Cucsa.051310 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.051310
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDNA polymerase III polC-type
Locationscaffold00557 : 474339 .. 476375 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CACCTCCATGTCTCCCTAAAGCACCTCTCAATCTTCTTCCACGCCATTTACTCCCTTAACTTACGTTTTTCCTTTGGTTTTTAAATGCAGTATAATCCTCCCTCAGATTTCATTTCAGGCAAGTTCCTTTTCTCTTTCTCTCGCTTTGTAATTTCCATGTTTTTGCATTCAAAGATTGCTTTAGATTGCCGAGAAGTGGGATGATGTTGTACTCTTTTGAAATCTGAAGGTAAATAGTTTGAAGTTGTGTGAGAATGAAATGGGTCGATTTCTGTTTCTGCTATAAACCCTTTTTTTGTTTTTTAATCTAATGCAGTAGTGCTTCATTTGGACGTTTTTAAGTGTCACCGATCGATTGGTTTGCGTTGTTTGATTTTTAGTAATGAATGTTTGGGTTTCTGTTTGTGGGGTATTGGCGAAAGATTGGAGATGGCGGGAGTTGGGAGTGTTCTAGGCCAAATCGGTTTGATTACAATGTGTTTGTTAAAATGTCTGAATAAGATCGTTGAAAATAAATTATTATTATTATTTTTTTTCTTTTTTTTGTCTTTGACGTAATTGTGCTTATACTTTTGAGATCCATCATATGGAGCCCTTAACTTTTTTGTTTTGTTTATTATTTTCGTTATTCTGTATGATAATCAATGTGGAGAATTTAAAGTTGATCCCTTTTCTGTTTCTTGATCTCTGATATGGGGTTATACATTGGTTGTCACACCCCGTTATCTACAGGTTGAAGAAAATTGCTTTCGGTTGCTGGATTTTGTTGGGTTTTCTGTCTAGATTTCCCCTTGTTGTGCTGTGAATTCGAATTTTAACAGCTCCAATGTGCCTTTCAATCTTCCGATTTCCGAAATATGGAGTCCCTGTTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGGAATCATGGTCATAATTGTTGGTATGATCAGCTTTGTTTTAGGATCTATAACCTTGAAGGAGGGCGGAACAAGAGATGGACCAGAAAATCTATTACTACCAAAGCGGGGGAGAAGGCAAAGACCAACCCTAGCAGTAAACCCACCAATATCAGGAATGAAATCTTGCAGGAATCGATGTTAGCAAGCTGTACAGTTAACATTAACAAGTCCGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCGCTCACCTGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAAATCCACAGTGCTATATTACAAATTCAAATATACATGGCATTTCAAACCGTATGGTCGATAGTCCCAGTGTTCCAAGGTATTGAAACGTTCATAGTAGTCTCATTTCTCTTATATCTTCCATTCAGTTCACTGCTAGTTACAGTCATTTATCAATCATATATTTTTATACATGTTCAAACGCTCCTTTTCTTGTTCATATAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGACGTACCCTTTTTACTCAGTGAATTCAGCCGTTACTCCGTTGATATTCCTCTAAATTGGCTATTTTTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGGTTAGTTTTCCCTTTCCCCATATTATCGTTTTCTAGTTTCTCTGTGAATAAAAGGATTAGAGTGATGTAATGTAATATTGTTGATGGCAATATCATGATCAGATTCGAAGATTACAAAAATAACATTACAAGCTCTTGGCGAGTATTACGGTATAAAACTGGATGGTAAAGCACATCGAGCATTGTCAGACGTGAGATTGTTGTCATCGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATATCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAG

mRNA sequence

CACCTCCATGTCTCCCTAAAGCACCTCTCAATCTTCTTCCACGCCATTTACTCCCTTAACTTACGTTTTTCCTTTGGTTTTTAAATGCAGTATAATCCTCCCTCAGATTTCATTTCAGGTTGAAGAAAATTGCTTTCGGTTGCTGGATTTTGTTGGGTTTTCTGTCTAGATTTCCCCTTGTTGTGCTGTGAATTCGAATTTTAACAGCTCCAATGTGCCTTTCAATCTTCCGATTTCCGAAATATGGAGTCCCTGTTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGGAATCATGGTCATAATTGTTGGTATGATCAGCTTTGTTTTAGGATCTATAACCTTGAAGGAGGGCGGAACAAGAGATGGACCAGAAAATCTATTACTACCAAAGCGGGGGAGAAGGCAAAGACCAACCCTAGCAGTAAACCCACCAATATCAGGAATGAAATCTTGCAGGAATCGATGTTAGCAAGCTGTACAGTTAACATTAACAAGTCCGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCGCTCACCTGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAAATCCACAGTGCTATATTACAAATTCAAATATACATGGCATTTCAAACCGTATGGTCGATAGTCCCAGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGACGTACCCTTTTTACTCAGTGAATTCAGCCGTTACTCCGTTGATATTCCTCTAAATTGGCTATTTTTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGATTCGAAGATTACAAAAATAACATTACAAGCTCTTGGCGAGTATTACGGTATAAAACTGGATGGTAAAGCACATCGAGCATTGTCAGACGTGAGATTGTTGTCATCGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATATCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAG

Coding sequence (CDS)

ATGTGCCTTTCAATCTTCCGATTTCCGAAATATGGAGTCCCTGTTTTAGCTAACCTTTGGAGGGAAAACTTTCATCCCTTGAACAGGAATCATGGTCATAATTGTTGGTATGATCAGCTTTGTTTTAGGATCTATAACCTTGAAGGAGGGCGGAACAAGAGATGGACCAGAAAATCTATTACTACCAAAGCGGGGGAGAAGGCAAAGACCAACCCTAGCAGTAAACCCACCAATATCAGGAATGAAATCTTGCAGGAATCGATGTTAGCAAGCTGTACAGTTAACATTAACAAGTCCGAGAAAAGTGAAACTCAGAAGCTTCAATATTGTGATATTCAACCAACAATTATTAAGAGCAAGGAATTCGCTCACCTGGTGACAGTTATAACCTTTGACATTGAAACGACAGGTTTTAGTAGAAACCTCGATAGAATAGTGGAAATTGCATTTCAAGATCTTTCAGGAGGAGAAAATAGCACCTTTCAAACATTAATAAATCCACAGTGCTATATTACAAATTCAAATATACATGGCATTTCAAACCGTATGGTCGATAGTCCCAGTGTTCCAAGGATGCAGGAACTTATTCCAATTATATTACAATTTGTCAAAAGCCGTCAGAAACCTGGTGGTTATGTATTATTGGTAGCTCATAATGCTCGTACCTTCGACGTACCCTTTTTACTCAGTGAATTCAGCCGTTACTCCGTTGATATTCCTCTAAATTGGCTATTTTTCGATACTATGACGTTAGCCCGTCAACTGATGAAGTTATCCGATTCGAAGATTACAAAAATAACATTACAAGCTCTTGGCGAGTATTACGGTATAAAACTGGATGGTAAAGCACATCGAGCATTGTCAGACGTGAGATTGTTGTCATCGATTCTTCAGAGGCTTACTTTCGACCTCAAGCTAGATATCTCGGATCTCGTTGAAAGAGCTTTCACTCCTTTAGATCTGATTAATAAGAAGAAAAAATAG

Protein sequence

MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSITTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLKLDISDLVERAFTPLDLINKKKK*
Homology
[Close]
BLAST of Cucsa.051310 vs. Swiss-Prot
Match: DPD1_ARATH (Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.6e-60
Identity = 138/326 (42.33%), Postives = 199/326 (61.04%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MC+SI +  +  +    +   E  H   +N       D    R  +++G    RW R+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKNSSSLKLLD---VRASSVDG--KARWIRRNV 60

Query: 61  -TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINK--SEKSETQKLQYCDIQPTII 120
            TT  G ++ T               +S +   TV + +   E+S T+   + ++Q  + 
Sbjct: 61  STTTQGSRSNT---------------KSSVLGGTVPVTRIIDEESRTKVQPFGNLQQRLA 120

Query: 121 KSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNI 180
           + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++I
Sbjct: 121 QDKDLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHI 180

Query: 181 HGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYS 240
           HGI N MV  P VPRM+ELIPI L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S
Sbjct: 181 HGIRNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCS 240

Query: 241 VDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSS 300
            +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS 
Sbjct: 241 YEIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSK 300

Query: 301 ILQRLTFDLKLDISDLVERAFTPLDL 322
           + Q+LT DLKL +SDLV R  T  D+
Sbjct: 301 VFQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]
BLAST of Cucsa.051310 vs. Swiss-Prot
Match: DPO3_CLOPE (DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=polC PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-11
Identity = 64/203 (31.53%), Postives = 99/203 (48.77%), Query Frame = 1 

Query: 114 PTIIKSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYIT 173
           P +I   E +     + FDIETTGFS   D+I+EI    L  GE   +F T ++P+  I 
Sbjct: 421 PIVINGHEESFDDEYVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIP 480

Query: 174 N--SNIHGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLS 233
              + +  I+  MV+    P + E++P  ++FV       G  +LVAHNA  FDV F+  
Sbjct: 481 YKITELTSITQNMVNGQ--PTIDEVLPKFMEFV-------GNSVLVAHNA-AFDVGFIKK 540

Query: 234 EFSRYSVDIPLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDV 293
                 +   L     DT+ LAR L       + K+ L  + ++ GI L+   HRA+ D 
Sbjct: 541 NL--MDMGKTLKNPVMDTVPLARYLY----PDLKKVKLNLVAKHLGISLENH-HRAVDDA 600

Query: 294 RLLSSILQRLTFDLK--LDISDL 312
           +  + IL+     +K  +DI D+
Sbjct: 601 KATAEILKFSFKKMKEEMDIHDV 606

[Close]
BLAST of Cucsa.051310 vs. Swiss-Prot
Match: DPO3_CALS4 (DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=polC PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-11
Identity = 56/175 (32.00%), Postives = 89/175 (50.86%), Query Frame = 1 

Query: 129 ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITN--SNIHGISNRMVD 188
           + FDIETTG S   D I+EI    +   +   TF+T +NPQ  I++  + + GI   MV 
Sbjct: 389 VVFDIETTGLSNINDEIIEIGAVKIKNKKIVDTFETFVNPQIPISSFITKLTGIDESMV- 448

Query: 189 SPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLF 248
               P ++E++P  L+F K         +LVAHNA  FDV F+ S+  +  + +    L 
Sbjct: 449 -KDAPLIEEVLPKFLEFAKG-------AVLVAHNA-NFDVSFIKSKAKKLGLTVENTVL- 508

Query: 249 FDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 301
            DT+ L+R L +     +    L  L E++ +KL    HRA+ D +  + I  ++
Sbjct: 509 -DTLELSRHLYQ----DLKNYKLDTLAEFFEVKL-LHHHRAVEDAKATAEIFIKM 546

[Close]
BLAST of Cucsa.051310 vs. Swiss-Prot
Match: DPO3_CLOTE (DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) GN=polC PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10
Identity = 60/200 (30.00%), Postives = 96/200 (48.00%), Query Frame = 1 

Query: 129 ITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITNSNIH--GISNRMVD 188
           + FDIETTGFS   D+I+EI    +  G+    + T +NP+  I    I   GI + MV 
Sbjct: 414 VVFDIETTGFSNKNDKIIEIGAVKIKEGKVVDKYSTFVNPERIIPEKIIELTGIHDYMV- 473

Query: 189 SPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNWLF 248
               P+++E++P  + F++         +LVAHNA  FDV F+      +   I  N   
Sbjct: 474 -KDAPKIEEVLPKFIDFIEDS-------ILVAHNA-NFDVSFIKKNCKDFG--IHFNNPI 533

Query: 249 FDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRLTFDLK 308
            DT+ L + L      ++ +  L  + ++ GI L    HRA+ D +    IL +   DLK
Sbjct: 534 LDTIPLCKFLY----PELKRYKLNVVAKHLGIPLLNH-HRAVEDAKTTGDILLKAFEDLK 593

Query: 309 ----LDISDLVERAFTPLDL 322
               ++++ L E  F   D+
Sbjct: 594 DKEIMNLNMLNEEYFKNQDI 596

[Close]
BLAST of Cucsa.051310 vs. Swiss-Prot
Match: DPO3_OCEIH (DNA polymerase III PolC-type OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=polC PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-08
Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 1 

Query: 127 TVITFDIETTGFSRNLDRIVEIAFQDLSGGE-NSTFQTLINPQCYITNSNIH--GISNRM 186
           T + FD+ETTG S   D I+E+A   + GGE    F++  NP   ++ + I   GI++ M
Sbjct: 413 TFVVFDVETTGLSAVYDTIIELAAVKIKGGEIVDRFESFANPHHALSQTTIDLTGITDDM 472

Query: 187 VDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIPLNW 246
           V+           P +   +K      G  +LVAHNA +FD+ FL   F R   +   N 
Sbjct: 473 VND---------APEVADVLKDFHTWMGNDILVAHNA-SFDMGFLNQGFQRIDYEKASNP 532

Query: 247 LFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVR----LLSSILQR 301
           +  DT+ LAR L+     ++    L  L ++  I+L  + HRA+ D      LL  ++QR
Sbjct: 533 V-VDTLELARFLL----PELRNHRLNTLCKHLDIELT-QHHRAIYDAEATGYLLWKLVQR 577

[Close]
BLAST of Cucsa.051310 vs. TrEMBL
Match: A0A0A0LVY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569080 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 2.2e-186
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120
           TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180
           EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240
           NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300
           LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDISDLVERAFTPLDLINKKKK 328
           TFDLKLDISDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]
BLAST of Cucsa.051310 vs. TrEMBL
Match: A0A0N9LRH7_CUCSA (Exonuclease DPD1 OS=Cucumis sativus GN=DPD1 PE=2 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 3.2e-185
Identity = 325/327 (99.39%), Postives = 326/327 (99.69%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120
           TTKAGEKAKTNPSSKPTNIRNEILQES+LASCTVNINKSEKSETQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180
           EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240
           NRMVDSPSVP MQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300
           LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDISDLVERAFTPLDLINKKKK 328
           TFDLKLDISDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]
BLAST of Cucsa.051310 vs. TrEMBL
Match: A0A067GQ64_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019538mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.3e-97
Identity = 187/330 (56.67%), Postives = 238/330 (72.12%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEG--GRNKRWTRK 60
           MC SI   PK  +  LAN  RE+FH  +R +GH+  +  LC + Y LE      +RW+R+
Sbjct: 6   MCFSILEVPKGRINSLANFCRESFHSFSRRYGHSPSFKLLCSKTYGLEDQDSYTERWSRR 65

Query: 61  SITTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIK 120
            ITT      KT  S K  NI+ E        S T+N+NK+E S+ Q++Q+ DI+  I +
Sbjct: 66  RITTGTEGSKKTIQSHKLKNIKFEA------TSTTINVNKTEISKIQRIQHYDIEQIIAE 125

Query: 121 SKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHG 180
           +K+ A LVT I FDIETTGFSR  +RI+EIAFQDL GGENSTFQTL+NP+  + N+++HG
Sbjct: 126 NKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPNAHVHG 185

Query: 181 ISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVD 240
           I+  MV  P VPRM++LIPI+L +VKSRQKPGGY+L VAHNAR+FDVPFL++EFSR S +
Sbjct: 186 ITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFSRCSYE 245

Query: 241 IPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSIL 300
           +P NWLF DT+TLAR+LMK   S + +K++LQAL EYYGI L G AHRA++DV  LS IL
Sbjct: 246 VPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYGIPLVGSAHRAMADVNCLSLIL 305

Query: 301 QRLTFDLKLDISDLVERAFTPLDLINKKKK 328
           QRLTFDLKL + DL+ER FTP DLIN KKK
Sbjct: 306 QRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]
BLAST of Cucsa.051310 vs. TrEMBL
Match: V4TAW9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001747mg PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.7e-96
Identity = 187/330 (56.67%), Postives = 237/330 (71.82%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEG--GRNKRWTRK 60
           MC SI   PK  +  LAN  RE+FH  +R +GH+  +  LC + Y LE      +RW+R+
Sbjct: 6   MCFSILEVPKGRINSLANFCRESFHCFSRRYGHSPSFKLLCSKTYGLEDQDSYTERWSRR 65

Query: 61  SITTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIK 120
            ITT      KT  S K  NI+ E        S T+N+NK+E S+ Q++Q+ DIQ  I +
Sbjct: 66  RITTGTEGSKKTIQSHKLKNIKFEA------TSTTINVNKTEISKIQRIQHYDIQQIIAE 125

Query: 121 SKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHG 180
           +K+ A LVT I FDIETTGFSR  +RI+EIAFQDL GGENSTFQTL+NP+  + N+++HG
Sbjct: 126 NKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPNAHVHG 185

Query: 181 ISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVD 240
           I+  MV  P VPRM++LIPI+L +VKSRQKPGGY+L VAHNAR+FDVPFL++EFSR S +
Sbjct: 186 ITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFSRCSYE 245

Query: 241 IPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSIL 300
           +P NWLF DT+TLAR+LMK   S + +K++LQAL EYY I L G AHRA++DV  LS IL
Sbjct: 246 VPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYRIPLVGSAHRAMADVNCLSLIL 305

Query: 301 QRLTFDLKLDISDLVERAFTPLDLINKKKK 328
           QRLTFDLKL + DL+ER FTP DLIN KKK
Sbjct: 306 QRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

[Close]
BLAST of Cucsa.051310 vs. TrEMBL
Match: A0A151TW26_CAJCA (DNA polymerase III polC-type OS=Cajanus cajan GN=KK1_010530 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.8e-95
Identity = 177/327 (54.13%), Postives = 233/327 (71.25%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           M  S+   P   +  LAN W E FH  + N G+N     L  RIY L+GG  K+WTR   
Sbjct: 6   MIFSLLHVPGCRIQSLANFWGETFHSFSTNCGNNSSIRLLGSRIYGLQGGHRKKWTRPIT 65

Query: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120
           T   G     N S+K  +I++EIL E++LAS TVN+NK++  + Q ++YCD+Q  I ++K
Sbjct: 66  TNTEG-----NRSTKSKSIKHEILNETILASSTVNVNKTQLGQFQAIEYCDLQQEIAQNK 125

Query: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180
             + LVTVI FDIETTG SR  +RI+EIA +DL GGENSTFQTL+NPQC + NS IHGI+
Sbjct: 126 NLSSLVTVIVFDIETTGLSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSRIHGIT 185

Query: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240
            +MV+ P VPRM +LIPI+L +V++R+KPGGYVL VAHNAR FDVPF+++E  RYS++IP
Sbjct: 186 TQMVNKPGVPRMVDLIPILLNYVQTREKPGGYVLFVAHNARCFDVPFIINELRRYSMEIP 245

Query: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300
            NWLF DT+ LAR+LMK   ++++  +L AL + Y IK+DG AHRA+ DV  LS IL RL
Sbjct: 246 PNWLFLDTLPLARELMKSGGTELSSTSLAALRDLYRIKVDGSAHRAMVDVNTLSLILPRL 305

Query: 301 TFDLKLDISDLVERAFTPLDLINKKKK 328
           TFDLKL +S LV+++FT  D+IN KKK
Sbjct: 306 TFDLKLTLSGLVKKSFTESDIINSKKK 327

[Close]
BLAST of Cucsa.051310 vs. TAIR10
Match: AT5G26940.1 (AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 234.6 bits (597), Expect = 8.9e-62
Identity = 138/326 (42.33%), Postives = 199/326 (61.04%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MC+SI +  +  +    +   E  H   +N       D    R  +++G    RW R+++
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKNSSSLKLLD---VRASSVDG--KARWIRRNV 60

Query: 61  -TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINK--SEKSETQKLQYCDIQPTII 120
            TT  G ++ T               +S +   TV + +   E+S T+   + ++Q  + 
Sbjct: 61  STTTQGSRSNT---------------KSSVLGGTVPVTRIIDEESRTKVQPFGNLQQRLA 120

Query: 121 KSKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCY-ITNSNI 180
           + K+ + L+TVI  D+ETTG  R  +RI+EIA QD++GG  STFQTL+NP    ITN++I
Sbjct: 121 QDKDLSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHI 180

Query: 181 HGISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYS 240
           HGI N MV  P VPRM+ELIPI L++V+SRQKPGGYV+LVAHN ++FD  FL++EF+R S
Sbjct: 181 HGIRNDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCS 240

Query: 241 VDIPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSS 300
            +IP NWL  D++ LAR+ MK  +  +    +L+AL +YY +  +G AHRALSDV LLS 
Sbjct: 241 YEIPHNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSK 300

Query: 301 ILQRLTFDLKLDISDLVERAFTPLDL 322
           + Q+LT DLKL +SDLV R  T  D+
Sbjct: 301 VFQKLTIDLKLSLSDLVLRCHTASDI 306

[Close]
BLAST of Cucsa.051310 vs. NCBI nr
Match: gi|449435615|ref|XP_004135590.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 659.4 bits (1700), Expect = 3.2e-186
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120
           TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180
           EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240
           NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP
Sbjct: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300
           LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDISDLVERAFTPLDLINKKKK 328
           TFDLKLDISDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]
BLAST of Cucsa.051310 vs. NCBI nr
Match: gi|932246042|gb|ALG62680.1| (exonuclease DPD1 [Cucumis sativus])

HSP 1 Score: 655.6 bits (1690), Expect = 4.6e-185
Identity = 325/327 (99.39%), Postives = 326/327 (99.69%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI
Sbjct: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60

Query: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120
           TTKAGEKAKTNPSSKPTNIRNEILQES+LASCTVNINKSEKSETQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGEKAKTNPSSKPTNIRNEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120

Query: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180
           EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS
Sbjct: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180

Query: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240
           NRMVDSPSVP MQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP
Sbjct: 181 NRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240

Query: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300
           LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL
Sbjct: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300

Query: 301 TFDLKLDISDLVERAFTPLDLINKKKK 328
           TFDLKLDISDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDISDLVERAFTPLDLINKKKK 327

[Close]
BLAST of Cucsa.051310 vs. NCBI nr
Match: gi|659099409|ref|XP_008450585.1| (PREDICTED: three prime repair exonuclease 2 [Cucumis melo])

HSP 1 Score: 592.8 bits (1527), Expect = 3.6e-166
Identity = 292/327 (89.30%), Postives = 308/327 (94.19%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEGGRNKRWTRKSI 60
           MC SIFRFPK+GVP+LANLWRENFHPLNRNHGH+CWYDQLCFRIYNLEGG+NKRWTRKSI
Sbjct: 1   MCFSIFRFPKFGVPILANLWRENFHPLNRNHGHSCWYDQLCFRIYNLEGGQNKRWTRKSI 60

Query: 61  TTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKSK 120
           TTKAG KAKTNPSSKPTNI NEILQESM ASCTVN+NKSEKS TQKLQYCDIQPTIIKSK
Sbjct: 61  TTKAGGKAKTNPSSKPTNITNEILQESMSASCTVNVNKSEKSGTQKLQYCDIQPTIIKSK 120

Query: 121 EFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGIS 180
           EF H VTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLI+PQCYITNS+IHGI+
Sbjct: 121 EFIHPVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLIDPQCYITNSSIHGIT 180

Query: 181 NRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDIP 240
           N MV S  VPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLL EFSRYS+DIP
Sbjct: 181 NNMVASCGVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLHEFSRYSIDIP 240

Query: 241 LNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQRL 300
            +WLF DTMTLARQLMKLSDSKITKI+L+AL EYYGI++DG+AHRAL DV  LS ILQRL
Sbjct: 241 QDWLFLDTMTLARQLMKLSDSKITKISLEALCEYYGIEVDGEAHRALPDVISLSLILQRL 300

Query: 301 TFDLKLDISDLVERAFTPLDLINKKKK 328
           TFDLKLD+SDLVERAFTPLDLINKKKK
Sbjct: 301 TFDLKLDVSDLVERAFTPLDLINKKKK 327

[Close]
BLAST of Cucsa.051310 vs. NCBI nr
Match: gi|1009116747|ref|XP_015874941.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 369.4 bits (947), Expect = 6.5e-99
Identity = 187/326 (57.36%), Postives = 245/326 (75.15%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYN-LEGGRNKRWTRKS 60
           MC SI + P++ +  L N W  NFH   R + ++    +L   I N LEGG++K+WTR+ 
Sbjct: 6   MCFSILQGPRFKIHTLVNFWSGNFHSWTRTYSNS---SKLHGSIVNGLEGGKSKKWTRRP 65

Query: 61  ITTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKS 120
           +TTKA E+AK   SSK ++IR+E+   ++  + T+NINK+E ++ QK+QY DIQ  I ++
Sbjct: 66  VTTKAEERAKRIHSSKTSSIRHEVFDGAVSTNATLNINKTEINQFQKIQYYDIQKIIAEN 125

Query: 121 KEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGI 180
           K+ A+LVTV+ FDIETTGFSR  D I+E A Q L GGENSTFQTL+NP+  ITNS++HGI
Sbjct: 126 KDLANLVTVVAFDIETTGFSRENDGIIEFALQVLQGGENSTFQTLVNPERNITNSHVHGI 185

Query: 181 SNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDI 240
           +  MVD P VPRM+ELIPI+LQ+VKS QKPGG+++ VAHN+R+FDVPFLLSEFSR S+++
Sbjct: 186 TKNMVDRPGVPRMRELIPILLQYVKSHQKPGGFIMWVAHNSRSFDVPFLLSEFSRCSIEL 245

Query: 241 PLNWLFFDTMTLARQLMKLSDSKITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQR 300
           P NWLF DT+ LAR+LMK   SK++KI+LQAL EYYGI L G AHRA+SDVR LS I QR
Sbjct: 246 PPNWLFLDTIPLARELMKSEGSKLSKISLQALREYYGIPLIGSAHRAMSDVRSLSLIFQR 305

Query: 301 LTFDLKLDISDLVERAFTPLDLINKK 326
           LT+DLKL +  LVER+F   D+  KK
Sbjct: 306 LTYDLKLTMPGLVERSFLGSDIKKKK 328

[Close]
BLAST of Cucsa.051310 vs. NCBI nr
Match: gi|641863047|gb|KDO81734.1| (hypothetical protein CISIN_1g019538mg [Citrus sinensis])

HSP 1 Score: 362.1 bits (928), Expect = 1.0e-96
Identity = 187/330 (56.67%), Postives = 238/330 (72.12%), Query Frame = 1 

Query: 1   MCLSIFRFPKYGVPVLANLWRENFHPLNRNHGHNCWYDQLCFRIYNLEG--GRNKRWTRK 60
           MC SI   PK  +  LAN  RE+FH  +R +GH+  +  LC + Y LE      +RW+R+
Sbjct: 6   MCFSILEVPKGRINSLANFCRESFHSFSRRYGHSPSFKLLCSKTYGLEDQDSYTERWSRR 65

Query: 61  SITTKAGEKAKTNPSSKPTNIRNEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIK 120
            ITT      KT  S K  NI+ E        S T+N+NK+E S+ Q++Q+ DI+  I +
Sbjct: 66  RITTGTEGSKKTIQSHKLKNIKFEA------TSTTINVNKTEISKIQRIQHYDIEQIIAE 125

Query: 121 SKEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHG 180
           +K+ A LVT I FDIETTGFSR  +RI+EIAFQDL GGENSTFQTL+NP+  + N+++HG
Sbjct: 126 NKDLAKLVTAIVFDIETTGFSRENERIIEIAFQDLLGGENSTFQTLVNPKRQVPNAHVHG 185

Query: 181 ISNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVD 240
           I+  MV  P VPRM++LIPI+L +VKSRQKPGGY+L VAHNAR+FDVPFL++EFSR S +
Sbjct: 186 ITTDMVCKPDVPRMEDLIPILLHYVKSRQKPGGYILFVAHNARSFDVPFLINEFSRCSYE 245

Query: 241 IPLNWLFFDTMTLARQLMKLSDSKI-TKITLQALGEYYGIKLDGKAHRALSDVRLLSSIL 300
           +P NWLF DT+TLAR+LMK   S + +K++LQAL EYYGI L G AHRA++DV  LS IL
Sbjct: 246 VPNNWLFMDTLTLARELMKSGGSNLPSKVSLQALREYYGIPLVGSAHRAMADVNCLSLIL 305

Query: 301 QRLTFDLKLDISDLVERAFTPLDLINKKKK 328
           QRLTFDLKL + DL+ER FTP DLIN KKK
Sbjct: 306 QRLTFDLKLSLCDLIERGFTPSDLINPKKK 329

The following BLAST results are available for this feature:
BLAST of Cucsa.051310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPD1_ARATH1.6e-6042.33Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE... [more]
DPO3_CLOPE1.4e-1131.53DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=... [more]
DPO3_CALS42.3e-1132.00DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongens... [more]
DPO3_CLOTE1.5e-1030.00DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) ... [more]
DPO3_OCEIH3.1e-0832.04DNA polymerase III PolC-type OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM... [more]
BLAST of Cucsa.051310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVY3_CUCSA2.2e-186100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569080 PE=4 SV=1[more]
A0A0N9LRH7_CUCSA3.2e-18599.39Exonuclease DPD1 OS=Cucumis sativus GN=DPD1 PE=2 SV=1[more]
A0A067GQ64_CITSI7.3e-9756.67Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019538mg PE=4 SV=1[more]
V4TAW9_9ROSI4.7e-9656.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001747mg PE=4 SV=1[more]
A0A151TW26_CAJCA6.8e-9554.13DNA polymerase III polC-type OS=Cajanus cajan GN=KK1_010530 PE=4 SV=1[more]
BLAST of Cucsa.051310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G26940.18.9e-6242.33 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Cucsa.051310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435615|ref|XP_004135590.1|3.2e-186100.00PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Cucumis sativus][more]
gi|932246042|gb|ALG62680.1|4.6e-18599.39exonuclease DPD1 [Cucumis sativus][more]
gi|659099409|ref|XP_008450585.1|3.6e-16689.30PREDICTED: three prime repair exonuclease 2 [Cucumis melo][more]
gi|1009116747|ref|XP_015874941.1|6.5e-9957.36PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ziziphus jujuba][more]
gi|641863047|gb|KDO81734.1|1.0e-9656.67hypothetical protein CISIN_1g019538mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0008150 biological_process
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016779 nucleotidyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.051310.2Cucsa.051310.2mRNA
Cucsa.051310.1Cucsa.051310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 127..304
score: 2.1
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 127..300
score: 1.24
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 130..292
score: 7.9
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 127..306
score: 5.4
NoneNo IPR availablePANTHERPTHR13058THREE PRIME REPAIR EXONUCLEASE 1, 2coord: 47..327
score: 1.4
NoneNo IPR availablePANTHERPTHR13058:SF19PROTEIN W02F12.4, ISOFORM Dcoord: 47..327
score: 1.4