CmoCh04G003840 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G003840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Myb family transcription factor
Location	Cmo_Chr04 : 1906297 .. 1908553 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAAAAAAAAAAGAAGGAAGAAGGAAACCAGCCTTAGGGTTACCAGTTTTCTCTTTGGTTGTTTGTTTCTCGGGAAAATGGTGAGGGAATCGCCGAGAAAATGTTCCCATTGTGGATTGAATGGACATAATTCGCGAACATGCAGTAATTTTGCGAAGGGGAATAATAATAATAACTATTGCGTCAAATTGTTTGGAGTTAATTTGATGGATAATGGAGATGAATCTATGCGGAAGAGTCTCAGCATGGGGAATTTGAATATTCACGTATGTAATCACAACGCCGCTGCGGCCGGAAACAATGTCGCCTGTTATAATGCCGCCGTCGCTGACGACGGTGGCTATCTTTCCGATGGCCTTATTCATAACAAGAAACGCAAAGCCGCTCTTGAGAGGAAGAAAGGTACGTAATCGTTTTTTTTTCATTCAAGAAATTGCATCATAAATCCCTATGTATTCTGAGAAATTTGTGGAGAAAAAAGGAAAATCAAAGCGTTTGTATTGAATTTTAAGCCTATTAGTTTGATTAGCGGAAATGAATCTAACTCAATCGTTGATAATACGTATTAGTAGAGATGTCGAATTCGGAGAATTCGTAAATTGTACAGAGTATAAGTTTTGTGAGATAATGCAGGAAAGCCATGGACTGAGGAGGAACATAGAACCTTTTTGGCTGGTTTGAAGAAGCTGGGGAAAGGGGATTGGAGAGGAATTTCGAAGAACTTTGTGACCACACGAACACCCACGCAAGTAGCTAGTCATGCCCAAAAGTACTTTTTGAGGAAGATGAATGCGAACGATAAGAAGAAACGCAGAGCCAGTCTTTTCGACATCCCGGAAATCAAAGTAATAGTTTGTTTTCTCAACTGCTTCTTGACGTGTGTCTCGATCAACTTCCCAAATGATTTTAGCCATATTTGTTTTAAAAATTTATAAACACCACTTCTATCGGTAAGTTTCTTCGTTTTATTATCTACTTTGTGTCGATACCAATCTATTTTTCGAACGAAAAACGACCCGAAACTTCAAAAACTAAACATCGAAACTTAAATGGTTATCAAATCGGAGTTCTGCTGGAAAATTACTCTGTATATGCTTTTTAACTGTTGTTTACATTGTGTTATGTTTATATATACGTGTATAGAACAATGTTTCTCAAGAATGCCAAGCTTCATCGTCTTCAATGAGGGCTAATGGAGAAACGTCACAAATTCTGCTGCCAAAGAACAGTTCTGAGAATCAACAACAGGTGAAATTCTCATCTCTTTGATCAATTTCTGTTTATAATCTGTAAGAAATGGGTGAATTCAGCTGTTTTTACTGTATATGAACATGGTTACAGGTCAGTAATTTACCAACACAGCTTATCAATCGATTCCCTCATCTTTGTTTGGATACTCCTCATTTCGTGCCTTCAACAACTGGATCACCAGCCTCTGGTGTTGCAAATTTGCATGGGATTCCTTATGTGGTAATTATCTTGTTCTAATCTCGGATTAAAAACTTTAGCGTTTCTTAGTCATAGTAAAGAATAAGCATAATGAATGGCTTTTGGACGAGCAAAGTCGTCGTTTATTAGTAAGGCGAGAGCTTCAAGCTTGATTTCTAGTAGCGCACCCACACACAAGCACTACCCAACCAAGGGCAGACGAACCTTCTTTCTAAATGGGGTGCCCAGAGCACCTCATGGTGAACCAAATATGAACATAACGAGACACGGACGACTCGGTGTCCGGTACGTAAAACAGAACAAGTAGAGTAGGTGATGTAATGTAATGTTTGAATATGGTGACAGGTGGGAGTTTCCCCTAATAATGTTCCAATAATCCCTTTGGTGAAGCTGGGAAGGAGATCATCAGCTGTTATGGCAATGCCGAAGAGCCCAATAAGGACAAGCAGTCCGAATGCAGCAGCAGCAGCAGCAGCGTTGGTAGCCCATCCATCTGGTATTCCTCCTTCTCCAAGGTCTTCCCCTCAAAGACCGTTGATGGTGCAGTTGCAGGCTTCTGCCATGGCAGCCTCTTTTGAGACAGATGCTCTAGAGCTCAAGATTGGACTGCCCCAATCTCCACAGGCTAAGAACTTGTCTTCTCAAACTTCTGGAGCCATTAGAGTTATATGAACCAACAAGAAAAAAACAAAAATTAAAAATTAAAAAGAAATGTGAAATTCATCTTCTATAAGAAGGTTAATTAGAGTAAGAAAAAGTGTTATTTTTTTGAATGAGATGTTTGTTTTTGGCCTCCTCTCTAT

mRNA sequence

GAAAAAAAAAAAAAAAAGAAGGAAGAAGGAAACCAGCCTTAGGGTTACCAGTTTTCTCTTTGGTTGTTTGTTTCTCGGGAAAATGGTGAGGGAATCGCCGAGAAAATGTTCCCATTGTGGATTGAATGGACATAATTCGCGAACATGCAGTAATTTTGCGAAGGGGAATAATAATAATAACTATTGCGTCAAATTGTTTGGAGTTAATTTGATGGATAATGGAGATGAATCTATGCGGAAGAGTCTCAGCATGGGGAATTTGAATATTCACGTATGTAATCACAACGCCGCTGCGGCCGGAAACAATGTCGCCTGTTATAATGCCGCCGTCGCTGACGACGGTGGCTATCTTTCCGATGGCCTTATTCATAACAAGAAACGCAAAGCCGCTCTTGAGAGGAAGAAAGGAAAGCCATGGACTGAGGAGGAACATAGAACCTTTTTGGCTGGTTTGAAGAAGCTGGGGAAAGGGGATTGGAGAGGAATTTCGAAGAACTTTGTGACCACACGAACACCCACGCAAGTAGCTAGTCATGCCCAAAAGTACTTTTTGAGGAAGATGAATGCGAACGATAAGAAGAAACGCAGAGCCAGTCTTTTCGACATCCCGGAAATCAAAAACAATGTTTCTCAAGAATGCCAAGCTTCATCGTCTTCAATGAGGGCTAATGGAGAAACGTCACAAATTCTGCTGCCAAAGAACAGTTCTGAGAATCAACAACAGGTCAGTAATTTACCAACACAGCTTATCAATCGATTCCCTCATCTTTGTTTGGATACTCCTCATTTCGTGCCTTCAACAACTGGATCACCAGCCTCTGGTGTTGCAAATTTGCATGGGATTCCTTATGTGGTGGGAGTTTCCCCTAATAATGTTCCAATAATCCCTTTGGTGAAGCTGGGAAGGAGATCATCAGCTGTTATGGCAATGCCGAAGAGCCCAATAAGGACAAGCAGTCCGAATGCAGCAGCAGCAGCAGCAGCGTTGGTAGCCCATCCATCTGGTATTCCTCCTTCTCCAAGGTCTTCCCCTCAAAGACCGTTGATGGTGCAGTTGCAGGCTTCTGCCATGGCAGCCTCTTTTGAGACAGATGCTCTAGAGCTCAAGATTGGACTGCCCCAATCTCCACAGGCTAAGAACTTGTCTTCTCAAACTTCTGGAGCCATTAGAGTTATATGAACCAACAAGAAAAAAACAAAAATTAAAAATTAAAAAGAAATGTGAAATTCATCTTCTATAAGAAGGTTAATTAGAGTAAGAAAAAGTGTTATTTTTTTGAATGAGATGTTTGTTTTTGGCCTCCTCTCTAT

Coding sequence (CDS)

ATGGTGAGGGAATCGCCGAGAAAATGTTCCCATTGTGGATTGAATGGACATAATTCGCGAACATGCAGTAATTTTGCGAAGGGGAATAATAATAATAACTATTGCGTCAAATTGTTTGGAGTTAATTTGATGGATAATGGAGATGAATCTATGCGGAAGAGTCTCAGCATGGGGAATTTGAATATTCACGTATGTAATCACAACGCCGCTGCGGCCGGAAACAATGTCGCCTGTTATAATGCCGCCGTCGCTGACGACGGTGGCTATCTTTCCGATGGCCTTATTCATAACAAGAAACGCAAAGCCGCTCTTGAGAGGAAGAAAGGAAAGCCATGGACTGAGGAGGAACATAGAACCTTTTTGGCTGGTTTGAAGAAGCTGGGGAAAGGGGATTGGAGAGGAATTTCGAAGAACTTTGTGACCACACGAACACCCACGCAAGTAGCTAGTCATGCCCAAAAGTACTTTTTGAGGAAGATGAATGCGAACGATAAGAAGAAACGCAGAGCCAGTCTTTTCGACATCCCGGAAATCAAAAACAATGTTTCTCAAGAATGCCAAGCTTCATCGTCTTCAATGAGGGCTAATGGAGAAACGTCACAAATTCTGCTGCCAAAGAACAGTTCTGAGAATCAACAACAGGTCAGTAATTTACCAACACAGCTTATCAATCGATTCCCTCATCTTTGTTTGGATACTCCTCATTTCGTGCCTTCAACAACTGGATCACCAGCCTCTGGTGTTGCAAATTTGCATGGGATTCCTTATGTGGTGGGAGTTTCCCCTAATAATGTTCCAATAATCCCTTTGGTGAAGCTGGGAAGGAGATCATCAGCTGTTATGGCAATGCCGAAGAGCCCAATAAGGACAAGCAGTCCGAATGCAGCAGCAGCAGCAGCAGCGTTGGTAGCCCATCCATCTGGTATTCCTCCTTCTCCAAGGTCTTCCCCTCAAAGACCGTTGATGGTGCAGTTGCAGGCTTCTGCCATGGCAGCCTCTTTTGAGACAGATGCTCTAGAGCTCAAGATTGGACTGCCCCAATCTCCACAGGCTAAGAACTTGTCTTCTCAAACTTCTGGAGCCATTAGAGTTATATGA

Homology

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BLAST of CmoCh04G003840 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-28
Identity = 85/200 (42.50%), Postives = 114/200 (57.00%), Query Frame = 1


Query: 36  VKLFGVNLMDNGDESMRKSLSMGNLNIHV---CNHNAAAAGNNVACYNAAVADDGGYLSD 95
           + LFGV +     + MRKS+S+ +L+ +     N+N     NN +   + VA D GY S 
Sbjct: 24  IMLFGVRVKV---DPMRKSVSLNDLSQYEHPNANNNNNGGDNNES---SKVAQDEGYASA 83

Query: 96  GLIHNKKRKAALERKKGKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHA 155
                 +  +  ERK+G PWTEEEH+ FL GL+K+GKGDWRGIS+NFV TRTPTQVASHA
Sbjct: 84  DDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHA 143

Query: 156 QKYFLRKMNANDKKKRRASLFDIPEIKNNVSQECQASSSSMRANGETSQILLPKNSSENQ 215
           QKYFLR+ N N +++RR+SLFDI                        S  ++P    EN+
Sbjct: 144 QKYFLRRSNLN-RRRRRSSLFDIT---------------------TDSVSVMPIEEVENK 195

Query: 216 QQV-----SNLPTQLINRFP 228
           Q++     + LPT   N FP
Sbjct: 204 QEIPVVAPATLPTTKTNAFP 195

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BLAST of CmoCh04G003840 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-23
Identity = 57/96 (59.38%), Postives = 70/96 (72.92%), Query Frame = 1


Query: 89  YLSDGLIHNKKRKAALERKKGKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQV 148
           Y + G   +  R +  ERKKG PWTEEEH+ FL GLKK GKGDWR IS+NFV TRTPTQV
Sbjct: 111 YGTGGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQV 170

Query: 149 ASHAQKYFLRKMNANDKKKRRASLFDIPEIKNNVSQ 185
           ASHAQKYF+R+++   K KRRAS+ DI  +  + +Q
Sbjct: 171 ASHAQKYFIRQLSGG-KDKRRASIHDITTVNLSDNQ 205

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BLAST of CmoCh04G003840 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-06
Identity = 73/254 (28.74%), Postives = 111/254 (43.70%), Query Frame = 1


Query: 18  NSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNLNIHVCNHNAAAAGNNVA 77
           NS T S  +  +N +        V++++N + +   S +  N N +  N+N     N   
Sbjct: 301 NSPTTSTSSTHSNTSTPIT----VSIINNNNNNNSNSNNNNNNNNNNNNNNT---NNTTT 360

Query: 78  CYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTEEEHRTFLAGLKKLGKGDWRGISK 137
               A    GG  +        +K +L  K+G  WT+EEH  FL G++  GKG W+ I++
Sbjct: 361 TTTTATTTSGGKTNP-----TGKKTSL--KQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ 420

Query: 138 NFVTTRTPTQVASHAQKYFLRKMNANDKKK--RRASLFDIPE------IKNNV------- 197
            FV TRTPTQ+ SHAQKY+LR+      K+     SL D+ +       KNNV       
Sbjct: 421 -FVGTRTPTQIQSHAQKYYLRQKQETKNKRSIHDLSLQDLIDDNLNNSNKNNVDKNKQDD 480

Query: 198 ----SQECQASSSSMRANGETSQILLPKNSSE--NQQQVSNLPTQLINRF---PHLCLDT 247
               +Q+ + + S     G+   I   +   +   QQ     P  +I  F   P     +
Sbjct: 481 KEKKTQKTKKTKSKSSTKGDEEMITQQQQLQQQPQQQPQQKQPPTIITNFNTTPTSSQSS 537

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BLAST of CmoCh04G003840 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-06
Identity = 43/135 (31.85%), Postives = 69/135 (51.11%), Query Frame = 1


Query: 98  KKRKAALERKKGKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFL 157
           ++ K + ++K+ + WT EEH  F+  L K G  D + IS+ +V+TR PTQV +HAQKYFL
Sbjct: 161 EQEKQSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFL 220

Query: 158 -------RKMNANDKKKRRASLFD--IPEIKNNVSQECQASSSSMR------ANGETSQI 217
                  RK+ + +     A   D  + E  N+     Q SS S        AN  ++ +
Sbjct: 221 RIDRERGRKLESKESINGGADKDDDWLREEYNDEGSPTQYSSCSNSPTTNSVANPFSNSL 280

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BLAST of CmoCh04G003840 vs. TrEMBL
Match: A0A0A0KXN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025050 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.5e-124
Identity = 268/383 (69.97%), Postives = 289/383 (75.46%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNY-CVKLFGVNLMDNGDESMRKSLSMGN 60
           MVRESPRKCSHCG NGHNSRTC NF+KGN+NN Y CVKLFGVNLM+N DESMRKSLSMGN
Sbjct: 1   MVRESPRKCSHCGFNGHNSRTCGNFSKGNSNNYYYCVKLFGVNLMENRDESMRKSLSMGN 60

Query: 61  LNIHVCNH----NAAAAGNNVACYNAAVA---DDGGYLSDGLIHNKKRKAALERKKGKPW 120
           LN+H CN+    N     NNV   N A A   DD GYLSDGLIHNK+RKAA ERKKGKPW
Sbjct: 61  LNLHSCNNVLDLNNTTTVNNVTGDNTAAAASTDDAGYLSDGLIHNKRRKAAHERKKGKPW 120

Query: 121 TEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 180
           +EEEHRTFL GLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL
Sbjct: 121 SEEEHRTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 180

Query: 181 FDIPEIKNNVSQECQASSSSMRANGE-TSQILLPKNSS-ENQQQVSNLPTQLINRFPHLC 240
           FDIPEIKNN S++C AS       GE  SQILLPKN+S +NQ QV+NL TQLINRFPHLC
Sbjct: 181 FDIPEIKNNFSRDCPAS-------GELPSQILLPKNNSPDNQSQVNNLGTQLINRFPHLC 240

Query: 241 LDTPHFVPSTTGSPASGVANLHGIPYVVGVSP-NNVPIIPLVKLGRRSSAVMAMPKSPIR 300
           LDTPHF+P  T    +G ++   IP+VVGVSP NN   IPLV +GR              
Sbjct: 241 LDTPHFIPQQT----NGSSSPSSIPFVVGVSPNNNNNNIPLVNIGR-------------S 300

Query: 301 TSSPNAAAAAAALVAHPSGIPPSPRSSPQRPLMVQLQAS--AMAASFET-----DALELK 360
             SPNAA A     AHPSGIP SPRSSP R L++Q  AS  AMAA+  T     DALELK
Sbjct: 301 RVSPNAAMA-----AHPSGIPHSPRSSPTRTLLMQPGASALAMAAAASTFDQSADALELK 354

Query: 361 IGLPQSPQAKNLSSQTSGAIRVI 366
           IGLPQSPQ  NLSSQT GAIRVI
Sbjct: 361 IGLPQSPQPNNLSSQTPGAIRVI 354

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BLAST of CmoCh04G003840 vs. TrEMBL
Match: W9S9L1_9ROSA (Transcription factor OS=Morus notabilis GN=L484_017072 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69
Identity = 182/378 (48.15%), Postives = 230/378 (60.85%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFA-------KGNNNNNYCVKLFGVNLMDNGDESMRK 60
           MV+E+ RKCSHCG  GHNSRTC+N         +  N N +  KLFGVN+++  ++SM+K
Sbjct: 1   MVKEAQRKCSHCGQQGHNSRTCNNRNNVVSPRNRNGNGNGHSFKLFGVNIVEGAEDSMKK 60

Query: 61  SLSMGNLNIHVCNHNAAAAGNNVACYNAAVADD----GGYLSDGLIHNKKRKAALERKKG 120
           S SMGNL        +   G N         DD     GYLSDG++HN KRKAA ERK+G
Sbjct: 61  SRSMGNLAAL-----SGGQGKNDVVSGGDDHDDHDPEAGYLSDGVLHNVKRKAARERKRG 120

Query: 121 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRR 180
           KPWTEEEHRTFLAG+ KLGKGDWRGIS  FVTTRTPTQVASHAQKYF+RK    D+KKRR
Sbjct: 121 KPWTEEEHRTFLAGMNKLGKGDWRGISSKFVTTRTPTQVASHAQKYFIRKQAPKDRKKRR 180

Query: 181 ASLFDIPEIKNN--VSQECQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFP 240
           +SLFD+P  +++  V  +    SS ++   ETS        S +Q    N P++++NRFP
Sbjct: 181 SSLFDMPFTQSDDVVPPQGHQVSSMIKPTAETS-----SRPSRSQGLAENNPSEILNRFP 240

Query: 241 HLCLDTPHFVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSP 300
            LCLD  + VP        GVA  + +PY VG  P NV   PL+ +G R S +  +P   
Sbjct: 241 QLCLDN-YPVP-----VRPGVAPNYLVPYGVGF-PGNVQPWPLINIG-RPSYLYNVPN-- 300

Query: 301 IRTSSPNAAAAAAALVAHPSGIPPSPRSSPQRPLMVQLQASAMAASFETDALELKIGLPQ 360
           +  S  N       +V HPSGIPP PRS P  P  ++  AS  +++ +T+ LEL IG PQ
Sbjct: 301 VYGSVDN---GVPVVVTHPSGIPP-PRSPPTSP-SIKAAASKDSSADQTNGLELTIGQPQ 353

Query: 361 SPQAKNLSSQ-TSGAIRV 365
           S Q   LSS   SGAI+V
Sbjct: 361 SKQGSELSSSPASGAIKV 353

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BLAST of CmoCh04G003840 vs. TrEMBL
Match: A0A067JSE9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26305 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.3e-67
Identity = 184/380 (48.42%), Postives = 227/380 (59.74%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNL 60
           MV+E  RKCSHCG NGHNSRTC N  KG       VKLFGVN+ +  ++ M+KS S+GNL
Sbjct: 1   MVKEGTRKCSHCGQNGHNSRTC-NHGKGGAG----VKLFGVNIFEKQEQPMKKSASLGNL 60

Query: 61  NIHVCNHNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTEEEHRTF 120
              + N             NA    D GYLSDG I+ K+ KAA ERKKGKPWTEEEHRTF
Sbjct: 61  ESLIDN-------------NAHHHVDEGYLSDGYINFKRGKAANERKKGKPWTEEEHRTF 120

Query: 121 LAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD--IPEI 180
           LAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY+LR+ +A D KKRR+SLFD  + E 
Sbjct: 121 LAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYYLRQASA-DIKKRRSSLFDMTLKEP 180

Query: 181 KNNVSQE---CQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFPHLCLDTPH 240
           K   SQE     ++SSS      +S + LP  ++ +    +    Q++NRFPHLCLDTP 
Sbjct: 181 KVLTSQERPILPSNSSSQVKQASSSSLALPLRTTTDIPARAITSAQILNRFPHLCLDTPA 240

Query: 241 FVPSTTGSPASGVANLHGIPYVVG--------VSPNNVPIIPLVKLGRRSSAVMAMPKSP 300
             P+     A+ V N  GIPY++G        +        PL+++   + + +A P  P
Sbjct: 241 IGPAYL---ATSVPNYTGIPYMLGFPDDGRSFMGARTASAAPLLQMMHYNYSRLAYPFPP 300

Query: 301 IRTSSPNAAAAAAALVAHPSGIPPSPRSSPQRPLMVQLQASAMAASFETDALELKIG--L 360
              S    AA    L AHPSGI P+PRS P    + Q  +++         L+LKIG   
Sbjct: 301 --NSQGRFAATCVPLTAHPSGI-PAPRSYP-LGFLQQGSSTSPTKKENPPELDLKIGPPP 354

Query: 361 PQSPQAKNLSSQTSGAIRVI 366
           PQSPQ  +LS Q SG I VI
Sbjct: 361 PQSPQEASLSPQASGPISVI 354

[Close]

BLAST of CmoCh04G003840 vs. TrEMBL
Match: A0A061G0P9_THECC (Myb-like transcription factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_014838 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-58
Identity = 169/361 (46.81%), Postives = 208/361 (57.62%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNL--MDNGDESMRKSLSMG 60
           MV+E+ RKCSHCG NGHNSRTC    KG      CVKLFGVN+  ++  +  M+KS SM 
Sbjct: 23  MVKETGRKCSHCGHNGHNSRTCHG--KG------CVKLFGVNISAVEKQESFMKKSFSME 82

Query: 61  NLNIHVCNHNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTEEEHR 120
           +L  H   +N           N A + D GYLSDG IH++K  AA ERK+GKPWTEEEHR
Sbjct: 83  SLRSHHAEYN-----------NNAPSVDDGYLSDGQIHSRKSNAARERKRGKPWTEEEHR 142

Query: 121 TFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDIPEI 180
            FLAGL+KLGKGDWRGISK FVTTRTPTQVASHAQKYFLR+   NDKKKRR SLFD+   
Sbjct: 143 IFLAGLRKLGKGDWRGISKKFVTTRTPTQVASHAQKYFLRQA-GNDKKKRRPSLFDM--- 202

Query: 181 KNNVSQECQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFPHLCLDTPHFVP 240
                QE ++++S   +  E       + + ++  QV   P+ + NRFPHLCLD    V 
Sbjct: 203 ---AFQELESNASPPGSPAE-------QTTRDSSDQV-KAPSPIANRFPHLCLD-DRPVT 262

Query: 241 STTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIRTSSPNAAAA 300
           S T S  S     H I  + G +PN   + P  K+      + AM  + +      A A 
Sbjct: 263 SLTAS-HSFPTYYHRIQPLAGGAPNG-QVFPEAKMMPSLPFLHAMNYAGLHYGY-MAKAL 322

Query: 301 AAALVAHPSGIPPSPRSSPQRPLMVQLQASAMAASFETDALELKIGLPQSPQAKNLSSQT 360
             A  AHPSGIP     SP        +A   A+  E D LELKIG PQS +  ++ SQ 
Sbjct: 323 GCAPAAHPSGIP-----SPWSVQHSMFRAGPGASPAEKDLLELKIGPPQSSKNTSMLSQA 340

[Close]

BLAST of CmoCh04G003840 vs. TrEMBL
Match: A0A061G076_THECC (Myb-like transcription factor family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_014838 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 9.7e-58
Identity = 167/361 (46.26%), Postives = 206/361 (57.06%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNL--MDNGDESMRKSLSMG 60
           MV+E+ RKCSHCG NGHNSRTC    KG      CVKLFGVN+  ++  +  M+KS SM 
Sbjct: 1   MVKETGRKCSHCGHNGHNSRTCHG--KG------CVKLFGVNISAVEKQESFMKKSFSME 60

Query: 61  NLNIHVCNHNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTEEEHR 120
           +L  H   +N           N A + D GYLSDG IH++K  AA ERK+GKPWTEEEHR
Sbjct: 61  SLRSHHAEYN-----------NNAPSVDDGYLSDGQIHSRKSNAARERKRGKPWTEEEHR 120

Query: 121 TFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDIPEI 180
            FLAGL+KLGKGDWRGISK FVTTRTPTQVASHAQKYFLR+   NDKKKRR SLFD+   
Sbjct: 121 IFLAGLRKLGKGDWRGISKKFVTTRTPTQVASHAQKYFLRQA-GNDKKKRRPSLFDM--- 180

Query: 181 KNNVSQECQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINRFPHLCLDTPHFVP 240
                QE ++++S   +  E       + + ++  QV   P+ + NRFPHLCLD    V 
Sbjct: 181 ---AFQELESNASPPGSPAE-------QTTRDSSDQV-KAPSPIANRFPHLCLD-DRPVT 240

Query: 241 STTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIRTSSPNAAAA 300
           S T S +         P   G +PN   + P  K+      + AM  + +      A A 
Sbjct: 241 SLTASHSFPTYYHRIQPLQAGGAPNG-QVFPEAKMMPSLPFLHAMNYAGLHYGY-MAKAL 300

Query: 301 AAALVAHPSGIPPSPRSSPQRPLMVQLQASAMAASFETDALELKIGLPQSPQAKNLSSQT 360
             A  AHPSGIP     SP        +A   A+  E D LELKIG PQS +  ++ SQ 
Sbjct: 301 GCAPAAHPSGIP-----SPWSVQHSMFRAGPGASPAEKDLLELKIGPPQSSKNTSMLSQA 319

[Close]

BLAST of CmoCh04G003840 vs. TAIR10
Match: AT5G61620.1 (AT5G61620.1 myb-like transcription factor family protein)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-50
Identity = 157/377 (41.64%), Postives = 200/377 (53.05%), Query Frame = 1


Query: 1   MVRES---PRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDE-----SMR 60
           MV+E+    + CSHCG NGHN+RTC N       N   VKLFGVN+  +        ++R
Sbjct: 1   MVKETVTVAKTCSHCGHNGHNARTCLNGV-----NKASVKLFGVNISSDPIRPPEVTALR 60

Query: 61  KSLSMGNLNIHVCNHNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPW 120
           KSLS+GNL+  + N  +  +G+ +A       DD GY SDG IH+KK K A E+KKGKPW
Sbjct: 61  KSLSLGNLDALLANDESNGSGDPIAA-----VDDTGYHSDGQIHSKKGKTAHEKKKGKPW 120

Query: 121 TEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 180
           TEEEHR FL GL KLGKGDWRGI+K+FV+TRTPTQVASHAQKYF+R +N NDK+KRRASL
Sbjct: 121 TEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIR-LNVNDKRKRRASL 180

Query: 181 FDIPEIKNNVSQECQASSSSMRANGETSQILLPKNSSENQQQ---VSNLPTQLINRFPHL 240
           FDI     ++  + +   +S  A+ +T     PK      QQ     +  T++ NRF +L
Sbjct: 181 FDI-----SLEDQKEKERNSQDASTKTP----PKQPITGIQQPVVQGHTQTEISNRFQNL 240

Query: 241 CLDTPHFVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIR 300
            ++   ++P     P          PY            P +          A P+ P+R
Sbjct: 241 SME---YMPIYQPIP----------PYY---------NFPPIMYHPNYPMYYANPQVPVR 300

Query: 301 TSSPNAAAAAAALVAHPSGIPPSPRSSP-QRPLMVQLQASAMAASFETDALELKIGLPQS 360
                          HPSGI P PR  P   PL    +AS M      D L+L IGLP  
Sbjct: 301 -------------FVHPSGI-PVPRHIPIGLPLSQPSEASNMT---NKDGLDLHIGLP-- 316

Query: 361 PQAKNLSSQTS-GAIRV 365
           PQA   S  T  G I V
Sbjct: 361 PQATGASDLTGHGVIHV 316

[Close]

BLAST of CmoCh04G003840 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-38
Identity = 94/186 (50.54%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNLNIHVCN 66
           R+CSHC  NGHNSRTC N           VKLFGV L +    S+RKS SMGNL+ +  +
Sbjct: 3   RRCSHCNHNGHNSRTCPNRG---------VKLFGVRLTEG---SIRKSASMGNLSHYTGS 62

Query: 67  HNAA-AAGNNVACYNAAVADD---GGYLSDGLIHNKKRKAALERKKGKPWTEEEHRTFLA 126
            +     G+N       V D     GY S+  +      ++ ERKKG PWTEEEHR FL 
Sbjct: 63  GSGGHGTGSNTPGSPGDVPDHVAGDGYASEDFVAGSS--SSRERKKGTPWTEEEHRMFLL 122

Query: 127 GLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD-IPEIKNN 186
           GL+KLGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R+ N + ++KRR+SLFD +P+   +
Sbjct: 123 GLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVS-RRKRRSSLFDMVPDEVGD 173

Query: 187 VSQECQ 188
           +  + Q
Sbjct: 183 IPMDLQ 173

[Close]

BLAST of CmoCh04G003840 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein)

HSP 1 Score: 155.6 bits (392), Expect = 5.8e-38
Identity = 91/175 (52.00%), Postives = 108/175 (61.71%), Query Frame = 1


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNNNN------YCVKLFGVNLMDNGDESMRKSLSMGNL 66
           R CS CG NGHNSRTC        +NN        + LFGV + +      RKS+SM NL
Sbjct: 3   RSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMNNL 62

Query: 67  NIHVCNHNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTEEEHRTF 126
           +      +     N          DDGGY SD ++H   R    ERK+G PWTEEEHR F
Sbjct: 63  S----QFDQTPDPNPT--------DDGGYASDDVVHASGRNR--ERKRGTPWTEEEHRLF 122

Query: 127 LAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI 176
           L GL K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ N N +++RR+SLFDI
Sbjct: 123 LTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQN-RRRRRSSLFDI 162

[Close]

BLAST of CmoCh04G003840 vs. TAIR10
Match: AT5G56840.1 (AT5G56840.1 myb-like transcription factor family protein)

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-34
Identity = 88/186 (47.31%), Postives = 108/186 (58.06%), Query Frame = 1


Query: 7   RKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDE------------SMRKS 66
           R+CSHCG  GHNSRTCS++          V+LFGV+L                  +++KS
Sbjct: 3   RRCSHCGNVGHNSRTCSSY------QTRVVRLFGVHLDTTSSSPPPPPPPSILAAAIKKS 62

Query: 67  LSMGNLNIHVCNHNAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTE 126
            SM  L                AC +++ +   GYLSDGL H        +RKKG PWT 
Sbjct: 63  FSMDCLP---------------ACSSSS-SSFAGYLSDGLAHKTP-----DRKKGVPWTA 122

Query: 127 EEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD 181
           EEHRTFL GL+KLGKGDWRGIS+NFV T++PTQVASHAQKYFLR+      K+RR SLFD
Sbjct: 123 EEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRRRTSLFD 161

[Close]

BLAST of CmoCh04G003840 vs. TAIR10
Match: AT3G16350.1 (AT3G16350.1 Homeodomain-like superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33
Identity = 102/258 (39.53%), Postives = 139/258 (53.88%), Query Frame = 1


Query: 7   RKCSHCGLNGHNSRTC---------------SNFAKGNNNNNYCVKLFGVNLMDNGDESM 66
           R+CSHC  NGHNSRTC                    G + ++  VKLFGV L D     +
Sbjct: 3   RRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGS--II 62

Query: 67  RKSLSMGNLNI-----HVCNHNAAAAGNNVACYN---AAVADDG---------GYLSDGL 126
           +KS SMGNL+          H+  +  + +A  N   + ++D           GYLSD  
Sbjct: 63  KKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDDP 122

Query: 127 IHNKKRKAAL-ERKKGKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQ 186
            H         ERK+G PWTEEEHR FL GL+KLGKGDWRGIS+N+VT+RTPTQVASHAQ
Sbjct: 123 AHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQ 182

Query: 187 KYFLRKMNANDKKKRRASLFDIPE----IKNNVSQECQASSSSMRANGETSQILLP---- 222
           KYF+R   ++ ++KRR+SLFD+        ++ +QE Q  + S  +     +  LP    
Sbjct: 183 KYFIRH-TSSSRRKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPEKKSYLPSLEL 242

[Close]

BLAST of CmoCh04G003840 vs. NCBI nr
Match: gi|659107779|ref|XP_008453854.1| (PREDICTED: transcription factor MYB1R1 isoform X1 [Cucumis melo])

HSP 1 Score: 468.8 bits (1205), Expect = 8.8e-129
Identity = 267/380 (70.26%), Postives = 293/380 (77.11%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNL 60
           MVRESPRKCSHCGLNGHNSRTC NF+KGNNN  YCVKLFGVNLM+N DESMRKSLSMGNL
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCGNFSKGNNNYYYCVKLFGVNLMENRDESMRKSLSMGNL 60

Query: 61  NIHV-CNH-----NAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTE 120
           N+H  CN+     N   A NNV   NAA ADD GYLSDGLIHNK+RKAA ERKKGKPW+E
Sbjct: 61  NLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAHERKKGKPWSE 120

Query: 121 EEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD 180
           EEHRTFL GLKKLGKGDWRGISKN+VTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD
Sbjct: 121 EEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD 180

Query: 181 IPEIKNNVSQECQASSSSMRANGETSQILLPKNSS-ENQQQVSNLPTQLINRFPHLCLDT 240
           IPEIKNN S++CQASS         SQILL KN+S +NQ QV+NL TQL+NRFPHLCLDT
Sbjct: 181 IPEIKNNYSRDCQASSEL------PSQILLSKNNSLDNQPQVNNLQTQLVNRFPHLCLDT 240

Query: 241 PHFVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIRTSSP 300
           PHF+P  T    +G ++   IP+VVGVSP N   IPLV  GR S              SP
Sbjct: 241 PHFIPPQT----NGSSSPSSIPFVVGVSPKN--NIPLVNTGRSS------------RGSP 300

Query: 301 NAAAAAAALVAHPSGIPPSPRSSPQRPLMVQ--------LQASAMAASFETDALELKIGL 360
           N     AA+VAHPSGIPPSPRSSP R L++Q        + A+A +A  ++DALELKIGL
Sbjct: 301 N-----AAMVAHPSGIPPSPRSSPTRTLLMQQPAASALAMAAAASSAFDQSDALELKIGL 351

Query: 361 PQSPQAKNLSSQTSGAIRVI 366
           PQSPQ KNLSSQTSGAIRVI
Sbjct: 361 PQSPQPKNLSSQTSGAIRVI 351

[Close]

BLAST of CmoCh04G003840 vs. NCBI nr
Match: gi|778697489|ref|XP_004146936.2| (PREDICTED: myb-like protein I [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 5.0e-124
Identity = 268/383 (69.97%), Postives = 289/383 (75.46%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNY-CVKLFGVNLMDNGDESMRKSLSMGN 60
           MVRESPRKCSHCG NGHNSRTC NF+KGN+NN Y CVKLFGVNLM+N DESMRKSLSMGN
Sbjct: 1   MVRESPRKCSHCGFNGHNSRTCGNFSKGNSNNYYYCVKLFGVNLMENRDESMRKSLSMGN 60

Query: 61  LNIHVCNH----NAAAAGNNVACYNAAVA---DDGGYLSDGLIHNKKRKAALERKKGKPW 120
           LN+H CN+    N     NNV   N A A   DD GYLSDGLIHNK+RKAA ERKKGKPW
Sbjct: 61  LNLHSCNNVLDLNNTTTVNNVTGDNTAAAASTDDAGYLSDGLIHNKRRKAAHERKKGKPW 120

Query: 121 TEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 180
           +EEEHRTFL GLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL
Sbjct: 121 SEEEHRTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASL 180

Query: 181 FDIPEIKNNVSQECQASSSSMRANGE-TSQILLPKNSS-ENQQQVSNLPTQLINRFPHLC 240
           FDIPEIKNN S++C AS       GE  SQILLPKN+S +NQ QV+NL TQLINRFPHLC
Sbjct: 181 FDIPEIKNNFSRDCPAS-------GELPSQILLPKNNSPDNQSQVNNLGTQLINRFPHLC 240

Query: 241 LDTPHFVPSTTGSPASGVANLHGIPYVVGVSP-NNVPIIPLVKLGRRSSAVMAMPKSPIR 300
           LDTPHF+P  T    +G ++   IP+VVGVSP NN   IPLV +GR              
Sbjct: 241 LDTPHFIPQQT----NGSSSPSSIPFVVGVSPNNNNNNIPLVNIGR-------------S 300

Query: 301 TSSPNAAAAAAALVAHPSGIPPSPRSSPQRPLMVQLQAS--AMAASFET-----DALELK 360
             SPNAA A     AHPSGIP SPRSSP R L++Q  AS  AMAA+  T     DALELK
Sbjct: 301 RVSPNAAMA-----AHPSGIPHSPRSSPTRTLLMQPGASALAMAAAASTFDQSADALELK 354

Query: 361 IGLPQSPQAKNLSSQTSGAIRVI 366
           IGLPQSPQ  NLSSQT GAIRVI
Sbjct: 361 IGLPQSPQPNNLSSQTPGAIRVI 354

[Close]

BLAST of CmoCh04G003840 vs. NCBI nr
Match: gi|659107781|ref|XP_008453855.1| (PREDICTED: transcription factor MYB1R1 isoform X2 [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 2.5e-123
Identity = 261/380 (68.68%), Postives = 287/380 (75.53%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNNYCVKLFGVNLMDNGDESMRKSLSMGNL 60
           MVRESPRKCSHCGLNGHNSRTC NF+KGNNN  YCVKLFGVNLM+N DESMRKSLSMGNL
Sbjct: 1   MVRESPRKCSHCGLNGHNSRTCGNFSKGNNNYYYCVKLFGVNLMENRDESMRKSLSMGNL 60

Query: 61  NIHV-CNH-----NAAAAGNNVACYNAAVADDGGYLSDGLIHNKKRKAALERKKGKPWTE 120
           N+H  CN+     N   A NNV   NAA ADD GYLSDGLIHNK+RKAA ERKKGKPW+E
Sbjct: 61  NLHSSCNNVLDLNNNTTAVNNVTGDNAASADDSGYLSDGLIHNKRRKAAHERKKGKPWSE 120

Query: 121 EEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD 180
           EEHRTFL GLKKLGKGDWRGISKN+VTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD
Sbjct: 121 EEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFD 180

Query: 181 IPEIKNNVSQECQASSSSMRANGETSQILLPKNSS-ENQQQVSNLPTQLINRFPHLCLDT 240
           IPEIK         +SS +      SQILL KN+S +NQ QV+NL TQL+NRFPHLCLDT
Sbjct: 181 IPEIK---------ASSEL-----PSQILLSKNNSLDNQPQVNNLQTQLVNRFPHLCLDT 240

Query: 241 PHFVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIRTSSP 300
           PHF+P  T    +G ++   IP+VVGVSP N   IPLV  GR S              SP
Sbjct: 241 PHFIPPQT----NGSSSPSSIPFVVGVSPKN--NIPLVNTGRSS------------RGSP 300

Query: 301 NAAAAAAALVAHPSGIPPSPRSSPQRPLMVQ--------LQASAMAASFETDALELKIGL 360
           N     AA+VAHPSGIPPSPRSSP R L++Q        + A+A +A  ++DALELKIGL
Sbjct: 301 N-----AAMVAHPSGIPPSPRSSPTRTLLMQQPAASALAMAAAASSAFDQSDALELKIGL 343

Query: 361 PQSPQAKNLSSQTSGAIRVI 366
           PQSPQ KNLSSQTSGAIRVI
Sbjct: 361 PQSPQPKNLSSQTSGAIRVI 343

[Close]

BLAST of CmoCh04G003840 vs. NCBI nr
Match: gi|645257522|ref|XP_008234450.1| (PREDICTED: myb-like protein J isoform X2 [Prunus mume])

HSP 1 Score: 315.8 bits (808), Expect = 9.6e-83
Identity = 193/373 (51.74%), Postives = 243/373 (65.15%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNN-YCVKLFGVNLMDNGDESMRKSLSMGN 60
           MV+ES RKCSHCG NGHNSRTC++   G+  N   C+KLFGVN+M+  D++M+KS SMGN
Sbjct: 1   MVKESMRKCSHCGHNGHNSRTCNSNGHGHGQNKGVCLKLFGVNIMEKEDDAMKKSYSMGN 60

Query: 61  LNIHVCNHNAAAAGNNVACYNAAVAD-DGGYLSDGLIHNKKRKAALERKKGKPWTEEEHR 120
           L          AAGN     N    D D GYLSDGLIHNK+ KAA ERKKG+PWTEEEHR
Sbjct: 61  LQ---------AAGNADHNNNVVTIDHDAGYLSDGLIHNKRHKAAHERKKGRPWTEEEHR 120

Query: 121 TFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI--P 180
            FLAGLKKLGKGDWRGI++NFVTTRTPTQVASHAQKYFLR+    DK+KRR+SLFD+   
Sbjct: 121 VFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKYFLRQA-TYDKRKRRSSLFDMQFK 180

Query: 181 EIKNNVSQECQAS----SSSMRANGETSQILLPK-NSSENQQQVSNLPTQLINRFPHLCL 240
           E+ +   Q+   S    ++   + G +S++L  K N++ +    +++P+Q++NRFPHLCL
Sbjct: 181 ELSDQGHQDSPISPTRTATETSSEGSSSKVLPQKINTANSSPPKASVPSQILNRFPHLCL 240

Query: 241 DTPHFVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPKSPIRTS 300
           D+P   P+   SP   V N   +PY++G+ P NVP  P++   R S   M        T 
Sbjct: 241 DSP---PAAPVSPPCNVPNYPAVPYMMGI-PENVPYAPMMHFARPSYHYMIKTHGNFATC 300

Query: 301 SPNAAAAAAALVAHPSGIPPSPRSSPQRPLMVQLQASAMAASFETDALELKIGLPQSPQA 360
           +P        +++HPSGI PSPRS P  P M       M++  E DALELKIG PQ  Q 
Sbjct: 301 AP--------VISHPSGI-PSPRSLPSSPSMA--GRIGMSSPAEKDALELKIGQPQPSQG 348

Query: 361 KNLSSQTSGAIRV 365
            NLSS TSGAIRV
Sbjct: 361 ANLSSPTSGAIRV 348

[Close]

BLAST of CmoCh04G003840 vs. NCBI nr
Match: gi|470146824|ref|XP_004309020.1| (PREDICTED: myb-like protein J isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 315.8 bits (808), Expect = 9.6e-83
Identity = 198/379 (52.24%), Postives = 244/379 (64.38%), Query Frame = 1


Query: 1   MVRESPRKCSHCGLNGHNSRTCSNFAKGNNNNN--YCVKLFGVNLMDNGDESMRKSLSMG 60
           MV+ES RKCSHCG NGHNSRTC+    G NNNN   C+KLFGVN+M+  ++S++KS SMG
Sbjct: 1   MVKESARKCSHCGHNGHNSRTCNLLGHGVNNNNKGICLKLFGVNIMERQEDSIKKSYSMG 60

Query: 61  NLNIHVCNHNAAAAGNNVACYNAAV-ADDGGYLSDGLIHNKKRKAALERKKGKPWTEEEH 120
           NL          AAGN     N  V ADD GYLSDGLIHNKKRKAA ERKKG+PWTEEEH
Sbjct: 61  NLQ---------AAGNGDQNNNINVGADDAGYLSDGLIHNKKRKAAHERKKGRPWTEEEH 120

Query: 121 RTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKRRASLFDI-- 180
           R FLAGLKKLGKGDWRGI++NFVTTRTPTQVASHAQKYFLR+   NDK+KRR SLFD+  
Sbjct: 121 RVFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKYFLRQA-TNDKRKRRTSLFDMHF 180

Query: 181 PEIKNNVSQE----------CQASSSSMRANGETSQILLPKNSSENQQQVSNLPTQLINR 240
            E+    + +           +ASS S  + G TS++ LP+ ++      +N+P+Q++NR
Sbjct: 181 KELSEQYAHQDSPLSPTAKTAEASSCSSSSPGSTSKV-LPQITTITNSPQANMPSQVLNR 240

Query: 241 FPHLCLDTPHFVPSTTGSPASGVANLHGIPYVVGVSPNNVPIIPLVKLGRRSSAVMAMPK 300
           FPHLCLD+P  V     S  S       IPY+VG+ P  VP  P +  G  +   M    
Sbjct: 241 FPHLCLDSPPAVAQMPASSCSVPTYAPVIPYMVGM-PGTVPYTPAMHYGGPTFHYM---- 300

Query: 301 SPIRTSSPNAAAAAAALVAHPSGIPPSPRSSPQRPLMVQLQASAMAASFETDALELKIGL 360
             ++T   N  +    +++HPSGIP S RS P  PLM   + ++     + DALELKIG 
Sbjct: 301 --LKTQGGN-FSTCQPVISHPSGIPSSSRSVPSSPLMGVHRTNSSIT--KKDALELKIGQ 358

Query: 361 PQSPQAKNLSSQTSGAIRV 365
           PQ  Q  NLSS +SGAIRV
Sbjct: 361 PQPSQGANLSSSSSGAIRV 358

The following BLAST results are available for this feature:

BLAST of CmoCh04G003840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MY1R1_SOLTU	1.0e-28	42.50	Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1	[more]
DIV_ANTMA	1.7e-23	59.38	Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1	[more]
MYBJ_DICDI	1.5e-06	28.74	Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1	[more]
MYBI_DICDI	1.5e-06	31.85	Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1	[more]

BLAST of CmoCh04G003840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXN0_CUCSA	3.5e-124	69.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025050 PE=4 SV=1	[more]
W9S9L1_9ROSA	2.5e-69	48.15	Transcription factor OS=Morus notabilis GN=L484_017072 PE=4 SV=1	[more]
A0A067JSE9_JATCU	1.3e-67	48.42	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26305 PE=4 SV=1	[more]
A0A061G0P9_THECC	3.3e-58	46.81	Myb-like transcription factor family protein, putative isoform 1 OS=Theobroma ca...	[more]
A0A061G076_THECC	9.7e-58	46.26	Myb-like transcription factor family protein, putative isoform 2 OS=Theobroma ca...	[more]

BLAST of CmoCh04G003840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61620.1	1.7e-50	41.64	myb-like transcription factor family protein	[more]
AT5G47390.1	3.4e-38	50.54	myb-like transcription factor family protein	[more]
AT1G70000.1	5.8e-38	52.00	myb-like transcription factor family protein	[more]
AT5G56840.1	3.9e-34	47.31	myb-like transcription factor family protein	[more]
AT3G16350.1	2.5e-33	39.53	Homeodomain-like superfamily protein	[more]

BLAST of CmoCh04G003840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107779\|ref\|XP_008453854.1\|	8.8e-129	70.26	PREDICTED: transcription factor MYB1R1 isoform X1 [Cucumis melo]	[more]
gi\|778697489\|ref\|XP_004146936.2\|	5.0e-124	69.97	PREDICTED: myb-like protein I [Cucumis sativus]	[more]
gi\|659107781\|ref\|XP_008453855.1\|	2.5e-123	68.68	PREDICTED: transcription factor MYB1R1 isoform X2 [Cucumis melo]	[more]
gi\|645257522\|ref\|XP_008234450.1\|	9.6e-83	51.74	PREDICTED: myb-like protein J isoform X2 [Prunus mume]	[more]
gi\|470146824\|ref\|XP_004309020.1\|	9.6e-83	52.24	PREDICTED: myb-like protein J isoform X1 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR006447	Myb_dom_plants
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G003840.1	CmoCh04G003840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 110..155 score: 4.5
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 108..158 score: 6.3
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 107..159 score: 2.6
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 108..155 score: 1.6
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 106..158 score: 9.66
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 104..160 score: 19
None	No IPR available	PANTHER	PTHR12374	TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED	coord: 7..196 score: 1.2
None	No IPR available	PANTHER	PTHR12374:SF19	SUBFAMILY NOT NAMED	coord: 7..196 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G003840	Cucsa.094040	Cucumber (Gy14) v1	cgycmoB0197
CmoCh04G003840	CmaCh16G002240	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G003840	CmaCh04G003670	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G003840	Cla010705	Watermelon (97103) v1	cmowmB687
CmoCh04G003840	Csa4G025050	Cucumber (Chinese Long) v2	cmocuB700
CmoCh04G003840	MELO3C017638	Melon (DHL92) v3.5.1	cmomeB694
CmoCh04G003840	ClCG07G017060	Watermelon (Charleston Gray)	cmowcgB671
CmoCh04G003840	CSPI04G04190	Wild cucumber (PI 183967)	cmocpiB708
CmoCh04G003840	Lsi07G001240	Bottle gourd (USVL1VR-Ls)	cmolsiB690
CmoCh04G003840	Cp4.1LG14g05400	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G003840	Cp4.1LG01g03470	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G003840	MELO3C017638.2	Melon (DHL92) v3.6.1	cmomedB788
CmoCh04G003840	CsaV3_4G004280	Cucumber (Chinese Long) v3	cmocucB0828
CmoCh04G003840	Cla97C07G144100	Watermelon (97103) v2	cmowmbB749
CmoCh04G003840	Bhi01G001999	Wax gourd	cmowgoB0851
CmoCh04G003840	CsGy4G004120	Cucumber (Gy14) v2	cgybcmoB516
CmoCh04G003840	Carg16765	Silver-seed gourd	carcmoB1177
CmoCh04G003840	Carg08040	Silver-seed gourd	carcmoB0514

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G003840	CmoCh16G002430	Cucurbita moschata (Rifu)	cmocmoB286

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G003840	Watermelon (97103) v2	cmowmbB678
CmoCh04G003840	Wax gourd	cmowgoB0810
CmoCh04G003840	Cucurbita moschata (Rifu)	cmocmoB435
CmoCh04G003840	Watermelon (Charleston Gray)	cmowcgB639
CmoCh04G003840	Cucurbita pepo (Zucchini)	cmocpeB707
CmoCh04G003840	Bottle gourd (USVL1VR-Ls)	cmolsiB614
CmoCh04G003840	Silver-seed gourd	carcmoB0972
CmoCh04G003840	Cucumber (Chinese Long) v3	cmocucB0871