MELO3C015855 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015855
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	chr1 : 29766858 .. 29768335 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATTTCAAATTTGAGTCAACATACTCTAAGAAACCCCTTCGCTAGTTTGCTAAAGCTAGCCGTCGGCAACCCAATAACCACTGATCGCTCCCTCGTCGTGGGTAATGTTCTCCACTCCCCATTCACTCATCTCATATCTCCGCCGCATCAAATCTCCTCACCCCTCTTTCCTATCCCAGGAAATCATCGTTCAGTTCAGACCCATTTCGAGTTTGAAGGTAGTTTGGCGCAAAGATTACAGATTGGACGAAGCCATCGAGAACGACAAGCGGTACAAGCTATGCGCGCGCGTTGTAAGAGAAGTTCTCAACGAACCAGGGCAGGTAATTCCTCTTCGATATCTTGAAAAACGGCGAGAGAGATTGCGCCTCAATGTGTCAGTCAAGGCGTTTTTGGGTTTCAATCCAGGTTTGTTGGATACTTATTATGATAGAATCAAACCTAAATCTGAACCCGTTTTGTTCTTACGCGCGAGTGATCGACTTAGGGGGTTTCTTGAAGAAGAGAAGAGGATTATGATGGAAAATGAAGAGTTGATCGTTTCGAAATTGTGTAAGTTATTGATGATGTCGAAGGATAAAATGCTTAGTGTTGATAAATTACTGCATGTTAAGAGGGATTTCGGGTTTCCGAACGATTTTTTAGTCAATTTAGTGCCGAAATACCCTGAATATTTTCAGATTGTTGGGAGTCCGGGAGAGGGAAAATCGTTTCTCCAATTGGTTACTCGAAACCCTGATTTTGCTAAATCAGTGATTGAGAGAAGAGCTGAGGATGAATCCAGATCGACTGGCATTCGTATGCGGCCTAATTTCGACTACAAGCTTCCTCCTGGATTCATTTTGAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAATTAGATTACATATCGCCATACGAGGATGTGTCCTATTTGGAACAATCTTCACCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTGTCACTTTCATTGCTCAAGAGGATTCCAGTACCAATATTGGGGAAATTTGGTGATGAGTACAGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTCTATTTGTCTTTGAAAGGTGGGATTGAAACTGCGATGCTTCGAGAGGCATATCAAGGTGACCAGTTGATTGATTGTGACCCATTGCTTGAAATAAAAAATAAGTTCGTGGAGTTGTTGGAACAAGGATGGAGGGAAAGAGCTGAGCAGCGAAGGGAACAGGCAAATGAGCGCAGGAAGGACATGGAATTCATGGGTGCAAGGGCTGTTCACTTGAAGGACTGAGTTTTGCGATGAGGATGACTGACCGTGCCGGGTAAATAGATTTTGGGAAAATCTTCTTTTCTAACCATATTTATGTCTTAAGTTTTAATTTGGTCGAGTCGAATTATTAACTTGAATAAGTTGCGAAATTAATGTTTTTTTTAGTTCATATGTTGTATTATACT

mRNA sequence

ACATTTCAAATTTGAGTCAACATACTCTAAGAAACCCCTTCGCTAGTTTGCTAAAGCTAGCCGTCGGCAACCCAATAACCACTGATCGCTCCCTCGTCGTGGGTAATGTTCTCCACTCCCCATTCACTCATCTCATATCTCCGCCGCATCAAATCTCCTCACCCCTCTTTCCTATCCCAGGAAATCATCGTTCAGTTCAGACCCATTTCGAGTTTGAAGGTAGTTTGGCGCAAAGATTACAGATTGGACGAAGCCATCGAGAACGACAAGCGGTACAAGCTATGCGCGCGCGTTGTAAGAGAAGTTCTCAACGAACCAGGGCAGGTAATTCCTCTTCGATATCTTGAAAAACGGCGAGAGAGATTGCGCCTCAATGTGTCAGTCAAGGCGTTTTTGGGTTTCAATCCAGGTTTGTTGGATACTTATTATGATAGAATCAAACCTAAATCTGAACCCGTTTTGTTCTTACGCGCGAGTGATCGACTTAGGGGGTTTCTTGAAGAAGAGAAGAGGATTATGATGGAAAATGAAGAGTTGATCGTTTCGAAATTGTGTAAGTTATTGATGATGTCGAAGGATAAAATGCTTAGTGTTGATAAATTACTGCATGTTAAGAGGGATTTCGGGTTTCCGAACGATTTTTTAGTCAATTTAGTGCCGAAATACCCTGAATATTTTCAGATTGTTGGGAGTCCGGGAGAGGGAAAATCGTTTCTCCAATTGGTTACTCGAAACCCTGATTTTGCTAAATCAGTGATTGAGAGAAGAGCTGAGGATGAATCCAGATCGACTGGCATTCGTATGCGGCCTAATTTCGACTACAAGCTTCCTCCTGGATTCATTTTGAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAATTAGATTACATATCGCCATACGAGGATGTGTCCTATTTGGAACAATCTTCACCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTGTCACTTTCATTGCTCAAGAGGATTCCAGTACCAATATTGGGGAAATTTGGTGATGAGTACAGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTCTATTTGTCTTTGAAAGGTGGGATTGAAACTGCGATGCTTCGAGAGGCATATCAAGGTGACCAGTTGATTGATTGTGACCCATTGCTTGAAATAAAAAATAAGTTCGTGGAGTTGTTGGAACAAGGATGGAGGGAAAGAGCTGAGCAGCGAAGGGAACAGGCAAATGAGCGCAGGAAGGACATGGAATTCATGGGTGCAAGGGCTGTTCACTTGAAGGACTGAGTTTTGCGATGAGGATGACTGACCGTGCCGGGTAAATAGATTTTGGGAAAATCTTCTTTTCTAACCATATTTATGTCTTAAGTTTTAATTTGGTCGAGTCGAATTATTAACTTGAATAAGTTGCGAAATTAATGTTTTTTTTAGTTCATATGTTGTATTATACT

Coding sequence (CDS)

ATGTTCTCCACTCCCCATTCACTCATCTCATATCTCCGCCGCATCAAATCTCCTCACCCCTCTTTCCTATCCCAGGAAATCATCGTTCAGTTCAGACCCATTTCGAGTTTGAAGGTAGTTTGGCGCAAAGATTACAGATTGGACGAAGCCATCGAGAACGACAAGCGGTACAAGCTATGCGCGCGCGTTGTAAGAGAAGTTCTCAACGAACCAGGGCAGGTAATTCCTCTTCGATATCTTGAAAAACGGCGAGAGAGATTGCGCCTCAATGTGTCAGTCAAGGCGTTTTTGGGTTTCAATCCAGGTTTGTTGGATACTTATTATGATAGAATCAAACCTAAATCTGAACCCGTTTTGTTCTTACGCGCGAGTGATCGACTTAGGGGGTTTCTTGAAGAAGAGAAGAGGATTATGATGGAAAATGAAGAGTTGATCGTTTCGAAATTGTGTAAGTTATTGATGATGTCGAAGGATAAAATGCTTAGTGTTGATAAATTACTGCATGTTAAGAGGGATTTCGGGTTTCCGAACGATTTTTTAGTCAATTTAGTGCCGAAATACCCTGAATATTTTCAGATTGTTGGGAGTCCGGGAGAGGGAAAATCGTTTCTCCAATTGGTTACTCGAAACCCTGATTTTGCTAAATCAGTGATTGAGAGAAGAGCTGAGGATGAATCCAGATCGACTGGCATTCGTATGCGGCCTAATTTCGACTACAAGCTTCCTCCTGGATTCATTTTGAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAATTAGATTACATATCGCCATACGAGGATGTGTCCTATTTGGAACAATCTTCACCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTGTCACTTTCATTGCTCAAGAGGATTCCAGTACCAATATTGGGGAAATTTGGTGATGAGTACAGGTTTTCAAATGCATTTTCCAGTGTGTTCACAAGGCATTCTGGGATATTCTATTTGTCTTTGAAAGGTGGGATTGAAACTGCGATGCTTCGAGAGGCATATCAAGGTGACCAGTTGATTGATTGTGACCCATTGCTTGAAATAAAAAATAAGTTCGTGGAGTTGTTGGAACAAGGATGGAGGGAAAGAGCTGAGCAGCGAAGGGAACAGGCAAATGAGCGCAGGAAGGACATGGAATTCATGGGTGCAAGGGCTGTTCACTTGAAGGACTGA

Protein sequence

MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLKD*

Homology

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BLAST of MELO3C015855 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.9e-32
Identity = 92/339 (27.14%), Postives = 167/339 (49.26%), Query Frame = 1


Query: 43  KDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVK---AFLGF 102
           +D+  D  +E +K+ +   +    +L++P   I +  L+    RL L        AFL  
Sbjct: 48  RDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLK 107

Query: 103 NPGLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDK 162
            P + + Y   +    + +L+ R + +    +  E   +++     V++L KL+MMS   
Sbjct: 108 FPHVFEIYEHPV----QRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTG 167

Query: 163 MLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIE 222
            + ++ +   + +FG P DF  +++ K+P++F+++        ++++V ++P+ +   IE
Sbjct: 168 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 227

Query: 223 RRAEDESRSTGIR---MRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQS 282
           R  E E R+ GI    +R +F    PPGF + K  R  V  W  L Y SPYED+S  +  
Sbjct: 228 RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 287

Query: 283 SPE----MEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGIFYLS 342
           S E    +EKR+V   HELLSL++ K+I +  +  F +             +H GIFY+S
Sbjct: 288 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 347

Query: 343 LKGG---IETAMLREAYQGDQLIDCDPLLEIKNKFVELL 369
            +G    + T  LRE Y+  +L++ + +   + +  EL+
Sbjct: 348 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

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BLAST of MELO3C015855 vs. TrEMBL
Match: A0A0A0K559_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G392430 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 1.6e-215
Identity = 381/401 (95.01%), Postives = 388/401 (96.76%), Query Frame = 1


Query: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
           MFSTP+SLISYLR IKS  P FLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC
Sbjct: 1   MFSTPNSLISYLRGIKSHCPCFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGL DTYYDRIKPKSEPVLF
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
           LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKL+HVKRDFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLVHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
           VNLVPKYPEYFQIVG PGEGKSFLQLV+RNPDFAKSVIERRAEDES STGIRMRPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGCPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYEDVS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
           PVPILGKFG EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+G QLIDCDPLLEI
Sbjct: 301 PVPILGKFGGEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYEGGQLIDCDPLLEI 360

Query: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLK 402
           KNKFVELLEQGWRERAEQRR+QANE RKDMEFM ARAVHLK
Sbjct: 361 KNKFVELLEQGWRERAEQRRQQANELRKDMEFMCARAVHLK 401

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BLAST of MELO3C015855 vs. TrEMBL
Match: A0A061DV66_THECC (Ubiquitin carboxyl-terminal hydrolase family protein isoform 1 OS=Theobroma cacao GN=TCM_002907 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 3.7e-167
Identity = 299/399 (74.94%), Postives = 341/399 (85.46%), Query Frame = 1


Query: 4   TPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARV 63
           T  S ISYL   K    SFL+ +   Q +PISSLKV+WRKD +LD+AIENDKRYKLCARV
Sbjct: 7   TISSSISYL---KFDFDSFLNPKFTFQIKPISSLKVIWRKDQKLDQAIENDKRYKLCARV 66

Query: 64  VREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRA 123
           V+EVLNEPGQ IPLRYL+KRRERLRLNV VK F+  NPGL DTYYDRI+PKSE V FLR 
Sbjct: 67  VKEVLNEPGQAIPLRYLDKRRERLRLNVKVKTFINNNPGLFDTYYDRIRPKSERVPFLRP 126

Query: 124 SDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNL 183
           SD+LR FLEEEKRI  ENEEL+VSKLCKLLMMS+ K++SVDKL+HVKR+FG PNDFLV+L
Sbjct: 127 SDKLRNFLEEEKRIYSENEELVVSKLCKLLMMSRYKVISVDKLVHVKREFGLPNDFLVSL 186

Query: 184 VPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPP 243
           VPKY  YF++ GSPGEG+SFL+LV  NP+FAKSVIE+RAE+ESR TGIR+RPNF+YKLP 
Sbjct: 187 VPKYSNYFRLTGSPGEGQSFLELVEWNPEFAKSVIEQRAEEESRLTGIRVRPNFNYKLPA 246

Query: 244 GFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVP 303
           GF LRKEMREWVRDWLELDYISPYEDVS+L+Q+S EMEKR VGVFHELLSLSL KR+P P
Sbjct: 247 GFFLRKEMREWVRDWLELDYISPYEDVSHLDQASREMEKRMVGVFHELLSLSLFKRVPAP 306

Query: 304 ILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNK 363
           ILGKF D+YRFSNAFSSVFTRHSGIFY+SLKGGI+TA+LREAY+ DQLID DPLLEIK+K
Sbjct: 307 ILGKFTDDYRFSNAFSSVFTRHSGIFYMSLKGGIKTAVLREAYKDDQLIDKDPLLEIKDK 366

Query: 364 FVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLKD 403
           FVELLE+GW+ERAE  R +  + +KDME M  R   L D
Sbjct: 367 FVELLEEGWQERAELLRLRREQVKKDMEMMAMRNEGLND 402

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BLAST of MELO3C015855 vs. TrEMBL
Match: M5W646_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006704mg PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 8.5e-164
Identity = 291/393 (74.05%), Postives = 335/393 (85.24%), Query Frame = 1


Query: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
           M     ++ SYL    +   S  + E  +Q R ISSLKVVWRKD +LD+AI+NDK+YKLC
Sbjct: 1   MLPKTRTISSYLHNHTTIFTSHTNPETHLQVRFISSLKVVWRKDRKLDQAIKNDKQYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPG+ IPLRYLEKRRERLRLN+ VK FL  NPGL D YYDRIKPK+EPV F
Sbjct: 61  ARVVKEVLNEPGKAIPLRYLEKRRERLRLNIKVKTFLSRNPGLFDIYYDRIKPKTEPVKF 120

Query: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
           LR SDRL+  LEE   I+MENE LIVSKLCKLLMMSKDK+LS DKL+HVKR+FGFPNDF+
Sbjct: 121 LRISDRLQQILEEGNGIVMENEPLIVSKLCKLLMMSKDKVLSADKLVHVKREFGFPNDFM 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
           VNLVPKYP+YF+I+G PGE KSFL+LV+ NP+FAKSVIERRAE+ES  TGIR+RPNF YK
Sbjct: 181 VNLVPKYPQYFRILGFPGEEKSFLELVSWNPEFAKSVIERRAEEESNLTGIRVRPNFYYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
           LP GF L++EMREWVRDW+ELDYISPY+DVS L+Q+S EMEKRTVGVFHELLSLS+ KRI
Sbjct: 241 LPSGFFLKREMREWVRDWMELDYISPYKDVSQLDQASQEMEKRTVGVFHELLSLSIFKRI 300

Query: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
           PVPILGKF DEYRFSNAFS+VFTRHSGIFYLSLKGGI+TA+LREAY+ D++IDCDPLLEI
Sbjct: 301 PVPILGKFSDEYRFSNAFSNVFTRHSGIFYLSLKGGIKTAVLREAYKDDKMIDCDPLLEI 360

Query: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFM 394
           K+KFVELLE+GWRER EQ + Q  E +KD E M
Sbjct: 361 KDKFVELLEEGWRERKEQLQLQMEEVKKDKERM 393

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BLAST of MELO3C015855 vs. TrEMBL
Match: A0A0D2PTK3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G187800 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 8.5e-164
Identity = 290/393 (73.79%), Postives = 337/393 (85.75%), Query Frame = 1


Query: 10  SYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVVREVLN 69
           S +  +K    SFL+ +  +QF PISSLKVVWRKD+ LD+AIENDKRYKLCARVV+EVL 
Sbjct: 15  SSISNLKLNFKSFLNPKFTLQFNPISSLKVVWRKDWTLDKAIENDKRYKLCARVVKEVLK 74

Query: 70  EPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRASDRLRG 129
           EPGQ IPLRY++KRR+RLRLNV VK F+  NPGL DTYYDRI+PKS  V FLR S+RLR 
Sbjct: 75  EPGQAIPLRYVDKRRKRLRLNVGVKTFINNNPGLFDTYYDRIRPKSNLVPFLRPSNRLRN 134

Query: 130 FLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNLVPKYPE 189
           FLEEEKRI  ENEEL+VSKLCKLLMMS+ K++SVDKL+HVKR+FG PNDFLVNLVPKY  
Sbjct: 135 FLEEEKRICDENEELVVSKLCKLLMMSRYKVISVDKLVHVKREFGLPNDFLVNLVPKYSN 194

Query: 190 YFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPPGFILRK 249
           YF++ GSPGEG+SFL+LV  NP+FAKSVIE+RAE+ES+ TGIR+RPNF+YKLP GF LRK
Sbjct: 195 YFRLTGSPGEGQSFLELVEWNPEFAKSVIEQRAEEESQLTGIRVRPNFNYKLPRGFSLRK 254

Query: 250 EMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFG 309
           EMREWVRDWLELDYISPYEDVS+L+Q+S EMEKR V V HELLSLSLLKR+PVPILGKF 
Sbjct: 255 EMREWVRDWLELDYISPYEDVSHLDQASREMEKRMVAVLHELLSLSLLKRVPVPILGKFT 314

Query: 310 DEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELLE 369
           ++YRFSNAFSS FTRHSGIFY+SLKGGI+TA+LREAY+GD+LID DPLL IK+KFVELLE
Sbjct: 315 NDYRFSNAFSSAFTRHSGIFYMSLKGGIKTAVLREAYKGDELIDKDPLLGIKDKFVELLE 374

Query: 370 QGWRERAEQRREQANERRKDMEFMGARAVHLKD 403
           +GWRERAE  R Q  + +KDME M A+   L +
Sbjct: 375 EGWRERAEMLRVQREQVKKDMEMMAAKNGELSE 407

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BLAST of MELO3C015855 vs. TrEMBL
Match: G7IEG0_MEDTR (Plant organelle RNA recognition domain protein OS=Medicago truncatula GN=MTR_1g072550 PE=4 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 9.7e-160
Identity = 279/370 (75.41%), Postives = 323/370 (87.30%), Query Frame = 1


Query: 27  IIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRER 86
           I V  R ISSLKVVWRKD  LD+AIE DKR+K CARVV+EVLNEPGQVIPLRYLEKRR+R
Sbjct: 21  IHVHTRLISSLKVVWRKDQSLDQAIEQDKRFKQCARVVKEVLNEPGQVIPLRYLEKRRQR 80

Query: 87  LRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIV 146
           +RL V +  FL  NP L D YYDRIKPK+EPV FLR SD L  FL+EEKRI  ENE LIV
Sbjct: 81  MRLKVKIDTFLNQNPFLFDVYYDRIKPKTEPVKFLRVSDHLLQFLQEEKRIYKENEPLIV 140

Query: 147 SKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQL 206
           SKLCKLLMMSKDK++S DKLLHVKR+FGFPNDFLV+LVP+YPEYF++ G PGEGKSFL+L
Sbjct: 141 SKLCKLLMMSKDKIVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGLPGEGKSFLEL 200

Query: 207 VTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISP 266
           V  NP+FAKSVIERRAE+ESR+TGIR+RP+F+ KLPPGF+L+KEMREW+RDW+ELDY+SP
Sbjct: 201 VNWNPEFAKSVIERRAEEESRATGIRVRPSFNVKLPPGFVLKKEMREWIRDWMELDYVSP 260

Query: 267 YEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHS 326
           YEDVS+LEQ+S EMEKR+VGVFHELLSLSL KR+PVPILGKF DEYRFSNAFSS FTRHS
Sbjct: 261 YEDVSHLEQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRFSNAFSSAFTRHS 320

Query: 327 GIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELLEQGWRERAEQRREQANER 386
           GIFY+SLKGGIETAMLREAY GD+LID DPLL+IK++F ELL++GWR RAEQ + +  + 
Sbjct: 321 GIFYMSLKGGIETAMLREAYDGDKLIDIDPLLQIKDRFAELLKEGWRLRAEQLKLKQEKI 380

Query: 387 RKDMEFMGAR 397
           ++DME +  R
Sbjct: 381 KQDMELVATR 390

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BLAST of MELO3C015855 vs. TAIR10
Match: AT3G63090.1 (AT3G63090.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 546.2 bits (1406), Expect = 1.7e-155
Identity = 267/365 (73.15%), Postives = 310/365 (84.93%), Query Frame = 1


Query: 29  VQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRERLR 88
           +Q R ISSLKVVW+KD RLDEAIE DKRYKLCARVV+EVLNEPGQVIPLRYLEKRRERLR
Sbjct: 26  IQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLR 85

Query: 89  LNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSK 148
           L    K+F+  NP L + YYDRIKPKS+PV FLR + RLR FL+EE+RI  ENE L+VSK
Sbjct: 86  LTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSK 145

Query: 149 LCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVT 208
           LC+LLMM+KDK++S DKL+HVKRDFGFPNDFL+ LV KYP YF++ G P EGKSFL+LV+
Sbjct: 146 LCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVS 205

Query: 209 RNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYE 268
            NPDFAKS IE RAEDE+  TG+R+RPN++ KLP GF LRKEMREW RDWLE DYISPYE
Sbjct: 206 WNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTRDWLEQDYISPYE 265

Query: 269 DVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGI 328
           DVS+L+Q+S EMEKRTVGV HELLSLSLLKR+PVP LGKF DE+RFSNAFSSVFTRHSGI
Sbjct: 266 DVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGI 325

Query: 329 FYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELLEQGWRERAEQRREQANERRK 388
           FYLSLKGGI+TA+LREAY+ D+L+D DPLL IK+KF+ LLE+GW+ER ++ + Q  + +K
Sbjct: 326 FYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQREQVQK 385

Query: 389 DMEFM 394
           D E M
Sbjct: 386 DREMM 390

[Close]

BLAST of MELO3C015855 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 185.3 bits (469), Expect = 7.6e-47
Identity = 125/355 (35.21%), Postives = 191/355 (53.80%), Query Frame = 1


Query: 42  RKDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVK--AFLGF 101
           RK+   D  ++ DK+ KL   + + ++++P +++ LR L K R  L L    +  A L  
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 102 NPGLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDK 161
            PG+    ++ ++  +  + F   S+  R +L+E  RI  E E+++V KL KL+MMS DK
Sbjct: 139 YPGV----FEIVEEGAYSLRFKMTSEAERLYLDE-MRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 162 MLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIE 221
            + ++K+ H+K D G P +F   +  +YP+YF++V +P  G + L+L   +P+ A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 222 ------RRAEDESRSTGIRMRPNFD-YKLPPGFILRKEMREWVRDWLELDYISPYEDVSY 281
                 R  E E R+  I   P F+  KLP G  L K     +  + ++ YISPY+D S+
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 282 LEQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGIFYLS 341
           L   + E EK   GV HELLSL+  KR  V  L  F +E+RFS     +  RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 342 LKGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELL------EQGWRERAEQRRE 382
           LKG  ++  LREAY+  +LID DPL  +K K   L+       +G   + E+ RE
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGRE 426

[Close]

BLAST of MELO3C015855 vs. TAIR10
Match: AT2G31290.1 (AT2G31290.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 182.6 bits (462), Expect = 4.9e-46
Identity = 116/350 (33.14%), Postives = 185/350 (52.86%), Query Frame = 1


Query: 42  RKDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  +++L+K+ + L L      +L   P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKML 161
                Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSF-LQLVTRNPDFAKSVIER 221
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P+ A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESRSTGIRMRPNFDYKLPPGFILRKEMREWVR--DWLELDYISPYEDVSYLEQSSP 281
            A+           P+F   LP  +      + W R  ++    YISPYED   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTWT-----KPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIE 341
           E EKR+VG+ HELLSL+L K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYQGDQLIDCDPLLEIKNKFVELLEQGWRERAEQRREQANERRK 389
           T +LRE Y G +LI  DPL+ +K+KF EL++QG  E    RR  AN  +K
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE-YNHRRYLANLEKK 360

[Close]

BLAST of MELO3C015855 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-40
Identity = 106/345 (30.72%), Postives = 174/345 (50.43%), Query Frame = 1


Query: 36  SLKVVWRKDYRLDEAIENDKRYKLCARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVK- 95
           ++K+ W KD  LD  +  +K  +    +V  +   P   +P+  L   R +L L   +K 
Sbjct: 34  NVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKL 93

Query: 96  -AFLGFNPGLL--DTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKLCK 155
            AF+   P +     Y+D            R +  L     EE  +   NE  ++ +LCK
Sbjct: 94  SAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDL---YYEEVDVSRVNERDVLVRLCK 153

Query: 156 LLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVTRNP 215
           LLM++ ++ LS+  + H++ D G P D+  +L+ K+P+ F +V    +    L+L+  + 
Sbjct: 154 LLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG-LKLIHWDE 213

Query: 216 DFAKSVIERRAEDESRSTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYEDVS 275
             A S ++ R +      G   R  F  K   GF L+++  EW+++W  L Y SPY D S
Sbjct: 214 HLAVSQMQLRED-----VGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPYVDAS 273

Query: 276 YLEQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGIFYL 335
           +L+  +   EKR VGVFHELL L++ K+     +      +     F+ VF RH GIFY+
Sbjct: 274 HLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYI 333

Query: 336 SLKGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELLEQGWRERA 377
           S+K   +T +LREAY    LI+  PL+E++ KF  ++ +G+ +R+
Sbjct: 334 SMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRS 369

[Close]

BLAST of MELO3C015855 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 162.2 bits (409), Expect = 6.9e-40
Identity = 111/358 (31.01%), Postives = 185/358 (51.68%), Query Frame = 1


Query: 43  KDYRLDEAIENDKRYKLCARVV--REVLN-EPGQVIPLRYLEKRRERLRLNV--SVKAFL 102
           ++ R+ E     +++K+ ++V+   EVL  E   ++ +R  E+ R ++ L     +  F+
Sbjct: 54  REKRVQELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKISDFI 113

Query: 103 GFNPGLLDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSK 162
             +P L + Y D+       VL+   ++     L+E  +++ EN +     + + LMMS 
Sbjct: 114 RKSPKLFELYKDQ-----RGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSV 173

Query: 163 DKMLSVDKLLHVKRDFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSV 222
           DK L +DK++H +RDFG P DF +N V  +P++F++V   G+G+ +L+LV+ NP +A + 
Sbjct: 174 DKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVV-KLGDGEEYLELVSWNPAWAITE 233

Query: 223 IERRA----EDESRSTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYEDVSYL 282
           +E++     ED     G+ +   F  K PP +      R  +  + +  Y+SPY D   L
Sbjct: 234 LEKKTLGITEDCEHKPGM-LSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYADARGL 293

Query: 283 EQSSPEMEKRTVGVFHELLSLSLLKRIPVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSL 342
           E  S E +KR + V HELLS +L KR+    L  F  E+        +F +H GIFY+S 
Sbjct: 294 EAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVSE 353

Query: 343 KGGIETAMLREAYQGDQLIDCDPLLEIKNKFVELLEQGWRERAEQRREQANERRKDME 392
           +G   +  L E Y+G +LI+  PL+  K K ++    G+R R  +R  Q      DME
Sbjct: 354 RGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKF--TGYRGR--KRDIQTYSDTLDME 400

[Close]

BLAST of MELO3C015855 vs. NCBI nr
Match: gi|659101013|ref|XP_008451384.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 803.9 bits (2075), Expect = 1.3e-229
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 1


Query: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
           MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
           LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
           VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
           PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLKD 403
           KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLKD
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLKD 402

[Close]

BLAST of MELO3C015855 vs. NCBI nr
Match: gi|449436565|ref|XP_004136063.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 756.5 bits (1952), Expect = 2.3e-215
Identity = 381/401 (95.01%), Postives = 388/401 (96.76%), Query Frame = 1


Query: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
           MFSTP+SLISYLR IKS  P FLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC
Sbjct: 1   MFSTPNSLISYLRGIKSHCPCFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGL DTYYDRIKPKSEPVLF
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
           LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKL+HVKRDFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLVHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
           VNLVPKYPEYFQIVG PGEGKSFLQLV+RNPDFAKSVIERRAEDES STGIRMRPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGCPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYEDVS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
           PVPILGKFG EYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAY+G QLIDCDPLLEI
Sbjct: 301 PVPILGKFGGEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYEGGQLIDCDPLLEI 360

Query: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLK 402
           KNKFVELLEQGWRERAEQRR+QANE RKDMEFM ARAVHLK
Sbjct: 361 KNKFVELLEQGWRERAEQRRQQANELRKDMEFMCARAVHLK 401

[Close]

BLAST of MELO3C015855 vs. NCBI nr
Match: gi|802793199|ref|XP_012092282.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas])

HSP 1 Score: 601.7 bits (1550), Expect = 9.6e-169
Identity = 298/392 (76.02%), Postives = 340/392 (86.73%), Query Frame = 1


Query: 6   HSLISYLRRIKSPH-PSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVV 65
           HS+ +Y   +K+P   SF + +  +Q + ISSLKVVWRKD +LD AIE DKRYK+CARVV
Sbjct: 6   HSIRAYFHYLKNPICDSFPNPQFNIQIKYISSLKVVWRKDRKLDFAIEKDKRYKVCARVV 65

Query: 66  REVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRAS 125
           +EVLNEPGQVIPLRYLEKRRERLRLN+ VK F+  NPGL DTYYDRIKPKSE VLFLRAS
Sbjct: 66  KEVLNEPGQVIPLRYLEKRRERLRLNIKVKTFINQNPGLFDTYYDRIKPKSESVLFLRAS 125

Query: 126 DRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNLV 185
           DRLR FLEEEKRI +ENE LIVS+LCKLLMM+KDK+LS DKL+HVKR+FG PNDFLVNLV
Sbjct: 126 DRLRNFLEEEKRIQLENEGLIVSRLCKLLMMAKDKVLSADKLVHVKREFGLPNDFLVNLV 185

Query: 186 PKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPPG 245
           PKYP YF++ G PGEGKSFL+LV  N +FAKS IE+RAE+ES+ TGIR+RPNF+YKLPPG
Sbjct: 186 PKYPNYFRLTGCPGEGKSFLELVEWNSEFAKSFIEQRAEEESQLTGIRVRPNFNYKLPPG 245

Query: 246 FILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVPI 305
           F LRKEMREWVRDWLELDYISPYEDVS+L+QSSPEMEKRTVGVFHELLSLSL KR+PVPI
Sbjct: 246 FFLRKEMREWVRDWLELDYISPYEDVSHLDQSSPEMEKRTVGVFHELLSLSLFKRVPVPI 305

Query: 306 LGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNKF 365
           LGKF +EYRFSNAFSSVFTRHSGIFY+SLKGGI+TAMLREAY+  +LID DPL EIK+KF
Sbjct: 306 LGKFTEEYRFSNAFSSVFTRHSGIFYISLKGGIKTAMLREAYKDSELIDKDPLHEIKDKF 365

Query: 366 VELLEQGWRERAEQRREQANERRKDMEFMGAR 397
           VELLE+GW+ERA+Q + Q    + DME M  R
Sbjct: 366 VELLEEGWQERADQLKTQKEVLKNDMEMMATR 397

[Close]

BLAST of MELO3C015855 vs. NCBI nr
Match: gi|590713849|ref|XP_007049751.1| (Ubiquitin carboxyl-terminal hydrolase family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 595.9 bits (1535), Expect = 5.3e-167
Identity = 299/399 (74.94%), Postives = 341/399 (85.46%), Query Frame = 1


Query: 4   TPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLCARV 63
           T  S ISYL   K    SFL+ +   Q +PISSLKV+WRKD +LD+AIENDKRYKLCARV
Sbjct: 7   TISSSISYL---KFDFDSFLNPKFTFQIKPISSLKVIWRKDQKLDQAIENDKRYKLCARV 66

Query: 64  VREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLFLRA 123
           V+EVLNEPGQ IPLRYL+KRRERLRLNV VK F+  NPGL DTYYDRI+PKSE V FLR 
Sbjct: 67  VKEVLNEPGQAIPLRYLDKRRERLRLNVKVKTFINNNPGLFDTYYDRIRPKSERVPFLRP 126

Query: 124 SDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFLVNL 183
           SD+LR FLEEEKRI  ENEEL+VSKLCKLLMMS+ K++SVDKL+HVKR+FG PNDFLV+L
Sbjct: 127 SDKLRNFLEEEKRIYSENEELVVSKLCKLLMMSRYKVISVDKLVHVKREFGLPNDFLVSL 186

Query: 184 VPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYKLPP 243
           VPKY  YF++ GSPGEG+SFL+LV  NP+FAKSVIE+RAE+ESR TGIR+RPNF+YKLP 
Sbjct: 187 VPKYSNYFRLTGSPGEGQSFLELVEWNPEFAKSVIEQRAEEESRLTGIRVRPNFNYKLPA 246

Query: 244 GFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRIPVP 303
           GF LRKEMREWVRDWLELDYISPYEDVS+L+Q+S EMEKR VGVFHELLSLSL KR+P P
Sbjct: 247 GFFLRKEMREWVRDWLELDYISPYEDVSHLDQASREMEKRMVGVFHELLSLSLFKRVPAP 306

Query: 304 ILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEIKNK 363
           ILGKF D+YRFSNAFSSVFTRHSGIFY+SLKGGI+TA+LREAY+ DQLID DPLLEIK+K
Sbjct: 307 ILGKFTDDYRFSNAFSSVFTRHSGIFYMSLKGGIKTAVLREAYKDDQLIDKDPLLEIKDK 366

Query: 364 FVELLEQGWRERAEQRREQANERRKDMEFMGARAVHLKD 403
           FVELLE+GW+ERAE  R +  + +KDME M  R   L D
Sbjct: 367 FVELLEEGWQERAELLRLRREQVKKDMEMMAMRNEGLND 402

[Close]

BLAST of MELO3C015855 vs. NCBI nr
Match: gi|1009147756|ref|XP_015891579.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba])

HSP 1 Score: 590.1 bits (1520), Expect = 2.9e-165
Identity = 294/396 (74.24%), Postives = 338/396 (85.35%), Query Frame = 1


Query: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60
           MF    ++  YL  + +   S  + +I  Q +PISSLKVVWRKD  LD+AIE DK YKLC
Sbjct: 1   MFLKTRTISCYLHNLNTTFKSHTNPKIDFQIKPISSLKVVWRKDVYLDQAIEEDKEYKLC 60

Query: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPGQVIPLRYLEKRRERLRLNV +K FL  NP L D YYDRIKPK+EPV F
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVHIKTFLSRNPCLFDVYYDRIKPKTEPVQF 120

Query: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180
           +R SDRL+ FLEEEKRI M+NE LIVSKLCKLLMMSKDK++S DKL+HVKR+FGFPNDFL
Sbjct: 121 IRISDRLKQFLEEEKRITMQNEPLIVSKLCKLLMMSKDKVISADKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240
           VNLVPKY +YF++ G PGEGKSFL+LV+ NP+FAKSV+E+RAE+ESR TGIR+RPNF+YK
Sbjct: 181 VNLVPKYSQYFRLAGHPGEGKSFLELVSWNPEFAKSVVEQRAEEESRLTGIRVRPNFNYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300
           LPPGF LRKEMREWVRDW+ELDY+SPY+DVS+L+Q+SPEMEKRTVGVFHELLSLS+ KR+
Sbjct: 241 LPPGFFLRKEMREWVRDWMELDYVSPYQDVSHLDQASPEMEKRTVGVFHELLSLSIFKRV 300

Query: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360
           PVPILGKF DEYRFSNAFSSVFTRHSGIFY+SLKGGI+TAMLREAY+ DQLID DPL EI
Sbjct: 301 PVPILGKFCDEYRFSNAFSSVFTRHSGIFYMSLKGGIKTAMLREAYKDDQLIDRDPLHEI 360

Query: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGAR 397
           K+KFVELLE GWR+  +Q + Q  E  KDME M  R
Sbjct: 361 KDKFVELLE-GWRQSNKQLKLQ-KEDIKDMELMAIR 394

The following BLAST results are available for this feature:

BLAST of MELO3C015855 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPD1_ARATH	2.9e-32	27.14	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1	[more]

BLAST of MELO3C015855 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K559_CUCSA	1.6e-215	95.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G392430 PE=4 SV=1	[more]
A0A061DV66_THECC	3.7e-167	74.94	Ubiquitin carboxyl-terminal hydrolase family protein isoform 1 OS=Theobroma caca...	[more]
M5W646_PRUPE	8.5e-164	74.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006704mg PE=4 SV=1	[more]
A0A0D2PTK3_GOSRA	8.5e-164	73.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G187800 PE=4 SV=1	[more]
G7IEG0_MEDTR	9.7e-160	75.41	Plant organelle RNA recognition domain protein OS=Medicago truncatula GN=MTR_1g0...	[more]

BLAST of MELO3C015855 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63090.1	1.7e-155	73.15	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	7.6e-47	35.21	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G31290.1	4.9e-46	33.14	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	1.8e-40	30.72	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	6.9e-40	31.01	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of MELO3C015855 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101013\|ref\|XP_008451384.1\|	1.3e-229	100.00	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
gi\|449436565\|ref\|XP_004136063.1\|	2.3e-215	95.01	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus]	[more]
gi\|802793199\|ref\|XP_012092282.1\|	9.6e-169	76.02	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Jatropha curcas]	[more]
gi\|590713849\|ref\|XP_007049751.1\|	5.3e-167	74.94	Ubiquitin carboxyl-terminal hydrolase family protein isoform 1 [Theobroma cacao]	[more]
gi\|1009147756\|ref\|XP_015891579.1\|	2.9e-165	74.24	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU51976	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015855T1	MELO3C015855T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU51976	MU51976	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 43..372 score: 1.0E
None	No IPR available	unknown	Coil	Coil	coord: 373..393 scor
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 21..393 score: 3.1E
None	No IPR available	PANTHER	PTHR31476:SF3	SUBFAMILY NOT NAMED	coord: 21..393 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015855	Csa7G392430	Cucumber (Chinese Long) v2	cumeB535
MELO3C015855	Cla014747	Watermelon (97103) v1	mewmB199
MELO3C015855	Cla97C09G169490	Watermelon (97103) v2	mewmbB223
MELO3C015855	Bhi09G000847	Wax gourd	mewgoB254
MELO3C015855	CSPI07G16870	Wild cucumber (PI 183967)	cpimeB543
MELO3C015855	Cucsa.084980	Cucumber (Gy14) v1	cgymeB094
MELO3C015855	CmaCh17G011630	Cucurbita maxima (Rimu)	cmameB327
MELO3C015855	CmoCh17G011380	Cucurbita moschata (Rifu)	cmomeB319
MELO3C015855	Lsi02G023070	Bottle gourd (USVL1VR-Ls)	lsimeB186
MELO3C015855	Cp4.1LG12g11800	Cucurbita pepo (Zucchini)	cpemeB124
MELO3C015855	Carg07235	Silver-seed gourd	carmeB0113
MELO3C015855	CsaV3_7G028630	Cucumber (Chinese Long) v3	cucmeB553

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015855	Cucurbita maxima (Rimu)	cmameB825
MELO3C015855	Cucurbita moschata (Rifu)	cmomeB809
MELO3C015855	Wild cucumber (PI 183967)	cpimeB526
MELO3C015855	Cucumber (Chinese Long) v2	cumeB192
MELO3C015855	Cucumber (Chinese Long) v2	cumeB522
MELO3C015855	Watermelon (Charleston Gray)	mewcgB175
MELO3C015855	Watermelon (Charleston Gray)	mewcgB222
MELO3C015855	Watermelon (97103) v1	mewmB228
MELO3C015855	Cucurbita pepo (Zucchini)	cpemeB300
MELO3C015855	Bottle gourd (USVL1VR-Ls)	lsimeB349
MELO3C015855	Cucumber (Gy14) v2	cgybmeB458
MELO3C015855	Cucumber (Gy14) v2	cgybmeB473
MELO3C015855	Silver-seed gourd	carmeB0849
MELO3C015855	Cucumber (Chinese Long) v3	cucmeB187
MELO3C015855	Cucumber (Chinese Long) v3	cucmeB538
MELO3C015855	Watermelon (97103) v2	mewmbB205
MELO3C015855	Melon (DHL92) v3.5.1	memeB091
MELO3C015855	Cucumber (Gy14) v1	cgymeB093