MELO3C017759 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C017759
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial ribosomal protein L51/S25/CI-B8 family protein
Location	chr7 : 24720478 .. 24724486 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCCCCTCCGGCCTTCTTTCATATAACCAACCCCCGCCCCTGCACGCATTTCCTGCCCGCCGCCGTTTCAGCCTGCCGGCGAAATCGCCGCCACCCCTTATCGCACTCTCTCGCCACTTTGAGGAATCAAAGCTACTTATCGCTATTTATTTTTTCTCCTCAGGAACACAGTGGTCTAGCCCCTTACCCTCGCCGTTGGTAAGATCGCGCCACCGCCGCTCGTTTTTCAGATCCCAAGGTTTTATTTTTTAATTTTTGTTTCGTCGGGTTATGCTGGTTTATTATCTGCACCCACGGAGAAGAAAAGCAAGAACTTTTGTTTTTGTTGATTTCTTTTGCATACGACGTTCTACTAGTCAGCATGAAAACTAAGAATGTATACCTTACAAGTTGCAAAATAATAATAACAATTAAAGAGGAAAGAAATGTTCAAGAAGATGAAAAAAAAAAAAACACACACACACACACACTCACACACACAGCTTGGGAATTGAAAAGCTGTATTTGATAAAGATGGAACTAGTGCTTTCCAAAATTTCCTTTTCAACAAAAAAAAAAAACCCAGCGGAATACAATGGACAATCAAAATAGAGAATGGGTTTAGGTGTATTGATTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGCTTTCCAAAATTTCCTTTTTCAAAAAAAAAAAAAACCCAAGCGGAATACAATGGACAATCAAAATAGAGAATGGGTTTAGGTGTATTGATTGCATTAGGCCTTCTTCTTGAATATATTAGAAACTATCAATACCTATGAACTAGAGCATAGTAGGGGGATGAGCCTTTGCTTATGAACTAGCCAGGCATTAGATGGTTTTCCAACCTTTTTGCAGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTACTGTGATTGGGGAGGAAGCAGCAGGGGCATCAGGTTTGTTGGATTGCTAAACCAGTGCCTATTAGATTACTTCATTACTGAGAATTCGGTTTTTAACTGATGGAGGTTTAAGTTTTAATCTGGACTTTGTATTTTCATTTTCCAGCATAATTACCTTACTCATATTGCTTTGTTTGAGCTTACGGTAATGAGGTTTGAGTAGGGTAGAAGTAGAAGATATTGGAAATTTCTTGCTTTTTAGAAATGAGTTTTTCAGAACAGGGTTCTTGAAGTGTGGCGAGGCACATCCATTTTTTTTTTTTTGCAGACCGTCCCTTTTTGCCTACAAAACCTACAAAATGCCCTTATCTTTTCTTTTACCTAACCCAAACCTGGAATGTCCGCGTGTCATCTCTTTAATAGAATTGTCAATGTTTAGTAATGCTAGTGATGTTTGAGGAAATTGAACCACACCATAGGGTTCTTTAAAATTATAGGCTCAAAATCAGAATCAAAACACCATATCAATTGGAATTGTAGTTTAACTTATGTTTATTCTCTCTAATGTAACACATTCCGGTTTCCAATTTTAAGCCTAAGTTTAATTTATGTTGCTTGACTTGATACAGTTCTATTTTCTTAATAACCGACAGCGTAGATTTTACATAGATTATACTGTATAAGTTGCTTTTGTGGAAGCAAACTGGAAAGATTTTTTCTTACTCATCAGTTTAGTATCAAATTGTACAGCCTCCATAGGAGGACTCTAATCAGTTGTCACATGTATGCTTGGATTCACTTATTCCAAGTTATGTTCTTTCGAGTGTGCTGTTGGGAAAACTATAGAATAGATAGCAGACCTATGCAAATCATATCCTCAATCTTGCATATATATCAAATAGATACATATGTCTACTAGCGCTTGCGTCATTGCTATGTAGGTTCTGATAAAGTGCATTTATCTGCCCAGGGAATGAGAATTCCTCTAGGAATCTCTGATTTTTTAACTTATGTTTTTCTTTGAAGCCTAAAAATCAAACATGAGAAAAGTTCCATGTTTAGAGTGGAGCCTTGCCTAGTTGACTTCCTGGGTCTCTTTGGTGGGGTGTGAAGTCAGTTAGCTTCTTGAATGCTTACCTTGGTCTTCATTTAGGAGATGTCTCGACATCTGTGTGTTTCTGGAACCAGTGGTGGGGAAAGTTCAGAAATGGTCGTCATTGTGGAAATAAGTTTTTTCTCTGGAGGGGGAAGATTAATCTTGATTCAATGTGTTTAGTAGAACTTCTATACAGTACGTCTTTCTTAGCACCTCACCTTTTTTACGGGGTCTCAGGCAGTGAGTTGAAGGGTTATTGTAAGAATTCCAGGTCTGCTATTGCGTTGGGATTTCTTATGTTCGCTCAGTTCGTTGAGTGTTCTATTGGGGATGGTCGAACACCTACATTTGGGAGAATTTCTGGGTGAATGAGAGAGACCCCGCTGTGCCTGGTTTCTTCAGCTTTATTCTTTTGGATTTTGGCTTTGCAACTTGGGTTTTTTTTCCCTTTTCTTCTTGTTCTTGAGCTTGTTTTTTGTATGCTCTTCTGTATCCTTTTATCTATCTCAATGAAAGGTTGGTTTCTTCTAAAAAAATAAAAATAGAAACTTTCCTTTATCCCTTTCCTGTAAAATAAAGCCAAGCCTTCTCTGCCCTCCCTTTCGCTGGATGAGACCCGGTTATTAGCCCAGTCATGAATCACCGGTCAACTTATCAGTGCTTCATATCATCTTGCTACTATCATATGGATCAAAAAGATAATGTAACACCCCTGTTACTTCACTAGCAGCCTAAACATTTTTCTTCATTTATAGAACATACTCGTTTATTGCTATTATCCTTATGTAGCTTTTTGAGAGTGAAACACTTTCCTGAATGATTTGAATGTCATCATTGAATTTGCAGGGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCAATCGTGGCCAGCATCCATACTTGAAGGGCTTCTACAGTAATTCCCTTTCCCTCTCAACTTTTGGTAGTTAATAGTTATAATTTACAAAGTGTTTTATGTTTGGTTTTTACCCGTATTCTTTATCTTTCACAGAAAGCAATAACAACCGGGTAGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAACGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACTAAAAATCCCAGTGTGCAAGGTACCTGGAACACAGATGTAAGATTTTGAGGGCTGGATGGATAATTTAATTATTCCTGAAGAGCTTGATATCATTTAGAGAATGTTCTTTCCATCAATAATAAGATGTTGAAACCAAACTTATTTATAGAATTGCTTGAGTTTTTGTTGTTTGTAGTGAGTCCTTATGTAACTTTTGAGGTAGTTATTATTTCCCCGGTTCTCTGAATACTTTCTGGAAGGTTTTCGGTAAAAACATGAGTTCGTCTTGAAGAATGTCTGAAACGGAATGAGGTTCTAATTTGAGTTGGTAACTTCTAATTCTAAACATTCAAAGCTGCCAACAAGAATTGAAATGATTCATCAGGCGATCCAAGATTACAGTTTTGTAGTTCTTGATTTGAACTT

mRNA sequence

CCACCCCCTCCGGCCTTCTTTCATATAACCAACCCCCGCCCCTGCACGCATTTCCTGCCCGCCGCCGTTTCAGCCTGCCGGCGAAATCGCCGCCACCCCTTATCGCACTCTCTCGCCACTTTGAGGAATCAAAGCTACTTATCGCTATTTATTTTTTCTCCTCAGGAACACAGTGGTCTAGCCCCTTACCCTCGCCGTTGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTACTGTGATTGGGGAGGAAGCAGCAGGGGCATCAGGGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCAATCGTGGCCAGCATCCATACTTGAAGGGCTTCTACAAAAGCAATAACAACCGGGTAGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAACGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACTAAAAATCCCAGTGTGCAAGGTACCTGGAACACAGATGTAAGATTTTGAGGGCTGGATGGATAATTTAATTATTCCTGAAGAGCTTGATATCATTTAGAGAATGTTCTTTCCATCAATAATAAGATGTTGAAACCAAACTTATTTATAGAATTGCTTGAGTTTTTGTTGTTTGTAGTGAGTCCTTATGTAACTTTTGAGGTAGTTATTATTTCCCCGGTTCTCTGAATACTTTCTGGAAGGTTTTCGGTAAAAACATGAGTTCGTCTTGAAGAATGTCTGAAACGGAATGAGGTTCTAATTTGAGTTGGTAACTTCTAATTCTAAACATTCAAAGCTGCCAACAAGAATTGAAATGATTCATCAGGCGATCCAAGATTACAGTTTTGTAGTTCTTGATTTGAACTT

Coding sequence (CDS)

ATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTACTGTGATTGGGGAGGAAGCAGCAGGGGCATCAGGGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCAATCGTGGCCAGCATCCATACTTGAAGGGCTTCTACAAAAGCAATAACAACCGGGTAGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAACGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACTAAAAATCCCAGTGTGCAAGGTACCTGGAACACAGATGTAAGATTTTGA

Protein sequence

MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF*

Homology

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BLAST of MELO3C017759 vs. Swiss-Prot
Match: RM51_SCHPO (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 30/105 (28.57%), Postives = 59/105 (56.19%), Query Frame = 1


Query: 10  KKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYKSNNNRV 69
           +++  SYC+WGGSS+G++ F+ +++ +  +++  +E      +G+HP ++ +Y +   +V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 70  VCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +C + M    I   A   R+S G K   ++    + NPSV+G W+
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128

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BLAST of MELO3C017759 vs. Swiss-Prot
Match: RM51_ASHGO (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 1


Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNPQLEVVTELNRGQHPYLKGFYKS 65
           ++  KK+ + YC+WGGSS+G+R F+ S ++  + EK PQ++       G HP LK  Y +
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEVVAKAG-HPVLKAEYIN 79

Query: 66  NNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTK-------NPSVQGTWN 115
             N+ +CV+N++ + +      LR S G ++     RH  K       N SV+G W+
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130

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BLAST of MELO3C017759 vs. Swiss-Prot
Match: RM51_YEAST (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-09
Identity = 31/113 (27.43%), Postives = 66/113 (58.41%), Query Frame = 1


Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNPQLEVVTELNRGQHPYLKGFYKS 65
           V+  +K+ + +C+WGGSS G+R F+ S ++  + ++ P ++    + +  HP L+  Y +
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEV-MRKSGHPLLRAEYTN 79

Query: 66  NNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRH---VTKNPSVQGTWN 115
              +V+CV+N++ + + +    L++S G  +++ RT++    + N SV+G W+
Sbjct: 80  GREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130

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BLAST of MELO3C017759 vs. Swiss-Prot
Match: RM43_MOUSE (39S ribosomal protein L43, mitochondrial OS=Mus musculus GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-07
Identity = 36/110 (32.73%), Postives = 51/110 (46.36%), Query Frame = 1


Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYK 63
           R V QL++L +S      SSRG R F+E ++  F  +NP + V         P +   Y 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTW 114
           +   R   V +   EEI S   +L +  G  V+++R    T NPS+QG W
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

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BLAST of MELO3C017759 vs. Swiss-Prot
Match: RM43_HUMAN (39S ribosomal protein L43, mitochondrial OS=Homo sapiens GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 34/111 (30.63%), Postives = 51/111 (45.95%), Query Frame = 1


Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYK 63
           R V QL++L  S    G SSRG R F+E ++  F  +NP + +         P +   Y 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +   R   +     EEI +   +L +  G  V+++R    T NPS+QG W+
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWH 131

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BLAST of MELO3C017759 vs. TrEMBL
Match: A0A0A0KU37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011700 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.5e-60
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of MELO3C017759 vs. TrEMBL
Match: A0A0D2VLX0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G136700 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-52
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFMES++P FKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMESELPTFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYK+ N RVVCVKNM PE+I   ATRLRN+LGRKVVKL+TRHVTK+PSVQGTW TDV+F
Sbjct: 61  FYKNKNERVVCVKNMTPEDILLYATRLRNALGRKVVKLKTRHVTKHPSVQGTWTTDVKF 119

[Close]

BLAST of MELO3C017759 vs. TrEMBL
Match: R0HM39_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018255mg PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-52
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEVVTEL+RGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVVTELSRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
            Y++ N RVVCVKNMDPEE+   ATRLRNSLGRKVVKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

[Close]

BLAST of MELO3C017759 vs. TrEMBL
Match: A0A0D2USP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G136700 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-52
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFMES++P FKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 32  MALRGVWQLKKLIVSYCDWGGSSRGIRAFMESELPTFKEKNPQLEVVTELIRGQHPHLKG 91

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYK+ N RVVCVKNM PE+I   ATRLRN+LGRKVVKL+TRHVTK+PSVQGTW TDV+F
Sbjct: 92  FYKNKNERVVCVKNMTPEDILLYATRLRNALGRKVVKLKTRHVTKHPSVQGTWTTDVKF 150

[Close]

BLAST of MELO3C017759 vs. TrEMBL
Match: D7LWF9_ARALL (Mitochondrial ribosomal protein L51/S25/CI-B8 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486430 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.6e-52
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEVVTEL+RGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVVTELSRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
            Y++ N RVVCVKNMDPEE+   ATRLRNSLGRKVVKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

[Close]

BLAST of MELO3C017759 vs. TAIR10
Match: AT3G59650.2 (AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.5e-51
Identity = 100/146 (68.49%), Postives = 107/146 (73.29%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEV+TEL+RGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYK---------------------------SNNNRVVCVKNMDPEEIHSCATRLRNSLGR 120
            Y                            + N RVVCVKNMDPEE+   ATRLRNSLGR
Sbjct: 61  IYSMYISPLLNTILIQRLLILAISLAQFIGNRNERVVCVKNMDPEEVLLNATRLRNSLGR 120

[Close]

BLAST of MELO3C017759 vs. NCBI nr
Match: gi|659108144|ref|XP_008454040.1| (PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 1.6e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of MELO3C017759 vs. NCBI nr
Match: gi|449468838|ref|XP_004152128.1| (PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 2.2e-60
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of MELO3C017759 vs. NCBI nr
Match: gi|763804731|gb|KJB71669.1| (hypothetical protein B456_011G136700 [Gossypium raimondii])

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-52
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFMES++P FKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 32  MALRGVWQLKKLIVSYCDWGGSSRGIRAFMESELPTFKEKNPQLEVVTELIRGQHPHLKG 91

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYK+ N RVVCVKNM PE+I   ATRLRN+LGRKVVKL+TRHVTK+PSVQGTW TDV+F
Sbjct: 92  FYKNKNERVVCVKNMTPEDILLYATRLRNALGRKVVKLKTRHVTKHPSVQGTWTTDVKF 150

[Close]

BLAST of MELO3C017759 vs. NCBI nr
Match: gi|297817268|ref|XP_002876517.1| (mitochondrial ribosomal protein L51/S25/CI-B8 family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-52
Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEVVTEL+RGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVVTELSRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
            Y++ N RVVCVKNMDPEE+   ATRLRNSLGRKVVKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

[Close]

BLAST of MELO3C017759 vs. NCBI nr
Match: gi|823245810|ref|XP_012455575.1| (PREDICTED: 54S ribosomal protein L51, mitochondrial-like [Gossypium raimondii])

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-52
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 1


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFMES++P FKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMESELPTFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYK+ N RVVCVKNM PE+I   ATRLRN+LGRKVVKL+TRHVTK+PSVQGTW TDV+F
Sbjct: 61  FYKNKNERVVCVKNMTPEDILLYATRLRNALGRKVVKLKTRHVTKHPSVQGTWTTDVKF 119

The following BLAST results are available for this feature:

BLAST of MELO3C017759 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RM51_SCHPO	1.7e-12	28.57	54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
RM51_ASHGO	2.5e-11	33.33	54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /...	[more]
RM51_YEAST	8.7e-09	27.43	54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
RM43_MOUSE	2.8e-07	32.73	39S ribosomal protein L43, mitochondrial OS=Mus musculus GN=Mrpl43 PE=1 SV=1	[more]
RM43_HUMAN	1.4e-06	30.63	39S ribosomal protein L43, mitochondrial OS=Homo sapiens GN=MRPL43 PE=1 SV=1	[more]

BLAST of MELO3C017759 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU37_CUCSA	1.5e-60	95.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011700 PE=4 SV=1	[more]
A0A0D2VLX0_GOSRA	2.6e-52	84.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G136700 PE=4 SV=1	[more]
R0HM39_9BRAS	2.6e-52	84.87	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018255mg PE=4 SV=1	[more]
A0A0D2USP7_GOSRA	2.6e-52	84.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G136700 PE=4 SV=1	[more]
D7LWF9_ARALL	2.6e-52	84.87	Mitochondrial ribosomal protein L51/S25/CI-B8 family protein OS=Arabidopsis lyra...	[more]

BLAST of MELO3C017759 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59650.2	7.5e-51	68.49	mitochondrial ribosomal protein L51/S25/CI-B8 family protein	[more]

BLAST of MELO3C017759 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108144\|ref\|XP_008454040.1\|	1.6e-63	100.00	PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo]	[more]
gi\|449468838\|ref\|XP_004152128.1\|	2.2e-60	95.80	PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis sativus]	[more]
gi\|763804731\|gb\|KJB71669.1\|	3.7e-52	84.03	hypothetical protein B456_011G136700 [Gossypium raimondii]	[more]
gi\|297817268\|ref\|XP_002876517.1\|	3.7e-52	84.87	mitochondrial ribosomal protein L51/S25/CI-B8 family protein [Arabidopsis lyrata...	[more]
gi\|823245810\|ref\|XP_012455575.1\|	3.7e-52	84.03	PREDICTED: 54S ribosomal protein L51, mitochondrial-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007741	Ribosome/NADH_DH
IPR012336	Thioredoxin-like_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003735	structural constituent of ribosome

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45048	melon EST collection version 4.0	transcribed_cluster
MU54065	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017759T1	MELO3C017759T1	mRNA
MELO3C017759T2	MELO3C017759T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54065	MU54065	transcribed_cluster
MU45048	MU45048	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C017759	Csa4G011700	Cucumber (Chinese Long) v2	cumeB312
MELO3C017759	Cla010888	Watermelon (97103) v1	mewmB507
MELO3C017759	ClCG07G015230	Watermelon (Charleston Gray)	mewcgB494
MELO3C017759	Cla97C07G142210	Watermelon (97103) v2	mewmbB499
MELO3C017759	CSPI04G02870	Wild cucumber (PI 183967)	cpimeB310
MELO3C017759	Cucsa.095260	Cucumber (Gy14) v1	cgymeB111
MELO3C017759	CmaCh14G014400	Cucurbita maxima (Rimu)	cmameB244
MELO3C017759	CmaCh06G016820	Cucurbita maxima (Rimu)	cmameB774
MELO3C017759	CmoCh06G016740	Cucurbita moschata (Rifu)	cmomeB761
MELO3C017759	CmoCh14G014760	Cucurbita moschata (Rifu)	cmomeB232
MELO3C017759	Lsi07G003370	Bottle gourd (USVL1VR-Ls)	lsimeB447
MELO3C017759	Cp4.1LG08g06020	Cucurbita pepo (Zucchini)	cpemeB817
MELO3C017759	Cp4.1LG03g13040	Cucurbita pepo (Zucchini)	cpemeB588
MELO3C017759	CsGy4G002740	Cucumber (Gy14) v2	cgybmeB269
MELO3C017759	Carg06590	Silver-seed gourd	carmeB0127
MELO3C017759	Carg15449	Silver-seed gourd	carmeB0694
MELO3C017759	CsaV3_4G002820	Cucumber (Chinese Long) v3	cucmeB315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C017759	Cucumber (Chinese Long) v3	cucmeB322
MELO3C017759	Wax gourd	mewgoB585
MELO3C017759	Cucumber (Chinese Long) v2	cumeB320