MELO3C015338 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015338
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ribosome biogenesis BRX1
Location	chr2 : 847511 .. 852781 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATTTTGACTTTGTAAAAAGAAAAACTCTCTGCCGCTTCTCTCCCTCTCTTTCTGATCACTTCTCCACTCTCGTCCTCTTCATCCGGCCACCGCGCCGCCGATCATCTGGAAAGCTTTTGAGTTCTCTTCGTTTCTCTTTTCCACTCACTCTCGGTTTCTCTTCCCCTCACTGCTCGCCTGGTAGACGGGTAAGAATCATCCTTTCAGTTTAAGTCCCATTAACAATAGCTTGTAGAGTTATAGTATGTAAGTTTGAACATATTCGAACATGACCCAGCTAGAAATTAAGCCTTTTTAATATAAATTACTGGGTAAGGATTCATTTTACTAATTTCCAAACTCGTTTTTAGTGCGGTTGGTTAGACTTTGTGCTTTTGAATTATTCCCTTTTGCGATTTCGAGAAAATTTTGGAGGAATTGACATTGAAGCTTAAGACTGAGTGAACATGGCTATGTAATAGCATTTTAATTGAGTTGAGTAGTTTTGGTCCAAAGTTATCAGTTATGAAAAATTGTTGCAGGTCGGCTAAGGACTTTTAAGTTGTGTCAAACTAGTCAATAAAGTAACTTAACTACCAATTCGCCTTAAGTGCCGGGTTGTTGGGATTTGTTTGCTGTAATTTGTCTAGGGTTATGTGTGTTTGTGCTTTGTTGTTACTGAGTATGTTGAGTTTTGTGTTGAGCTTCCGGATGTGAAGTATATGAAAAGTCATTTGTAATTGTTTTAAACTTGAAACGCCTTTGAGATTTGTTATTCTCTTGTGTCATATGATTATGTTCCGGGACGTCTACCGATTAAATCATGGACCTCATACATACGTGTATAGGCATAGTCATTATATTTAAAAGTTATGATTTTGGTAACCATCATCATGGGTAAAGTTTCAGCAGTGGTTTACACGACACCAAAGAGTTAAGTTTAAAGAGGAAACGAGTGAGTTGTACACTTATAGAATGGTATTACTTTGTTTTAAGGACTTGTGAATGGTCTATATGTTTTCTTCTTAAAGTTTAAGATTTAATTTTTTTTATTGCGTATTTTAATGAGTTTGGTCTCATATAAAGGTTATTTCTATTGAGTCTTTGAGTGTTTTCTGTATGCATGAATTAACAATCCTGTTTAGAACGTGTCTTTGAAGTTATGTTGCTTCACTCCCTCTCTTCATCCTTTACAGATTCCTTTAATCTCTGTTTCTTAATTTAAGTGTAGTATTTCTGAAGGTGATATTCTCAAATGGCAAAGAAGAGGAAGCATAGTGAGACAGTGCCGACGGTATCGGTTAAGAAGGACGAAAATGCTCTGGAGAGACCCAAGCGGACACTCATGGGTTGGAAAGACAAAGAAGTGACAAAAAAAAGTGAAGCTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTGGTCACCTGTTCCCGCCGAATCAATTTTAGGTATGTAATATAGTTGGAACAAGTTGGTGTAGCTTTTTGTAAAATCTATTATTAGGTCTATACAGGGTCAGGTTGTTTGCATGTAACTTATCACTCATTAACCAAATGTTTTTAGTTTTTATTTATTTATTCTTCCCTTTAGAATTTTTGGCAATTTAACTTGTGGTTGGTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACATTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCAAGCCTATTTTTTGAGGTTAGAACCTTTACATTGCACTGTCCATGTCTAAACTTGGAATTCAATTCGTAATCTGGAATCTTTAAGGTAAAATGTTTTCTAATTTTTATTTTTTATTAGACTTAGGATGATGACTTTTTGGTTTTCTTATTGTGGTATAAATTATAAGGATGTTTTAACTATCCTTTTGCTTTTCATTTTATTACTTTCCTATATGCCTTCTCAGCATGTTTGTACATTGCGATCACATCACTTGTTTTTCCACTCACTGATCTTTTTCTCTCCAACTCCAGTGCAGAAAACATAAAGATCTTTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGGTAATTTTAACTTGTATTCAAAAGTTTATTACTGGGTAACTAAAACTTTATTTGATTTCTTTATAAATGAAGTTTTCTTATTTCTTCATTTTTTTTGCTTTCAGTGCATACAATGGAAGAATTTTTTTTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATGATTATTCAGGTACCAATGGCAAGTTTTGTCTTTAACAATTAATTGTTGAAAGTTCAAACTATTTTTCATTCTTACTCGTGGATCAGTGTATGAGGCAAATGTCAGTTTCCTTATCTTTCTTCATTAAATGCATTTTGCGCTCCTTTCCTTGCTCCTTCTATCCAAAGCAAACATCGTATTGAATTGATCAAATATTGTCTGCGTGACTGTAGTCGAATTATCTTCTTTCAGGTTTTTCTTATGGAAAAAAATAAATAAAAGATATCCGTGAATGCACTTCTTTCACGTAATATGGCATAAGAATATGGATTAATGAATACTTGTGCTCATTCTCACATGTCGGTGCCTCACCACTATCATTTTTCTTTCATGCTGCCTTTATTTGTTTCCTATTAATGTCCGGTTTCACATATGCATAGTTACTATGTTATGAAAAGTATGTAGATCCTAGCTGCTTATCCAAATAATGGCATTTTTGAAAACTAATCCTATTAAATCTTGTTTTACATGACATAGTTTTATCTCACCAATGTGATTTTCTCTCAGATTTTTGGAACTCCTAAGGAGCATCGACATTCTAAACCATACCATGATCATGTATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCCGGAATTACCAGGTATGCTTTATTTATTTTCTACTTGCTACAGAATTTAATGCTAATCGTGGATAGCATCCAAAAGTACAACGTCCACCTGACACCCAAACAATGCACTGGATGCTGTCTTTTTTCTAAGTGTTTGCTCACCACACTTTTCCATGAAGTGGCATATGAATGCAGAGAAATATATTCTACTTTGTGTTAGGCAAAGACATTGGAAAGACTTTTAGGAGTCGTTGGTATAAATGTCAAGTATTTATTATGATATTGGAAGTATATTAGTCATTAGCTAAGGGGGGTTGTCAATGAATTGTTACACTTCGGAGAAAGACTATGATAAGAGCTTAGATACGTACAAGTAAAGAAACAATCCTCTAACTTCAGATTTAATGACCAAGATTTTGTTCAGAGAAAAAATAAACAATGCTCTATTTTTAGAGGAAATGGCCTAGGCTTCATTAATAATATTGGTGAGAAGTTCCTTGACCGGAGATTATGGCCATTGTATATGACTAATGCCGGAACCCTCAACTTTTCGGGGGCATGGACAGTAATGAGAGGAGGGTTTACCACTTCATTGAAACATTATGGGTTGGAGAGGATGCATTAAAAAAATGGAAGAAATGTGATTTGGGCGAATGTAAATGCCGTCACTATCTTCAGCAGAATATGCTAGGACTTTCTCTCTTGCTGGATCAGTTACCTTTCTGTTTCTTTTTTATTCCTTTGATTTCTAAACAATAGTCGGTATTTTAAGTTTGGGTGCCTATTTTAAAGGTGTAGCATGAGTAGGAAGTATGGGGAGTTCGCATAACCATCACTCCATTAGCTACACCACCTGAGGAACAATGTGTGTTTTTAGTGAAGTACGTTAAGGAATATGTGGATAAATGTCAGAAGTATCGTCCTTAAGATATGAGGGGTACAATCGTCATTGGAAAGGAATCTGGCATGGTAAAAAATTAATTAATTTGAAGAGTTTGAGATTGAGATTTTGGGGGATAGTTTTTAGGAGAGGACTAGTTGGAATCTTGCCATTTTTCTTTCTTGTGTTAATGATTTCATTGTTTTTCTAGTCCACTGTATACATTTTCATATAATTGATTGTTATCCTTTAAACTTACATGTTCACTTTTCCATCGACTGTTGGTATGTTTGTTCTTGTTTGGGGTTTGTGTCGGTGTGACCTATTACCCAACCCATTATTTAATGATATGGTGCTTGTCTTCTTTGTTTGATGTGATCAGATATCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTATTCAAATTCCACTTCCTGTTTAGTTTATAAGTGGGTTTTCATAATTTTCTTCATGGACTTCAAATATTTGCATTTTACAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACACTATATGAGAACCCACTTTATGTATCGCCAAACCAGGTTAGATTATCCAACTTTTTGGTTATTTGGGATTACACTTCTTCACACTATCCTTTTAAATTTGGGTTACAAAAACAGCTGAGAATTTACATTTGCATCAGTTATATCCAAAAGAAAACTACGACCTGGTTCTGTTCTATGAATTCTGAAATAAAGAAGAGAAAACCATACATTGAGGACACATTATCTATGTTTTTCCAGTTTCTTTTAAGTTCATATTTGACCATAGATTTAAGTATTGGAATTACGCAAAAGCCCAAGTAATCACTATCTTTTTCAATTCAAGGTTTTTTGTGATTCCAACTATAGTCTCACTAATTGTATGATGAAACTAGTAGTATTTTTTGTAATCCTTTGGATTGGATGTCATATTTTGTAAACTTTGTCGACGTTATTCATGTCGCTTTGTAGATTCGAGCGTTGGAGAAGAAACAAAAGGCCGGAAAATACTCGAAGAAAGTCAAAGCGAAAACAAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAATAGTAGTATTTCGATGGACAGTTTTATCCGCGACTCAAAATCATAATTCCTTGCCTCCAATGAAATGGGATTTTGTTCTATAATACTAGTAAGTGTAATGCAAATTTTGTCCTGGTTTATTTAAAAACCTCGAGGTGTATGTTTCTCTTTCTTCAATGTATCTCTTAGTCGAATACTTGGAGTTTTAGCTGTGATTTTACAAGATCAAAGGGCATCTCATATGTTTTACTTTATGTTACCAAAGAATAGTTCCGAATGAAGACGCA

mRNA sequence

AAGATTTTGACTTTGTAAAAAGAAAAACTCTCTGCCGCTTCTCTCCCTCTCTTTCTGATCACTTCTCCACTCTCGTCCTCTTCATCCGGCCACCGCGCCGCCGATCATCTGGAAAGCTTTTGAGTTCTCTTCGTTTCTCTTTTCCACTCACTCTCGGTTTCTCTTCCCCTCACTGCTCGCCTGGTAGACGGTATTTCTGAAGGTGATATTCTCAAATGGCAAAGAAGAGGAAGCATAGTGAGACAGTGCCGACGGTATCGGTTAAGAAGGACGAAAATGCTCTGGAGAGACCCAAGCGGACACTCATGGGTTGGAAAGACAAAGAAGTGACAAAAAAAAGTGAAGCTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTGGTCACCTGTTCCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACATTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCAAGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTTTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTTTTTTTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATGATTATTCAGATTTTTGGAACTCCTAAGGAGCATCGACATTCTAAACCATACCATGATCATGTATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCCGGAATTACCAGATATCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACACTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCGTTGGAGAAGAAACAAAAGGCCGGAAAATACTCGAAGAAAGTCAAAGCGAAAACAAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAATAGTAGTATTTCGATGGACAGTTTTATCCGCGACTCAAAATCATAATTCCTTGCCTCCAATGAAATGGGATTTTGTTCTATAATACTAGTAAGTGTAATGCAAATTTTGTCCTGGTTTATTTAAAAACCTCGAGGTGTATGTTTCTCTTTCTTCAATGTATCTCTTAGTCGAATACTTGGAGTTTTAGCTGTGATTTTACAAGATCAAAGGGCATCTCATATGTTTTACTTTATGTTACCAAAGAATAGTTCCGAATGAAGACGCA

Coding sequence (CDS)

ATGGCAAAGAAGAGGAAGCATAGTGAGACAGTGCCGACGGTATCGGTTAAGAAGGACGAAAATGCTCTGGAGAGACCCAAGCGGACACTCATGGGTTGGAAAGACAAAGAAGTGACAAAAAAAAGTGAAGCTGGTTCTGATCATGCTGTTTTTCGAAATAAAGAAAAGGTTCTGGTCACCTGTTCCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACATTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCAAGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTTTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTTTTTTTGAAGCTTACAGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATGATTATTCAGATTTTTGGAACTCCTAAGGAGCATCGACATTCTAAACCATACCATGATCATGTATTTGTTTTCTCTATTGTTGATGACCATATCTGGTTCCGGAATTACCAGATATCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGCAGTTTTGGAGGTCCTACACTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCGTTGGAGAAGAAACAAAAGGCCGGAAAATACTCGAAGAAAGTCAAAGCGAAAACAAGGAGGAAGATGCACGAGTTATCGAATCCATTGGAACCTGACGAGTTTGCTGATATGTGGAAGGAATAG

Protein sequence

MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE*

Homology

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BLAST of MELO3C015338 vs. Swiss-Prot
Match: BRX1_HUMAN (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens GN=BRIX1 PE=1 SV=2)

HSP 1 Score: 248.4 bits (633), Expect = 1.0e-64
Identity = 138/318 (43.40%), Postives = 192/318 (60.38%), Query Frame = 1


Query: 3   KKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSD--HAVFRNKEKVLVT 62
           +KR+    V     K++E   E P +     ++ E  ++           ++NKE++L+ 
Sbjct: 6   RKRRGGFAVQAKKPKRNEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIF 65

Query: 63  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 122
            SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +
Sbjct: 66  SSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQ 125

Query: 123 DLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 182
           DLY+W++  P GPS KFLV  +HT+ E  LK+TGN LKGSRP+L+F   FD+  H+ LLK
Sbjct: 126 DLYMWLSNSPHGPSAKFLVQNIHTLAE--LKMTGNCLKGSRPLLSFDPAFDELPHYALLK 185

Query: 183 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 242
           E++IQIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L
Sbjct: 186 ELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AAL 245

Query: 243 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 302
           +E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+
Sbjct: 246 VEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVKDVQKL 305

Query: 303 H--ELSNPLEPDEFADMW 317
              E    L  D  AD++
Sbjct: 306 RKKEPKTLLPHDPTADVF 307

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BLAST of MELO3C015338 vs. Swiss-Prot
Match: BRX1_RAT (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus GN=Brix1 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.0e-64
Identity = 141/323 (43.65%), Postives = 190/323 (58.82%), Query Frame = 1


Query: 3   KKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDH-------AVFRNKE 62
           +KR+    V     KK+     +P       K  +V K++E   D          ++NKE
Sbjct: 6   RKRRGDLEVQAKKPKKNRKDAGQPA------KQADVAKEAEEEKDRIPGPVCKGKWKNKE 65

Query: 63  KVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFE 122
           ++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE
Sbjct: 66  RILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFE 125

Query: 123 CRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVH 182
            +K +DLY+W++  P GPS KFLV  +HT+ E  LK+TGN LKGSRP+L+F   FD   H
Sbjct: 126 AKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAE--LKMTGNCLKGSRPLLSFDPAFDDLPH 185

Query: 183 WKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGL 242
           + LLKE +IQIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D       
Sbjct: 186 YALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED------- 245

Query: 243 DKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKK--VK 302
               L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K  VK
Sbjct: 246 --AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVVRSITAAKYREKQQVK 305

Query: 303 AKTRRKMHELSNPLEPDEFADMW 317
              + +  E    L  D  AD++
Sbjct: 306 DVQKSRKKEPKTILPHDPTADVF 306

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BLAST of MELO3C015338 vs. Swiss-Prot
Match: BRX1_PONAB (Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-64
Identity = 137/318 (43.08%), Postives = 191/318 (60.06%), Query Frame = 1


Query: 3   KKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSD--HAVFRNKEKVLVT 62
           +KR+    V     K++E   E P +     ++ E  ++           ++NKE++L+ 
Sbjct: 6   RKRRGGFAVQAKKPKRNEKDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIF 65

Query: 63  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 122
            SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +
Sbjct: 66  SSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQ 125

Query: 123 DLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 182
           DLY+W++  P GPS KFLV  +HT+ E  LK+TGN LKGSRP+L+F   FD+  H+ LLK
Sbjct: 126 DLYMWLSNSPHGPSAKFLVQNIHTLAE--LKMTGNCLKGSRPLLSFDPAFDELPHYALLK 185

Query: 183 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 242
           E++IQI  TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D           L
Sbjct: 186 ELLIQILSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED---------AAL 245

Query: 243 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 302
           +E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K  +K+
Sbjct: 246 VEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVTRSITAAKYREKQQVKDVQKL 305

Query: 303 H--ELSNPLEPDEFADMW 317
              E    L  D  AD++
Sbjct: 306 RKKEPKTLLPHDPTADVF 307

[Close]

BLAST of MELO3C015338 vs. Swiss-Prot
Match: BRX1_BOVIN (Ribosome biogenesis protein BRX1 homolog OS=Bos taurus GN=BRIX1 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-64
Identity = 130/268 (48.51%), Postives = 175/268 (65.30%), Query Frame = 1


Query: 51  FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 110
           ++NKE++L+  SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+ 
Sbjct: 56  WKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNK 115

Query: 111 SLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNF 170
            ++FE +K +DLY+W++  P GPS KFLV  +HT+ E  LK+TGN LKGSRP+L+F   F
Sbjct: 116 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAE--LKMTGNCLKGSRPLLSFDPAF 175

Query: 171 DKDVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKV 230
           D+  H+ LLKE++IQIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D  
Sbjct: 176 DELPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED-- 235

Query: 231 ARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSK 290
                    L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +
Sbjct: 236 -------AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYRE 295

Query: 291 KVKAKTRRKMH--ELSNPLEPDEFADMW 317
           K + K  +K+   E    L  D  AD++
Sbjct: 296 KQQVKDVQKLRKKEPKTILPHDPTADVF 307

[Close]

BLAST of MELO3C015338 vs. Swiss-Prot
Match: BRX1_XENLA (Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis GN=brix1 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.3e-64
Identity = 127/265 (47.92%), Postives = 174/265 (65.66%), Query Frame = 1


Query: 51  FRNKEKVLVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSS 110
           ++NKE+VL+  SR INFR RHLM ++ SL+PH + + K++ R  K   +NE+ E+K C+ 
Sbjct: 49  WKNKERVLIFSSRGINFRTRHLMQDLRSLMPHSRAETKMD-RKDKLFVVNEVCEMKNCNK 108

Query: 111 SLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNF 170
            ++FE +K +DLY+W++  P GPS KFLV  +HT+ E  LK++GN LKGSRPIL+F   F
Sbjct: 109 CIYFEAKKKQDLYMWLSNSPEGPSAKFLVQNIHTLAE--LKMSGNCLKGSRPILSFDPAF 168

Query: 171 DKDVHWKLLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKV 230
           D++  + LLKE++ QIFGTP+ H  S+P+ DH+F FSI D+ IWFRNYQI     E D  
Sbjct: 169 DREPQYALLKELLTQIFGTPRYHPRSQPFVDHIFTFSIADNRIWFRNYQII----EED-- 228

Query: 231 ARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSK 290
                    L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A K  +
Sbjct: 229 -------AALVEIGPRFVLNLIKIFKGSFGGPTLYENPHYQSPNMHRRMIRLATAAKVKE 288

Query: 291 KVKAKTRRKMHELSN----PLEPDE 312
           K + K  +K+ +  +    P++P E
Sbjct: 289 KQQVKEVQKLKKEEDRPVIPVDPTE 297

[Close]

BLAST of MELO3C015338 vs. TrEMBL
Match: A0A0B0NEE6_GOSAR (Ribosome biogenesis BRX1 OS=Gossypium arboreum GN=F383_18642 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-159
Identity = 275/320 (85.94%), Postives = 296/320 (92.50%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKE-VTKKSEAGSDHA-VFRNKEKVL 60
           M KKRKHSET      KKDE A ERPKR+L GWKDKE V +++E+ +D   VFRNKEKV+
Sbjct: 1   MGKKRKHSETQTAEPKKKDEAAPERPKRSLFGWKDKEEVQQQTESNTDPPQVFRNKEKVM 60

Query: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRIN+RYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNEL+EL+GCSS+LFFECRK
Sbjct: 61  VTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELIELRGCSSALFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKL 180
           H+DLYLWMA+CP+GPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFSSNF+KD HWKL
Sbjct: 121 HQDLYLWMARCPNGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSSNFEKDAHWKL 180

Query: 181 LKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKM 240
           LKEMIIQIFGTPKEHR SKPYHDHVFVFSI DDHIWFRNYQISVPHNESDK+ RGGLDKM
Sbjct: 181 LKEMIIQIFGTPKEHRKSKPYHDHVFVFSIADDHIWFRNYQISVPHNESDKMVRGGLDKM 240

Query: 241 TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRR 300
           TL+EVGPRFCLNPIKIF GSFGGPTLYENP YVSPNQIRALEK+QKAGKY+KKVKAKTRR
Sbjct: 241 TLVEVGPRFCLNPIKIFAGSFGGPTLYENPFYVSPNQIRALEKRQKAGKYAKKVKAKTRR 300

Query: 301 KMHELSNPLEPDEFADMWKE 319
           KMHELSNPLEPDEFADMW+E
Sbjct: 301 KMHELSNPLEPDEFADMWRE 318

[Close]

BLAST of MELO3C015338 vs. TrEMBL
Match: A0A0D2PI01_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G319600 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-159
Identity = 275/320 (85.94%), Postives = 296/320 (92.50%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKE-VTKKSEAGSDHA-VFRNKEKVL 60
           M KKRKHSET      KKDE A ERPKR+L GWKDKE V +++E+ +D   VFRNKEKV+
Sbjct: 1   MGKKRKHSETQTAEPKKKDEAAPERPKRSLFGWKDKEEVQQQTESNTDPPQVFRNKEKVM 60

Query: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRIN+RYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNEL+EL+GCSS+LFFECRK
Sbjct: 61  VTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELIELRGCSSALFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKL 180
           H+DLYLWMA+CP+GPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFSSNF+KD HWKL
Sbjct: 121 HQDLYLWMARCPNGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSSNFEKDAHWKL 180

Query: 181 LKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKM 240
           LKEMIIQIFGTPKEHR SKPYHDHVFVFSI DDHIWFRNYQISVPHNESDK+ RGGLDKM
Sbjct: 181 LKEMIIQIFGTPKEHRKSKPYHDHVFVFSIADDHIWFRNYQISVPHNESDKMVRGGLDKM 240

Query: 241 TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRR 300
           TL+EVGPRFCLNPIKIF GSFGGPTLYENP YVSPNQIRALEK+QKAGKY+KKVKAKTRR
Sbjct: 241 TLVEVGPRFCLNPIKIFAGSFGGPTLYENPFYVSPNQIRALEKRQKAGKYAKKVKAKTRR 300

Query: 301 KMHELSNPLEPDEFADMWKE 319
           KMHELSNPLEPDEFADMW+E
Sbjct: 301 KMHELSNPLEPDEFADMWRE 318

[Close]

BLAST of MELO3C015338 vs. TrEMBL
Match: A0A061F737_THECC (Ribosome biogenesis protein brix, putative OS=Theobroma cacao GN=TCM_031378 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 8.5e-159
Identity = 275/321 (85.67%), Postives = 293/321 (91.28%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKE-VTKKSEAGSDHA--VFRNKEKV 60
           M KKRK SET       KDE A ERPKRTL+GWKDKE V K++E+  D +  VFRNKEKV
Sbjct: 1   MGKKRKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKV 60

Query: 61  LVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECR 120
           +VTCSRRIN+RYRHLMLNMVSLLPHCKKDNKVES+SSKGATLNEL+EL GCSS LFFECR
Sbjct: 61  MVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSGCSSCLFFECR 120

Query: 121 KHKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWK 180
           KH+DLYLWMAK PSGPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFS NF+KD HWK
Sbjct: 121 KHQDLYLWMAKSPSGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSGNFEKDAHWK 180

Query: 181 LLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240
           LLKEMI+QIFGTPKEHR SKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDK+ RGGLDK
Sbjct: 181 LLKEMIMQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKMVRGGLDK 240

Query: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300
           MTL+EVGPRFCLNPIKIFGGSFGGPTLYENP YVSPNQIRALEK+QKAGKY+KKVKAKTR
Sbjct: 241 MTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEKRQKAGKYAKKVKAKTR 300

Query: 301 RKMHELSNPLEPDEFADMWKE 319
           RKMHELSNPLEPDEFADMW+E
Sbjct: 301 RKMHELSNPLEPDEFADMWRE 319

[Close]

BLAST of MELO3C015338 vs. TrEMBL
Match: B9HZX2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12280g PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 5.5e-158
Identity = 272/319 (85.27%), Postives = 292/319 (91.54%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDH-AVFRNKEKVLV 60
           M KKRKHSET      KKDE+  ERPKRTL+GWKDK   K++E+   H   FRNKEKVLV
Sbjct: 1   MGKKRKHSETQVIEPAKKDESETERPKRTLLGWKDKPEEKETESLPPHQGGFRNKEKVLV 60

Query: 61  TCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKH 120
           TCSRRIN+RYRHLMLN+VSLLPHCKKD+KVES SSKGATLNELVELK CSSSLFFECRKH
Sbjct: 61  TCSRRINYRYRHLMLNLVSLLPHCKKDSKVESTSSKGATLNELVELKNCSSSLFFECRKH 120

Query: 121 KDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLL 180
           KDLYLWM KCPSGPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFS+NFDKD HWKLL
Sbjct: 121 KDLYLWMVKCPSGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSANFDKDAHWKLL 180

Query: 181 KEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMT 240
           KEMIIQIFG PK+HR SKP++DHVFVFSIVDDHIWFRNYQISVPHNE+DK+ARGGLDKMT
Sbjct: 181 KEMIIQIFGIPKDHRKSKPFYDHVFVFSIVDDHIWFRNYQISVPHNETDKMARGGLDKMT 240

Query: 241 LIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRK 300
           L+EVGPRFCLNPIKIFGGSFGGPTLYENP ++SPNQIRALEKKQKAGK++KKVKAKTRRK
Sbjct: 241 LVEVGPRFCLNPIKIFGGSFGGPTLYENPFFISPNQIRALEKKQKAGKFAKKVKAKTRRK 300

Query: 301 MHELSNPLEPDEFADMWKE 319
           MHELSNPLEPDEFADMWKE
Sbjct: 301 MHELSNPLEPDEFADMWKE 317

[Close]

BLAST of MELO3C015338 vs. TrEMBL
Match: A0A067JSR7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22878 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 1.6e-157
Identity = 275/318 (86.48%), Postives = 288/318 (90.57%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60
           M KKRK SET  T   KKDE+A ERP+RTL+GWKD     K    ++  VFRNKEKVLVT
Sbjct: 1   MGKKRKISETEVTAPSKKDESAPERPQRTLLGWKDNGSEVKE---TETQVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRIN+RYRHLMLN+VSLLPHCKKDNKVES+SSKG  LNELVELK CSS LFFECRKHK
Sbjct: 61  CSRRINYRYRHLMLNVVSLLPHCKKDNKVESKSSKGMALNELVELKSCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSSNFDKDDHWKLLK 180

Query: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240
           EMIIQIFGTPKEHR SKPYHDHVFVFSI DDHIWFRNYQISVPHNESDKVARGGLDKMTL
Sbjct: 181 EMIIQIFGTPKEHRKSKPYHDHVFVFSIADDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           +EVGPRFCLNPIKIFGGSFGGPTLYENP YVSPNQIRALEKKQKAGKY+KKVKAK RRKM
Sbjct: 241 VEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEKKQKAGKYAKKVKAKKRRKM 300

Query: 301 HELSNPLEPDEFADMWKE 319
           HE+SNPLEPDEFADMW+E
Sbjct: 301 HEMSNPLEPDEFADMWRE 313

[Close]

BLAST of MELO3C015338 vs. TAIR10
Match: AT3G15460.1 (AT3G15460.1 Ribosomal RNA processing Brix domain protein)

HSP 1 Score: 536.2 bits (1380), Expect = 1.4e-152
Identity = 257/318 (80.82%), Postives = 281/318 (88.36%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60
           M +KRKHSETV    VK  ++A ERP+RTL+GWKDK+   ++   +  +VFRNKEKVLVT
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           DLY+WM K P GPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFSSNF+ D HWKLLK
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSSNFENDAHWKLLK 180

Query: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240
           EM+ QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDK+ARG LDKMTL
Sbjct: 181 EMLTQIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGDLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKAKTRRKM 300

Query: 301 HELSNPLEPDEFADMWKE 319
           HELSNPLEPDEF DMW +
Sbjct: 301 HELSNPLEPDEFTDMWND 314

[Close]

BLAST of MELO3C015338 vs. TAIR10
Match: AT1G52930.1 (AT1G52930.1 Ribosomal RNA processing Brix domain protein)

HSP 1 Score: 530.4 bits (1365), Expect = 7.6e-151
Identity = 255/320 (79.69%), Postives = 283/320 (88.44%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKK-DENALERPKRTLMGWKDKEVTKKSEAGS-DHAVFRNKEKVL 60
           M +KRKHSET     VKK DE A +RPKRTL+GWKDK   +  +A +   + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRI+FRYR LMLN+VSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKL 180
           HKDLY+WM K P+GPSVKFLV AVH MEE  +KLTGNHLKGSRP+LTFSSNFDKD HWKL
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEE--MKLTGNHLKGSRPLLTFSSNFDKDAHWKL 180

Query: 181 LKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKM 240
           LKEM+ Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQISVPHNESDK+A+GGLDKM
Sbjct: 181 LKEMLTQVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAKGGLDKM 240

Query: 241 TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRR 300
           TLIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+KAKTR+
Sbjct: 241 TLIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKIKAKTRK 300

Query: 301 KMHELSNPLEPDEFADMWKE 319
           KMHELSNPLEPDEFADMWK+
Sbjct: 301 KMHELSNPLEPDEFADMWKD 318

[Close]

BLAST of MELO3C015338 vs. NCBI nr
Match: gi|659099573|ref|XP_008450669.1| (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo])

HSP 1 Score: 649.0 bits (1673), Expect = 4.2e-183
Identity = 316/318 (99.37%), Postives = 316/318 (99.37%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60
           MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEE  LKLTGNHLKGSRPILTFSSNFDKDVHWKLLK
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180

Query: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240
           EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL
Sbjct: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELSNPLEPDEFADMWKE 319
           HELSNPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of MELO3C015338 vs. NCBI nr
Match: gi|778662534|ref|XP_011659901.1| (PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BRX1-like [Cucumis sativus])

HSP 1 Score: 617.1 bits (1590), Expect = 1.8e-173
Identity = 301/318 (94.65%), Postives = 309/318 (97.17%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60
           MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+ E GSDHAVFRNKEKVL+T
Sbjct: 1   MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKEIEVGSDHAVFRNKEKVLIT 60

Query: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           DLYL MAKCPSGPSVKFLVNA+HTMEE  LKLTGNHLKGSRPILTFSSNFDKDVH KLLK
Sbjct: 121 DLYLCMAKCPSGPSVKFLVNAMHTMEE--LKLTGNHLKGSRPILTFSSNFDKDVHXKLLK 180

Query: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240
           EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL
Sbjct: 181 EMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMTL 240

Query: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300
           IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM
Sbjct: 241 IEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKM 300

Query: 301 HELSNPLEPDEFADMWKE 319
           HELSNPLEPDEFADMWKE
Sbjct: 301 HELSNPLEPDEFADMWKE 316

[Close]

BLAST of MELO3C015338 vs. NCBI nr
Match: gi|823198009|ref|XP_012434459.1| (PREDICTED: ribosome biogenesis protein BRX1 [Gossypium raimondii])

HSP 1 Score: 570.5 bits (1469), Expect = 1.9e-159
Identity = 275/320 (85.94%), Postives = 296/320 (92.50%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKE-VTKKSEAGSDHA-VFRNKEKVL 60
           M KKRKHSET      KKDE A ERPKR+L GWKDKE V +++E+ +D   VFRNKEKV+
Sbjct: 1   MGKKRKHSETQTAEPKKKDEAAPERPKRSLFGWKDKEEVQQQTESNTDPPQVFRNKEKVM 60

Query: 61  VTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           VTCSRRIN+RYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNEL+EL+GCSS+LFFECRK
Sbjct: 61  VTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELIELRGCSSALFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKL 180
           H+DLYLWMA+CP+GPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFSSNF+KD HWKL
Sbjct: 121 HQDLYLWMARCPNGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSSNFEKDAHWKL 180

Query: 181 LKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKM 240
           LKEMIIQIFGTPKEHR SKPYHDHVFVFSI DDHIWFRNYQISVPHNESDK+ RGGLDKM
Sbjct: 181 LKEMIIQIFGTPKEHRKSKPYHDHVFVFSIADDHIWFRNYQISVPHNESDKMVRGGLDKM 240

Query: 241 TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRR 300
           TL+EVGPRFCLNPIKIF GSFGGPTLYENP YVSPNQIRALEK+QKAGKY+KKVKAKTRR
Sbjct: 241 TLVEVGPRFCLNPIKIFAGSFGGPTLYENPFYVSPNQIRALEKRQKAGKYAKKVKAKTRR 300

Query: 301 KMHELSNPLEPDEFADMWKE 319
           KMHELSNPLEPDEFADMW+E
Sbjct: 301 KMHELSNPLEPDEFADMWRE 318

[Close]

BLAST of MELO3C015338 vs. NCBI nr
Match: gi|729347491|ref|XP_010542279.1| (PREDICTED: ribosome biogenesis protein BRX1-like [Tarenaya hassleriana])

HSP 1 Score: 568.9 bits (1465), Expect = 5.5e-159
Identity = 276/319 (86.52%), Postives = 295/319 (92.48%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDK-EVTKKSEAGSDHAVFRNKEKVLV 60
           M KKRKHSET      KK+E+A ERPKRTL+GWKDK EV  KS+  S  +VFRNKEKVLV
Sbjct: 1   MGKKRKHSETEAPAPAKKNEDAPERPKRTLLGWKDKNEVAVKSDPSSS-SVFRNKEKVLV 60

Query: 61  TCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKH 120
           TCSRRINFRYRHLMLNMVSLLPHCKKD+KVE++SSKGATLNELVELKGCSS LFFECRKH
Sbjct: 61  TCSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSKGATLNELVELKGCSSCLFFECRKH 120

Query: 121 KDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWKLL 180
           +DLYLWM K P GPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFSSNF+KDVHWKLL
Sbjct: 121 QDLYLWMVKSPQGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSSNFEKDVHWKLL 180

Query: 181 KEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDKMT 240
           KEM+IQIFGTPKEHR SKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDK+ARGGLDKMT
Sbjct: 181 KEMLIQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGGLDKMT 240

Query: 241 LIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRK 300
           L+EVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRA+EK+ KAGK++KKVKAKTRRK
Sbjct: 241 LVEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRAMEKRNKAGKFAKKVKAKTRRK 300

Query: 301 MHELSNPLEPDEFADMWKE 319
           MHELSNPLEPDEFA MWK+
Sbjct: 301 MHELSNPLEPDEFAGMWKD 316

[Close]

BLAST of MELO3C015338 vs. NCBI nr
Match: gi|590608740|ref|XP_007021346.1| (Ribosome biogenesis protein brix, putative [Theobroma cacao])

HSP 1 Score: 567.8 bits (1462), Expect = 1.2e-158
Identity = 275/321 (85.67%), Postives = 293/321 (91.28%), Query Frame = 1


Query: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKE-VTKKSEAGSDHA--VFRNKEKV 60
           M KKRK SET       KDE A ERPKRTL+GWKDKE V K++E+  D +  VFRNKEKV
Sbjct: 1   MGKKRKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKV 60

Query: 61  LVTCSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECR 120
           +VTCSRRIN+RYRHLMLNMVSLLPHCKKDNKVES+SSKGATLNEL+EL GCSS LFFECR
Sbjct: 61  MVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSGCSSCLFFECR 120

Query: 121 KHKDLYLWMAKCPSGPSVKFLVNAVHTMEEFFLKLTGNHLKGSRPILTFSSNFDKDVHWK 180
           KH+DLYLWMAK PSGPSVKFLVNAVHTMEE  LKLTGNHLKGSRP+LTFS NF+KD HWK
Sbjct: 121 KHQDLYLWMAKSPSGPSVKFLVNAVHTMEE--LKLTGNHLKGSRPLLTFSGNFEKDAHWK 180

Query: 181 LLKEMIIQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGGLDK 240
           LLKEMI+QIFGTPKEHR SKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDK+ RGGLDK
Sbjct: 181 LLKEMIMQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKMVRGGLDK 240

Query: 241 MTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTR 300
           MTL+EVGPRFCLNPIKIFGGSFGGPTLYENP YVSPNQIRALEK+QKAGKY+KKVKAKTR
Sbjct: 241 MTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEKRQKAGKYAKKVKAKTR 300

Query: 301 RKMHELSNPLEPDEFADMWKE 319
           RKMHELSNPLEPDEFADMW+E
Sbjct: 301 RKMHELSNPLEPDEFADMWRE 319

The following BLAST results are available for this feature:

BLAST of MELO3C015338 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BRX1_HUMAN	1.0e-64	43.40	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens GN=BRIX1 PE=1 SV=2	[more]
BRX1_RAT	1.0e-64	43.65	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus GN=Brix1 PE=2 SV=1	[more]
BRX1_PONAB	1.3e-64	43.08	Ribosome biogenesis protein BRX1 homolog OS=Pongo abelii GN=BRIX1 PE=2 SV=1	[more]
BRX1_BOVIN	1.7e-64	48.51	Ribosome biogenesis protein BRX1 homolog OS=Bos taurus GN=BRIX1 PE=2 SV=1	[more]
BRX1_XENLA	2.3e-64	47.92	Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis GN=brix1 PE=2 SV=1	[more]

BLAST of MELO3C015338 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0B0NEE6_GOSAR	1.3e-159	85.94	Ribosome biogenesis BRX1 OS=Gossypium arboreum GN=F383_18642 PE=4 SV=1	[more]
A0A0D2PI01_GOSRA	1.3e-159	85.94	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G319600 PE=4 SV=1	[more]
A0A061F737_THECC	8.5e-159	85.67	Ribosome biogenesis protein brix, putative OS=Theobroma cacao GN=TCM_031378 PE=4...	[more]
B9HZX2_POPTR	5.5e-158	85.27	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12280g PE=4 SV=1	[more]
A0A067JSR7_JATCU	1.6e-157	86.48	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22878 PE=4 SV=1	[more]

BLAST of MELO3C015338 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15460.1	1.4e-152	80.82	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	7.6e-151	79.69	Ribosomal RNA processing Brix domain protein	[more]

BLAST of MELO3C015338 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099573\|ref\|XP_008450669.1\|	4.2e-183	99.37	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo]	[more]
gi\|778662534\|ref\|XP_011659901.1\|	1.8e-173	94.65	PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis protein BRX1-like [Cucumis s...	[more]
gi\|823198009\|ref\|XP_012434459.1\|	1.9e-159	85.94	PREDICTED: ribosome biogenesis protein BRX1 [Gossypium raimondii]	[more]
gi\|729347491\|ref\|XP_010542279.1\|	5.5e-159	86.52	PREDICTED: ribosome biogenesis protein BRX1-like [Tarenaya hassleriana]	[more]
gi\|590608740\|ref\|XP_007021346.1\|	1.2e-158	85.67	Ribosome biogenesis protein brix, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004154	Anticodon-bd
IPR007109	Brix
IPR026532	BRX1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0000027	ribosomal large subunit assembly
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups
molecular_function	GO:0003723	RNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50721	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015338T1	MELO3C015338T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50721	MU50721	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004154	Anticodon-binding	unknown	SSF52954	Class II aaRS ABD-related	coord: 56..257 score: 2.94
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 62..253 score: 3.1
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 58..254 score: 4.0
IPR007109	Brix domain	PROFILE	PS50833	BRIX	coord: 55..260 score: 30
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 2..318 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015338	Csa1G570210	Cucumber (Chinese Long) v2	cumeB041
MELO3C015338	Cla005250	Watermelon (97103) v1	mewmB271
MELO3C015338	ClCG03G016840	Watermelon (Charleston Gray)	mewcgB245
MELO3C015338	Cla97C03G067190	Watermelon (97103) v2	mewmbB249
MELO3C015338	Bhi02G001671	Wax gourd	mewgoB312
MELO3C015338	CSPI01G26790	Wild cucumber (PI 183967)	cpimeB042
MELO3C015338	CmaCh11G011220	Cucurbita maxima (Rimu)	cmameB122
MELO3C015338	CmoCh11G011570	Cucurbita moschata (Rifu)	cmomeB110
MELO3C015338	Lsi06G001470	Bottle gourd (USVL1VR-Ls)	lsimeB396
MELO3C015338	Cp4.1LG04g00670	Cucurbita pepo (Zucchini)	cpemeB622
MELO3C015338	CsGy1G026020	Cucumber (Gy14) v2	cgybmeB038
MELO3C015338	Carg21147	Silver-seed gourd	carmeB0555
MELO3C015338	CsaV3_1G039130	Cucumber (Chinese Long) v3	cucmeB042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015338	Cucurbita pepo (Zucchini)	cpemeB084
MELO3C015338	Watermelon (97103) v2	mewmbB260
MELO3C015338	Wax gourd	mewgoB294
MELO3C015338	Cucurbita maxima (Rimu)	cmameB068
MELO3C015338	Cucurbita maxima (Rimu)	cmameB151
MELO3C015338	Cucurbita moschata (Rifu)	cmomeB062
MELO3C015338	Cucurbita moschata (Rifu)	cmomeB143