CmoCh16G002430 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G002430
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionmyb-like transcription factor family protein
LocationCmo_Chr16 : 1073448 .. 1074215 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTATGCAGGAAAGCCGTGGACCGAAGAGGAACATAGAACGTTTTTGGCTGGTTTGAAGAAGCTCGGGAAAGGGGATTGGAGAGGGATTTCGAAGAACTTTGTAACCACGAGAACACCGACCCAAGTAGCTAGTCATGCCCAAAAATACTTTTTGAGGAAGATGCATGCAAACGAAAAGAAGAAACGTAGAGCGAGTCTTTTTGACATGCCTGAAATCAAAGTAATATTTATTTTTTCGTGCACTTGTTTAAACCGACCTCGAGTTTTGTCGAATTTTTTGTGATTATTAATGTTATTTTTAAAAAATACAGAATAATGTTCCCCAAGATTGCCAAGCTTCTGGAGAAACGTCACTGCCAAAGAACAACAGTTCTGAGAATCAACAACAGGTGAAATAGATTAAACCTTCTTGGATAATTTTCTTTAAAAAGATTAAATTTATAACCATTCTTTGTTTTTAATCTATTTTCAGTATTTTTAGTTCTGAAAAATAAAATGGTTTTTTTTTAACTGTTTTTTTTTATTTACTGAAAATAAATTTTGTTGCAGGTCAATAATTTACCAGCACAACTTATCAATCGATTCCCTCATCTTTGTTTGGATGCTCCTCAATTTGTTCCTCCGGCAACTGGATCGGCAGCCTCGGCTGCTGCAAATTTGCATGGGATTCCTTATGTGGTAAGAACCCTTTCAGAAGCTTATTTATTTATTAAATATTTGCTTTTTTTTTTTTGTTTAGCGCCACTTAATTCTAACTAATTAA

mRNA sequence

ATGTATTATGCAGGAAAGCCGTGGACCGAAGAGGAACATAGAACGTTTTTGGCTGGTTTGAAGAAGCTCGGGAAAGGGGATTGGAGAGGGATTTCGAAGAACTTTGTAACCACGAGAACACCGACCCAAGTAGCTAGTCATGCCCAAAAATACTTTTTGAGGAAGATGCATGCAAACGAAAAGAAGAAACGTAGAGCGAGTCTTTTTGACATGCCTGAAATCAAAAATAATGTTCCCCAAGATTGCCAAGCTTCTGGAGAAACGTCACTGCCAAAGAACAACAGTTCTGAGAATCAACAACAGGTCAATAATTTACCAGCACAACTTATCAATCGATTCCCTCATCTTTGTTTGGATGCTCCTCAATTTGTTCCTCCGGCAACTGGATCGGCAGCCTCGGCTGCTGCAAATTTGCATGGGATTCCTTATGTGCGCCACTTAATTCTAACTAATTAA

Coding sequence (CDS)

ATGTATTATGCAGGAAAGCCGTGGACCGAAGAGGAACATAGAACGTTTTTGGCTGGTTTGAAGAAGCTCGGGAAAGGGGATTGGAGAGGGATTTCGAAGAACTTTGTAACCACGAGAACACCGACCCAAGTAGCTAGTCATGCCCAAAAATACTTTTTGAGGAAGATGCATGCAAACGAAAAGAAGAAACGTAGAGCGAGTCTTTTTGACATGCCTGAAATCAAAAATAATGTTCCCCAAGATTGCCAAGCTTCTGGAGAAACGTCACTGCCAAAGAACAACAGTTCTGAGAATCAACAACAGGTCAATAATTTACCAGCACAACTTATCAATCGATTCCCTCATCTTTGTTTGGATGCTCCTCAATTTGTTCCTCCGGCAACTGGATCGGCAGCCTCGGCTGCTGCAAATTTGCATGGGATTCCTTATGTGCGCCACTTAATTCTAACTAATTAA
Homology
[Close]
BLAST of CmoCh16G002430 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.0e-22
Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G PWTEEEH+ FL GL+K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ + N +++R
Sbjct: 94  GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLN-RRRR 153

Query: 65  RASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQV-----NNLPAQLINRFP 115
           R+SLFD+             +   S+      EN+Q++       LP    N FP
Sbjct: 154 RSSLFDI------------TTDSVSVMPIEEVENKQEIPVVAPATLPTTKTNAFP 195

[Close]
BLAST of CmoCh16G002430 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G PWTEEEH+ FL GLKK GKGDWR IS+NFV TRTPTQVASHAQKYF+R++ +  K KR
Sbjct: 131 GVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQL-SGGKDKR 190

Query: 65  RASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQ 102
           RAS+ D+  +  N+  +   S +   P ++   +  Q
Sbjct: 191 RASIHDITTV--NLSDNQTPSPDNKKPPSSPDHSMAQ 224

[Close]
BLAST of CmoCh16G002430 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-10
Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 1 

Query: 8   WTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRAS 67
           WT+EEH  FL G++  GKG W+ I++ FV TRTPTQ+ SHAQKY+LR+    ++ K + S
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQ---KQETKNKRS 438

Query: 68  LFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQ 102
           + D+  +++ +  +   S + ++ KN   + +++
Sbjct: 439 IHDL-SLQDLIDDNLNNSNKNNVDKNKQDDKEKK 467

[Close]
BLAST of CmoCh16G002430 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 39/100 (39.00%), Postives = 51/100 (51.00%), Query Frame = 1 

Query: 8   WTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFL-------RKMHANE 67
           WT EEH  F+  L K G  D + IS+ +V+TR PTQV +HAQKYFL       RK+ + E
Sbjct: 175 WTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRERGRKLESKE 234

Query: 68  KKKRRASLFD--MPEIKNNVPQDCQASGETSLPKNNSSEN 99
                A   D  + E  N+     Q S  ++ P  NS  N
Sbjct: 235 SINGGADKDDDWLREEYNDEGSPTQYSSCSNSPTTNSVAN 273

[Close]
BLAST of CmoCh16G002430 vs. Swiss-Prot
Match: MYBH_DICDI (Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 8.7e-06
Identity = 29/98 (29.59%), Postives = 50/98 (51.02%), Query Frame = 1 

Query: 7   PWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKRRA 66
           PW+ EEH  FL  ++K G+G+W+ IS   + +R   Q+ +HA+ YF +    N    ++ 
Sbjct: 231 PWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKKT 290

Query: 67  SLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN 105
            +    E++NN   + Q +       NN++ N    NN
Sbjct: 291 II----EVENNNNYNDQNNNNEQNNNNNNNNNNNNNNN 323

[Close]
BLAST of CmoCh16G002430 vs. TrEMBL
Match: A0A0A0KXN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025050 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-52
Identity = 107/144 (74.31%), Postives = 119/144 (82.64%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPW+EEEHRTFL GLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKR
Sbjct: 117 GKPWSEEEHRTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKR 176

Query: 65  RASLFDMPEIKNNVPQDCQASGETS----LPKNNSSENQQQVNNLPAQLINRFPHLCLDA 124
           RASLFD+PEIKNN  +DC ASGE      LPKNNS +NQ QVNNL  QLINRFPHLCLD 
Sbjct: 177 RASLFDIPEIKNNFSRDCPASGELPSQILLPKNNSPDNQSQVNNLGTQLINRFPHLCLDT 236

Query: 125 PQFVPPATGSAASAAANLHGIPYV 145
           P F+P  T  ++S ++    IP+V
Sbjct: 237 PHFIPQQTNGSSSPSS----IPFV 256

[Close]
BLAST of CmoCh16G002430 vs. TrEMBL
Match: A0A067JSE9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26305 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32
Identity = 88/157 (56.05%), Postives = 105/157 (66.88%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY+LR+  A + KKR
Sbjct: 91  GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYYLRQASA-DIKKR 150

Query: 65  RASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNN---LP--------------A 124
           R+SLFDM  +K   P+   +     LP N+SS+ +Q  ++   LP              A
Sbjct: 151 RSSLFDM-TLKE--PKVLTSQERPILPSNSSSQVKQASSSSLALPLRTTTDIPARAITSA 210

Query: 125 QLINRFPHLCLDAPQFVPPATGSAASAAANLHGIPYV 145
           Q++NRFPHLCLD P   P      A++  N  GIPY+
Sbjct: 211 QILNRFPHLCLDTPAIGP---AYLATSVPNYTGIPYM 240

[Close]
BLAST of CmoCh16G002430 vs. TrEMBL
Match: W9S9L1_9ROSA (Transcription factor OS=Morus notabilis GN=L484_017072 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-31
Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPWTEEEHRTFLAG+ KLGKGDWRGIS  FVTTRTPTQVASHAQKYF+RK    ++KKR
Sbjct: 115 GKPWTEEEHRTFLAGMNKLGKGDWRGISSKFVTTRTPTQVASHAQKYFIRKQAPKDRKKR 174

Query: 65  RASLFDMPEIKNN---VPQDCQASG---ETSLPKNNSSENQQQVNNLPAQLINRFPHLCL 120
           R+SLFDMP  +++    PQ  Q S     T+   +  S +Q    N P++++NRFP LCL
Sbjct: 175 RSSLFDMPFTQSDDVVPPQGHQVSSMIKPTAETSSRPSRSQGLAENNPSEILNRFPQLCL 234

[Close]
BLAST of CmoCh16G002430 vs. TrEMBL
Match: B9R9Z4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1502380 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.3e-31
Identity = 87/153 (56.86%), Postives = 103/153 (67.32%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPWTEEEHR FL GL KLGKGDWRGISKNFVTTRTPTQVASHAQKYFLR+  A +KKKR
Sbjct: 94  GKPWTEEEHRIFLEGLDKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQ-SAADKKKR 153

Query: 65  RASLFDM---PEIKNNVPQD---------CQASGETSLPKNNSSENQQQVNNLPAQLINR 124
           R+SLFDM     +  + PQ+          QA+  ++LP   ++E Q  V    AQ+IN+
Sbjct: 154 RSSLFDMTLRESVLASQPQELSIFPASTSSQATTSSALPLKKTTEVQSNVIT-RAQVINK 213

Query: 125 FPHLCLDAPQFVPPATGSAASAAANLH-GIPYV 145
           FPHL LD P  VP A  S    A + + GIPY+
Sbjct: 214 FPHLFLDNP--VPMANPSVVPIAVSSYAGIPYM 242

[Close]
BLAST of CmoCh16G002430 vs. TrEMBL
Match: A0A061G0P9_THECC (Myb-like transcription factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_014838 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.9e-30
Identity = 83/146 (56.85%), Postives = 95/146 (65.07%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPWTEEEHR FLAGL+KLGKGDWRGISK FVTTRTPTQVASHAQKYFLR+   N+KKKR
Sbjct: 114 GKPWTEEEHRIFLAGLRKLGKGDWRGISKKFVTTRTPTQVASHAQKYFLRQA-GNDKKKR 173

Query: 65  RASLFDM--PEIKNNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLINRFPHLCLDAPQ 124
           R SLFDM   E+++N      AS   S  +  + ++  QV   P+ + NRFPHLCLD   
Sbjct: 174 RPSLFDMAFQELESN------ASPPGSPAEQTTRDSSDQV-KAPSPIANRFPHLCLDD-- 233

Query: 125 FVPPATGSAASAAANLHGIPYVRHLI 149
              P T   AS     H  P   H I
Sbjct: 234 --RPVTSLTAS-----HSFPTYYHRI 242

[Close]
BLAST of CmoCh16G002430 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27
Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G PWTEEEHR FL GL+KLGKGDWRGIS+N+VTTRTPTQVASHAQKYF+R+ + + ++KR
Sbjct: 95  GTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVS-RRKR 154

Query: 65  RASLFDM-PEIKNNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLINRFPHL------- 124
           R+SLFDM P+   ++P D Q   E ++P     +    ++   A      P +       
Sbjct: 155 RSSLFDMVPDEVGDIPMDLQEPEEDNIPVETEMQGADSIHQTLAPSSLHAPSILEIEECE 214

Query: 125 CLDAPQFV---PPATGSAASAAANL 139
            +D+       P AT +AAS+++ L
Sbjct: 215 SMDSTNSTTGEPTATAAAASSSSRL 238

[Close]
BLAST of CmoCh16G002430 vs. TAIR10
Match: AT5G61620.1 (AT5G61620.1 myb-like transcription factor family protein)

HSP 1 Score: 119.0 bits (297), Expect = 2.5e-27
Identity = 64/118 (54.24%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPWTEEEHR FL GL KLGKGDWRGI+K+FV+TRTPTQVASHAQKYF+R ++ N+K+KR
Sbjct: 107 GKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIR-LNVNDKRKR 166

Query: 65  RASLFDMP-EIKNNVPQDCQASGETSLPKNNSSENQQQV--NNLPAQLINRFPHLCLD 120
           RASLFD+  E +    ++ Q +   + PK   +  QQ V   +   ++ NRF +L ++
Sbjct: 167 RASLFDISLEDQKEKERNSQDASTKTPPKQPITGIQQPVVQGHTQTEISNRFQNLSME 223

[Close]
BLAST of CmoCh16G002430 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.6e-24
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G PWTEEEHR FL GL K+GKGDWRGIS+NFV TRTPTQVASHAQKYFLR+ + N +++R
Sbjct: 97  GTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQN-RRRR 156

Query: 65  RASLFDM 72
           R+SLFD+
Sbjct: 157 RSSLFDI 162

[Close]
BLAST of CmoCh16G002430 vs. TAIR10
Match: AT5G56840.1 (AT5G56840.1 myb-like transcription factor family protein)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-24
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G PWT EEHRTFL GL+KLGKGDWRGIS+NFV T++PTQVASHAQKYFLR+      K+R
Sbjct: 90  GVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRR 149

Query: 65  RASLFDMPEIKN 77
           R SLFDM    N
Sbjct: 150 RTSLFDMVSAGN 161

[Close]
BLAST of CmoCh16G002430 vs. TAIR10
Match: AT1G19000.1 (AT1G19000.1 Homeodomain-like superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-24
Identity = 65/152 (42.76%), Postives = 91/152 (59.87%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G PWTE EH+ FL GL+K+GKGDW+GIS+NFV +RTPTQVASHAQKYFLR+ + N +++R
Sbjct: 101 GVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLN-RRRR 160

Query: 65  RASLFDM-PEIKNNVPQDCQASGETS-LPKNNSSENQQQV---NNLPAQLINRFPHLCLD 124
           R+SLFD+  E    +  +   + E S LP+ N S  QQ +    ++P +  N      L+
Sbjct: 161 RSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQAMQVFTDVPTKTENAPETFHLN 220

Query: 125 APQFVPPATGSAASAAANLHGIPYVRHLILTN 152
            P  VP    +  +   N    P   +L L +
Sbjct: 221 DPYLVPVTFQAKPTFNLNTDAAPLSLNLCLAS 251

[Close]
BLAST of CmoCh16G002430 vs. NCBI nr
Match: gi|778697489|ref|XP_004146936.2| (PREDICTED: myb-like protein I [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 107/144 (74.31%), Postives = 119/144 (82.64%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPW+EEEHRTFL GLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKM+AN+KKKR
Sbjct: 117 GKPWSEEEHRTFLIGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMNANDKKKR 176

Query: 65  RASLFDMPEIKNNVPQDCQASGETS----LPKNNSSENQQQVNNLPAQLINRFPHLCLDA 124
           RASLFD+PEIKNN  +DC ASGE      LPKNNS +NQ QVNNL  QLINRFPHLCLD 
Sbjct: 177 RASLFDIPEIKNNFSRDCPASGELPSQILLPKNNSPDNQSQVNNLGTQLINRFPHLCLDT 236

Query: 125 PQFVPPATGSAASAAANLHGIPYV 145
           P F+P  T  ++S ++    IP+V
Sbjct: 237 PHFIPQQTNGSSSPSS----IPFV 256

[Close]
BLAST of CmoCh16G002430 vs. NCBI nr
Match: gi|659107779|ref|XP_008453854.1| (PREDICTED: transcription factor MYB1R1 isoform X1 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 6.2e-52
Identity = 105/144 (72.92%), Postives = 119/144 (82.64%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPW+EEEHRTFL GLKKLGKGDWRGISKN+VTTRTPTQVASHAQKYFLRKM+AN+KKKR
Sbjct: 115 GKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKR 174

Query: 65  RASLFDMPEIKNNVPQDCQASGETS----LPKNNSSENQQQVNNLPAQLINRFPHLCLDA 124
           RASLFD+PEIKNN  +DCQAS E      L KNNS +NQ QVNNL  QL+NRFPHLCLD 
Sbjct: 175 RASLFDIPEIKNNYSRDCQASSELPSQILLSKNNSLDNQPQVNNLQTQLVNRFPHLCLDT 234

Query: 125 PQFVPPATGSAASAAANLHGIPYV 145
           P F+PP T  ++S ++    IP+V
Sbjct: 235 PHFIPPQTNGSSSPSS----IPFV 254

[Close]
BLAST of CmoCh16G002430 vs. NCBI nr
Match: gi|659107781|ref|XP_008453855.1| (PREDICTED: transcription factor MYB1R1 isoform X2 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 7.8e-47
Identity = 97/140 (69.29%), Postives = 112/140 (80.00%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           GKPW+EEEHRTFL GLKKLGKGDWRGISKN+VTTRTPTQVASHAQKYFLRKM+AN+KKKR
Sbjct: 115 GKPWSEEEHRTFLIGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKYFLRKMNANDKKKR 174

Query: 65  RASLFDMPEIKNNVPQDCQASGETSLPKNNSSENQQQVNNLPAQLINRFPHLCLDAPQFV 124
           RASLFD+PEIK       +   +  L KNNS +NQ QVNNL  QL+NRFPHLCLD P F+
Sbjct: 175 RASLFDIPEIK----ASSELPSQILLSKNNSLDNQPQVNNLQTQLVNRFPHLCLDTPHFI 234

Query: 125 PPATGSAASAAANLHGIPYV 145
           PP T  ++S ++    IP+V
Sbjct: 235 PPQTNGSSSPSS----IPFV 246

[Close]
BLAST of CmoCh16G002430 vs. NCBI nr
Match: gi|657969290|ref|XP_008376361.1| (PREDICTED: myb-like protein J isoform X1 [Malus domestica])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 84/143 (58.74%), Postives = 101/143 (70.63%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G+PWTEEEHR FLAGLKKLGKGDWRGI++NFVTTRTPTQVASHAQKYFLR+   N+K+KR
Sbjct: 98  GRPWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKYFLRQA-TNDKRKR 157

Query: 65  RASLFDM--PEIKNNVPQDC-------------QASGETSLP-KNNSSENQQQVNNLPAQ 124
           R+SLFDM   E+ +  PQD              QAS   ++P K N++ N    +N+P Q
Sbjct: 158 RSSLFDMHFKELSDQGPQDSSISPTKSADETSPQASSSKTMPLKINTANNSPPASNVPTQ 217

Query: 125 LINRFPHLCLD---APQFVPPAT 129
           ++NRFPHLCLD   AP F P  T
Sbjct: 218 ILNRFPHLCLDSPPAPPFSPTCT 239

[Close]
BLAST of CmoCh16G002430 vs. NCBI nr
Match: gi|657969292|ref|XP_008376363.1| (PREDICTED: myb-like protein J isoform X2 [Malus domestica])

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34
Identity = 83/141 (58.87%), Postives = 100/141 (70.92%), Query Frame = 1 

Query: 5   GKPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRKMHANEKKKR 64
           G+PWTEEEHR FLAGLKKLGKGDWRGI++NFVTTRTPTQVASHAQKYFLR+   N+K+KR
Sbjct: 98  GRPWTEEEHRVFLAGLKKLGKGDWRGIARNFVTTRTPTQVASHAQKYFLRQA-TNDKRKR 157

Query: 65  RASLFDMPEIKNNVPQDC-------------QASGETSLP-KNNSSENQQQVNNLPAQLI 124
           R+SLFDM   + + PQD              QAS   ++P K N++ N    +N+P Q++
Sbjct: 158 RSSLFDMHFKELSGPQDSSISPTKSADETSPQASSSKTMPLKINTANNSPPASNVPTQIL 217

Query: 125 NRFPHLCLD---APQFVPPAT 129
           NRFPHLCLD   AP F P  T
Sbjct: 218 NRFPHLCLDSPPAPPFSPTCT 237

The following BLAST results are available for this feature:
BLAST of CmoCh16G002430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MY1R1_SOLTU3.0e-2250.43Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
DIV_ANTMA1.3e-2053.61Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MYBJ_DICDI4.5e-1037.23Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1[more]
MYBI_DICDI1.8e-0639.00Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1[more]
MYBH_DICDI8.7e-0629.59Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1[more]
BLAST of CmoCh16G002430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXN0_CUCSA1.1e-5274.31Uncharacterized protein OS=Cucumis sativus GN=Csa_4G025050 PE=4 SV=1[more]
A0A067JSE9_JATCU1.3e-3256.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26305 PE=4 SV=1[more]
W9S9L1_9ROSA3.2e-3160.33Transcription factor OS=Morus notabilis GN=L484_017072 PE=4 SV=1[more]
B9R9Z4_RICCO9.3e-3156.86Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1502380 PE=4 SV=1[more]
A0A061G0P9_THECC7.9e-3056.85Myb-like transcription factor family protein, putative isoform 1 OS=Theobroma ca... [more]
BLAST of CmoCh16G002430 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47390.11.5e-2746.21 myb-like transcription factor family protein[more]
AT5G61620.12.5e-2754.24 myb-like transcription factor family protein[more]
AT1G70000.12.6e-2474.63 myb-like transcription factor family protein[more]
AT5G56840.13.4e-2470.83 myb-like transcription factor family protein[more]
AT1G19000.14.4e-2442.76 Homeodomain-like superfamily protein[more]
BLAST of CmoCh16G002430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778697489|ref|XP_004146936.2|1.6e-5274.31PREDICTED: myb-like protein I [Cucumis sativus][more]
gi|659107779|ref|XP_008453854.1|6.2e-5272.92PREDICTED: transcription factor MYB1R1 isoform X1 [Cucumis melo][more]
gi|659107781|ref|XP_008453855.1|7.8e-4769.29PREDICTED: transcription factor MYB1R1 isoform X2 [Cucumis melo][more]
gi|657969290|ref|XP_008376361.1|1.2e-3458.74PREDICTED: myb-like protein J isoform X1 [Malus domestica][more]
gi|657969292|ref|XP_008376363.1|2.6e-3458.87PREDICTED: myb-like protein J isoform X2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G002430.1CmoCh16G002430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 6..51
score: 1.0
IPR001005SANT/Myb domainSMARTSM00717santcoord: 4..54
score: 2.7
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 7..55
score: 2.1
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 6..51
score: 7.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 6..54
score: 2.3
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 1..56
score: 18
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 7..71
score: 2.0
NoneNo IPR availablePANTHERPTHR12374:SF19SUBFAMILY NOT NAMEDcoord: 7..71
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G002430Cucsa.094040Cucumber (Gy14) v1cgycmoB0189
CmoCh16G002430CmaCh16G002240Cucurbita maxima (Rimu)cmacmoB322
CmoCh16G002430CmaCh04G003670Cucurbita maxima (Rimu)cmacmoB701
CmoCh16G002430Cla010705Watermelon (97103) v1cmowmB307
CmoCh16G002430Csa4G025050Cucumber (Chinese Long) v2cmocuB321
CmoCh16G002430MELO3C017638Melon (DHL92) v3.5.1cmomeB299
CmoCh16G002430ClCG07G017060Watermelon (Charleston Gray)cmowcgB295
CmoCh16G002430CSPI04G04190Wild cucumber (PI 183967)cmocpiB328
CmoCh16G002430Lsi07G001240Bottle gourd (USVL1VR-Ls)cmolsiB312
CmoCh16G002430Cp4.1LG14g05400Cucurbita pepo (Zucchini)cmocpeB307
CmoCh16G002430Cp4.1LG01g03470Cucurbita pepo (Zucchini)cmocpeB311
CmoCh16G002430Bhi01G001999Wax gourdcmowgoB0438
CmoCh16G002430CsGy4G004120Cucumber (Gy14) v2cgybcmoB464
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh16G002430CmoCh04G003840Cucurbita moschata (Rifu)cmocmoB286
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G002430Cucumber (Chinese Long) v3cmocucB0384
CmoCh16G002430Cucumber (Chinese Long) v3cmocucB0402
CmoCh16G002430Watermelon (97103) v2cmowmbB312
CmoCh16G002430Watermelon (97103) v2cmowmbB337
CmoCh16G002430Cucurbita moschata (Rifu)cmocmoB280
CmoCh16G002430Wild cucumber (PI 183967)cmocpiB341
CmoCh16G002430Cucumber (Chinese Long) v2cmocuB333
CmoCh16G002430Watermelon (Charleston Gray)cmowcgB287
CmoCh16G002430Cucurbita pepo (Zucchini)cmocpeB325
CmoCh16G002430Bottle gourd (USVL1VR-Ls)cmolsiB289
CmoCh16G002430Cucumber (Gy14) v2cgybcmoB598
CmoCh16G002430Melon (DHL92) v3.6.1cmomedB343
CmoCh16G002430Silver-seed gourdcarcmoB0509
CmoCh16G002430Silver-seed gourdcarcmoB0967
CmoCh16G002430Silver-seed gourdcarcmoB1175