MELO3C015276 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015276
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA polymerase III polC-type
Location	chr2 : 485159 .. 486709 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCTGATATGGGCTTATACATTGTTTGTCACACCCCATTATCTACAGGTTGAAGAAAATTGCTTTCGGTGCTGGATTTTGTTGGGTTTTCTGTCTAGATTTCCTCTTGTTGTGTTGTAAATTTAAATTTTAGCAGCTCCAATGTGCTTTTCAATCTTCCGATTTCCAAAATTTGGAGTCCCTATTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGAAATCATGGTCATAGTTGTTGGTATGATCAACTTTGTTTTAGGATCTATAACCTTGAAGGAGGACAGAACAAGAGATGGACCAGAAAATCTATAACTACCAAAGCGGGGGGGAAAGCAAAGACCAACCCTAGCAGTAAACCCACCAATATTACGAATGAAATCTTGCAGGAATCGATGTCAGCAAGCTGTACAGTTAACGTTAATAAGTCTGAGAAAAGTGGAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCATTCACCCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAGATCCGCAGTGCTATATTACAAATTCAAGCATACATGGCATTACAAACAATATGGTCGCTAGTTGCGGTGTTCCAAGGTATCGAAACGTTCATAGTAGTCTCATTTCTCTTATATCTTCCATTCAGTTCACTGCTAGTTACAGTCATTTATCAATCATATATTTTTATACATATTCAAACGTTCCTTTTCTTGTTCATATAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCCGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGATGTACCCTTTTTACTCCACGAATTCAGCCGTTACTCCATTGATATTCCTCAAGATTGGCTATTTCTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGGTTAGTTTTCCCTTTCCACATATTATCGTGCTCTAGTTTCTCTGTGAATAAAAGGATTGGTGTGAGGTAATCTAATATTGTTGAGGGCAATATCGTGATCAGATTCGAAGATTACGAAAATATCATTAGAAGCACTTTGTGAGTATTACGGTATAGAAGTGGACGGTGAAGCACATCGAGCATTGCCAGATGTGATATCATTGTCTTTGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATGTCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAGAGTGATGAAGCTATGTTTTTGTTGTAATGTTCTTTACTAATTGTTGCAACTTTCTATTCATTCTTATTTGAATAACTTTGGGTCATTTTATTTACGGTCATCAGATCCTTCTTGATGTCCATATTCTCCAAAAACGGGTGAATGAATTGAAATGTCAGGACATAGTTGTTTACAAAGAAATATGAAAGGAAGATCTTT

mRNA sequence

ATCTCTGATATGGGCTTATACATTGTTTGTCACACCCCATTATCTACAGGTTGAAGAAAATTGCTTTCGGTGCTGGATTTTGTTGGGTTTTCTGTCTAGATTTCCTCTTGTTGTGTTGTAAATTTAAATTTTAGCAGCTCCAATGTGCTTTTCAATCTTCCGATTTCCAAAATTTGGAGTCCCTATTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGAAATCATGGTCATAGTTGTTGGTATGATCAACTTTGTTTTAGGATCTATAACCTTGAAGGAGGACAGAACAAGAGATGGACCAGAAAATCTATAACTACCAAAGCGGGGGGGAAAGCAAAGACCAACCCTAGCAGTAAACCCACCAATATTACGAATGAAATCTTGCAGGAATCGATGTCAGCAAGCTGTACAGTTAACGTTAATAAGTCTGAGAAAAGTGGAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCATTCACCCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAGATCCGCAGTGCTATATTACAAATTCAAGCATACATGGCATTACAAACAATATGGTCGCTAGTTGCGGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCCGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGATGTACCCTTTTTACTCCACGAATTCAGCCGTTACTCCATTGATATTCCTCAAGATTGGCTATTTCTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGATTCGAAGATTACGAAAATATCATTAGAAGCACTTTGTGAGTATTACGGTATAGAAGTGGACGGTGAAGCACATCGAGCATTGCCAGATGTGATATCATTGTCTTTGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATGTCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAGAGTGATGAAGCTATGTTTTTGTTGTAATGTTCTTTACTAATTGTTGCAACTTTCTATTCATTCTTATTTGAATAACTTTGGGTCATTTTATTTACGGTCATCAGATCCTTCTTGATGTCCATATTCTCCAAAAACGGGTGAATGAATTGAAATGTCAGGACATAGTTGTTTACAAAGAAATATGAAAGGAAGATCTTT

Coding sequence (CDS)

ATGTGCTTTTCAATCTTCCGATTTCCAAAATTTGGAGTCCCTATTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGAAATCATGGTCATAGTTGTTGGTATGATCAACTTTGTTTTAGGATCTATAACCTTGAAGGAGGACAGAACAAGAGATGGACCAGAAAATCTATAACTACCAAAGCGGGGGGGAAAGCAAAGACCAACCCTAGCAGTAAACCCACCAATATTACGAATGAAATCTTGCAGGAATCGATGTCAGCAAGCTGTACAGTTAACGTTAATAAGTCTGAGAAAAGTGGAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCATTCACCCGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAGATCCGCAGTGCTATATTACAAATTCAAGCATACATGGCATTACAAACAATATGGTCGCTAGTTGCGGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCCGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGATGTACCCTTTTTACTCCACGAATTCAGCCGTTACTCCATTGATATTCCTCAAGATTGGCTATTTCTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGATTCGAAGATTACGAAAATATCATTAGAAGCACTTTGTGAGTATTACGGTATAGAAGTGGACGGTGAAGCACATCGAGCATTGCCAGATGTGATATCATTGTCTTTGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATGTCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAG

Protein sequence

MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRLTFDLKLDVSDLVERAFTPLDLINKKKK*

Homology

[Close]

BLAST of MELO3C015276 vs. Swiss-Prot
Match: DPD1_ARATH (Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.6e-58
Identity = 134/323 (41.49%), Postives = 190/323 (58.82%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           +T   G      SS             +  +  V     E+S T+   + ++Q  + + K
Sbjct: 61  STTTQGSRSNTKSSV------------LGGTVPVTRIIDEESRTKVQPFGNLQQRLAQDK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGI 180
           +    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 181 TNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDI 240
            N+MV    VPRM+ELIPI L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 241 PQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ 300
           P +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 301 RLTFDLKLDVSDLVERAFTPLDL 322
           +LT DLKL +SDLV R  T  D+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of MELO3C015276 vs. Swiss-Prot
Match: DPO3_CLOPE (DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=polC PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.4e-13
Identity = 67/216 (31.02%), Postives = 104/216 (48.15%), Query Frame = 1


Query: 114 PTIIKSKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYIT 173
           P +I   E       + FDIETTGFS   D+I+EI    L  GE   +F T +DP+  I 
Sbjct: 421 PIVINGHEESFDDEYVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIP 480

Query: 174 N--SSIHGITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLH 233
              + +  IT NMV   G P + E++P  ++FV       G  +LVAHNA  FDV F+  
Sbjct: 481 YKITELTSITQNMVN--GQPTIDEVLPKFMEFV-------GNSVLVAHNA-AFDVGFIKK 540

Query: 234 EFSRYSIDIPQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDV 293
                   +      +DT+ LAR L       + K+ L  + ++ GI ++   HRA+ D 
Sbjct: 541 NLMDMGKTLKNP--VMDTVPLARYLY----PDLKKVKLNLVAKHLGISLENH-HRAVDDA 600

Query: 294 ISLSLIL----QRLTFDLKL-DVSDLVERAFTPLDL 322
            + + IL    +++  ++ + DV  L E+  + +D+
Sbjct: 601 KATAEILKFSFKKMKEEMDIHDVKTLNEKYLSNIDV 619

[Close]

BLAST of MELO3C015276 vs. Swiss-Prot
Match: DPO3_CALS4 (DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=polC PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.7e-10
Identity = 51/164 (31.10%), Postives = 83/164 (50.61%), Query Frame = 1


Query: 129 ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITN--SSIHGITNNMVA 188
           + FDIETTG S   D I+EI    +   +   TF+T ++PQ  I++  + + GI  +MV 
Sbjct: 389 VVFDIETTGLSNINDEIIEIGAVKIKNKKIVDTFETFVNPQIPISSFITKLTGIDESMVK 448

Query: 189 SCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLF 248
               P ++E++P  L+F K         +LVAHNA  FDV F+  +  +  + +      
Sbjct: 449 D--APLIEEVLPKFLEFAKG-------AVLVAHNA-NFDVSFIKSKAKKLGLTVEN--TV 508

Query: 249 LDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPD 290
           LDT+ L+R L +     +    L+ L E++ +++    HRA+ D
Sbjct: 509 LDTLELSRHLYQ----DLKNYKLDTLAEFFEVKL-LHHHRAVED 535

[Close]

BLAST of MELO3C015276 vs. Swiss-Prot
Match: DPO3_OCEIH (DNA polymerase III PolC-type OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=polC PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-09
Identity = 55/177 (31.07%), Postives = 88/177 (49.72%), Query Frame = 1


Query: 127 TVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITNSSIH--GITNNM 186
           T + FD+ETTG S   D I+E+A   + GGE    F++  +P   ++ ++I   GIT++M
Sbjct: 413 TFVVFDVETTGLSAVYDTIIELAAVKIKGGEIVDRFESFANPHHALSQTTIDLTGITDDM 472

Query: 187 VASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDW 246
           V            P +   +K      G  +LVAHNA +FD+ FL   F R   +   + 
Sbjct: 473 VNDA---------PEVADVLKDFHTWMGNDILVAHNA-SFDMGFLNQGFQRIDYEKASNP 532

Query: 247 LFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 301
           + +DT+ LAR L+     ++    L  LC++  IE+  + HRA+ D  +   +L +L
Sbjct: 533 V-VDTLELARFLL----PELRNHRLNTLCKHLDIELT-QHHRAIYDAEATGYLLWKL 573

[Close]

BLAST of MELO3C015276 vs. Swiss-Prot
Match: DPO3_CLOTE (DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) GN=polC PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.8e-09
Identity = 54/180 (30.00%), Postives = 85/180 (47.22%), Query Frame = 1


Query: 129 ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLIDPQCYITNSSIH--GITNNMVA 188
           + FDIETTGFS   D+I+EI    +  G+    + T ++P+  I    I   GI + MV 
Sbjct: 414 VVFDIETTGFSNKNDKIIEIGAVKIKEGKVVDKYSTFVNPERIIPEKIIELTGIHDYMVK 473

Query: 189 SCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIPQDWLF 248
               P+++E++P  + F++         +LVAHNA  FDV F+      + I        
Sbjct: 474 D--APKIEEVLPKFIDFIEDS-------ILVAHNA-NFDVSFIKKNCKDFGIHFNNP--I 533

Query: 249 LDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRLTFDLK 306
           LDT+ L + L      ++ +  L  + ++ GI +    HRA+ D  +   IL +   DLK
Sbjct: 534 LDTIPLCKFLY----PELKRYKLNVVAKHLGIPLLNH-HRAVEDAKTTGDILLKAFEDLK 576

[Close]

BLAST of MELO3C015276 vs. TrEMBL
Match: A0A0A0LVY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569080 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 2.5e-166
Identity = 292/327 (89.30%), Postives = 308/327 (94.19%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           TTKAG KAKTNPSSKPTNI NEILQESM ASCTVN+NKSEKS TQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180
           EF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240
           N MV S  VPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300
            +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 328
           TFDLKLD+SDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of MELO3C015276 vs. TrEMBL
Match: A0A0N9LRH7_CUCSA (Exonuclease DPD1 OS=Cucumis sativus GN=DPD1 PE=2 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 3.7e-165
Identity = 290/327 (88.69%), Postives = 307/327 (93.88%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           TTKAG KAKTNPSSKPTNI NEILQES+ ASCTVN+NKSEKS TQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180
           EF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240
           N MV S  VP MQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300
            +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 328
           TFDLKLD+SDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of MELO3C015276 vs. TrEMBL
Match: A0A067GQ64_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019538mg PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 8.1e-96
Identity = 187/330 (56.67%), Postives = 238/330 (72.12%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQN--KRWTRK 60
           MCFSI   PK  +  LAN  RE+FH  +R +GHS  +  LC + Y LE   +  +RW+R+
Sbjct: 6   MCFSILEVPKGRINSLANFCRESFHSFSRRYGHSPSFKLLCSKTYGLEDQDSYTERWSRR 65

Query: 61  SITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIK 120
            ITT   G  KT  S K  NI  E      + S T+NVNK+E S  Q++Q+ DI+  I +
Sbjct: 66  RITTGTEGSKKTIQSHKLKNIKFE------ATSTTINVNKTEISKIQRIQHYDIEQIIAE 125

Query: 121 SKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHG 180
           +K+    VT I FDIETTGFSR  +RI+EIAFQDL GGENSTFQTL++P+  + N+ +HG
Sbjct: 126 NKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPNAHVHG 185

Query: 181 ITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSID 240
           IT +MV    VPRM++LIPI+L +VKSRQKPGGY+L VAHNAR+FDVPFL++EFSR S +
Sbjct: 186 ITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFSRCSYE 245

Query: 241 IPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLIL 300
           +P +WLF+DT+TLAR+LMK   S + +K+SL+AL EYYGI + G AHRA+ DV  LSLIL
Sbjct: 246 VPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYGIPLVGSAHRAMADVNCLSLIL 305

Query: 301 QRLTFDLKLDVSDLVERAFTPLDLINKKKK 328
           QRLTFDLKL + DL+ER FTP DLIN KKK
Sbjct: 306 QRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]

BLAST of MELO3C015276 vs. TrEMBL
Match: U5G9K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s02060g PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.1e-95
Identity = 179/328 (54.57%), Postives = 237/328 (72.26%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MCFSI + P+     LAN W E+   LNR  G +  +  L  +   +EGG +KRW R+ +
Sbjct: 9   MCFSILQVPRCRTHTLANFWWESSRSLNRTCGRNSSFRLLGSKANGMEGGYSKRWIRRPV 68

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           +TK GG+++T   SK T I +EIL E++S   T+N+ K+E S   + QYCDIQ  I +++
Sbjct: 69  STKTGGESQTTRKSKSTTIGHEILDETVSTRSTLNIKKTEVSDFHRNQYCDIQQKIAENE 128

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180
           +    VTVI FDIETTGFSR  +RI+EIA QDL GGENSTFQTL++P  ++TNS IH IT
Sbjct: 129 DIAKLVTVIVFDIETTGFSRQNERIIEIALQDLQGGENSTFQTLVNPGRHVTNSDIHHIT 188

Query: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240
            +MV    VPRM+ELIPI+LQ+VKSRQKPGGYV+ VAHNAR FDVPFL++EF R+  +IP
Sbjct: 189 THMVCRPDVPRMEELIPILLQYVKSRQKPGGYVMFVAHNARNFDVPFLVNEFGRHHFEIP 248

Query: 241 QDWLFLDTMTLARQLMKLSDSKITK-ISLEALCEYYGIEVDGEAHRALPDVISLSLILQR 300
           Q+WLF+DT  LAR+++K+   K+T   SLEALC+ Y I+  G+AHRA+ DV +LSL+LQR
Sbjct: 249 QNWLFVDTRPLAREVLKMEGLKVTSGTSLEALCKKYNIQFVGKAHRAMADVTALSLVLQR 308

Query: 301 LTFDLKLDVSDLVERAFTPLDLINKKKK 328
           LTFDLKL +S L+ + FTP +L + KKK
Sbjct: 309 LTFDLKLPLSGLIAKHFTPSELTSAKKK 336

[Close]

BLAST of MELO3C015276 vs. TrEMBL
Match: V4TAW9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001747mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.2e-95
Identity = 187/330 (56.67%), Postives = 237/330 (71.82%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQN--KRWTRK 60
           MCFSI   PK  +  LAN  RE+FH  +R +GHS  +  LC + Y LE   +  +RW+R+
Sbjct: 6   MCFSILEVPKGRINSLANFCRESFHCFSRRYGHSPSFKLLCSKTYGLEDQDSYTERWSRR 65

Query: 61  SITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIK 120
            ITT   G  KT  S K  NI  E      + S T+NVNK+E S  Q++Q+ DIQ  I +
Sbjct: 66  RITTGTEGSKKTIQSHKLKNIKFE------ATSTTINVNKTEISKIQRIQHYDIQQIIAE 125

Query: 121 SKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHG 180
           +K+    VT I FDIETTGFSR  +RI+EIAFQDL GGENSTFQTL++P+  + N+ +HG
Sbjct: 126 NKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPNAHVHG 185

Query: 181 ITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSID 240
           IT +MV    VPRM++LIPI+L +VKSRQKPGGY+L VAHNAR+FDVPFL++EFSR S +
Sbjct: 186 ITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFSRCSYE 245

Query: 241 IPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLIL 300
           +P +WLF+DT+TLAR+LMK   S + +K+SL+AL EYY I + G AHRA+ DV  LSLIL
Sbjct: 246 VPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYRIPLVGSAHRAMADVNCLSLIL 305

Query: 301 QRLTFDLKLDVSDLVERAFTPLDLINKKKK 328
           QRLTFDLKL + DL+ER FTP DLIN KKK
Sbjct: 306 QRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]

BLAST of MELO3C015276 vs. TAIR10
Match: AT5G26940.1 (AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-59
Identity = 134/323 (41.49%), Postives = 190/323 (58.82%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MC SI +  +  +    +   E  H   +N   S     L  R  +++G    RW R+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKN---SSSLKLLDVRASSVDG--KARWIRRNV 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           +T   G      SS             +  +  V     E+S T+   + ++Q  + + K
Sbjct: 61  STTTQGSRSNTKSSV------------LGGTVPVTRIIDEESRTKVQPFGNLQQRLAQDK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCY-ITNSSIHGI 180
           +    +TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL++P    ITN+ IHGI
Sbjct: 121 DLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGI 180

Query: 181 TNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDI 240
            N+MV    VPRM+ELIPI L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S +I
Sbjct: 181 RNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEI 240

Query: 241 PQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLILQ 300
           P +WL LD++ LAR+ MK  +  +    SLEAL +YY +  +G+AHRAL DV+ LS + Q
Sbjct: 241 PHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQ 300

Query: 301 RLTFDLKLDVSDLVERAFTPLDL 322
           +LT DLKL +SDLV R  T  D+
Sbjct: 301 KLTIDLKLSLSDLVLRCHTASDI 306

[Close]

BLAST of MELO3C015276 vs. NCBI nr
Match: gi|659099409|ref|XP_008450585.1| (PREDICTED: three prime repair exonuclease 2 [Cucumis melo])

HSP 1 Score: 664.5 bits (1713), Expect = 9.8e-188
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI
Sbjct: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180
           EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT
Sbjct: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180

Query: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240
           NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP
Sbjct: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240

Query: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300
           QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL
Sbjct: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300

Query: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 328
           TFDLKLDVSDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 327

[Close]

BLAST of MELO3C015276 vs. NCBI nr
Match: gi|449435615|ref|XP_004135590.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 592.8 bits (1527), Expect = 3.6e-166
Identity = 292/327 (89.30%), Postives = 308/327 (94.19%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           TTKAG KAKTNPSSKPTNI NEILQESM ASCTVN+NKSEKS TQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180
           EF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240
           N MV S  VPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300
            +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 328
           TFDLKLD+SDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of MELO3C015276 vs. NCBI nr
Match: gi|932246042|gb|ALG62680.1| (exonuclease DPD1 [Cucumis sativus])

HSP 1 Score: 589.0 bits (1517), Expect = 5.3e-165
Identity = 290/327 (88.69%), Postives = 307/327 (93.88%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60
           MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120
           TTKAG KAKTNPSSKPTNI NEILQES+ ASCTVN+NKSEKS TQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180
           EF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240
           N MV S  VP MQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300
            +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 328
           TFDLKLD+SDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]

BLAST of MELO3C015276 vs. NCBI nr
Match: gi|641863047|gb|KDO81734.1| (hypothetical protein CISIN_1g019538mg [Citrus sinensis])

HSP 1 Score: 358.6 bits (919), Expect = 1.2e-95
Identity = 187/330 (56.67%), Postives = 238/330 (72.12%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQN--KRWTRK 60
           MCFSI   PK  +  LAN  RE+FH  +R +GHS  +  LC + Y LE   +  +RW+R+
Sbjct: 6   MCFSILEVPKGRINSLANFCRESFHSFSRRYGHSPSFKLLCSKTYGLEDQDSYTERWSRR 65

Query: 61  SITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIK 120
            ITT   G  KT  S K  NI  E      + S T+NVNK+E S  Q++Q+ DI+  I +
Sbjct: 66  RITTGTEGSKKTIQSHKLKNIKFE------ATSTTINVNKTEISKIQRIQHYDIEQIIAE 125

Query: 121 SKEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHG 180
           +K+    VT I FDIETTGFSR  +RI+EIAFQDL GGENSTFQTL++P+  + N+ +HG
Sbjct: 126 NKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPNAHVHG 185

Query: 181 ITNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSID 240
           IT +MV    VPRM++LIPI+L +VKSRQKPGGY+L VAHNAR+FDVPFL++EFSR S +
Sbjct: 186 ITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFSRCSYE 245

Query: 241 IPQDWLFLDTMTLARQLMKLSDSKI-TKISLEALCEYYGIEVDGEAHRALPDVISLSLIL 300
           +P +WLF+DT+TLAR+LMK   S + +K+SL+AL EYYGI + G AHRA+ DV  LSLIL
Sbjct: 246 VPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYGIPLVGSAHRAMADVNCLSLIL 305

Query: 301 QRLTFDLKLDVSDLVERAFTPLDLINKKKK 328
           QRLTFDLKL + DL+ER FTP DLIN KKK
Sbjct: 306 QRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]

BLAST of MELO3C015276 vs. NCBI nr
Match: gi|1009116747|ref|XP_015874941.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 357.5 bits (916), Expect = 2.6e-95
Identity = 185/326 (56.75%), Postives = 241/326 (73.93%), Query Frame = 1


Query: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYN-LEGGQNKRWTRKS 60
           MCFSI + P+F +  L N W  NFH   R + +S    +L   I N LEGG++K+WTR+ 
Sbjct: 6   MCFSILQGPRFKIHTLVNFWSGNFHSWTRTYSNS---SKLHGSIVNGLEGGKSKKWTRRP 65

Query: 61  ITTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKS 120
           +TTKA  +AK   SSK ++I +E+   ++S + T+N+NK+E +  QK+QY DIQ  I ++
Sbjct: 66  VTTKAEERAKRIHSSKTSSIRHEVFDGAVSTNATLNINKTEINQFQKIQYYDIQKIIAEN 125

Query: 121 KEFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGI 180
           K+  + VTV+ FDIETTGFSR  D I+E A Q L GGENSTFQTL++P+  ITNS +HGI
Sbjct: 126 KDLANLVTVVAFDIETTGFSRENDGIIEFALQVLQGGENSTFQTLVNPERNITNSHVHGI 185

Query: 181 TNNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDI 240
           T NMV   GVPRM+ELIPI+LQ+VKS QKPGG+++ VAHN+R+FDVPFLL EFSR SI++
Sbjct: 186 TKNMVDRPGVPRMRELIPILLQYVKSHQKPGGFIMWVAHNSRSFDVPFLLSEFSRCSIEL 245

Query: 241 PQDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQR 300
           P +WLFLDT+ LAR+LMK   SK++KISL+AL EYYGI + G AHRA+ DV SLSLI QR
Sbjct: 246 PPNWLFLDTIPLARELMKSEGSKLSKISLQALREYYGIPLIGSAHRAMSDVRSLSLIFQR 305

Query: 301 LTFDLKLDVSDLVERAFTPLDLINKK 326
           LT+DLKL +  LVER+F   D+  KK
Sbjct: 306 LTYDLKLTMPGLVERSFLGSDIKKKK 328

The following BLAST results are available for this feature:

BLAST of MELO3C015276 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DPD1_ARATH	5.6e-58	41.49	Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE...	[more]
DPO3_CLOPE	9.4e-13	31.02	DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=...	[more]
DPO3_CALS4	9.7e-10	31.10	DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongens...	[more]
DPO3_OCEIH	1.3e-09	31.07	DNA polymerase III PolC-type OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM...	[more]
DPO3_CLOTE	4.8e-09	30.00	DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) ...	[more]

BLAST of MELO3C015276 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVY3_CUCSA	2.5e-166	89.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569080 PE=4 SV=1	[more]
A0A0N9LRH7_CUCSA	3.7e-165	88.69	Exonuclease DPD1 OS=Cucumis sativus GN=DPD1 PE=2 SV=1	[more]
A0A067GQ64_CITSI	8.1e-96	56.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019538mg PE=4 SV=1	[more]
U5G9K5_POPTR	3.1e-95	54.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s02060g PE=4 SV=1	[more]
V4TAW9_9ROSI	5.2e-95	56.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001747mg PE=4 SV=1	[more]

BLAST of MELO3C015276 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26940.1	3.2e-59	41.49	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of MELO3C015276 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099409\|ref\|XP_008450585.1\|	9.8e-188	100.00	PREDICTED: three prime repair exonuclease 2 [Cucumis melo]	[more]
gi\|449435615\|ref\|XP_004135590.1\|	3.6e-166	89.30	PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus]	[more]
gi\|932246042\|gb\|ALG62680.1\|	5.3e-165	88.69	exonuclease DPD1 [Cucumis sativus]	[more]
gi\|641863047\|gb\|KDO81734.1\|	1.2e-95	56.67	hypothetical protein CISIN_1g019538mg [Citrus sinensis]	[more]
gi\|1009116747\|ref\|XP_015874941.1\|	2.6e-95	56.75	PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0000738	DNA catabolic process, exonucleolytic
biological_process	GO:0008150	biological_process
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009536	plastid
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0016740	transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50832	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015276T1	MELO3C015276T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50832	MU50832	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 123..303 score: 2.3
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 125..300 score: 2.25
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 130..290 score: 4.2
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 127..306 score: 5.1
None	No IPR available	PANTHER	PTHR13058	THREE PRIME REPAIR EXONUCLEASE 1, 2	coord: 47..327 score: 5.1E
None	No IPR available	PANTHER	PTHR13058:SF19	PROTEIN W02F12.4, ISOFORM D	coord: 47..327 score: 5.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015276	Csa1G569080	Cucumber (Chinese Long) v2	cumeB041
MELO3C015276	Cla005179	Watermelon (97103) v1	mewmB272
MELO3C015276	ClCG03G017520	Watermelon (Charleston Gray)	mewcgB245
MELO3C015276	Cla97C03G067910	Watermelon (97103) v2	mewmbB250
MELO3C015276	Bhi02G001794	Wax gourd	mewgoB308
MELO3C015276	CSPI01G26080	Wild cucumber (PI 183967)	cpimeB042
MELO3C015276	Cucsa.051310	Cucumber (Gy14) v1	cgymeB030
MELO3C015276	CmaCh10G011420	Cucurbita maxima (Rimu)	cmameB068
MELO3C015276	CmoCh10G012260	Cucurbita moschata (Rifu)	cmomeB060
MELO3C015276	Lsi06G000760	Bottle gourd (USVL1VR-Ls)	lsimeB396
MELO3C015276	Cp4.1LG18g00350	Cucurbita pepo (Zucchini)	cpemeB331
MELO3C015276	CsGy1G025350	Cucumber (Gy14) v2	cgybmeB038
MELO3C015276	Carg27001	Silver-seed gourd	carmeB0593
MELO3C015276	CsaV3_1G038500	Cucumber (Chinese Long) v3	cucmeB042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015276	Silver-seed gourd	carmeB0567
MELO3C015276	Cucumber (Chinese Long) v3	cucmeB119
MELO3C015276	Watermelon (97103) v2	mewmbB242
MELO3C015276	Wax gourd	mewgoB274
MELO3C015276	Melon (DHL92) v3.5.1	memeB107
MELO3C015276	Melon (DHL92) v3.5.1	memeB113
MELO3C015276	Cucumber (Gy14) v1	cgymeB102
MELO3C015276	Cucurbita maxima (Rimu)	cmameB151
MELO3C015276	Cucurbita maxima (Rimu)	cmameB722
MELO3C015276	Cucurbita moschata (Rifu)	cmomeB143
MELO3C015276	Cucurbita moschata (Rifu)	cmomeB712
MELO3C015276	Wild cucumber (PI 183967)	cpimeB113
MELO3C015276	Cucumber (Chinese Long) v2	cumeB112
MELO3C015276	Watermelon (Charleston Gray)	mewcgB237
MELO3C015276	Watermelon (97103) v1	mewmB282
MELO3C015276	Cucurbita pepo (Zucchini)	cpemeB084
MELO3C015276	Cucurbita pepo (Zucchini)	cpemeB748
MELO3C015276	Bottle gourd (USVL1VR-Ls)	lsimeB105