MELO3C014218 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014218
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHemagglutinin-esterase
Locationchr8 : 29377100 .. 29377667 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTCTACGATACTCAAAACCCCAGGATGAAGTTCTTGGTACTTATCTTATCAACGATGATATTGAGTTATACTTGCTCAGCGACTTCAAGAAGGATTGCGTTGGGAGGACTTCATGGACAAGGAAACCAATATTTCTTCAAACAAGCACAAAAAGTTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCATTCATTGCCTCGAGAGTACTTCAACAACTCGCAAGGAAATGACAATGATAATGGCAATGGCGGAAGTGGGTAACTATTGCAAATTCAGAAGAGCAATATATAATATTTGATATATTGTACCAGAGAGGTCCTAGTTCTTTATGTTCTAGCTTTCAGTGTTCCTATGTTCCAAGGAGTAGGCAGGTTATGAAGGTAGAGCCGTCCTGCTGTAATCGATACCATCTGTCTAGAAAATCCAAAGGACTACTAATGGTAACCCCTTAAGTGTATACAATGGTCTATGTTTATGCATGTGTATATGAGAAAGCTATTAATAAGAAGGCACTGATGCTAAATGATACATTATGT

mRNA sequence

AAGTCTACGATACTCAAAACCCCAGGATGAAGTTCTTGGTACTTATCTTATCAACGATGATATTGAGTTATACTTGCTCAGCGACTTCAAGAAGGATTGCGTTGGGAGGACTTCATGGACAAGGAAACCAATATTTCTTCAAACAAGCACAAAAAGTTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCATTCATTGCCTCGAGAGTACTTCAACAACTCGCAAGGAAATGACAATGATAATGGCAATGGCGGAAGTGGGTAACTATTGCAAATTCAGAAGAGCAATATATAATATTTGATATATTGTACCAGAGAGGTCCTAGTTCTTTATGTTCTAGCTTTCAGTGTTCCTATGTTCCAAGGAGTAGGCAGGTTATGAAGGTAGAGCCGTCCTGCTGTAATCGATACCATCTGTCTAGAAAATCCAAAGGACTACTAATGGTAACCCCTTAAGTGTATACAATGGTCTATGTTTATGCATGTGTATATGAGAAAGCTATTAATAAGAAGGCACTGATGCTAAATGATACATTATGT

Coding sequence (CDS)

ATGAAGTTCTTGGTACTTATCTTATCAACGATGATATTGAGTTATACTTGCTCAGCGACTTCAAGAAGGATTGCGTTGGGAGGACTTCATGGACAAGGAAACCAATATTTCTTCAAACAAGCACAAAAAGTTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCATTCATTGCCTCGAGAGTACTTCAACAACTCGCAAGGAAATGACAATGATAATGGCAATGGCGGAAGTGGGTAA

Protein sequence

MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESGISNHHSLPREYFNNSQGNDNDNGNGGSG*
Homology
[Close]
BLAST of MELO3C014218 vs. TrEMBL
Match: A0A0A0KK82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446330 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.7e-43
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1 

Query: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60
          MKFLVLILS MILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG
Sbjct: 1  MKFLVLILSMMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNNSQGNDNDNGNGGSG 89
          +SNHHSLPREYFNNSQGNDNDNGNGGSG
Sbjct: 61 VSNHHSLPREYFNNSQGNDNDNGNGGSG 88

[Close]
BLAST of MELO3C014218 vs. NCBI nr
Match: gi|659096686|ref|XP_008449232.1| (PREDICTED: uncharacterized protein LOC103491167 [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 8.1e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1 

Query: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60
          MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG
Sbjct: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNNSQGNDNDNGNGGSG 89
          ISNHHSLPREYFNNSQGNDNDNGNGGSG
Sbjct: 61 ISNHHSLPREYFNNSQGNDNDNGNGGSG 88

[Close]
BLAST of MELO3C014218 vs. NCBI nr
Match: gi|700192967|gb|KGN48171.1| (hypothetical protein Csa_6G446330 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 5.3e-43
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 1 

Query: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60
          MKFLVLILS MILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG
Sbjct: 1  MKFLVLILSMMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNNSQGNDNDNGNGGSG 89
          +SNHHSLPREYFNNSQGNDNDNGNGGSG
Sbjct: 61 VSNHHSLPREYFNNSQGNDNDNGNGGSG 88

The following BLAST results are available for this feature:
BLAST of MELO3C014218 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK82_CUCSA3.7e-4397.73Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446330 PE=4 SV=1[more]
BLAST of MELO3C014218 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096686|ref|XP_008449232.1|8.1e-44100.00PREDICTED: uncharacterized protein LOC103491167 [Cucumis melo][more]
gi|700192967|gb|KGN48171.1|5.3e-4397.73hypothetical protein Csa_6G446330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU50390melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014218T1MELO3C014218T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50390MU50390transcribed_cluster