228

[Close]

BLAST of MELO3C018586 vs. TrEMBL
Match: V4T1G8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002345mg PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.8e-68
Identity = 149/236 (63.14%), Postives = 176/236 (74.58%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGSS+GGG++  K+M ELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQ+EVAIYQS
Sbjct: 1   MGSSNGGGDEELKRMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQS 60

Query: 61  KGALWKKEM-ASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVV 120
           KGAL +KE+ A  + PPGYD P  D K KTKS KRNERKKEKR QQAA EK K++E++V 
Sbjct: 61  KGALLRKELTALQEAPPGYD-PELDAKPKTKSVKRNERKKEKRQQQAALEKGKIVEKLVD 120

Query: 121 EEITEAKEAYVDNRLE---SIQSLSSQMNELAVSTNLKVESPSSEPID--DPQLPSSDLD 180
            EI   +    +N      S  SL+SQMNEL+VS N  VE+P S+  D  D   P  D+D
Sbjct: 121 GEIKTEEVVSAENLSHGSASTDSLTSQMNELSVSANPVVENPLSDAKDPGDAGAPGQDID 180

Query: 181 KRIRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSS 231
           KRIRA KKKIR+AEAQ QK   Q++KPEQ  KLSKLE W +EL LLEE++  L +S
Sbjct: 181 KRIRAIKKKIRLAEAQQQKAGQQELKPEQLEKLSKLEGWHNELKLLEEKKADLEAS 235

[Close]

BLAST of MELO3C018586 vs. TAIR10
Match: AT1G11400.1 (AT1G11400.1 partner of Y14-MAGO)

HSP 1 Score: 202.2 bits (513), Expect = 3.5e-52
Identity = 118/223 (52.91%), Postives = 142/223 (63.68%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGS  G   +  K+M ELSK LKEGERIL PTRRPDGTLRKPI+IR GY P++EV  YQS
Sbjct: 1   MGSRSG---EQGKRMAELSKNLKEGERILEPTRRPDGTLRKPIRIRPGYTPEDEVVKYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KG+L KKEMAS  GPPGY+P     K KTK+AKRNERKKEKRLQ  A            E
Sbjct: 61  KGSLMKKEMAS-QGPPGYEPDPAP-KPKTKAAKRNERKKEKRLQATA------------E 120

Query: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           +   +++    N  +S+  L+S+M  L VS+N  V   +     +P     D++KRIRA 
Sbjct: 121 KANSSEDGSASNGSQSVNVLASEMEALDVSSNNDVCGGA----PNPGTTGEDVEKRIRAL 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQ 224
           KKKIR+ EAQ QKT  +D+ PEQ  K SKLE WR EL  LE++
Sbjct: 181 KKKIRLTEAQQQKTASRDLNPEQLEKFSKLEEWRQELKALEDK 202

[Close]

BLAST of MELO3C018586 vs. NCBI nr
Match: gi|659110235|ref|XP_008455121.1| (PREDICTED: partner of Y14 and mago isoform X1 [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-123
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 232
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231

[Close]

BLAST of MELO3C018586 vs. NCBI nr
Match: gi|659110243|ref|XP_008455125.1| (PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo])

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQ AAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQ-AAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 232
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of MELO3C018586 vs. NCBI nr
Match: gi|778724564|ref|XP_011658831.1| (PREDICTED: partner of Y14 and mago-like isoform X1 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 1.6e-120
Identity = 225/231 (97.40%), Postives = 228/231 (98.70%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDL KQMTELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGY+PP TDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLE IQSLSSQMNEL+VSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 232
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 231

[Close]

BLAST of MELO3C018586 vs. NCBI nr
Match: gi|778724586|ref|XP_011658835.1| (PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-118
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           MGSSDGGGEDL KQMTELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MGSSDGGGEDLCKQMTELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMASHDGPPGY+PP TDVKTKTKSAKRNERKKEKRLQ AAHEKDKVLEQVVVE
Sbjct: 61  KGALWKKEMASHDGPPGYEPPTTDVKTKTKSAKRNERKKEKRLQ-AAHEKDKVLEQVVVE 120

Query: 121 EITEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180
           EITEAKEAYVDNRLE IQSLSSQMNEL+VSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT
Sbjct: 121 EITEAKEAYVDNRLEPIQSLSSQMNELSVSTNLKVESPSSEPIDDPQLPSSDLDKRIRAT 180

Query: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 232
           KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS
Sbjct: 181 KKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKLNSSS 230

[Close]

BLAST of MELO3C018586 vs. NCBI nr
Match: gi|590683268|ref|XP_007041554.1| (Partner of Y14-MAGO isoform 1 [Theobroma cacao])

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71
Identity = 156/231 (67.53%), Postives = 175/231 (75.76%), Query Frame = 1


Query: 1   MGSSDGGGEDLRKQMTELSKTLKEGERILAPTRRPDGTLRKPIKIRAGYVPQEEVAIYQS 60
           M S++GGGE+   +M ELSKTLKEGERILAPTRRPDGTLRKPI+IRAGYVPQEEVAIYQS
Sbjct: 1   MASNNGGGEEQLTKMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQS 60

Query: 61  KGALWKKEMASHDGPPGYDPPATDVKTKTKSAKRNERKKEKRLQQAAHEKDKVLEQVVVE 120
           KGALWKKEMAS  GPPGYD PA D K KTKSAKRNERKKEKRL QAA EK K LE    +
Sbjct: 61  KGALWKKEMASQVGPPGYD-PAMDTKPKTKSAKRNERKKEKRL-QAALEKGKNLEAEADD 120

Query: 121 EI--TEAKEAYVDNRLESIQSLSSQMNELAVSTNLKVESPSSEPI--DDPQLPSSDLDKR 180
           EI   +  E   D+  ES++SL+SQM ELAVS N    SP S  +   D   P  DLDK+
Sbjct: 121 EIKKEDVPEEDSDHGSESVKSLTSQMTELAVSENPVPTSPPSNSVQASDADAPVQDLDKK 180

Query: 181 IRATKKKIRMAEAQLQKTPLQDMKPEQANKLSKLETWRSELMLLEEQRLKL 228
           IRA KKKIR+ EAQ QKTP QDMKPEQ  KL+KLE WR EL LLE+++ +L
Sbjct: 181 IRALKKKIRLTEAQQQKTPQQDMKPEQLEKLAKLEGWRQELKLLEDKKAEL 229

The following BLAST results are available for this feature:

BLAST of MELO3C018586 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PYM1_DANRE	3.4e-17	33.17	Partner of Y14 and mago OS=Danio rerio GN=pym1 PE=2 SV=1	[more]
PYM1A_SALSA	3.2e-15	30.88	Partner of Y14 and mago A OS=Salmo salar GN=pym1a PE=2 SV=1	[more]
PYM1_BOVIN	7.8e-14	28.50	Partner of Y14 and mago OS=Bos taurus GN=PYM1 PE=2 SV=1	[more]
PYM1_HUMAN	1.0e-13	29.09	Partner of Y14 and mago OS=Homo sapiens GN=PYM1 PE=1 SV=1	[more]
PYM1_MOUSE	1.0e-13	29.81	Partner of Y14 and mago OS=Mus musculus GN=Pym1 PE=1 SV=2	[more]

BLAST of MELO3C018586 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K274_CUCSA	1.1e-118	96.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066320 PE=4 SV=1	[more]
A0A061DXF2_THECC	7.5e-72	67.53	Partner of Y14-MAGO isoform 1 OS=Theobroma cacao GN=TCM_006420 PE=4 SV=1	[more]
A0A0B0MUI6_GOSAR	5.4e-70	66.23	Partner of Y14 and mago OS=Gossypium arboreum GN=F383_03167 PE=4 SV=1	[more]
A0A0B0Q2W2_GOSAR	1.3e-68	65.37	Partner of Y14 and mago OS=Gossypium arboreum GN=F383_10526 PE=4 SV=1	[more]
V4T1G8_9ROSI	3.8e-68	63.14	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002345mg PE=4 SV=1	[more]

BLAST of MELO3C018586 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11400.1	3.5e-52	52.91	partner of Y14-MAGO	[more]

BLAST of MELO3C018586 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110235\|ref\|XP_008455121.1\|	1.2e-123	100.00	PREDICTED: partner of Y14 and mago isoform X1 [Cucumis melo]	[more]
gi\|659110243\|ref\|XP_008455125.1\|	1.1e-121	99.57	PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo]	[more]
gi\|778724564\|ref\|XP_011658831.1\|	1.6e-120	97.40	PREDICTED: partner of Y14 and mago-like isoform X1 [Cucumis sativus]	[more]
gi\|778724586\|ref\|XP_011658835.1\|	1.5e-118	96.97	PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus]	[more]
gi\|590683268\|ref\|XP_007041554.1\|	1.1e-71	67.53	Partner of Y14-MAGO isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015362	WIBG_mago-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:1903259	exon-exon junction complex disassembly
cellular_component	GO:0031981	nuclear lumen
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU43236	melon EST collection version 4.0	transcribed_cluster
MU44046	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018586T1	MELO3C018586T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU43236	MU43236	transcribed_cluster
MU44046	MU44046	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015362	WIBG family	PFAM	PF09282	Mago-bind	coord: 25..51 score: 5.3
IPR015362	WIBG family	SMART	SM01273	Mago_bind_2	coord: 25..51 score: 2.0
IPR015362	WIBG family	unknown	SSF101931	Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain	coord: 23..51 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 210..230 score: -coord: 170..190 score: -coord: 96..116 scor
None	No IPR available	PANTHER	PTHR22959	PYM PROTEIN	coord: 4..230 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018586	Csa7G066320	Cucumber (Chinese Long) v2	cumeB530
MELO3C018586	Cla012931	Watermelon (97103) v1	mewmB206
MELO3C018586	ClCG09G016220	Watermelon (Charleston Gray)	mewcgB176
MELO3C018586	Cla97C09G177970	Watermelon (97103) v2	mewmbB224
MELO3C018586	Bhi05G000782	Wax gourd	mewgoB220
MELO3C018586	CSPI07G06100	Wild cucumber (PI 183967)	cpimeB538
MELO3C018586	Cucsa.218430	Cucumber (Gy14) v1	cgymeB379
MELO3C018586	Lsi03G006930	Bottle gourd (USVL1VR-Ls)	lsimeB247
MELO3C018586	CsGy7G005780	Cucumber (Gy14) v2	cgybmeB468
MELO3C018586	CsaV3_7G007080	Cucumber (Chinese Long) v3	cucmeB548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C018586	Watermelon (97103) v1	mewmB217
MELO3C018586	Cucurbita pepo (Zucchini)	cpemeB225
MELO3C018586	Cucurbita pepo (Zucchini)	cpemeB394
MELO3C018586	Cucurbita pepo (Zucchini)	cpemeB604
MELO3C018586	Bottle gourd (USVL1VR-Ls)	lsimeB253
MELO3C018586	Silver-seed gourd	carmeB0289
MELO3C018586	Silver-seed gourd	carmeB0378
MELO3C018586	Silver-seed gourd	carmeB0726
MELO3C018586	Watermelon (97103) v2	mewmbB174
MELO3C018586	Wax gourd	mewgoB198
MELO3C018586	Melon (DHL92) v3.5.1	memeB094
MELO3C018586	Cucurbita maxima (Rimu)	cmameB098
MELO3C018586	Cucurbita maxima (Rimu)	cmameB463
MELO3C018586	Cucurbita maxima (Rimu)	cmameB672
MELO3C018586	Cucurbita moschata (Rifu)	cmomeB085
MELO3C018586	Cucurbita moschata (Rifu)	cmomeB454
MELO3C018586	Cucurbita moschata (Rifu)	cmomeB665
MELO3C018586	Watermelon (Charleston Gray)	mewcgB189