MELO3C017638 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C017638
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Myb family transcription factor
Location	chr7 : 23643067 .. 23644173 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATAGAGATGAATCTATGAGGAAGAGTTTGAGTATGGGGAATTTGAATCTTCACTCATCATGCAATAATGTTCTTGATCTTAATAACAATACCACCGCCGTCAATAATGTTACCGGTGATAATGCCGCCTCCGCCGATGACTCTGGGTATCTCTCCGATGGCCTTATTCATAATAAGAGACGCAAAGCCGCTCATGAGAGGAAGAAAGGTTCGTAATAAACCCAATTTTCCTTTTTATTTATTTTTTTTTTTCCCGTAGAGATTAATTAATCATTAATTATCGATAATTGTGGTTTACCAATTTATTGTTAGAGAAATTATCTTATTTTCAATGAACTGTATATTTGTTTTTTCTCTTTTTTAATTCGAGGATTGTCAATGAAAATATGACGTTTGAAATGATAATCAATGATTAACTTATTGTGTTGCATTGGTAACTTTGTTTTAAGAGAATCATGCACAACTTAATTGTTAAAGTACTAATAATCACTTTTCAAAATAGGTTTATATCTTTAATCCAAATATGAACCGTTTGGATTAAGAATTGAGTTTTGTGCAACATGCATGACGACTCAATTGAAAAAACAATTATATATATTTCTTCCAATGTACTCTGTGAATTAATAGAGATATCTTAATTACTAAGTCAAATTCATACATTTATTTTCAAAATCAAATTTAAACATGCTTTCTTTGAAACCTTCAAAATTAAAATCGTTCACAAGTTTATGCACCTAAATCATTTTTTTTAAAAATTTTTTCGTAACCAATAATTTTGATGATATATACATACGCATGTTTGCATATGTTAAATGATATAAATATTTCATTTATGCAGGAAAGCCATGGAGTGAGGAAGAACATAGAACATTTCTGATAGGTTTGAAGAAGTTAGGGAAAGGGGATTGGAGAGGAATTTCAAAGAATTATGTGACAACAAGAACACCAACTCAAGTAGCAAGTCATGCCCAAAAGTACTTCTTGAGGAAGATGAATGCAAATGATAAGAAGAAACGGAGAGCCAGTCTTTTTGACATACCTGAAATCAAAGTAACAATTTTAATTTATTCCTTTTTTTTTTTTTTTTTTTTACATTTATAG

mRNA sequence

ATGGAAAATAGAGATGAATCTATGAGGAAGAGTTTGAGTATGGGGAATTTGAATCTTCACTCATCATGCAATAATGTTCTTGATCTTAATAACAATACCACCGCCGTCAATAATGTTACCGGTGATAATGCCGCCTCCGCCGATGACTCTGGGTATCTCTCCGATGGCCTTATTCATAATAAGAGACGCAAAGCCGCTCATGAGAGGAAGAAAGGAAAGCCATGGAGTGAGGAAGAACATAGAACATTTCTGATAGGTTTGAAGAAGTTAGGGAAAGGGGATTGGAGAGGAATTTCAAAGAATTATGTGACAACAAGAACACCAACTCAAGTAGCAAGTCATGCCCAAAAGTACTTCTTGAGGAAGATGAATGCAAATGATAAGAAGAAACGGAGAGCCAGTCTTTTTGACATACCTGAAATCAAAGTAACAATTTTAATTTATTCCTTTTTTTTTTTTTTTTTTTTACATTTATAG

Coding sequence (CDS)

ATGGAAAATAGAGATGAATCTATGAGGAAGAGTTTGAGTATGGGGAATTTGAATCTTCACTCATCATGCAATAATGTTCTTGATCTTAATAACAATACCACCGCCGTCAATAATGTTACCGGTGATAATGCCGCCTCCGCCGATGACTCTGGGTATCTCTCCGATGGCCTTATTCATAATAAGAGACGCAAAGCCGCTCATGAGAGGAAGAAAGGAAAGCCATGGAGTGAGGAAGAACATAGAACATTTCTGATAGGTTTGAAGAAGTTAGGGAAAGGGGATTGGAGAGGAATTTCAAAGAATTATGTGACAACAAGAACACCAACTCAAGTAGCAAGTCATGCCCAAAAGTACTTCTTGAGGAAGATGAATGCAAATGATAAGAAGAAACGGAGAGCCAGTCTTTTTGACATACCTGAAATCAAAGTAACAATTTTAATTTATTCCTTTTTTTTTTTTTTTTTTTTACATTTATAG

Protein sequence

MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDIPEIKVTILIYSFFFFFFLHL*

Homology

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BLAST of MELO3C017638 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.2e-31
Identity = 69/141 (48.94%), Postives = 95/141 (67.38%), Query Frame = 1


Query: 6   ESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKA 65
           + MRKS+S+ +L+ +   N     NNN    +N   +++  A D GY S       +  +
Sbjct: 34  DPMRKSVSLNDLSQYEHPN----ANNNNNGGDN--NESSKVAQDEGYASADDAVQHQSNS 93

Query: 66  AHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNA 125
             ERK+G PW+EEEH+ FL+GL+K+GKGDWRGIS+N+V TRTPTQVASHAQKYFLR+ N 
Sbjct: 94  GRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNL 153

Query: 126 NDKKKRRASLFDIPEIKVTIL 147
           N +++RR+SLFDI    V+++
Sbjct: 154 N-RRRRRSSLFDITTDSVSVM 167

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BLAST of MELO3C017638 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 1


Query: 52  YLSDGLIHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQV 111
           Y + G   +  R +  ERKKG PW+EEEH+ FL+GLKK GKGDWR IS+N+V TRTPTQV
Sbjct: 111 YGTGGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQV 170

Query: 112 ASHAQKYFLRKMNANDKKKRRASLFDIPEIKVT 145
           ASHAQKYF+R+++   K KRRAS+ DI  + ++
Sbjct: 171 ASHAQKYFIRQLSGG-KDKRRASIHDITTVNLS 202

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BLAST of MELO3C017638 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.9e-12
Identity = 44/123 (35.77%), Postives = 63/123 (51.22%), Query Frame = 1


Query: 16  NLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAHERKKGKPW 75
           N N +S+ NN  + NNN    NN T     +   SG         K      +    + W
Sbjct: 328 NNNSNSNNNNNNNNNNNNNNTNNTTTTTTTATTTSG--------GKTNPTGKKTSLKQGW 387

Query: 76  SEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 135
           ++EEH  FL G++  GKG W+ I++ +V TRTPTQ+ SHAQKY+LR+     + K + S+
Sbjct: 388 TKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQ---KQETKNKRSI 438

Query: 136 FDI 139
            D+
Sbjct: 448 HDL 438

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BLAST of MELO3C017638 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1


Query: 61  KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 120
           ++ K + ++K+ + W+ EEH  F+  L K G  D + IS+ YV+TR PTQV +HAQKYFL
Sbjct: 161 EQEKQSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFL 220

Query: 121 R 122
           R
Sbjct: 221 R 220

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BLAST of MELO3C017638 vs. Swiss-Prot
Match: RVE7_ARATH (Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.0e-06
Identity = 39/130 (30.00%), Postives = 58/130 (44.62%), Query Frame = 1


Query: 2   ENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTA--VNNVTGDNAASADDSGYLSDGLIH 61
           E+R E +  ++  G      SCN+   +N  T++  + NV                    
Sbjct: 30  EDRSEELSSNVENG------SCNSNEGINPETSSHWIENVV------------------- 89

Query: 62  NKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYF 121
            K RK     K+ + WSEEEH  FL  +K  G+G WR I + ++ T+T  Q+ SHAQK+F
Sbjct: 90  -KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHAQKFF 131

Query: 122 LRKMNANDKK 130
            +     D +
Sbjct: 150 SKMAQEADSR 131

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BLAST of MELO3C017638 vs. TrEMBL
Match: A0A0A0KXN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025050 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.2e-68
Identity = 136/145 (93.79%), Postives = 138/145 (95.17%), Query Frame = 1


Query: 1   MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDN---AASADDSGYLSDGL 60
           MENRDESMRKSLSMGNLNLHS CNNVLDLNN TT VNNVTGDN   AAS DD+GYLSDGL
Sbjct: 45  MENRDESMRKSLSMGNLNLHS-CNNVLDLNNTTT-VNNVTGDNTAAAASTDDAGYLSDGL 104

Query: 61  IHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQK 120
           IHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKN+VTTRTPTQVASHAQK
Sbjct: 105 IHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHAQK 164

Query: 121 YFLRKMNANDKKKRRASLFDIPEIK 143
           YFLRKMNANDKKKRRASLFDIPEIK
Sbjct: 165 YFLRKMNANDKKKRRASLFDIPEIK 187

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BLAST of MELO3C017638 vs. TrEMBL
Match: M5X281_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010092mg PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.0e-41
Identity = 88/138 (63.77%), Postives = 105/138 (76.09%), Query Frame = 1


Query: 1   MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN 60
           ME  D+SM+KS SMGNL    +     D NNN   +++          D+GYLSDGLIHN
Sbjct: 40  MEKEDDSMKKSYSMGNLQAAGNA----DHNNNVVTIDH----------DAGYLSDGLIHN 99

Query: 61  KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 120
           K+ KAAHERKKG+PW+EEEHR FL GLKKLGKGDWRGI++N+VTTRTPTQVASHAQKYFL
Sbjct: 100 KKHKAAHERKKGRPWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKYFL 159

Query: 121 RKMNANDKKKRRASLFDI 139
           R+    DK+KRR+SLFD+
Sbjct: 160 RQA-TYDKRKRRSSLFDM 162

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BLAST of MELO3C017638 vs. TrEMBL
Match: A0A0D3DDN7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-39
Identity = 86/131 (65.65%), Postives = 106/131 (80.92%), Query Frame = 1


Query: 8   MRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAH 67
           +RKS+S+GNL+        L  N+N+    N  GD  A+ +D+GY SDG IH+K  ++AH
Sbjct: 50  LRKSVSLGNLD-------ALLANDNS----NGNGDPIAAVEDNGYHSDGQIHSKTGRSAH 109

Query: 68  ERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNAND 127
           E+KKGKPW+EEEHR FL+GLK+LGKGDWRGI+KN+VTTRTPTQVASHAQKYFLR +NAND
Sbjct: 110 EKKKGKPWTEEEHRIFLVGLKELGKGDWRGIAKNFVTTRTPTQVASHAQKYFLR-LNAND 168

Query: 128 KKKRRASLFDI 139
           KK+RRASLFDI
Sbjct: 170 KKRRRASLFDI 168

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BLAST of MELO3C017638 vs. TrEMBL
Match: A0A078GCL6_BRANA (BnaC07g31380D protein OS=Brassica napus GN=BnaC07g31380D PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-39
Identity = 86/131 (65.65%), Postives = 106/131 (80.92%), Query Frame = 1


Query: 8   MRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAH 67
           +RKS+S+GNL+        L  N+N+    N  GD  A+ +D+GY SDG IH+K  ++AH
Sbjct: 50  LRKSVSLGNLD-------ALLANDNS----NGNGDPIAAVEDNGYHSDGQIHSKTGRSAH 109

Query: 68  ERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNAND 127
           E+KKGKPW+EEEHR FL+GLK+LGKGDWRGI+KN+VTTRTPTQVASHAQKYFLR +NAND
Sbjct: 110 EKKKGKPWTEEEHRIFLVGLKELGKGDWRGIAKNFVTTRTPTQVASHAQKYFLR-LNAND 168

Query: 128 KKKRRASLFDI 139
           KK+RRASLFDI
Sbjct: 170 KKRRRASLFDI 168

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BLAST of MELO3C017638 vs. TrEMBL
Match: D7MV43_ARALL (Myb family transcription factor OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496330 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.4e-39
Identity = 86/132 (65.15%), Postives = 105/132 (79.55%), Query Frame = 1


Query: 7   SMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAA 66
           ++RKSLS+GNL+        L  N+++    N  GD  A+ DD+GY SDG IH+K+ K A
Sbjct: 53  ALRKSLSLGNLD-------ALLANDDS----NGNGDPIAAVDDTGYHSDGQIHSKKGKTA 112

Query: 67  HERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNAN 126
           HE+KKGKPW+EEEHR FLIGL KLGKGDWRGI+K++VTTRTPTQVASHAQKYF+R +N N
Sbjct: 113 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVTTRTPTQVASHAQKYFIR-LNVN 172

Query: 127 DKKKRRASLFDI 139
           DK+KRRASLFDI
Sbjct: 173 DKRKRRASLFDI 172

[Close]

BLAST of MELO3C017638 vs. TAIR10
Match: AT5G61620.1 (AT5G61620.1 myb-like transcription factor family protein)

HSP 1 Score: 167.9 bits (424), Expect = 4.9e-42
Identity = 85/132 (64.39%), Postives = 104/132 (78.79%), Query Frame = 1


Query: 7   SMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAA 66
           ++RKSLS+GNL+        L  N+ +    N +GD  A+ DD+GY SDG IH+K+ K A
Sbjct: 53  ALRKSLSLGNLD-------ALLANDES----NGSGDPIAAVDDTGYHSDGQIHSKKGKTA 112

Query: 67  HERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNAN 126
           HE+KKGKPW+EEEHR FLIGL KLGKGDWRGI+K++V+TRTPTQVASHAQKYF+R +N N
Sbjct: 113 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIR-LNVN 172

Query: 127 DKKKRRASLFDI 139
           DK+KRRASLFDI
Sbjct: 173 DKRKRRASLFDI 172

[Close]

BLAST of MELO3C017638 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-31
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 7   SMRKSLSMGNLNLHS-SCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKA 66
           S+RKS SMGNL+ ++ S +      +NT        D+ A     GY S+  +      +
Sbjct: 34  SIRKSASMGNLSHYTGSGSGGHGTGSNTPGSPGDVPDHVAG---DGYASEDFVAGS--SS 93

Query: 67  AHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNA 126
           + ERKKG PW+EEEHR FL+GL+KLGKGDWRGIS+NYVTTRTPTQVASHAQKYF+R+ N 
Sbjct: 94  SRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNV 153

Query: 127 NDKKKRRASLFDI 139
           + ++KRR+SLFD+
Sbjct: 154 S-RRKRRSSLFDM 160

[Close]

BLAST of MELO3C017638 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30
Identity = 67/118 (56.78%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 21  SSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAHERKKGKPWSEEEH 80
           SSC       NN +  +     N    DD GY SD ++H   R    ERK+G PW+EEEH
Sbjct: 50  SSCFRKSVSMNNLSQFDQTPDPNPT--DDGGYASDDVVHASGRN--RERKRGTPWTEEEH 109

Query: 81  RTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI 139
           R FL GL K+GKGDWRGIS+N+V TRTPTQVASHAQKYFLR+ N N +++RR+SLFDI
Sbjct: 110 RLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQN-RRRRRSSLFDI 162

[Close]

BLAST of MELO3C017638 vs. TAIR10
Match: AT5G56840.1 (AT5G56840.1 myb-like transcription factor family protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 60/96 (62.50%), Postives = 73/96 (76.04%), Query Frame = 1


Query: 43  NAASADDSGYLSDGLIHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNY 102
           +++S+  +GYLSDGL H        +RKKG PW+ EEHRTFLIGL+KLGKGDWRGIS+N+
Sbjct: 66  SSSSSSFAGYLSDGLAHK-----TPDRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNF 125

Query: 103 VTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI 139
           V T++PTQVASHAQKYFLR+      K+RR SLFD+
Sbjct: 126 VVTKSPTQVASHAQKYFLRQTTTLHHKRRRTSLFDM 156

[Close]

BLAST of MELO3C017638 vs. TAIR10
Match: AT3G16350.1 (AT3G16350.1 Homeodomain-like superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 4.1e-28
Identity = 69/143 (48.25%), Postives = 93/143 (65.03%), Query Frame = 1


Query: 8   MRKSLSMGNLNLHSSCNNVLDLN----NNTTAVNNVT----GDNAASAD---DSGYLSDG 67
           ++KS SMGNL+  +        +    ++  A +N+      D+A  ++   + GYLSD 
Sbjct: 60  IKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDD 119

Query: 68  LIHNKRRKAAH-ERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHA 127
             H         ERK+G PW+EEEHR FL+GL+KLGKGDWRGIS+NYVT+RTPTQVASHA
Sbjct: 120 PAHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHA 179

Query: 128 QKYFLRKMNANDKKKRRASLFDI 139
           QKYF+R   ++ ++KRR+SLFD+
Sbjct: 180 QKYFIRH-TSSSRRKRRSSLFDM 201

[Close]

BLAST of MELO3C017638 vs. NCBI nr
Match: gi|659107781|ref|XP_008453855.1| (PREDICTED: transcription factor MYB1R1 isoform X2 [Cucumis melo])

HSP 1 Score: 292.0 bits (746), Expect = 6.4e-76
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 1


Query: 1   MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN 60
           MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN
Sbjct: 44  MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN 103

Query: 61  KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 120
           KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL
Sbjct: 104 KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 163

Query: 121 RKMNANDKKKRRASLFDIPEIKVT 145
           RKMNANDKKKRRASLFDIPEIK +
Sbjct: 164 RKMNANDKKKRRASLFDIPEIKAS 187

[Close]

BLAST of MELO3C017638 vs. NCBI nr
Match: gi|659107779|ref|XP_008453854.1| (PREDICTED: transcription factor MYB1R1 isoform X1 [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 8.4e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


Query: 1   MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN 60
           MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN
Sbjct: 44  MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN 103

Query: 61  KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 120
           KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL
Sbjct: 104 KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 163

Query: 121 RKMNANDKKKRRASLFDIPEIK 143
           RKMNANDKKKRRASLFDIPEIK
Sbjct: 164 RKMNANDKKKRRASLFDIPEIK 185

[Close]

BLAST of MELO3C017638 vs. NCBI nr
Match: gi|778697489|ref|XP_004146936.2| (PREDICTED: myb-like protein I [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-68
Identity = 136/145 (93.79%), Postives = 138/145 (95.17%), Query Frame = 1


Query: 1   MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDN---AASADDSGYLSDGL 60
           MENRDESMRKSLSMGNLNLHS CNNVLDLNN TT VNNVTGDN   AAS DD+GYLSDGL
Sbjct: 45  MENRDESMRKSLSMGNLNLHS-CNNVLDLNNTTT-VNNVTGDNTAAAASTDDAGYLSDGL 104

Query: 61  IHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQK 120
           IHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKN+VTTRTPTQVASHAQK
Sbjct: 105 IHNKRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHAQK 164

Query: 121 YFLRKMNANDKKKRRASLFDIPEIK 143
           YFLRKMNANDKKKRRASLFDIPEIK
Sbjct: 165 YFLRKMNANDKKKRRASLFDIPEIK 187

[Close]

BLAST of MELO3C017638 vs. NCBI nr
Match: gi|1009121848|ref|XP_015877683.1| (PREDICTED: uncharacterized protein LOC107414100 [Ziziphus jujuba])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 93/137 (67.88%), Postives = 109/137 (79.56%), Query Frame = 1


Query: 2   ENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNK 61
           +  +ES++KSLSMGNL  + +     D NN+++A     GD+     +SGYLSDGLIHN 
Sbjct: 42  KQHEESLKKSLSMGNLTAYCA-----DHNNHSSA-----GDS----HESGYLSDGLIHNS 101

Query: 62  RRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLR 121
           R KAAHERKKGKPW+EEEHR FL GLK+LGKGDWRGISKN+VTTRTPTQVASHAQKYFLR
Sbjct: 102 RHKAAHERKKGKPWTEEEHRIFLAGLKELGKGDWRGISKNFVTTRTPTQVASHAQKYFLR 161

Query: 122 KMNANDKKKRRASLFDI 139
              ANDKKKRR+SLFD+
Sbjct: 162 LQAANDKKKRRSSLFDM 164

[Close]

BLAST of MELO3C017638 vs. NCBI nr
Match: gi|657944631|ref|XP_008375712.1| (PREDICTED: transcription factor MYB1R1-like [Malus domestica])

HSP 1 Score: 179.9 bits (455), Expect = 3.6e-42
Identity = 91/138 (65.94%), Postives = 109/138 (78.99%), Query Frame = 1


Query: 1   MENRDESMRKSLSMGNLNLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHN 60
           +EN+++SM+KS SMG  NLH+  N   D NNN    +N          D+GYLSDGLIHN
Sbjct: 41  LENQEDSMKKSYSMG--NLHTDGNG--DHNNNAVGADN----------DAGYLSDGLIHN 100

Query: 61  KRRKAAHERKKGKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFL 120
           KR KAAHER+KG+PW+EEEHR FL GLKKLGKGDWRGI++N+VTTRTPTQVASHAQKYFL
Sbjct: 101 KRHKAAHERRKGRPWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKYFL 160

Query: 121 RKMNANDKKKRRASLFDI 139
           R+   NDK+KRR+SLFD+
Sbjct: 161 RQA-TNDKRKRRSSLFDM 163

The following BLAST results are available for this feature:

BLAST of MELO3C017638 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MY1R1_SOLTU	8.2e-31	48.94	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
DIV_ANTMA	2.0e-24	58.06	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MYBJ_DICDI	2.9e-12	35.77	Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1	[more]
MYBI_DICDI	1.2e-08	47.54	Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1	[more]
RVE7_ARATH	7.0e-06	30.00	Protein REVEILLE 7 OS=Arabidopsis thaliana GN=RVE7 PE=2 SV=1	[more]

BLAST of MELO3C017638 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN0_CUCSA	1.2e-68	93.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025050 PE=4 SV=1	[more]
M5X281_PRUPE	8.0e-41	63.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010092mg PE=4 SV=1	[more]
A0A0D3DDN7_BRAOL	2.0e-39	65.65	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
A0A078GCL6_BRANA	2.0e-39	65.65	BnaC07g31380D protein OS=Brassica napus GN=BnaC07g31380D PE=4 SV=1	[more]
D7MV43_ARALL	3.4e-39	65.15	Myb family transcription factor OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAF...	[more]

BLAST of MELO3C017638 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61620.1	4.9e-42	64.39	myb-like transcription factor family protein	[more]
AT5G47390.1	1.3e-31	54.14	myb-like transcription factor family protein	[more]
AT1G70000.1	1.9e-30	56.78	myb-like transcription factor family protein	[more]
AT5G56840.1	2.2e-29	62.50	myb-like transcription factor family protein	[more]
AT3G16350.1	4.1e-28	48.25	Homeodomain-like superfamily protein	[more]

BLAST of MELO3C017638 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107781\|ref\|XP_008453855.1\|	6.4e-76	98.61	PREDICTED: transcription factor MYB1R1 isoform X2 [Cucumis melo]	[more]
gi\|659107779\|ref\|XP_008453854.1\|	8.4e-76	100.00	PREDICTED: transcription factor MYB1R1 isoform X1 [Cucumis melo]	[more]
gi\|778697489\|ref\|XP_004146936.2\|	1.7e-68	93.79	PREDICTED: myb-like protein I [Cucumis sativus]	[more]
gi\|1009121848\|ref\|XP_015877683.1\|	1.6e-42	67.88	PREDICTED: uncharacterized protein LOC107414100 [Ziziphus jujuba]	[more]
gi\|657944631\|ref\|XP_008375712.1\|	3.6e-42	65.94	PREDICTED: transcription factor MYB1R1-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017638T1	MELO3C017638T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 73..118 score: 3.0
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 71..121 score: 1.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 70..122 score: 4.9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 71..118 score: 1.5
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 69..121 score: 1.12
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 67..123 score: 19
None	No IPR available	PANTHER	PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	coord: 1..138 score: 3.3
None	No IPR available	PANTHER	PTHR12374:SF26	F25A4.19 PROTEIN	coord: 1..138 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C017638	Csa4G025050	Cucumber (Chinese Long) v2	cumeB312
MELO3C017638	Cla010705	Watermelon (97103) v1	mewmB506
MELO3C017638	ClCG07G017060	Watermelon (Charleston Gray)	mewcgB493
MELO3C017638	Cla97C07G144100	Watermelon (97103) v2	mewmbB498
MELO3C017638	Bhi01G001999	Wax gourd	mewgoB568
MELO3C017638	CSPI04G04190	Wild cucumber (PI 183967)	cpimeB310
MELO3C017638	Cucsa.094040	Cucumber (Gy14) v1	cgymeB111
MELO3C017638	CmaCh16G002240	Cucurbita maxima (Rimu)	cmameB304
MELO3C017638	CmaCh04G003670	Cucurbita maxima (Rimu)	cmameB702
MELO3C017638	CmoCh04G003840	Cucurbita moschata (Rifu)	cmomeB694
MELO3C017638	CmoCh16G002430	Cucurbita moschata (Rifu)	cmomeB299
MELO3C017638	Lsi07G001240	Bottle gourd (USVL1VR-Ls)	lsimeB454
MELO3C017638	Cp4.1LG14g05400	Cucurbita pepo (Zucchini)	cpemeB202
MELO3C017638	Cp4.1LG01g03470	Cucurbita pepo (Zucchini)	cpemeB425
MELO3C017638	CsGy4G004120	Cucumber (Gy14) v2	cgybmeB269
MELO3C017638	Carg16765	Silver-seed gourd	carmeB0862
MELO3C017638	Carg08040	Silver-seed gourd	carmeB0384
MELO3C017638	CsaV3_4G004280	Cucumber (Chinese Long) v3	cucmeB315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C017638	Cucurbita moschata (Rifu)	cmomeB573
MELO3C017638	Wild cucumber (PI 183967)	cpimeB407
MELO3C017638	Cucumber (Chinese Long) v2	cumeB410
MELO3C017638	Watermelon (Charleston Gray)	mewcgB470
MELO3C017638	Watermelon (97103) v1	mewmB532
MELO3C017638	Cucurbita pepo (Zucchini)	cpemeB703
MELO3C017638	Bottle gourd (USVL1VR-Ls)	lsimeB039
MELO3C017638	Cucumber (Gy14) v2	cgybmeB357
MELO3C017638	Silver-seed gourd	carmeB0710
MELO3C017638	Cucumber (Chinese Long) v3	cucmeB420
MELO3C017638	Watermelon (97103) v2	mewmbB459