MELO3C015536.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015536.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr02 : 2627902 .. 2630787 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATTCTATAACCCACCAATCTTCTTTTACCTTTTTGGAGTCTCTCCGGCGCCCATGGCTCTCTCCATTTCTTCCACTGCGCTCTCCTCCTTCCCAATCAGGTCAACCCTAATTCACTTTTTTTTTTTTTCTTTTCTCTCATTCGTTTCTCCCAATTTCTCATTCATTCTCCTTTGTTCTCTTTTGACTACAGAGAATCCTCTCACAGAGCAAATTTTCCGGGAAACTTCCCAAATCATAAGCTCCGGCGAGATTACTCCGATTTAAAAGCGGCGAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCCGATAGACCCCTCTGGTTTCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGGTTCATTAATTTATAGCTTATTTCACTCGTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGGTTCGTAGAATTGGAGATTTAAAGGTTAAACAATGGCTTTCGCCTCAACTTTAGCAACAGAAACAATTAATTTAGTACATTAATCTTTTTCAAATATGTAATGATTTCATTCTATGGTTTAAAAGTTCATCAAATTTTTTATGTCAAATTTTATTTATTTAAAATGTTCTTGTTTTGTTCTATTAGTTTAGTTTATGATCTTTGTATATATGCTCTCAATTTTATAACAATTTAATCTTCTGCCGAAGAATTCATCAAAATTCAATATCATTTTTTTTTTTACTTTTATGTATACTTTGCATTTTTACAAAACTAACGAGTTTCCATAATTTATATAATACTTACAAAATTTAAACTATAAATATTAAAAGGTTACATTGGAAAAATAAAAGTTTAAAAACTAGATCGTTACAGTTACAGTTTAAAGACTAAATTGTTACTTTTATAAAAGTTTTAGTGCAATTAGATTGAATTTCTAAACGTTTAGAAATAAACGTTTATAAACGTTTTTATTCTACTCGAAAAGTATGCACTTTTAAGTACTAAGAGTGATTGTTTAACTTTTGTTTGTTCCTTCGTAGCCTTCCCGGCGATTTTGGCTTTGATCCGCTTGGATTGGGTATGCTACTTTCCCTTTTTCTCTTTGATTCAAATTTAGTATTACTTTTAAAATACTACTTTTGGTTCTTCTCCTTGGAATAGAAACGTTGGTTGAGTTTGTGAGATATTTTCTTTTAGGTAGGAAATATGGCAGCAGGAGTGTGAGTATGAAAAGTTAAGAGTTTGTTGGAGAACCGAAATATAATATGGATTATTAAAAATAGGTGTCGGGATGTGTGAGGAATCGAAGACGAAGAAACGAAAATGAAATCGTAGAACATGAAAACAACAAAGAAAAAGATGATTGGATTGAAAACTGTATAAACAAAATGAGTTTTCTATAACAAACATATTTAAATTGAAAACTTTCAATCCAAACTAAACTCATAATGAATGTTTCATTACGGACTCTCAAATAGATTTATAGTGACTATTTAATGGGCTTAAGCAAACCACAGTCTATAGTATATCAAACAATAGCTTGAGTTTATAACTTGTATTTTATAGTGTTTTTATCCTTTTGAAAATCAATTTTTACAAATAGAATTGGAATCGTCAATCAAACTCATTTTTTGTCAAACTCAATACAAACATCAAAGTGATAATTGAAAATGTGGGTGTCAGGTTCGGACCCAGAGACACTAAAATGGTTCGCTCAAGCGGAACTAATGCACGCAAGATGGGCAATGCTAGCCGTAGCCGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAATTTCTCATGGTACGACGCCGGATCTCGAGAATATTTTGCAGATCCGACGACATTGCTGGTGGCGCAATTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCCGACTTGGTCAACCCGGGAAGTGTGGACGTTGACTTGAAGCTGCCCCACAAAAAGAAAGTAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCTATGATGTGGGGGAGGGGGTCGCCGGAGCCGGTGATGGTGCTCAGGACTAAAGAGATTAAGAATGGGAGGTTGGCTATGTTGGCCTTCGTTGGACTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCCCTTGAGAATCTTGCTGCACACGTCGCAGATCCCGGCCATTGCAATATCTTTTCGGTACGATTATCTTCCCTAATCAATAATGTGTTTCTCCTATCAGTACTATTGATTGCTAATAATAGAAATCCATTGATGTCTATCGTCAATGAAATCTAATATTTTGTAATATGTCATAAATATTTTAATTTATTTTATTATATTTAAAAGTATTTTTTTATTTGTAATTTTTTTTTATTTTTGAAAAGGAATATAAATAAAAACCATGATAGAAAAGAGCCTAAACTAGTACACTTTTGAAAATTCATAACTAAAATTAAAATAATTAGTTGAATAAGGTCAATTTGTTATTTAAGTTCAATTCACACGACTTGAAAATATGTTGAATTGGTATATAGTTTTTAATTTTGTATCTAATAAATAAATTTTAATTTTGAGTTCGATAAGGGCTTATGAGAATCGAGTATTTTTTTTTCTTTTATAAAATTTGTTAACTTATTATTATTATATTTTTTTTTTGCAGGCATTTACTTCTGGTTCGGGTTGAAATCGAAACTTTCATTTTGGTTCGGTTGAGATGGTGAAGTGTGTACATAAAGCAAAGAGATGAGAAGAATTTGTGATGGTTTACTATATATAACCCTATAAGTACTATTCAAACTCTTAAATGATAGATTCCTATCTTAAATCATTGAATGACGATCTAAAAATTTACGTAGATGAGTGAAAACAAATTTGATATCATATCATCTATTAGAACCAAAATTTTTCGTTT

mRNA sequence

TACATTCTATAACCCACCAATCTTCTTTTACCTTTTTGGAGTCTCTCCGGCGCCCATGGCTCTCTCCATTTCTTCCACTGCGCTCTCCTCCTTCCCAATCAGAGAATCCTCTCACAGAGCAAATTTTCCGGGAAACTTCCCAAATCATAAGCTCCGGCGAGATTACTCCGATTTAAAAGCGGCGAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCCGATAGACCCCTCTGGTTTCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTTGATCCGCTTGGATTGGGTTCGGACCCAGAGACACTAAAATGGTTCGCTCAAGCGGAACTAATGCACGCAAGATGGGCAATGCTAGCCGTAGCCGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAATTTCTCATGGTACGACGCCGGATCTCGAGAATATTTTGCAGATCCGACGACATTGCTGGTGGCGCAATTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCCGACTTGGTCAACCCGGGAAGTGTGGACGTTGACTTGAAGCTGCCCCACAAAAAGAAAGTAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCTATGATGTGGGGGAGGGGGTCGCCGGAGCCGGTGATGGTGCTCAGGACTAAAGAGATTAAGAATGGGAGGTTGGCTATGTTGGCCTTCGTTGGACTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCCCTTGAGAATCTTGCTGCACACGTCGCAGATCCCGGCCATTGCAATATCTTTTCGGCATTTACTTCTGGTTCGGGTTGAAATCGAAACTTTCATTTTGGTTCGGTTGAGATGGTGAAGTGTGTACATAAAGCAAAGAGATGAGAAGAATTTGTGATGGTTTACTATATATAACCCTATAAGTACTATTCAAACTCTTAAATGATAGATTCCTATCTTAAATCATTGAATGACGATCTAAAAATTTACGTAGATGAGTGAAAACAAATTTGATATCATATCATCTATTAGAACCAAAATTTTTCGTTT

Coding sequence (CDS)

ATGGCTCTCTCCATTTCTTCCACTGCGCTCTCCTCCTTCCCAATCAGAGAATCCTCTCACAGAGCAAATTTTCCGGGAAACTTCCCAAATCATAAGCTCCGGCGAGATTACTCCGATTTAAAAGCGGCGAAATCCGGCGTGTCTAGCGTCTGTGAACCGCTCCCTCCCGATAGACCCCTCTGGTTTCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTTGATCCGCTTGGATTGGGTTCGGACCCAGAGACACTAAAATGGTTCGCTCAAGCGGAACTAATGCACGCAAGATGGGCAATGCTAGCCGTAGCCGGAATCCTTCTACCGGAATGGTTCGAGAGCTTAGGACTCATACAAAATTTCTCATGGTACGACGCCGGATCTCGAGAATATTTTGCAGATCCGACGACATTGCTGGTGGCGCAATTGGCGTTGATGGGGTGGGTGGAGGGGAGGCGATGGGCCGACTTGGTCAACCCGGGAAGTGTGGACGTTGACTTGAAGCTGCCCCACAAAAAGAAAGTAAAGGCAGATGTGGGCTACCCGGGGGGGTTCTGGTTTGACCCTATGATGTGGGGGAGGGGGTCGCCGGAGCCGGTGATGGTGCTCAGGACTAAAGAGATTAAGAATGGGAGGTTGGCTATGTTGGCCTTCGTTGGACTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCCCTTGAGAATCTTGCTGCACACGTCGCAGATCCCGGCCATTGCAATATCTTTTCGGCATTTACTTCTGGTTCGGGTTGA

Protein sequence

MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFTSGSG

Homology

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BLAST of MELO3C015536.2 vs. NCBI nr
Match: XP_008450947.1 (PREDICTED: photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucumis melo])

HSP 1 Score: 564.3 bits (1453), Expect = 2.2e-157
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL 60
           MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL
Sbjct: 1   MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL 60

Query: 61  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF 120
           WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF
Sbjct: 61  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF 120

Query: 121 ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK 180
           ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK
Sbjct: 121 ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK 180

Query: 181 KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 240
           KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP
Sbjct: 181 KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 240

Query: 241 LENLAAHVADPGHCNIFSAFTSGSG 266
           LENLAAHVADPGHCNIFSAFTSGSG
Sbjct: 241 LENLAAHVADPGHCNIFSAFTSGSG 265

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BLAST of MELO3C015536.2 vs. NCBI nr
Match: XP_004144043.1 (PREDICTED: chlorophyll a-b binding protein, chloroplastic [Cucumis sativus] >KGN66318.1 hypothetical protein Csa_1G597160 [Cucumis sativus])

HSP 1 Score: 551.6 bits (1420), Expect = 1.5e-153
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MALSISS--TALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDR 60
           MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDR
Sbjct: 1   MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDR 60

Query: 61  PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPE 120
           PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPE
Sbjct: 61  PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPE 120

Query: 121 WFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLP 180
           WFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLP
Sbjct: 121 WFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLP 180

Query: 181 HKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQ 240
           HKKK KADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQ
Sbjct: 181 HKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQ 240

Query: 241 GPLENLAAHVADPGHCNIFSAFTSGSG 266
           GPLENLAAHVADPGHCNIFSAF+SGSG
Sbjct: 241 GPLENLAAHVADPGHCNIFSAFSSGSG 267

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BLAST of MELO3C015536.2 vs. NCBI nr
Match: XP_022967968.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 512.3 bits (1318), Expect = 9.8e-142
Identity = 242/266 (90.98%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSH---RANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPD 60
           MALSISSTALSS PIRESSH     NFPG FP + LRR  S L AAKSGVSSVCEPLPPD
Sbjct: 17  MALSISSTALSSLPIRESSHSHRALNFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPPD 76

Query: 61  RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLP 120
           RPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAELMHARWAMLAVAGILLP
Sbjct: 77  RPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLP 136

Query: 121 EWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL 180
           EWFESLGLIQNFSWYDAG+REYFADPTTLLVAQL LMGWVEGRRWAD+VNPG VDVDLKL
Sbjct: 137 EWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLKL 196

Query: 181 PHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 240
           PHKKK   DVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG
Sbjct: 197 PHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 256

Query: 241 QGPLENLAAHVADPGHCNIFSAFTSG 264
           QGPLENLAAHVADPGHCNIFSAF+SG
Sbjct: 257 QGPLENLAAHVADPGHCNIFSAFSSG 282

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BLAST of MELO3C015536.2 vs. NCBI nr
Match: XP_022929243.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 511.5 bits (1316), Expect = 1.7e-141
Identity = 241/267 (90.26%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSH----RANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPP 60
           MALSISSTALS+ PIRESSH      NFPG FP + LRR  + L AAKSGVSSVCEPLPP
Sbjct: 1   MALSISSTALSTLPIRESSHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEWFESLGLIQNFSWYDAG+REYFADPTTLLVAQL LMGWVEGRRWAD+VNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKKK   DVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKKPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFTSG 264
           GQGPLENLAAHVADPGHCNIFSAF+SG
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSG 267

[Close]

BLAST of MELO3C015536.2 vs. NCBI nr
Match: XP_023529387.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.1 bits (1307), Expect = 1.9e-140
Identity = 239/267 (89.51%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSH----RANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPP 60
           MALSISS ALS+ PIRESSH      NFPG FP + LRR  + LKAAKSGVSSVCEPLPP
Sbjct: 1   MALSISSAALSTIPIRESSHTHHRALNFPGKFPKYNLRRGSTHLKAAKSGVSSVCEPLPP 60

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAELMHARWAMLAVAGILL
Sbjct: 61  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILL 120

Query: 121 PEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEWFESLGLIQNFSWYDAG+REYFADP TLLVAQL LMGWVEGRRWAD+VNPGSVDVDLK
Sbjct: 121 PEWFESLGLIQNFSWYDAGTREYFADPMTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLK 180

Query: 181 LPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LPHKK+   DVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT
Sbjct: 181 LPHKKRPTPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFTSG 264
           GQGPLENLAAHVADPGHCNIFSAF+SG
Sbjct: 241 GQGPLENLAAHVADPGHCNIFSAFSSG 267

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BLAST of MELO3C015536.2 vs. TAIR10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6)

HSP 1 Score: 399.8 bits (1026), Expect = 1.3e-111
Identity = 190/271 (70.11%), Postives = 212/271 (78.23%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNH---------KLRRDYSDLKAAKSGVSSVC 60
           MA +I+S   S+  +  S+ R   P     H         +L R+   +  A   VSSVC
Sbjct: 1   MAFAIASALTSTLTL--STSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVC 60

Query: 61  EPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAV 120
           EPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+TLKWFAQAEL+H+RWAMLAV
Sbjct: 61  EPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAV 120

Query: 121 AGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSV 180
            GI++PE  E LG I+NFSWYDAGSREYFAD TTL VAQ+ LMGW EGRRWADL+ PGSV
Sbjct: 121 TGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSV 180

Query: 181 DVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF 240
           D++ K PHK   K DVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  F
Sbjct: 181 DIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCF 240

Query: 241 QAIYTGQGPLENLAAHVADPGHCNIFSAFTS 263
           QA YT Q P+ENL AH+ADPGHCN+FSAFTS
Sbjct: 241 QATYTSQDPIENLMAHLADPGHCNVFSAFTS 269

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BLAST of MELO3C015536.2 vs. TAIR10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2)

HSP 1 Score: 319.3 bits (817), Expect = 2.2e-87
Identity = 136/206 (66.02%), Postives = 161/206 (78.16%), Query Frame = 0


Query: 56  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGIL 115
           PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP++LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 116 LPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 175
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 176 KLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 235
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 236 TGQGPLENLAAHVADPGHCNIFSAFT 262
           TG GP++NL AH+ADPGH  IF+AFT
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAFT 255

[Close]

BLAST of MELO3C015536.2 vs. TAIR10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 109/229 (47.60%), Postives = 138/229 (60.26%), Query Frame = 0


Query: 32  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE 91
           +L RD S      S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE
Sbjct: 29  RLNRDLSFTSIGSSAKTSSFK-VEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPE 88

Query: 92  TLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQL 151
            LKWF QAEL++ RWAML VAG+LLPE F  +G+I    WYDAG  +YFA  +TL V + 
Sbjct: 89  NLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEF 148

Query: 152 ALMGWVEGRRWADLVNPGSVDVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVL 211
            L  +VE RRW D+ NPGSV+ D         K +VGYPGG  F+P+ +      P    
Sbjct: 149 ILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEA 208

Query: 212 RTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF 261
           + KE+ NGRLAMLAF+G   Q   TG+GP ENL  H++DP H  I   F
Sbjct: 209 KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250

[Close]

BLAST of MELO3C015536.2 vs. TAIR10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5)

HSP 1 Score: 188.0 bits (476), Expect = 7.7e-48
Identity = 104/255 (40.78%), Postives = 150/255 (58.82%), Query Frame = 0


Query: 21  RANFPGNFPNHK------LRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 80
           R    G F +H+      + R  S +KAA  G++     +  +R  W PG +PP +LDG+
Sbjct: 6   RGGITGGFLHHRRDASSVITRRISSVKAAGGGINPT---VAVERATWLPGLNPPPYLDGN 65

Query: 81  LPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDA 140
           L GD+GFDPLGLG DPE+LKW+ QAEL+H+R+AML VAGIL  +   + G+     WY+A
Sbjct: 66  LAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEA 125

Query: 141 GSREY-FADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKVK---ADVGYP 200
           G+ ++ FA   TL+V Q  LMG+ E +R+ D V+PGS   +       +      + GYP
Sbjct: 126 GAVKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYP 185

Query: 201 GGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVAD 260
           GG   +P+   +   +     + KEIKNGRLAM+A +G + QA  T  GP++NL  H+++
Sbjct: 186 GGPLLNPLGLAK-DVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSN 245

Query: 261 PGHCNIF-SAFTSGS 265
           P H  I  + FTS S
Sbjct: 246 PWHKTIIQTLFTSTS 256

[Close]

BLAST of MELO3C015536.2 vs. TAIR10
Match: AT1G61520.1 (photosystem I light harvesting complex gene 3)

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-42
Identity = 94/220 (42.73%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 57  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETL------KWFAQAELMHARWAMLA 116
           +RPLWF  S    +LDGSLPGD+GFDPLGL SDPE        +W A  E+++ R+AML 
Sbjct: 52  NRPLWFASSQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEIINGRFAMLG 111

Query: 117 VAGILLPEWFESLGLI---QNFSWYD------AGSREYFADPTTLLVAQLALMGWVEGRR 176
            AG + PE     GLI       W+       AG+  Y+AD  TL V ++ALMG+ E RR
Sbjct: 112 AAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRR 171

Query: 177 WADLVNPGSVDVDLKLPHKKKV--KADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNG 236
             D  NPGS+     L  +K +    +  YPGG +F+P+ +G+   + +  L+ KE+KNG
Sbjct: 172 LQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGK-DEKSLKELKLKEVKNG 231

Query: 237 RLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSA 260
           RLAMLA +G + Q + TG GP +NL  H+ADP + N+ ++
Sbjct: 232 RLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTS 269

[Close]

BLAST of MELO3C015536.2 vs. Swiss-Prot
Match: sp|Q8LCQ4|LHCA6_ARATH (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.3e-110
Identity = 190/271 (70.11%), Postives = 212/271 (78.23%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNH---------KLRRDYSDLKAAKSGVSSVC 60
           MA +I+S   S+  +  S+ R   P     H         +L R+   +  A   VSSVC
Sbjct: 1   MAFAIASALTSTLTL--STSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVC 60

Query: 61  EPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAV 120
           EPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+TLKWFAQAEL+H+RWAMLAV
Sbjct: 61  EPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAV 120

Query: 121 AGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSV 180
            GI++PE  E LG I+NFSWYDAGSREYFAD TTL VAQ+ LMGW EGRRWADL+ PGSV
Sbjct: 121 TGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSV 180

Query: 181 DVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWF 240
           D++ K PHK   K DVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF+G  F
Sbjct: 181 DIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFLGFCF 240

Query: 241 QAIYTGQGPLENLAAHVADPGHCNIFSAFTS 263
           QA YT Q P+ENL AH+ADPGHCN+FSAFTS
Sbjct: 241 QATYTSQDPIENLMAHLADPGHCNVFSAFTS 269

[Close]

BLAST of MELO3C015536.2 vs. Swiss-Prot
Match: sp|P13869|CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.6e-87
Identity = 139/206 (67.48%), Postives = 163/206 (79.13%), Query Frame = 0


Query: 56  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGIL 115
           PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE+LKW AQAEL+H+RWAML  AGI 
Sbjct: 63  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIF 122

Query: 116 LPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 175
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PG V+ D 
Sbjct: 123 IPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDP 182

Query: 176 KLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 235
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 236 TGQGPLENLAAHVADPGHCNIFSAFT 262
           TG GP++NL AH+ADPGH  IF+AF+
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFAAFS 268

[Close]

BLAST of MELO3C015536.2 vs. Swiss-Prot
Match: sp|P10708|CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-86
Identity = 140/225 (62.22%), Postives = 167/225 (74.22%), Query Frame = 0


Query: 37  YSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWF 96
           YS    A+S  ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE+L+W 
Sbjct: 45  YSTTPTARS-ATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN 104

Query: 97  AQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGW 156
            QAEL+H RWAML  AGI +PE    +G++   SWY AG +EYF D TTL + +L L+GW
Sbjct: 105 QQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGW 164

Query: 157 VEGRRWADLVNPGSVDVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEI 216
            EGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEI
Sbjct: 165 AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEI 224

Query: 217 KNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFT 262
           KNGRLAMLA +G WFQ IYTG GP++NL AH+ADPGH  IF+AF+
Sbjct: 225 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268

[Close]

BLAST of MELO3C015536.2 vs. Swiss-Prot
Match: sp|Q9SYW8|LHCA2_ARATH (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.0e-86
Identity = 136/206 (66.02%), Postives = 161/206 (78.16%), Query Frame = 0


Query: 56  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGIL 115
           PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP++LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 116 LPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDL 175
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GW EGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 176 KLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 235
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 236 TGQGPLENLAAHVADPGHCNIFSAFT 262
           TG GP++NL AH+ADPGH  IF+AFT
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFAAFT 255

[Close]

BLAST of MELO3C015536.2 vs. Swiss-Prot
Match: sp|P27521|CA4_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.1e-54
Identity = 109/229 (47.60%), Postives = 138/229 (60.26%), Query Frame = 0


Query: 32  KLRRDYSDLKAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE 91
           +L RD S      S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE
Sbjct: 29  RLNRDLSFTSIGSSAKTSSFK-VEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPE 88

Query: 92  TLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQL 151
            LKWF QAEL++ RWAML VAG+LLPE F  +G+I    WYDAG  +YFA  +TL V + 
Sbjct: 89  NLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEF 148

Query: 152 ALMGWVEGRRWADLVNPGSVDVDLKLPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVL 211
            L  +VE RRW D+ NPGSV+ D         K +VGYPGG  F+P+ +      P    
Sbjct: 149 ILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEA 208

Query: 212 RTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAF 261
           + KE+ NGRLAMLAF+G   Q   TG+GP ENL  H++DP H  I   F
Sbjct: 209 KEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250

[Close]

BLAST of MELO3C015536.2 vs. TrEMBL
Match: tr|A0A1S3BQD6|A0A1S3BQD6_CUCME (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492384 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-157
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL 60
           MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL
Sbjct: 1   MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL 60

Query: 61  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF 120
           WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF
Sbjct: 61  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF 120

Query: 121 ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK 180
           ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK
Sbjct: 121 ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK 180

Query: 181 KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 240
           KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP
Sbjct: 181 KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 240

Query: 241 LENLAAHVADPGHCNIFSAFTSGSG 266
           LENLAAHVADPGHCNIFSAFTSGSG
Sbjct: 241 LENLAAHVADPGHCNIFSAFTSGSG 265

[Close]

BLAST of MELO3C015536.2 vs. TrEMBL
Match: tr|A0A0A0LX05|A0A0A0LX05_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G597160 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 9.7e-154
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MALSISS--TALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDR 60
           MALSISS  TALSSFPIR+S HR+NFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDR
Sbjct: 1   MALSISSTATALSSFPIRDSYHRSNFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDR 60

Query: 61  PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPE 120
           PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPE
Sbjct: 61  PLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPE 120

Query: 121 WFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLP 180
           WFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLP
Sbjct: 121 WFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLP 180

Query: 181 HKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQ 240
           HKKK KADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQ
Sbjct: 181 HKKKAKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQ 240

Query: 241 GPLENLAAHVADPGHCNIFSAFTSGSG 266
           GPLENLAAHVADPGHCNIFSAF+SGSG
Sbjct: 241 GPLENLAAHVADPGHCNIFSAFSSGSG 267

[Close]

BLAST of MELO3C015536.2 vs. TrEMBL
Match: tr|A0A2N9I4K7|A0A2N9I4K7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47504 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.7e-121
Identity = 210/258 (81.40%), Postives = 224/258 (86.82%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNHKLRRDYSDLKAAKSGVSSVCEPLPPDRPL 60
           MALSI+STALSS P RE  H+  F GNF      R  S + A K GVSSVCEPLPPDRPL
Sbjct: 1   MALSIASTALSSLPTRE-LHQRFFLGNFTTCLPGRT-SHVNATK-GVSSVCEPLPPDRPL 60

Query: 61  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLPEWF 120
           WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAELMH RWAMLAVAGIL+PEW 
Sbjct: 61  WFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHGRWAMLAVAGILIPEWL 120

Query: 121 ESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKLPHK 180
           ES+G I++FSWYDAG+REYFAD TTL V QLALMGWVEGRRWADL+NPGSVD++ K+PHK
Sbjct: 121 ESIGYIKDFSWYDAGTREYFADQTTLFVVQLALMGWVEGRRWADLINPGSVDIEPKVPHK 180

Query: 181 KKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGP 240
           K  K DVGYPGG WFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVG WFQAIYTG+GP
Sbjct: 181 KNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGP 240

Query: 241 LENLAAHVADPGHCNIFS 259
           LENL  H+ADPGHCNIFS
Sbjct: 241 LENLTCHIADPGHCNIFS 255

[Close]

BLAST of MELO3C015536.2 vs. TrEMBL
Match: tr|A0A0F7GZY6|A0A0F7GZY6_9ROSI (Chlorophyll a-b binding protein, chloroplastic OS=Monsonia emarginata OX=28966 GN=LHCA6 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.2e-121
Identity = 206/265 (77.74%), Postives = 226/265 (85.28%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNH---KLRRDYSDLKAAKSGVSSVCEPLPPD 60
           MAL  +STALSS  +RE   +       P     ++R   + L A K GVSSVCEPLPPD
Sbjct: 1   MALPSASTALSSITLREIPRKLLTGKCRPTASAVQVRPSRTRLNAGK-GVSSVCEPLPPD 60

Query: 61  RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILLP 120
           RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPE LKWFAQAELMHARWAMLAV+GIL+P
Sbjct: 61  RPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVSGILIP 120

Query: 121 EWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLKL 180
           EWFE LG+I+N+SWYDAGSREYFADPTTL V QLALMGW EGRRWAD++NPG VD++ KL
Sbjct: 121 EWFEGLGIIENYSWYDAGSREYFADPTTLFVVQLALMGWAEGRRWADMLNPGCVDIEFKL 180

Query: 181 PHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTG 240
           PHKK  K DVGYPGGFWFDPM WGRG+PEPVMVLRTKEIKNGRLAMLAFVG WFQA+YTG
Sbjct: 181 PHKKNPKMDVGYPGGFWFDPMFWGRGTPEPVMVLRTKEIKNGRLAMLAFVGFWFQAVYTG 240

Query: 241 QGPLENLAAHVADPGHCNIFSAFTS 263
           +GP+ENL AH+ADPGHCNIFSAFTS
Sbjct: 241 EGPIENLRAHIADPGHCNIFSAFTS 264

[Close]

BLAST of MELO3C015536.2 vs. TrEMBL
Match: tr|A0A0K9RHL0|A0A0K9RHL0_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=SOVF_065920 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.4e-120
Identity = 204/265 (76.98%), Postives = 229/265 (86.42%), Query Frame = 0


Query: 1   MALSISSTALSSFPIRESSHRANFPGNFPNHKLRR----DYSDLKAAKSGVSSVCEPLPP 60
           MAL++SSTALS+ PIRE       PG     +L++      S + A K G+SSVCEPLPP
Sbjct: 1   MALAVSSTALSNLPIRE------IPGKLYPSQLKKCMVGSNSKVSAGKGGISSVCEPLPP 60

Query: 61  DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPETLKWFAQAELMHARWAMLAVAGILL 120
           DRPLWFPGS+PP+WLDGSLPGDFGFDPLGLGSDPETL+WFAQAELMH+RWAMLAVAGIL+
Sbjct: 61  DRPLWFPGSTPPQWLDGSLPGDFGFDPLGLGSDPETLRWFAQAELMHSRWAMLAVAGILI 120

Query: 121 PEWFESLGLIQNFSWYDAGSREYFADPTTLLVAQLALMGWVEGRRWADLVNPGSVDVDLK 180
           PEW ES+GL++NF+WYDAGSREYFADPTTL V QLALMGWVEGRRWAD VNPG VD++ K
Sbjct: 121 PEWLESIGLMENFNWYDAGSREYFADPTTLFVVQLALMGWVEGRRWADYVNPGCVDIEPK 180

Query: 181 LPHKKKVKADVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYT 240
           LP++K  K DVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGL FQA+YT
Sbjct: 181 LPNRKNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLCFQAVYT 240

Query: 241 GQGPLENLAAHVADPGHCNIFSAFT 262
           G+GPLENL+ HVADPGHCNIFSAF+
Sbjct: 241 GEGPLENLSRHVADPGHCNIFSAFS 259

The following BLAST results are available for this feature:

BLAST of MELO3C015536.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450947.1	2.2e-157	100.00	PREDICTED: photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucum...	[more]
XP_004144043.1	1.5e-153	97.38	PREDICTED: chlorophyll a-b binding protein, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_022967968.1	9.8e-142	90.98	photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur...	[more]
XP_022929243.1	1.7e-141	90.26	photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur...	[more]
XP_023529387.1	1.9e-140	89.51	photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur...	[more]

BLAST of MELO3C015536.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19150.1	1.3e-111	70.11	photosystem I light harvesting complex gene 6	[more]
AT3G61470.1	2.2e-87	66.02	photosystem I light harvesting complex gene 2	[more]
AT3G47470.1	1.7e-55	47.60	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT1G45474.1	7.7e-48	40.78	photosystem I light harvesting complex gene 5	[more]
AT1G61520.1	3.7e-42	42.73	photosystem I light harvesting complex gene 3	[more]

BLAST of MELO3C015536.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LCQ4\|LHCA6_ARATH	2.3e-110	70.11	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]
sp\|P13869\|CB12_PETHY	3.6e-87	67.48	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
sp\|P10708\|CB12_SOLLC	1.4e-86	62.22	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
sp\|Q9SYW8\|LHCA2_ARATH	4.0e-86	66.02	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]
sp\|P27521\|CA4_ARATH	3.1e-54	47.60	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MELO3C015536.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQD6\|A0A1S3BQD6_CUCME	1.4e-157	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0LX05\|A0A0A0LX05_CUCSA	9.7e-154	97.38	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A2N9I4K7\|A0A2N9I4K7_FAGSY	1.7e-121	81.40	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47504 PE=4 SV=1	[more]
tr\|A0A0F7GZY6\|A0A0F7GZY6_9ROSI	2.2e-121	77.74	Chlorophyll a-b binding protein, chloroplastic OS=Monsonia emarginata OX=28966 G...	[more]
tr\|A0A0K9RHL0\|A0A0K9RHL0_SPIOL	1.4e-120	76.98	Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea OX=3562 GN=S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009536	plastid
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015536.2.1	MELO3C015536.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..233 e-value: 4.6E-53 score: 180.0
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	G3DSA:1.10.3460.10		coord: 68..253 e-value: 2.0E-75 score: 254.9
None	No IPR available	PANTHER	PTHR21649:SF5	PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC	coord: 1..262
None	No IPR available	SUPERFAMILY	SSF103511	Chlorophyll a-b binding protein	coord: 57..262
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..262

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015536.2	Csa1G597160	Cucumber (Chinese Long) v2	cumedB033
MELO3C015536.2	CSPI01G28860	Wild cucumber (PI 183967)	cpimedB036
MELO3C015536.2	Cucsa.141900	Cucumber (Gy14) v1	cgymedB235
MELO3C015536.2	Cp4.1LG04g11230	Cucurbita pepo (Zucchini)	cpemedB733
MELO3C015536.2	CsGy1G028080	Cucumber (Gy14) v2	cgybmedB032
MELO3C015536.2	Cla011145	Watermelon (97103) v1	medwmB262
MELO3C015536.2	ClCG03G014920	Watermelon (Charleston Gray)	medwcgB237
MELO3C015536.2	Cla97C03G065150	Watermelon (97103) v2	medwmbB235
MELO3C015536.2	Bhi02G001494	Wax gourd	medwgoB303
MELO3C015536.2	Carg27601	Silver-seed gourd	carmedB0656
MELO3C015536.2	CsaV3_1G041230	Cucumber (Chinese Long) v3	cucmedB039

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015536.2	Wax gourd	medwgoB288
MELO3C015536.2	Cucumber (Gy14) v2	cgybmedB479
MELO3C015536.2	Cucumber (Gy14) v1	cgymedB581
MELO3C015536.2	Cucurbita maxima (Rimu)	cmamedB061
MELO3C015536.2	Cucurbita maxima (Rimu)	cmamedB111
MELO3C015536.2	Cucurbita maxima (Rimu)	cmamedB383
MELO3C015536.2	Cucurbita maxima (Rimu)	cmamedB937
MELO3C015536.2	Cucurbita moschata (Rifu)	cmomedB053
MELO3C015536.2	Cucurbita moschata (Rifu)	cmomedB104
MELO3C015536.2	Cucurbita moschata (Rifu)	cmomedB370
MELO3C015536.2	Cucurbita moschata (Rifu)	cmomedB926
MELO3C015536.2	Cucurbita pepo (Zucchini)	cpemedB156
MELO3C015536.2	Cucurbita pepo (Zucchini)	cpemedB353
MELO3C015536.2	Cucurbita pepo (Zucchini)	cpemedB393
MELO3C015536.2	Wild cucumber (PI 183967)	cpimedB538
MELO3C015536.2	Cucumber (Chinese Long) v2	cumedB524
MELO3C015536.2	Melon (DHL92) v3.6.1	medmedB078
MELO3C015536.2	Bottle gourd (USVL1VR-Ls)	lsimedB310
MELO3C015536.2	Bottle gourd (USVL1VR-Ls)	lsimedB418
MELO3C015536.2	Watermelon (Charleston Gray)	medwcgB217
MELO3C015536.2	Watermelon (97103) v1	medwmB250
MELO3C015536.2	Silver-seed gourd	carmedB0098
MELO3C015536.2	Silver-seed gourd	carmedB0611
MELO3C015536.2	Cucumber (Chinese Long) v3	cucmedB552
MELO3C015536.2	Watermelon (97103) v2	medwmbB257