CSPI07G06100 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAGTACATAAAAGTTTTCCTTCTTCAACCGCCACCGCCACCGCGTGCGTCTCTTCGCCCGTCTCTTCACACCAGCGCCGCCGCAACCTCCTCTACCGGACGACGACGACGACTGCCGCCGAACGATGCCGGTAAGTCTTTTTTTCTCTTCTGTTCCTTCTCTCTGTCACGTTGTTCTCTCTAACTCTTTCCCGCAGCTTCATGGGCCAAACTAGGTGTGGAGTTTGCAATTTTCGTCTGAACTCCCTCTTTTGGGCCAAATACCCCTAGGTGAAAGAAATGTTGGATGTACTTATGTTTACAATTCGTGTTCTGATTTATTTTAACTTAAATTATACTGAAAAAATCAAAATTTAGATACAAAAAATTTCTCATTTTTAATAAGAGTCTAAAGTGAGAGTGTAACAGGAAGAATGGTTTTAGTGTACAAGTCCTTCAAAACTAGTGAATGATCTGAACAATTACGTGTTTTTGTATGAAATTGAAGGATGAGTTGTTGAGGATATGAGGTTTTCCCCCCTTTTTTGGATAAGAAACAGTTCATTGCTGAATGAAATATCAAAAGCAGGAGAGGGCCATGATAGATACATAGAAACCTGAAAAAAGAGGAGGGGGAGCCCATGCATAAAGGTAAGCAAGCATTCATCAATCCTGAAAACAAGAACTAACAAAAATATGAAGAGCCTATTGGATGTTACATATGATAGGGTTTAGGGTTTTTTCCCCTTCAAGTTTTAGTTTTATTAGTAGCTTGATTAAGATTGGTGAGCATGCAAGAAAGTATAGGGTTCAAGAGCCTATTTGATGTTGCATATTATGGAAGCAAATCAGCATGATACTGTTTTGAATTGATGCAGAACATAATGCTAGGTTTTGAGCTCATTTTCCTCAAACTGCAAAGCTTGTTACTAACTTTTTTCTTTTTCATCTTTCAATTATGTATAGTTTTTCTTTTTTTATTTGTATGGAAAAATATTATATACTATTCAAAATGAGGAGTGAGAATTTAAAAAATTCTATGGTTATGTCATATGGGGGTTGCAAACAATCAAAGTTATCTCACGTTATCTATGTGTCAAGTAAAGCCCTTATGCTCGTCATAATCAAAGATGATTTTGTTGGTCCGTCTTCACATATATATTTATTTATTTATTTATTTTAATTAGTGATATCAATGCTCTGCAATAAGCATTACTTTTTATATAAAAAAACGTTTTCCATTTCTTAAATTTGTAATTTGAATTTTGATGATGGTTTCCTTTACTTTTCAGGATTGATGAATGGGTAGATCCTTAGGATCCTTGGGAAGAAGCTTTGGCTGGCTATTGAGGAATGTATGTGCGTAATCTTTCTTTGCATACATATTACTATGCTTTGGCTGTTTGGCAGTTGTGCTTTCTATTGTTTTGATTTTTCAATTCTGGAAGGTAGAGAGAGGCTTTTTTTTCTTATTTTTATTTTGGCTTGATTCTTTTTTCTTTTTAAAAAATACAGTGTCAATTTTTTTATTGATAAGGGGATTTATGGGTTTTCATATTTTTGTTAGTTCTTGTTTCTGCCACTAGTCTACTTTACTAAAGTTTTTATTAGCCAAGCAGGTAATTGTTATTTTAGATTGATCACTTTCTCATATCTTATCTTTCTTTGATTATGCATCATGTCCCTAACAAAAACTCTTGTGAGTTCTTCACAAAGATGGTATATTATTACAGAATTAGGTTGTGCTTTTTTATTTTTTATTTTAGGATTTCTTTCTGTGTTATTACAAAATGATAAAGGTCATGAAGTTCTAGAAATTGAATAAAAGGTTTGAACATGCCTATGTTTTTTGTTGATGTTGTGCTAATGTCAGCATTGTTATCGTTATGGGTTCAACCTCCATAAGGCCTTCAATGGATATAAGAAACTTCCAATACAAATGGGTTCACTTAAGAGAATAACCACTTAGGATTTAGGAAGCATGTCATTTCCCTTGAATATAACTCTTTTTAGTTTTTGCCATCGTACATGACTTGCTCCAGTTTGGAGTAATTGACAAAATAAGGTGGAAATCTTTTTTGAATATGATATTGAATTTTTGCAGTTCAGCAATTAATTGCCTTTTAGGCGATGGGGAGTAGTGATGGAGGTGGAGAAGATCTGTGCAAGCAAATGACGGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCAATTTACCAGTCCAAAGGGGCTCTGGTATGTGTGCCTCTTGCGCATACATTATCTTCTTTCCATCTTTTCCTGCACTCTGTTGTTTTTCCTTCCTTTTGTATTGAGATATAGTTTGTTTGCCCTTTGTGCCTTGCTCATGAAAATTCATACTAGGAAAATGAAATCGCCCTTTGAGCTACCGTTGTGTTAATTTTTACTTTGGTGTTTTGTAAAGGACGAAGCAAAGGGCAAAGCAGAGTGCAATACAGTAGCCCATGACATTAGACAATCATTTCATTTGAGGAAATGCACAAACGTAAAATAAAATATGTATGTACATGAATCGTGATGGAATAGTACTGTGAAAAATGAAAATTATGACATAATGGAAGTTAAAAGTCCTTTTAGGAAAATAATACCTCACGAGTGGGTTGGAGGCTTCTGAACCCATGATTTCTTAGAGAAAGTAGAGAGTGACTTGAAGGTTGAGCTATTGCTGATACTGGTGTAGTAAGTGCCTTTTTAACAATTTAATCAAAGATATGAGCATTTTTTTGCCATAAATTTCCTATATCTTTAATGAAAAGGAAGTATAGAGATTGTACATGCCTCTTGTTGATTCAATATAACTTTTGTTGATTCAATATAACTTAAGTCTACAATCACATCTCTTGAGCTGCCTCTTGTTAATCAGGCTCCCTCGATAGGAGGCCTATACATCATACAGGACTCATTGGAATTCTTGCATCATCCACAATTCAATATACAAATTGAAAATGAGGCAGATCACCCTCATTGGTGTGCCTTGGTTGCTCATTGACTTTTTTTTTTTTGTGCTTAAATTTAATCTTGGAGTGTGCTCATTTGTGCAGTCTATGGGGAAGAGGAACAGTAGGACCTTTAGACAAGTTGAGAGGGACTCTAACAACATATGGCCCCTCAATATGTTCAATGTTTATCTTAGATGCTGTGTCACCTTTTTTTTATAATAATTACTTGTTAGGTCTCATTCTTCTTAATTAGATCCCTTTTCCCTAGTAGGGCTTCTTGAGAAACCAAACCAACAGTTTTGTGGGTCAATTTTTTTCTCCAGTGAAATGATGATGATTGGCTGATACAATTCTAAACAAAAGAGATTTTAATATATGTTCTGGAAAATTGATGATTCAAGTGAAAGACATCAATTTCATTCTATTATTTTTCTGTTAGAAGTTTAATTCCTATACTAGTGTATCCTAGAAGTCATCATTGTGGTATTCATTGGGATTACCTTTTTTCTGTGTGCTACAGTGGAAAAAGGAGATGGCATCGCACGATGGACCTCCTGGCTATGAACCTCCGACAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAGGAGAAGCGACTGCAGGTTTGTCTTTCCCTTTGCTGGGATGGATATTTTATGTTTCTGATGACAGTTTAAATATTGTGGGGATTTCTTTTGAAGATCTTAATGGGAGTTAATTTTTTGTTTCTTTTCCCTGAGTAATATGGTCAACTGAATCTTAGAATCTCATGTGTGTGTCATTAAAAAATCAGATGGTGAAACTCGTTCGAATGATATATGGCTGCAATGATTAGCCTCAAGTAAACCATGGCAACTTCTGGGAATAGAGTTTTCAGAAATTGAGTCGAGTTGTCGCATATAGTCTAAAGGTTCTAGAGTTTTATTTTAGACCTACAATTAACTTGTGATAGTTTTCATATAGGATTCTCTAAGTTGTCCCGTGAACAATTTTTTTGGGAGGACCATAAATTGAAGATTGCCATTAGTGTTCATATGCAATAAAATGTAGACAAAATATAGGTAAATATATAAGAAACTACTTTTTTTATCTCTTATCTATTTTCAACCATGGTTGTGACTTCTATCCTCCCATTATCACTTGGGGAATAAGATCACCCGTATTCAAATCGGCATGCTTTTCTATCTGAATAGTTGGTGTAGCTGGTGTAGCCTAAGTGACTAAAGGAGAGTGCTCTCCAATAACTCCATCTCAAATCTTTATTATGAATCAAAATGGTAATGAATATATGTGAGCAATTGGTGAACAAAGGCAAAGGAAAGTATTAAAAATGATGAAAAGATACTAAATGGGATTAATCAAGGATAATATTTAATCAACCACTAGTCCCTACTACATCAATAGTTAGAAAGATATTTTATCTGCATCTTTGGATTTTACCGTATGCAACTTAACCTTGTTTTTTTGAGAAAGGCATCTTATGATATAATAACTCACGGGTTGAGTTTATATTTTTATATTTGTGCTGGTTCTAACTTGACCATGATTTAGAGTCTAAGGATAGCTGTTTATTTATTTTCTAACAAAAAGCTTTCCTTTTCTTCACTTTCCTTTTTCTCCAGGCAGCTCATGAGAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCGAAGGAAGCATACGTAGATAATAGGTTGGAACCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTTCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCAATTGATGATCCACAGTTACCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGGTGAGAACAAATTTGCCATGGTAGACTCTTGCTAATCATCTTTGCTTCAAAGTCTCGTGAAAAACTGTCAATCCATTGCATGCAAATATATGTTTAATAATATTTGAATTATGTTCAAAGTTTAAATGTCTTGATAAAGTCTTTTATGATACTAAAGTCCCTCTAGAGGACATGACTTGATAAAGGGCTAAGAGATCATGAGTTTTATCTATAGTGGCTATCTCCCTAGGATTTAATATAATATGAGTTTCATTGGTACCTAAATATTGTAAGGTCTGGCGAGTTTCCTTCTACATGGTTCTTAACTATCTCTCTCATAACAACTGAGTCAGGTCTACCACTGAAACTTTTTGTTATCTCCATGGAGTCCATTGCGTATCTTCCCATATAAATCCTAGTCATGCTTCAACCTCATACAATAAGTTCTCAGTCTGCTTTCCTCTTGCATCTTCCCACTTCGAGGTCTTGTTACCAAAGTTGATAGACCCTAAAAATTAAAGAGGTGGAAACATGAGTCCATAACGAATGATTAGGTTTCAAAAATCCAACATTGAGAAATCTTGAAATTCTTTCTCATCCTTTCCTAGTTGTATAAGTATTAGTTCTAGTTTTACAGTGAATAGTACAGGAAGAATATATTATATAACTGCCAAATTAGTTACAGCCCCCCAGACTATAGTTGGGGTTTGGGATAAGTTTTCAGACGGTTATGTAGATGATTCTGGTGGTTGTTTGTTATTTGTAGAGATGTAGAAGTTGTTCAGCTTTTTTATATGTCGTTGAATAAAAAGCTTTGATTCCTTTAAAAGGAAAAGTGCTTCCTCTTAAAGCACATCATGTTCGAATTGACGAAATTACTTTTGTTAATGCTAAGAACCATGAAAAATCTGAGTTCAAAATCATAAGGAAGTCTGCTTTCCAACATTTTCACTGAGCCTAATGAATTTTCTTCCTAGTCTCAGTATAGTTAGGAAGAAATCTAGTTGTAAGATTCAAAAGCCTATAATGTTCTTTGTACTTGATGCAAGTACAACTTGTTTGAGAAATTAATCTGTTTTTGCAATATTAGAACTCAATGCCAAAGCTTATAACAATCTAAACTACCATTTACGTAAACTTCTTTTAATGAATTATGGGTAGCTTTGTTGAGAGCTAAAGATTTGAGTTTTTTTCTTCAAGTTTCTTTAGTCCGTCTTATGCATTACAACATCTTTTTGATAATTTTCCTTGCATTGTTCTCATGTTTGGATTTGCAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCAGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCACTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGAATGAGAATGACTGCAGGCACAGCATCATTGTTCACTTTTATTTTTCCTTTATGATGAGAGAAAAAGAGACCAGAATTGCTGCAACAACCAAAAGGACTTCGATTTGCTCTTTCGAAAATCTAATCATCTGTAAAACTCTACTCGTGTGTAATTGCATTTTATTCAAACGTTCTAGCAACTCCTTGAAACTGTAGATAGTTTTGGAGACATTGATTTTCTTTTGCTTCTGAACATATGATTTATTTATGTGATTTCCAATCATAACGATGAACCAAATACTTTGGCTTATCAAATTTAGAAAAA ATGGGGAGTAGTGATGGAGGTGGAGAAGATCTGTGCAAGCAAATGACGGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCAATTTACCAGTCCAAAGGGGCTCTGTGGAAAAAGGAGATGGCATCGCACGATGGACCTCCTGGCTATGAACCTCCGACAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAGGAGAAGCGACTGCAGGCAGCTCATGAGAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCGAAGGAAGCATACGTAGATAATAGGTTGGAACCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTTCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCAATTGATGATCCACAGTTACCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCAGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCACTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGA ATGGGGAGTAGTGATGGAGGTGGAGAAGATCTGTGCAAGCAAATGACGGAGCTGAGCAAAACCCTAAAAGAAGGAGAAAGGATTCTAGCACCAACAAGGCGACCCGATGGTACTCTTCGAAAACCCATTCGGATTAGGGCCGGCTATGTTCCACAAGAAGAAGTCGCAATTTACCAGTCCAAAGGGGCTCTGTGGAAAAAGGAGATGGCATCGCACGATGGACCTCCTGGCTATGAACCTCCGACAACAGATGTAAAAACCAAGACCAAGTCAGCTAAGCGAAATGAGAGAAAGAAGGAGAAGCGACTGCAGGCAGCTCATGAGAAGGACAAAGTCTTGGAACAAGTGGTTGTTGAAGAGATCACTGAAGCGAAGGAAGCATACGTAGATAATAGGTTGGAACCCATCCAGTCATTAAGTTCCCAGATGAATGAACTTTCTGTTTCTACCAATCTGAAAGTTGAAAGCCCTTCTTCTGAGCCAATTGATGATCCACAGTTACCTTCCAGTGACCTTGACAAGAGAATTAGAGCAACTAAAAAGAAGATTCGAATGGCAGAAGCTCAGTTGCAAAAAACACCACTTCAAGATATGAAGCCAGAGCAGGCGAACAAGTTATCGAAACTAGAAACTTGGCACTCCGAACTAATGCTTCTAGAAGAACAAAGGCTAAAACTAAATTCTTCATCATGA
BLAST of CSPI07G06100 vs. Swiss-Prot
Match: PYM1_DANRE (Partner of Y14 and mago OS=Danio rerio GN=pym1 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 7.3e-12 Identity = 68/207 (32.85%), Postives = 102/207 (49.28%), Query Frame = 1
BLAST of CSPI07G06100 vs. Swiss-Prot
Match: PYM1A_SALSA (Partner of Y14 and mago A OS=Salmo salar GN=pym1a PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10 Identity = 67/216 (31.02%), Postives = 99/216 (45.83%), Query Frame = 1
BLAST of CSPI07G06100 vs. Swiss-Prot
Match: PYM1_XENTR (Partner of Y14 and mago OS=Xenopus tropicalis GN=pym1 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 5.8e-09 Identity = 65/212 (30.66%), Postives = 99/212 (46.70%), Query Frame = 1
BLAST of CSPI07G06100 vs. Swiss-Prot
Match: PYM1_BOVIN (Partner of Y14 and mago OS=Bos taurus GN=PYM1 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.7e-08 Identity = 65/218 (29.82%), Postives = 99/218 (45.41%), Query Frame = 1
BLAST of CSPI07G06100 vs. Swiss-Prot
Match: PYM1_MOUSE (Partner of Y14 and mago OS=Mus musculus GN=Pym1 PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 3.7e-08 Identity = 60/207 (28.99%), Postives = 100/207 (48.31%), Query Frame = 1
BLAST of CSPI07G06100 vs. TrEMBL
Match: A0A0A0K274_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066320 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 2.0e-117 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1
BLAST of CSPI07G06100 vs. TrEMBL
Match: A0A061DXF2_THECC (Partner of Y14-MAGO isoform 1 OS=Theobroma cacao GN=TCM_006420 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.0e-65 Identity = 152/230 (66.09%), Postives = 172/230 (74.78%), Query Frame = 1
BLAST of CSPI07G06100 vs. TrEMBL
Match: A0A0B0MUI6_GOSAR (Partner of Y14 and mago OS=Gossypium arboreum GN=F383_03167 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 7.5e-64 Identity = 148/227 (65.20%), Postives = 170/227 (74.89%), Query Frame = 1
BLAST of CSPI07G06100 vs. TrEMBL
Match: V4V0E4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002345mg PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.1e-62 Identity = 149/235 (63.40%), Postives = 175/235 (74.47%), Query Frame = 1
BLAST of CSPI07G06100 vs. TrEMBL
Match: A5BFF8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01010 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 4.1e-62 Identity = 145/235 (61.70%), Postives = 179/235 (76.17%), Query Frame = 1
BLAST of CSPI07G06100 vs. TAIR10
Match: AT1G11400.1 (AT1G11400.1 partner of Y14-MAGO) HSP 1 Score: 185.7 bits (470), Expect = 3.3e-47 Identity = 119/222 (53.60%), Postives = 142/222 (63.96%), Query Frame = 1
BLAST of CSPI07G06100 vs. NCBI nr
Match: gi|778724586|ref|XP_011658835.1| (PREDICTED: partner of Y14 and mago-like isoform X2 [Cucumis sativus]) HSP 1 Score: 429.9 bits (1104), Expect = 2.9e-117 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 1
BLAST of CSPI07G06100 vs. NCBI nr
Match: gi|778724564|ref|XP_011658831.1| (PREDICTED: partner of Y14 and mago-like isoform X1 [Cucumis sativus]) HSP 1 Score: 425.2 bits (1092), Expect = 7.1e-116 Identity = 229/231 (99.13%), Postives = 229/231 (99.13%), Query Frame = 1
BLAST of CSPI07G06100 vs. NCBI nr
Match: gi|659110243|ref|XP_008455125.1| (PREDICTED: partner of Y14 and mago isoform X2 [Cucumis melo]) HSP 1 Score: 416.8 bits (1070), Expect = 2.5e-113 Identity = 223/230 (96.96%), Postives = 226/230 (98.26%), Query Frame = 1
BLAST of CSPI07G06100 vs. NCBI nr
Match: gi|659110235|ref|XP_008455121.1| (PREDICTED: partner of Y14 and mago isoform X1 [Cucumis melo]) HSP 1 Score: 412.1 bits (1058), Expect = 6.2e-112 Identity = 223/231 (96.54%), Postives = 226/231 (97.84%), Query Frame = 1
BLAST of CSPI07G06100 vs. NCBI nr
Match: gi|590683268|ref|XP_007041554.1| (Partner of Y14-MAGO isoform 1 [Theobroma cacao]) HSP 1 Score: 256.5 bits (654), Expect = 4.4e-65 Identity = 152/230 (66.09%), Postives = 172/230 (74.78%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|