MELO3C013976 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013976
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLipid transfer protein
Locationchr6 : 33105060 .. 33107445 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCCCAAAATTTTCATCAATCTCCAAGAGAAAACCGTTCGGTTAATCAATGGCTGGCGGTGAGATCTCTGTCCCTTTCGCAGTCGTTGCGGTGGTGGTTCTAGCGGTGGCCGTTGGCTTCGTGGAAGCACAGGATGTGCCAGACTGTGTTTCCAAGCTTACACCATGTGTGGATTTCCTCAAGTCCAATAATCCGCCCGCGACTTGCTGCGATCCCATCAAGGAAGCTGTGGCGACTCAGCTTCCGTGCCTTTGTAACCTCTACGTGACGCCGGGTTTGTTGAATTCGTTCGGCGTTAATGTCTCCGATGCTATTCATCTCACTAATGCTTGCGGCGTCCCTGTCGAACTCTCCAAGTGCAAAAGTAGGGATTATAAACGTTGTTTTTCTTCTTGATCTTCTTGTTGTTGATTTGAAATTTGATTGTTGTTTTTTTTTTGGCTCTGTCGTCGGTGAATACAGCTGGTGCTCCGGCTCCGCAACAGGGTGCTCCTTCACCACCGGGAGGTAAGTTTTCGGAGCTCGTAGGGCTATTTTGGTATTTTCCGTTTCTTATTTTCATTTTCCAATTTGTTGAGGTTTTTTTCTTTTGTGAATATATTCACGTTTATGACAGCTGGATTATTTTTTGCTGCATGAATTAAATCAATATTCATCAGCTCACCAACCTTGACTTTTATTTATCATTTTAGTTTCATAACTTTTTCCATTTAAATTTTTATACTTTGATAATTTTAGTCTTACTGTTAATTTATTATAATTTTATTCATAACGTATTTAGTCTAAATTTTAGGAAATTATTATTGCTATCATTTAATGGAACTCATTGTTAAAATTAACTATTGTTGGGCTACATCTAAGATTTTTTTTAAAATCCAAAATACAAGAACAAAATTTGAATAAATTTCTAAGGGACTAAAATAGTTTTTTTTTTTAAAAAAAAAAAGTTAGATATGAAAATTATATTGAACTTTGTTATTTATTTATAAACGTTTTTTAATAAATATGTATTTTATATTTTGAATCAACTAGAAATATGAAATGATAGTGATGTGAAACTATGTTTTTCCACCTCAACTCATTGTCACACAACTCTAAAGTGAAATTGTTATGGATATAAAAGAAATTGTAAAATAGAATAGAAAGAGTAAGATGAACTTTACTATATTTTGTAAATAGTTTCAATATTTTGTTATTTTTAAAAATATTTTGATTTTTAAACAATGTGAAGCGATGGATGCGATGGTTCAAAGCAAATCAAACATGGATCCCACCAATTTCCCAACAACTTTCTTACTTTAAAACATTTTATTATTTTTCAAAATTTTAATGTATCTCTTTGTAAAATATTTTATTTTGAAAAGTATCAACAAGAAATTGGGTATTCTTTTGTTGCTGTTAGATTATTCTATAAAGTTCTCTCAAGTAATTGTTTATTTACAAGTGGGTTTTTTTTTTTTCTTTCTTTTCAATGTAATGCTTAGAAAAAGTTATAGAAAATATAGTGGCAAAAGTAATATTTTCAAACAAGAAATTTGCCTATAAAATTATTTTTAGAAATAAGTATTCTTTGTAGGGTTTAATATTTTAGAAACATTACAAATTGTTTTTTTTTTTTCTTGCTGCATGTTTGGAAGAATTTTAGTTAATTATTGAAGCCATTTTTAGATATAGATATAGTCTATACACAATCACTCAAAGGCTATTAAACAAATTATAAAGTGGGACTTATATAGAAAGTAGAACTAATTCTTCTTAGAAAAAAGAACAATTTCTTCAAATAGAGGTATAATGTTTAAATTGTTGTGAAATAGATATGATTTTATGTTTTACATAATTCTTAGTTATGAACTAATATTAATTCTGCCATTTATTTTTGGAACAGTTCCTGGGAATGATGCACAAAAATTTGGGTCGACTGGAATTACATCTCTAGTACTTCTGTTCTTGGCCTCTCTAGTTGTTTATTAGGATCTTACCATACTGAGCATTATATTATTTGATTAAGCTATTCCATTGATCTAATAACGTTGATAAAGTTTCTTTATATATTTTAGGGTTTATAGTGAGTGTGAAGACTTCATATTTGGAGCATTTGTTAGATTTTCATTTGATCCCTTTCAATAACGTGTAATACTCTTACTATTATAATATTCAAGCTTCATCCGATCAATTCTCAAATATAGCAAAATTTCTAAAAAAATGAAAAGTATATCAAAATCTGTCATTGTCTATATCTTATAGAAGTTTTCCACTGATGAATAGACTGTAAGAGTTTAGTAATGATAGAAGTTGATCGGTGACAGACTTTGTTGTAATTGTAATTTTAAAAAAATGTTGCTACATACTTGGTTACTATATCATTAAAAGTGATATACTAA

mRNA sequence

ATGAACTCCCAAAATTTTCATCAATCTCCAAGAGAAAACCGTTCGGTTAATCAATGGCTGGCGGTGAGATCTCTGTCCCTTTCGCAGTCGTTGCGGTGGTGGTTCTAGCGGTGGCCGTTGGCTTCGTGGAAGCACAGGATGTGCCAGACTGTGTTTCCAAGCTTACACCATGTGTGGATTTCCTCAAGTCCAATAATCCGCCCGCGACTTGCTGCGATCCCATCAAGGAAGCTGTGGCGACTCAGCTTCCGTGCCTTTGTAACCTCTACGTGACGCCGGGTTTGTTGAATTCGTTCGGCGTTAATGTCTCCGATGCTATTCATCTCACTAATGCTTGCGGCGTCCCTGTCGAACTCTCCAAGTGCAAAAGTAGGGATTATAAACGTTGTTTTTCTTCTTGATCTTCTTGTTGTTGATTTGAAATTTGATTGTTGTTTTTTTTTTGGCTCTGTCGTCGGTGAATACAGCTGGTGCTCCGGCTCCGCAACAGGGTGCTCCTTCACCACCGGGAGTTCCTGGGAATGATGCACAAAAATTTGGGTCGACTGGAATTACATCTCTAGTACTTCTGTTCTTGGCCTCTCTAGTTGTTTATTAGGATCTTACCATACTGAGCATTATATTATTTGATTAAGCTATTCCATTGATCTAATAACGTTGATAAAGTTTCTTTATATATTTTAGGGTTTATAGTGAGTGTGAAGACTTCATATTTGGAGCATTTGTTAGATTTTCATTTGATCCCTTTCAATAACGTGTAATACTCTTACTATTATAATATTCAAGCTTCATCCGATCAATTCTCAAATATAGCAAAATTTCTAAAAAAATGAAAAGTATATCAAAATCTGTCATTGTCTATATCTTATAGAAGTTTTCCACTGATGAATAGACTGTAAGAGTTTAGTAATGATAGAAGTTGATCGGTGACAGACTTTGTTGTAATTGTAATTTTAAAAAAATGTTGCTACATACTTGGTTACTATATCATTAAAAGTGATATACTAA

Coding sequence (CDS)

ATGGCTGGCGGTGAGATCTCTGTCCCTTTCGCAGTCGTTGCGGTGGTGGTTCTAGCGGTGGCCGTTGGCTTCGTGGAAGCACAGGATGTGCCAGACTGTGTTTCCAAGCTTACACCATGTGTGGATTTCCTCAAGTCCAATAATCCGCCCGCGACTTGCTGCGATCCCATCAAGGAAGCTGTGGCGACTCAGCTTCCGTGCCTTTGTAACCTCTACGTGACGCCGGGTTTGTTGAATTCGTTCGGCGTTAATGTCTCCGATGCTATTCATCTCACTAATGCTTGCGGCGTCCCTGTCGAACTCTCCAAGTGCAAAAGTAGGGATTATAAACGTTGTTTTTCTTCTTGA

Protein sequence

MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEAVATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKSRDYKRCFSS*
Homology
[Close]
BLAST of MELO3C013976 vs. TrEMBL
Match: A0A0A0L702_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035840 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.6e-67
Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60
           MA GEISVP ++VAVVVL VAV F+EAQ+VPDCVSKLT CVDFLKSNNPPATCCDPIKEA
Sbjct: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60

Query: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPG 120
           VATQLPCLCNLY TPGLLNSFGVNV+DAIHLTNACGVPVELSKCKTGAPAPQQG PSPPG
Sbjct: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120

Query: 121 VPGNDAQKFGSTGITSLVLLFLASLVVY 149
           VPGN A+KFG TGITSL L+FLASL  Y
Sbjct: 121 VPGNHAEKFGLTGITSL-LVFLASLAFY 147

[Close]
BLAST of MELO3C013976 vs. TrEMBL
Match: A0A067K1E9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20770 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-31
Identity = 70/151 (46.36%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNN--PPATCCDPIK 60
           MA   +S    +VA++ ++      +AQ++P C  KL PC +++ +    PP+TCC+PIK
Sbjct: 1   MASLTMSTAAMMVAILFVSTTTIITQAQNIPSCAQKLIPCAEYISNTTVTPPSTCCNPIK 60

Query: 61  EAVATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPS 120
           EAV T+  CLCNLY TPGLL+ FG+NV+ A+ LT  CGV  +LS C K  AP    G P 
Sbjct: 61  EAVNTERACLCNLYNTPGLLSGFGINVTQALGLTKRCGVSTDLSACSKAEAPTAGAGTP- 120

Query: 121 PPGVPGNDAQKFGSTGITSLVLLFLASLVVY 149
           PPGVPGND  +   TG +SLVLL+ +  ++Y
Sbjct: 121 PPGVPGNDGSRMAWTGFSSLVLLWASYSLIY 150

[Close]
BLAST of MELO3C013976 vs. TrEMBL
Match: V4VLK6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022260mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-30
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 12  VVAVVVLAVA-VGFVEAQDVPDCVSKLTPCVDFLKSNNPP-ATCCDPIKEAVATQLPCLC 71
           V+AV+  A+A     +AQ+ P C SKL PC  FL +   P A CC+ IKEAVA +LPCLC
Sbjct: 66  VMAVIAAAIASTSLTDAQNTPSCASKLVPCASFLNTTTKPNAECCNSIKEAVANELPCLC 125

Query: 72  NLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCK-TGAPAPQQGAPSPPGVPGNDAQK 131
            LY TPGLL+SF V++ DA+ LT  C VP +LS CK +GAP+P    P PPG PGND   
Sbjct: 126 TLYNTPGLLSSFHVSLEDALRLTRDCNVPSDLSSCKNSGAPSPGSSVP-PPGTPGNDGN- 185

Query: 132 FGST------GITSLVLLFLASLVVY 149
            G+T      GITSL+L + AS+++Y
Sbjct: 186 -GATAREAWAGITSLLLFWAASMMLY 208

[Close]
BLAST of MELO3C013976 vs. TrEMBL
Match: I3S0V1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-28
Identity = 66/148 (44.59%), Postives = 91/148 (61.49%), Query Frame = 1 

Query: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQ---DVPDCVSKLTPCVDFLKSNNPPATCCDPI 60
           M GG  ++P  +VA+V    A+ F  AQ    +P C   L PC D L S NPPA+CCDPI
Sbjct: 1   MGGGRSAMPLMMVALVFTIGAIFFSTAQAQSSIPSCAQNLIPCADHLTSTNPPASCCDPI 60

Query: 61  KEAVATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPS 120
           K+ V TQL CLCNL+ +PGLL SF ++   A+ L+  CGV  +LS CK+G+ AP   +  
Sbjct: 61  KKTVETQLTCLCNLFYSPGLLQSFNISTDQALQLSRRCGVTSDLSSCKSGS-APSPASVP 120

Query: 121 PPGVPGND----AQKFGSTGITSLVLLF 142
           PP  PG+D    A +    G+++L+LL+
Sbjct: 121 PPATPGSDKGSSAGRVSFAGVSTLLLLW 147

[Close]
BLAST of MELO3C013976 vs. TrEMBL
Match: B9RBQ4_RICCO (Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1679880 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.2e-26
Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 1 

Query: 6   ISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNN-PPATCCDPIKEAVATQ 65
           +S    +VA++ L   +   +AQD   C   L  C ++L +   PP +CC  IK+AV   
Sbjct: 1   MSTAVMMVALLFLTTTIAPSQAQDTASCAQNLISCAEYLNTTTTPPDSCCSSIKDAVTND 60

Query: 66  LPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPSPPGVPG 125
           L CLCNLY TPGLL SF VNV+ A+ LT  CGV  +LS C K GA AP    P PPGVPG
Sbjct: 61  LTCLCNLYNTPGLLESFKVNVTQALALTGRCGVNSDLSACSKAGADAPT--TPPPPGVPG 120

Query: 126 NDAQKFGSTGITSLVLLFLASL 146
           ND  +   TG +SL+L+   SL
Sbjct: 121 NDGSRMAWTGFSSLLLMCATSL 140

[Close]
BLAST of MELO3C013976 vs. TAIR10
Match: AT1G62790.1 (AT1G62790.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-21
Identity = 56/144 (38.89%), Postives = 75/144 (52.08%), Query Frame = 1 

Query: 10  FAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPAT-CCDPIKEAVATQLPCL 69
           FA    V+  + V  +EAQ   +CVSKL PC + L +   P   CCD IKEAV  +L CL
Sbjct: 8   FAAAMTVMALLLVPTIEAQT--ECVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCL 67

Query: 70  CNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKT-GAPAPQQGAPSPPGVPGND-- 129
           C +Y +PGLL  F V    A+ L+  C V  +LS C   GAP+P+   P PP   GN   
Sbjct: 68  CTIYTSPGLLAQFNVTTEKALGLSRRCNVTTDLSACTAKGAPSPKASLP-PPAPAGNTKK 127

Query: 130 ----AQKFGSTGITSLVLLFLASL 146
                 K    G+T+++L  ++S+
Sbjct: 128 DAGAGNKLAGYGVTTVILSLISSI 148

[Close]
BLAST of MELO3C013976 vs. TAIR10
Match: AT1G70250.1 (AT1G70250.1 receptor serine/threonine kinase, putative)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-19
Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 1 

Query: 14  AVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPAT-CCDPIKEAVATQLPCLCNLY 73
           A+++ AV V  VE +   +CVSK+ PC  FL +   P+T CC+ IKEA+     CLC +Y
Sbjct: 4   AMMIFAVLVTVVEVEAQTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKDFSCLCTIY 63

Query: 74  VTPGLLNSFGVNVSDAIHLTNACGVPVELSKCK-TGAPAPQQGAPSPP 120
            TPGLL  F +    A+ L   CGV  +LS C  +GAP P      PP
Sbjct: 64  NTPGLLAQFNITTDQALGLNLRCGVNTDLSACSGSGAPPPPPDLFPPP 111

[Close]
BLAST of MELO3C013976 vs. TAIR10
Match: AT1G18280.1 (AT1G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 9.1e-14
Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = 1 

Query: 26  EAQDVPDCVSKLTPCVDFLK-SNNPPATCCDPIKEAVATQLPCLCNLYVTPGLLNSFGVN 85
           +A  +P C+ KL PC  +L  +  PPATCC P+ E VA    CLC ++    +L S  + 
Sbjct: 35  DAHSLP-CIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLT 94

Query: 86  VSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPGVPGNDAQKFGSTGITS 137
             +A+ L  ACG   ++S CKT A      + +PP  P        STG  S
Sbjct: 95  KENALDLPKACGAKADVSLCKTSAGT--NSSSTPPATPKTPPASSTSTGTGS 143

[Close]
BLAST of MELO3C013976 vs. TAIR10
Match: AT1G73560.1 (AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-13
Identity = 47/142 (33.10%), Postives = 67/142 (47.18%), Query Frame = 1 

Query: 13  VAVVVLAVAVGFVEAQ------DVPDCVSKLTPCVDFLKSNNPPA--TCCDPIKEAVATQ 72
           +AVVV  V +  VEA        +  C+ KL PC  ++ S NPP   +CC P+KE V   
Sbjct: 7   LAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKD 66

Query: 73  LPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPGVPGN 132
            PCLC  +  P +L +  +   +A+ L  ACGV  ++S C   A       PSP   PG+
Sbjct: 67  APCLCIAFNNPEVLKALNLTKENALLLPKACGVNPDVSLCSKIA------TPSPIASPGS 126

Query: 133 DAQKFGSTGITSLVLLFLASLV 147
                 ++ I+     FL++ V
Sbjct: 127 TNGTSSASTISFNRFSFLSAFV 142

[Close]
BLAST of MELO3C013976 vs. TAIR10
Match: AT1G05450.2 (AT1G05450.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 8.8e-09
Identity = 39/110 (35.45%), Postives = 49/110 (44.55%), Query Frame = 1 

Query: 31  PDCVSKLTPCVDFLKSNN--PPATCCDPIKEAVATQLPCLCNLYVTPGLLNSFGVNVSDA 90
           P  +S +T C  FL      P + CC  +K    T + CLC L VT G+  S  +N + A
Sbjct: 35  PSMLSSVTGCTSFLTGGGSFPTSDCCGALKSLTGTGMDCLC-LIVTAGVPISIPINRTLA 94

Query: 91  IHLTNACGVPVELSKCK-TGAPAPQQGAPS-PPGVPGNDAQKFGSTGITS 137
           I L  ACG+P    +CK + AP P  G  S  P     D+Q     G  S
Sbjct: 95  ISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTTSPTDSQTSDPEGSAS 143

[Close]
BLAST of MELO3C013976 vs. NCBI nr
Match: gi|659096047|ref|XP_008448898.1| (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 4.5e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60
           MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA
Sbjct: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60

Query: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPG 120
           VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPG
Sbjct: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPG 120

Query: 121 VPGNDAQKFGSTGITSLVLLFLASLVVY 149
           VPGNDAQKFGSTGITSLVLLFLASLVVY
Sbjct: 121 VPGNDAQKFGSTGITSLVLLFLASLVVY 148

[Close]
BLAST of MELO3C013976 vs. NCBI nr
Match: gi|449460411|ref|XP_004147939.1| (PREDICTED: lipid transfer-like protein VAS [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67
Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1 

Query: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60
           MA GEISVP ++VAVVVL VAV F+EAQ+VPDCVSKLT CVDFLKSNNPPATCCDPIKEA
Sbjct: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60

Query: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPG 120
           VATQLPCLCNLY TPGLLNSFGVNV+DAIHLTNACGVPVELSKCKTGAPAPQQG PSPPG
Sbjct: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120

Query: 121 VPGNDAQKFGSTGITSLVLLFLASLVVY 149
           VPGN A+KFG TGITSL L+FLASL  Y
Sbjct: 121 VPGNHAEKFGLTGITSL-LVFLASLAFY 147

[Close]
BLAST of MELO3C013976 vs. NCBI nr
Match: gi|802741590|ref|XP_012087118.1| (PREDICTED: non-specific lipid-transfer protein [Jatropha curcas])

HSP 1 Score: 142.9 bits (359), Expect = 4.5e-31
Identity = 70/151 (46.36%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNN--PPATCCDPIK 60
           MA   +S    +VA++ ++      +AQ++P C  KL PC +++ +    PP+TCC+PIK
Sbjct: 1   MASLTMSTAAMMVAILFVSTTTIITQAQNIPSCAQKLIPCAEYISNTTVTPPSTCCNPIK 60

Query: 61  EAVATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKC-KTGAPAPQQGAPS 120
           EAV T+  CLCNLY TPGLL+ FG+NV+ A+ LT  CGV  +LS C K  AP    G P 
Sbjct: 61  EAVNTERACLCNLYNTPGLLSGFGINVTQALGLTKRCGVSTDLSACSKAEAPTAGAGTP- 120

Query: 121 PPGVPGNDAQKFGSTGITSLVLLFLASLVVY 149
           PPGVPGND  +   TG +SLVLL+ +  ++Y
Sbjct: 121 PPGVPGNDGSRMAWTGFSSLVLLWASYSLIY 150

[Close]
BLAST of MELO3C013976 vs. NCBI nr
Match: gi|985445945|ref|XP_006477262.2| (PREDICTED: protein YLS3 [Citrus sinensis])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 74/143 (51.75%), Postives = 95/143 (66.43%), Query Frame = 1 

Query: 12  VVAVVVLAVA-VGFVEAQDVPDCVSKLTPCVDFLKSNNPP-ATCCDPIKEAVATQLPCLC 71
           V+AV+  A+A     +AQ++P C SKL PC  FL S   P A CC+ IKEAVA +LPCLC
Sbjct: 11  VMAVIAAAIASTSLTDAQNIPSCASKLVPCATFLNSTTKPNAECCNSIKEAVANELPCLC 70

Query: 72  NLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCK-TGAPAPQQGAPSPPGVPGND--- 131
            LY TPGLL+SF V++ DA+ LT  C VP +LS CK +GAP+P    P PPG PGND   
Sbjct: 71  TLYNTPGLLSSFNVSLEDALRLTRNCNVPSDLSSCKNSGAPSPGSSVP-PPGTPGNDNGA 130

Query: 132 AQKFGSTGITSLVLLFLASLVVY 149
             +    GITSL+L + AS+++Y
Sbjct: 131 TAREAWAGITSLLLFWAASMMLY 152

[Close]
BLAST of MELO3C013976 vs. NCBI nr
Match: gi|567895802|ref|XP_006440389.1| (hypothetical protein CICLE_v10022260mg [Citrus clementina])

HSP 1 Score: 139.0 bits (349), Expect = 6.5e-30
Identity = 75/146 (51.37%), Postives = 96/146 (65.75%), Query Frame = 1 

Query: 12  VVAVVVLAVA-VGFVEAQDVPDCVSKLTPCVDFLKSNNPP-ATCCDPIKEAVATQLPCLC 71
           V+AV+  A+A     +AQ+ P C SKL PC  FL +   P A CC+ IKEAVA +LPCLC
Sbjct: 66  VMAVIAAAIASTSLTDAQNTPSCASKLVPCASFLNTTTKPNAECCNSIKEAVANELPCLC 125

Query: 72  NLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCK-TGAPAPQQGAPSPPGVPGNDAQK 131
            LY TPGLL+SF V++ DA+ LT  C VP +LS CK +GAP+P    P PPG PGND   
Sbjct: 126 TLYNTPGLLSSFHVSLEDALRLTRDCNVPSDLSSCKNSGAPSPGSSVP-PPGTPGNDGN- 185

Query: 132 FGST------GITSLVLLFLASLVVY 149
            G+T      GITSL+L + AS+++Y
Sbjct: 186 -GATAREAWAGITSLLLFWAASMMLY 208

The following BLAST results are available for this feature:
BLAST of MELO3C013976 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L702_CUCSA1.6e-6787.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035840 PE=4 SV=1[more]
A0A067K1E9_JATCU3.2e-3146.36Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20770 PE=3 SV=1[more]
V4VLK6_9ROSI4.6e-3051.37Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022260mg PE=4 SV=1[more]
I3S0V1_LOTJA2.5e-2844.59Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
B9RBQ4_RICCO5.2e-2646.48Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1679880 PE=4 SV=1[more]
BLAST of MELO3C013976 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G62790.13.5e-2138.89 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G70250.17.2e-1942.59 receptor serine/threonine kinase, putative[more]
AT1G18280.19.1e-1435.71 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73560.14.5e-1333.10 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G05450.28.8e-0935.45 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of MELO3C013976 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096047|ref|XP_008448898.1|4.5e-79100.00PREDICTED: lipid transfer-like protein VAS [Cucumis melo][more]
gi|449460411|ref|XP_004147939.1|2.3e-6787.16PREDICTED: lipid transfer-like protein VAS [Cucumis sativus][more]
gi|802741590|ref|XP_012087118.1|4.5e-3146.36PREDICTED: non-specific lipid-transfer protein [Jatropha curcas][more]
gi|985445945|ref|XP_006477262.2|1.3e-3051.75PREDICTED: protein YLS3 [Citrus sinensis][more]
gi|567895802|ref|XP_006440389.1|6.5e-3051.37hypothetical protein CICLE_v10022260mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008289 lipid binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU47546melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013976T2MELO3C013976T2mRNA
MELO3C013976T1MELO3C013976T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU47546MU47546transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 48..62
score: 9.0E-5coord: 82..99
score: 9.0E-5coord: 29..45
score: 9.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 14..104
score: 2.2
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 29..109
score: 2.55
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 34..99
score: 3.
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 1..105
score: 2.5
NoneNo IPR availablePANTHERPTHR33044:SF37SUBFAMILY NOT NAMEDcoord: 1..105
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C013976Csa3G035840Cucumber (Chinese Long) v2cumeB243
MELO3C013976Cla005682Watermelon (97103) v1mewmB452
MELO3C013976ClCG10G003060Watermelon (Charleston Gray)mewcgB415
MELO3C013976Cla97C10G187590Watermelon (97103) v2mewmbB430
MELO3C013976CSPI03G03070Wild cucumber (PI 183967)cpimeB240
MELO3C013976Cucsa.320540Cucumber (Gy14) v1cgymeB532
MELO3C013976CmaCh16G010500Cucurbita maxima (Rimu)cmameB290
MELO3C013976Cp4.1LG14g08690Cucurbita pepo (Zucchini)cpemeB185
MELO3C013976CsGy3G003000Cucumber (Gy14) v2cgybmeB209
MELO3C013976Carg25268Silver-seed gourdcarmeB0852
MELO3C013976CsaV3_3G003100Cucumber (Chinese Long) v3cucmeB246
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013976Wax gourdmewgoB515
MELO3C013976Wax gourdmewgoB528
MELO3C013976Melon (DHL92) v3.5.1memeB017
MELO3C013976Cucumber (Gy14) v1cgymeB498
MELO3C013976Cucurbita maxima (Rimu)cmameB279
MELO3C013976Cucurbita maxima (Rimu)cmameB764
MELO3C013976Cucurbita moschata (Rifu)cmomeB270
MELO3C013976Cucurbita moschata (Rifu)cmomeB283
MELO3C013976Cucurbita moschata (Rifu)cmomeB756
MELO3C013976Wild cucumber (PI 183967)cpimeB398
MELO3C013976Cucumber (Chinese Long) v2cumeB401
MELO3C013976Watermelon (Charleston Gray)mewcgB418
MELO3C013976Watermelon (97103) v1mewmB477
MELO3C013976Cucurbita pepo (Zucchini)cpemeB175
MELO3C013976Cucurbita pepo (Zucchini)cpemeB814
MELO3C013976Bottle gourd (USVL1VR-Ls)lsimeB030
MELO3C013976Bottle gourd (USVL1VR-Ls)lsimeB446
MELO3C013976Cucumber (Gy14) v2cgybmeB348
MELO3C013976Silver-seed gourdcarmeB0856
MELO3C013976Cucumber (Chinese Long) v3cucmeB410
MELO3C013976Watermelon (97103) v2mewmbB419