MELO3C014591 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014591
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNuclear transcription factor Y subunit C-2
Locationchr5 : 1104786 .. 1105544 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTTGAACTCTATCTCCCTCCTTTCTCTCTCTCACTGATTACTACCTCGGGCAGCGGGCAGCCTACCCCTGCTTATAATCAGCTCAAGATGGGCAGGGAAATGCCAATCCCTCTTTTCACTCTGTTCCTCTCTCTCTCTCTCTAGGGTTTTGTGGGTTTTTCAACTTCAATCCTTCTCTTTAATGGTTATCTTCCCAAATTCTCTCAAACCCTTTTCTTTTTAGAACGAATCCTTTCTAAAGCTTAAATCTTCTCGCTTAAACCCCTCTGTTTTTTCTTCTTACTCAAATTCCTCTGTTTTCCTTCAAAAATGGCGCCTTCAGGAGCAAGAGTGGCTACGAGAACGAGAAGAAGTTTACCCAACTTGAAGCTAACGAAGAAAATCAAGAAAACGACGAACAAGAAACAACCGCTGCAGAAGACGGAGATTCCAGCCGCCGTCACGCAAAACGACATCGTGGAATTTGGCGACGAGTGTTCCGACGGCGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTCTGACGTGTCCACCGGCGCCGAAGAAACCTAGAGCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGAAGCTCAAAAATGAAAAAAAAAAAAAAAATCGTGTGTTTATACAAATTTTTACAGACATATGAATGAATCAATCATCCAAGTTGT

mRNA sequence

AAATTTGAACTCTATCTCCCTCCTTTCTCTCTCTCACTGATTACTACCTCGGGCAGCGGGCAGCCTACCCCTGCTTATAATCAGCTCAAGATGGGCAGGGAAATGCCAATCCCTCTTTTCACTCTGTTCCTCTCTCTCTCTCTCTAGGGTTTTGTGGGTTTTTCAACTTCAATCCTTCTCTTTAATGGTTATCTTCCCAAATTCTCTCAAACCCTTTTCTTTTTAGAACGAATCCTTTCTAAAGCTTAAATCTTCTCGCTTAAACCCCTCTGTTTTTTCTTCTTACTCAAATTCCTCTGTTTTCCTTCAAAAATGGCGCCTTCAGGAGCAAGAGTGGCTACGAGAACGAGAAGAAGTTTACCCAACTTGAAGCTAACGAAGAAAATCAAGAAAACGACGAACAAGAAACAACCGCTGCAGAAGACGGAGATTCCAGCCGCCGTCACGCAAAACGACATCGTGGAATTTGGCGACGAGTGTTCCGACGGCGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTCTGACGTGTCCACCGGCGCCGAAGAAACCTAGAGCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGAAGCTCAAAAATGAAAAAAAAAAAAAAAATCGTGTGTTTATACAAATTTTTACAGACATATGAATGAATCAATCATCCAAGTTGT

Coding sequence (CDS)

ATGGCGCCTTCAGGAGCAAGAGTGGCTACGAGAACGAGAAGAAGTTTACCCAACTTGAAGCTAACGAAGAAAATCAAGAAAACGACGAACAAGAAACAACCGCTGCAGAAGACGGAGATTCCAGCCGCCGTCACGCAAAACGACATCGTGGAATTTGGCGACGAGTGTTCCGACGGCGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTCTGACGTGTCCACCGGCGCCGAAGAAACCTAGAGCCGTTTCCGATTGCTCATTCCGACGATCACCCATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGA

Protein sequence

MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV*
Homology
[Close]
BLAST of MELO3C014591 vs. TrEMBL
Match: A0A0A0L0Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G291940 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.6e-57
Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 1 

Query: 1   MAPSGARVATRT-RRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECSDG 60
           MAPSGAR+ATRT RR+LPNLKLTKKIKKTTNKKQP QK EIP  VTQNDIVEFGDECSDG
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSDG 60

Query: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPKAERHRIPEILTCPPAPKKPRAVSDCS RRSPIAFFAPPELELFFFVALPVPDIS
Sbjct: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPDIS 120

[Close]
BLAST of MELO3C014591 vs. TrEMBL
Match: M5WK19_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016642mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-19
Identity = 61/132 (46.21%), Postives = 73/132 (55.30%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQN------------- 60
           MAPS AR   +T       K T K +KT  KK+P+ +         N             
Sbjct: 1   MAPS-ARTRAKT-------KTTTKARKTNFKKKPVHQKGKQQITPSNSPSNSSSVVCDDP 60

Query: 61  -------DIVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFF 113
                  D VE  D+ S   CSTPK +R RIPEI+TCPPAPKK R +S+C FRRSPIAFF
Sbjct: 61  PKIEGCADDVEGPDDVSTSACSTPKGQRFRIPEIVTCPPAPKKQRVISNCLFRRSPIAFF 120

[Close]
BLAST of MELO3C014591 vs. TrEMBL
Match: B9RID1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578060 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-18
Identity = 64/142 (45.07%), Postives = 79/142 (55.63%), Query Frame = 1 

Query: 1   MAPSG-ARVATRTRRS---LPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDEC 60
           MAPSG +R  TRTR      P  K T+K + T  KK+P +   I       D+       
Sbjct: 1   MAPSGRSRTRTRTRAKPTPTPKPKPTRKPRITRCKKRPSKSKNIQETPAMEDLPSSSSTT 60

Query: 61  S----DG--------------GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIA 120
           +    DG               CSTPKA++ RIPEI+TCPPAPKK R +S+CS +R PIA
Sbjct: 61  TSLKIDGFDFEGVDDHISTTSPCSTPKAQKFRIPEIVTCPPAPKKQRMISNCSLQRRPIA 120

[Close]
BLAST of MELO3C014591 vs. TrEMBL
Match: W9RHW5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015298 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-18
Identity = 56/130 (43.08%), Postives = 78/130 (60.00%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAA---------------VT 60
           M PSG R  TRTR +    + ++ +K+T+N ++     E+                  + 
Sbjct: 1   MGPSG-RTRTRTRTARKARRKSELMKRTSNNQESGHDHEVVVINSPTKSSSSNDDDHLIP 60

Query: 61  QNDIVEFG--DECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPP 114
           + + +EF   D+    GCSTPK +R RIPEI TCPPAPKK R +S+CS +R+PIAFFAPP
Sbjct: 61  KTEGIEFEAVDDDDVVGCSTPKGQRFRIPEIRTCPPAPKKQRVISNCSIQRTPIAFFAPP 120

[Close]
BLAST of MELO3C014591 vs. TrEMBL
Match: A0A0B2P2B0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028474 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.2e-18
Identity = 59/156 (37.82%), Postives = 82/156 (52.56%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQK-------------------TEIP 60
           MAPSG      TR +    + T++ ++TTN K+  Q+                   T +P
Sbjct: 32  MAPSGRTTTASTRTTSKTTRRTRQQRRTTNFKKKQQQQHNTKSNNNKKQQEEVPVPTVLP 91

Query: 61  AAVTQNDIVEFGDECS-----------------DGGCSTPKAERHRIPEILTCPPAPKKP 120
           ++   +  +   D  +                 +  CSTPK ++ RIPEI TCPPAPKKP
Sbjct: 92  SSYCSSSSISSQDSSNSKEVDNMHGSAEVIDVCNSPCSTPKGKKFRIPEISTCPPAPKKP 151

[Close]
BLAST of MELO3C014591 vs. TAIR10
Match: AT3G20898.1 (AT3G20898.1 unknown protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16
Identity = 49/105 (46.67%), Postives = 56/105 (53.33%), Query Frame = 1 

Query: 17  PNLKLTKKIKKTTNKKQPLQKTEI------------PAAVTQNDIVEFGDECSDGGCSTP 76
           PN +  KK+ ++  KKQ  Q   I            PAAV            S GGC TP
Sbjct: 9   PN-RAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVLT----------SPGGCCTP 68

Query: 77  KAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 110
           KA++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Sbjct: 69  KAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]
BLAST of MELO3C014591 vs. TAIR10
Match: AT1G51355.1 (AT1G51355.1 unknown protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-14
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 1 

Query: 17  PNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECS--------DGGCSTPKAER 76
           P  + T + +K ++ K P     I + VT           +        + GC TP  E+
Sbjct: 8   PLRRTTTRRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATPSPVSAESGCCTP--EK 67

Query: 77  HRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVAL 114
            RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 68  SRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]
BLAST of MELO3C014591 vs. TAIR10
Match: AT1G60783.1 (AT1G60783.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-06
Identity = 32/93 (34.41%), Postives = 46/93 (49.46%), Query Frame = 1 

Query: 23  KKIKKTTNKKQ------PLQKTEIPAAVTQNDIVEFGDECSDGGCSTPKAERHRIPEILT 82
           +K  +TT  K+       L  T  P +++ + +    DE  D   +TP A+  RIP ++ 
Sbjct: 13  RKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDE--DLCPTTPTADSVRIPTVIP 72

Query: 83  CPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 110
           CPPAPKK +     S+   P  FF+PP+LE  F
Sbjct: 73  CPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]
BLAST of MELO3C014591 vs. TAIR10
Match: AT1G10690.1 (AT1G10690.1 unknown protein)

HSP 1 Score: 48.1 bits (113), Expect = 4.3e-06
Identity = 32/103 (31.07%), Postives = 51/103 (49.51%), Query Frame = 1 

Query: 17  PNLKLTKKIKKTTNKKQ----------PLQKTEIPAAVTQNDIVEFGDECSDGGCSTPKA 76
           P+ +L  +I+++T+ K+          PL++  +   VT  +  E  D+C     +TP A
Sbjct: 7   PHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEE-QDQCP----TTPTA 66

Query: 77  ERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 110
              RIP +  CP APKK +    CS+      +F+PP+LE  F
Sbjct: 67  VSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]
BLAST of MELO3C014591 vs. TAIR10
Match: AT5G02220.1 (AT5G02220.1 unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06
Identity = 24/65 (36.92%), Postives = 35/65 (53.85%), Query Frame = 1 

Query: 48  DIVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSP--IAFFAPPEL 107
           ++VE   E ++ GC+TP++  +RIP    CPP P+K   V     +R P    +F PP+L
Sbjct: 2   EVVERKTEMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVVR---KRDPPRNGYFQPPDL 61

Query: 108 ELFFF 111
           E  F+
Sbjct: 62  ETLFY 63

[Close]
BLAST of MELO3C014591 vs. NCBI nr
Match: gi|659097599|ref|XP_008449712.1| (PREDICTED: uncharacterized protein LOC103491508 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 3.1e-62
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECSDGG 60
           MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECSDGG
Sbjct: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECSDGG 60

Query: 61  CSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120
           CSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV
Sbjct: 61  CSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120

[Close]
BLAST of MELO3C014591 vs. NCBI nr
Match: gi|778693209|ref|XP_011653594.1| (PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 6.7e-57
Identity = 113/121 (93.39%), Postives = 115/121 (95.04%), Query Frame = 1 

Query: 1   MAPSGARVATRT-RRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQNDIVEFGDECSDG 60
           MAPSGAR+ATRT RR+LPNLKLTKKIKKTTNKKQP QK EIP  VTQNDIVEFGDECSDG
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSDG 60

Query: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPKAERHRIPEILTCPPAPKKPRAVSDCS RRSPIAFFAPPELELFFFVALPVPDIS
Sbjct: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPDIS 120

[Close]
BLAST of MELO3C014591 vs. NCBI nr
Match: gi|595881495|ref|XP_007212427.1| (hypothetical protein PRUPE_ppa016642mg [Prunus persica])

HSP 1 Score: 103.2 bits (256), Expect = 3.2e-19
Identity = 61/132 (46.21%), Postives = 73/132 (55.30%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQKTEIPAAVTQN------------- 60
           MAPS AR   +T       K T K +KT  KK+P+ +         N             
Sbjct: 1   MAPS-ARTRAKT-------KTTTKARKTNFKKKPVHQKGKQQITPSNSPSNSSSVVCDDP 60

Query: 61  -------DIVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFF 113
                  D VE  D+ S   CSTPK +R RIPEI+TCPPAPKK R +S+C FRRSPIAFF
Sbjct: 61  PKIEGCADDVEGPDDVSTSACSTPKGQRFRIPEIVTCPPAPKKQRVISNCLFRRSPIAFF 120

[Close]
BLAST of MELO3C014591 vs. NCBI nr
Match: gi|645241929|ref|XP_008227313.1| (PREDICTED: uncharacterized protein LOC103326840 [Prunus mume])

HSP 1 Score: 101.7 bits (252), Expect = 9.4e-19
Identity = 63/132 (47.73%), Postives = 77/132 (58.33%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKKQPLQ---KTEI-PAAVTQN--------- 60
           MAPS AR   +T       K T K ++T  KK+P+    K EI P+    N         
Sbjct: 1   MAPS-ARTRAKT-------KTTTKARRTNFKKKPVNQKGKQEITPSNSPSNSSSVVCDDS 60

Query: 61  -------DIVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFF 113
                  + VE  D+ S   CSTPK +R RIPEI+TCPPAPKK R +S+C FRRSPIAFF
Sbjct: 61  PKIEGGAEDVEGPDDVSTSACSTPKGQRFRIPEIVTCPPAPKKQRVISNCLFRRSPIAFF 120

[Close]
BLAST of MELO3C014591 vs. NCBI nr
Match: gi|764545632|ref|XP_011459506.1| (PREDICTED: uncharacterized protein LOC105349986 [Fragaria vesca subsp. vesca])

HSP 1 Score: 100.5 bits (249), Expect = 2.1e-18
Identity = 61/137 (44.53%), Postives = 80/137 (58.39%), Query Frame = 1 

Query: 1   MAPSGARVATRTRRSLPNLKLTKKIKKTTNKK--------QPLQKTEIP----------- 60
           MAP+G     RTR S P  K  +K ++T  KK        Q +QKT  P           
Sbjct: 1   MAPTG-----RTRASRP--KTARKARRTIVKKPVVVVKPKQKIQKTPPPPPSSPSKSSSS 60

Query: 61  ---AAVTQNDIVEFGD---ECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRS 113
              + +++ + ++F       +   CSTPKA+R RIP+I++CPPAPKKPR  S+C FRRS
Sbjct: 61  LISSGLSKTESIDFEAVDVSATSSPCSTPKAQRFRIPQIVSCPPAPKKPRVSSNCLFRRS 120

The following BLAST results are available for this feature:
BLAST of MELO3C014591 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Q1_CUCSA4.6e-5793.39Uncharacterized protein OS=Cucumis sativus GN=Csa_4G291940 PE=4 SV=1[more]
M5WK19_PRUPE2.2e-1946.21Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016642mg PE=4 SV=1[more]
B9RID1_RICCO1.9e-1845.07Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578060 PE=4 SV=1[more]
W9RHW5_9ROSA1.9e-1843.08Uncharacterized protein OS=Morus notabilis GN=L484_015298 PE=4 SV=1[more]
A0A0B2P2B0_GLYSO3.2e-1837.82Uncharacterized protein OS=Glycine soja GN=glysoja_028474 PE=4 SV=1[more]
BLAST of MELO3C014591 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G20898.11.6e-1646.67 unknown protein[more]
AT1G51355.11.1e-1440.00 unknown protein[more]
AT1G60783.11.1e-0634.41 unknown protein[more]
AT1G10690.14.3e-0631.07 unknown protein[more]
AT5G02220.15.7e-0636.92 unknown protein[more]
BLAST of MELO3C014591 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097599|ref|XP_008449712.1|3.1e-62100.00PREDICTED: uncharacterized protein LOC103491508 [Cucumis melo][more]
gi|778693209|ref|XP_011653594.1|6.7e-5793.39PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis sativus][more]
gi|595881495|ref|XP_007212427.1|3.2e-1946.21hypothetical protein PRUPE_ppa016642mg [Prunus persica][more]
gi|645241929|ref|XP_008227313.1|9.4e-1947.73PREDICTED: uncharacterized protein LOC103326840 [Prunus mume][more]
gi|764545632|ref|XP_011459506.1|2.1e-1844.53PREDICTED: uncharacterized protein LOC105349986 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47384melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014591T1MELO3C014591T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47384MU47384transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142FAMILY NOT NAMEDcoord: 22..113
score: 3.8
NoneNo IPR availablePANTHERPTHR33142:SF4SUBFAMILY NOT NAMEDcoord: 22..113
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C014591Csa1G613590Cucumber (Chinese Long) v2cumeB072
MELO3C014591Csa4G291940Cucumber (Chinese Long) v2cumeB295
MELO3C014591Cla008550Watermelon (97103) v1mewmB419
MELO3C014591ClCG02G023190Watermelon (Charleston Gray)mewcgB376
MELO3C014591Cla97C02G049290Watermelon (97103) v2mewmbB377
MELO3C014591Bhi10G000230Wax gourdmewgoB484
MELO3C014591CSPI04G13950Wild cucumber (PI 183967)cpimeB289
MELO3C014591Cucsa.065600Cucumber (Gy14) v1cgymeB063
MELO3C014591CmaCh20G000880Cucurbita maxima (Rimu)cmameB521
MELO3C014591CmoCh02G012920Cucurbita moschata (Rifu)cmomeB561
MELO3C014591Lsi10G010660Bottle gourd (USVL1VR-Ls)lsimeB072
MELO3C014591Cp4.1LG16g08890Cucurbita pepo (Zucchini)cpemeB278
MELO3C014591Cp4.1LG05g04880Cucurbita pepo (Zucchini)cpemeB696
MELO3C014591Carg02707Silver-seed gourdcarmeB0910
MELO3C014591Carg06901Silver-seed gourdcarmeB0528
MELO3C014591Carg16940Silver-seed gourdcarmeB0474
MELO3C014591CsaV3_1G042810Cucumber (Chinese Long) v3cucmeB075
MELO3C014591CsaV3_4G024290Cucumber (Chinese Long) v3cucmeB294
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C014591Watermelon (Charleston Gray)mewcgB380
MELO3C014591Watermelon (97103) v1mewmB397
MELO3C014591Watermelon (97103) v1mewmB403
MELO3C014591Cucurbita pepo (Zucchini)cpemeB341
MELO3C014591Cucurbita pepo (Zucchini)cpemeB637
MELO3C014591Bottle gourd (USVL1VR-Ls)lsimeB220
MELO3C014591Bottle gourd (USVL1VR-Ls)lsimeB415
MELO3C014591Cucumber (Gy14) v2cgybmeB064
MELO3C014591Cucumber (Gy14) v2cgybmeB494
MELO3C014591Cucumber (Chinese Long) v3cucmeB576
MELO3C014591Watermelon (97103) v2mewmbB381
MELO3C014591Watermelon (97103) v2mewmbB416
MELO3C014591Wax gourdmewgoB487
MELO3C014591Wax gourdmewgoB496
MELO3C014591Melon (DHL92) v3.5.1memeB089
MELO3C014591Melon (DHL92) v3.5.1memeB109
MELO3C014591Cucumber (Gy14) v1cgymeB239
MELO3C014591Cucurbita maxima (Rimu)cmameB077
MELO3C014591Cucurbita maxima (Rimu)cmameB131
MELO3C014591Cucurbita maxima (Rimu)cmameB337
MELO3C014591Cucurbita maxima (Rimu)cmameB572
MELO3C014591Cucurbita moschata (Rifu)cmomeB070
MELO3C014591Cucurbita moschata (Rifu)cmomeB123
MELO3C014591Cucurbita moschata (Rifu)cmomeB509
MELO3C014591Wild cucumber (PI 183967)cpimeB071
MELO3C014591Wild cucumber (PI 183967)cpimeB564