Cp4.1LG10g04610 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG10g04610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG10 : 1310312 .. 1310575 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTCTTAGTCCTCATCTTATCAATGATGATCTTGAGCTACACTTGCTCAGTGACTTCAAGAAAGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAAGCAAAAACGGCTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGTAA

mRNA sequence

ATGAAGTTCTTAGTCCTCATCTTATCAATGATGATCTTGAGCTACACTTGCTCAGTGACTTCAAGAAAGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAAGCAAAAACGGCTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGTAA

Coding sequence (CDS)

ATGAAGTTCTTAGTCCTCATCTTATCAATGATGATCTTGAGCTACACTTGCTCAGTGACTTCAAGAAAGATTGCTTTGGCAGGGTTTCATGAACAAGGAAACCAACATTTCTTAAAGCAAGCAAAAACGGCTGAAGAAAATAACAGCAGAAAGAGCAATTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCTTTGCCTAGAGAGTACTTCAACGAGAAGGGTGGAGCTTCGCAAGGAAATGACAATGGAAGTGGGTAA

Protein sequence

MKFLVLILSMMILSYTCSVTSRKIALAGFHEQGNQHFLKQAKTAEENNSRKSNFKHPESGISNHHSLPREYFNEKGGASQGNDNGSG
BLAST of Cp4.1LG10g04610 vs. TrEMBL
Match: A0A0A0KK82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446330 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-27
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 1

Query: 1  MKFLVLILSMMILSYTCSVTSRKIALAGFHEQGNQHFLKQAKTAEENNSRKSNFKHPESG 60
          MKFLVLILSMMILSYTCS TSR+IAL G H QGNQ+F KQA+  EENNSRKSNFKHPESG
Sbjct: 1  MKFLVLILSMMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 88
          +SNHHSLPREYFN     SQGNDN +G
Sbjct: 61 VSNHHSLPREYFNN----SQGNDNDNG 83

BLAST of Cp4.1LG10g04610 vs. NCBI nr
Match: gi|700192967|gb|KGN48171.1| (hypothetical protein Csa_6G446330 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 1

Query: 1  MKFLVLILSMMILSYTCSVTSRKIALAGFHEQGNQHFLKQAKTAEENNSRKSNFKHPESG 60
          MKFLVLILSMMILSYTCS TSR+IAL G H QGNQ+F KQA+  EENNSRKSNFKHPESG
Sbjct: 1  MKFLVLILSMMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 88
          +SNHHSLPREYFN     SQGNDN +G
Sbjct: 61 VSNHHSLPREYFNN----SQGNDNDNG 83

BLAST of Cp4.1LG10g04610 vs. NCBI nr
Match: gi|659096686|ref|XP_008449232.1| (PREDICTED: uncharacterized protein LOC103491167 [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 2.0e-26
Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 1

Query: 1  MKFLVLILSMMILSYTCSVTSRKIALAGFHEQGNQHFLKQAKTAEENNSRKSNFKHPESG 60
          MKFLVLILS MILSYTCS TSR+IAL G H QGNQ+F KQA+  EENNSRKSNFKHPESG
Sbjct: 1  MKFLVLILSTMILSYTCSATSRRIALGGLHGQGNQYFFKQAQKVEENNSRKSNFKHPESG 60

Query: 61 ISNHHSLPREYFNEKGGASQGNDNGSG 88
          ISNHHSLPREYFN     SQGNDN +G
Sbjct: 61 ISNHHSLPREYFNN----SQGNDNDNG 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KK82_CUCSA3.6e-2779.31Uncharacterized protein OS=Cucumis sativus GN=Csa_6G446330 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|700192967|gb|KGN48171.1|5.2e-2779.31hypothetical protein Csa_6G446330 [Cucumis sativus][more]
gi|659096686|ref|XP_008449232.1|2.0e-2679.31PREDICTED: uncharacterized protein LOC103491167 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g04610.1Cp4.1LG10g04610.1mRNA


The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g04610Melon (DHL92) v3.6.1cpemedB057
Cp4.1LG10g04610Melon (DHL92) v3.6.1cpemedB069
Cp4.1LG10g04610Melon (DHL92) v3.6.1cpemedB072
Cp4.1LG10g04610Silver-seed gourdcarcpeB0221
Cp4.1LG10g04610Silver-seed gourdcarcpeB0337
Cp4.1LG10g04610Silver-seed gourdcarcpeB0348
Cp4.1LG10g04610Silver-seed gourdcarcpeB0959
Cp4.1LG10g04610Cucumber (Chinese Long) v3cpecucB0070
Cp4.1LG10g04610Cucumber (Chinese Long) v3cpecucB0093
Cp4.1LG10g04610Cucumber (Chinese Long) v3cpecucB0095
Cp4.1LG10g04610Wax gourdcpewgoB0067
Cp4.1LG10g04610Wax gourdcpewgoB0082
Cp4.1LG10g04610Wax gourdcpewgoB0100
Cp4.1LG10g04610Cucurbita pepo (Zucchini)cpecpeB070
Cp4.1LG10g04610Cucurbita pepo (Zucchini)cpecpeB075
Cp4.1LG10g04610Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g04610Cucurbita pepo (Zucchini)cpecpeB092
Cp4.1LG10g04610Cucurbita pepo (Zucchini)cpecpeB107
Cp4.1LG10g04610Cucumber (Gy14) v1cgycpeB0314
Cp4.1LG10g04610Cucumber (Gy14) v1cgycpeB0798
Cp4.1LG10g04610Cucurbita maxima (Rimu)cmacpeB254
Cp4.1LG10g04610Cucurbita maxima (Rimu)cmacpeB808
Cp4.1LG10g04610Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g04610Cucurbita moschata (Rifu)cmocpeB218
Cp4.1LG10g04610Cucurbita moschata (Rifu)cmocpeB762
Cp4.1LG10g04610Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g04610Wild cucumber (PI 183967)cpecpiB060
Cp4.1LG10g04610Cucumber (Chinese Long) v2cpecuB064
Cp4.1LG10g04610Bottle gourd (USVL1VR-Ls)cpelsiB063
Cp4.1LG10g04610Watermelon (Charleston Gray)cpewcgB058
Cp4.1LG10g04610Watermelon (97103) v1cpewmB065
Cp4.1LG10g04610Melon (DHL92) v3.5.1cpemeB055
Cp4.1LG10g04610Cucumber (Gy14) v2cgybcpeB291
Cp4.1LG10g04610Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g04610Cucumber (Gy14) v2cgybcpeB712