CSPI03G03070 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G03070
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Lipid transfer protein
Location	Chr3 : 2508602 .. 2511121 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCATTTCACACTTCTTGTGAAATTAGGAATAAATTCTGCCTTTTCCATTTCCACCTATAAACTCCGCCAAAATTTTCATCAATCTCCAACGTTTAATCAATGGCTCGCGGTGAGATCTCTGTCCCCGTCTCACTCGTGGCGGTGGTGGTTCTAGTGGTGGCCGTTGCCTTCCTGGAGGCACAGGAGGTCCCAGACTGTGTTTCCAAGCTTACATCATGTGTGGATTTCCTCAAGTCCAATAATCCCCCGGCGACTTGCTGCGATCCCATCAAGGAAGCTGTGGCCACGCAGCTTCCCTGCCTTTGTAACCTGTATACGACGCCGGGTTTGTTGAATTCCTTCGGCGTTAATGTCACCGATGCTATTCATCTCACTAATGCTTGCGGCGTCCCTGTTGAACTCTCCAAGTGCAAAAGTAGGGATTAAACGTTGTTTTATTCTTCTTGATCTTCTCGTTGTTGGTTTGAAATTTGATTGTTGTTTGATTATTGAATACAGCTGGTGCTCCGGCTCCGCAGCAGGGTGGTCCTTCACCACCGGGAGGTAATTTTCTCGAACTCGTACGGACCTTTTTTTTGGTCGAAAGAACTCGTAGGGCTGTTTTCGTCATTTCGGTTTCTTATTTTCATTTTCAAATTTGTTGAGATATTTATTTTTGTGAATATTTGAAGTTTATGACAGCTGGATTAATTTGCTGCATGAATTAAATCAATGTTCATCCGCTCTCACCAACCTTCACTTTTATTTATCAAAGTCTCCTATTAGTTCCATTTTAGCTTTTATATCTCCAAAAATTTTGTCATATCTTTTCTATTCATAATGTATTTAGTCTAAATTTTAAAAATATGTTACATGAAAATTATCATTTAATCTAACTCAGTTGTTCGATTATAATTAATTATTGTTTGACTACATCTAAGATTATTTGAAAATAGAGTAATTAAAATTTTAAAAAGTTTGAACTAAAATTGAATAAAACTTCAAGGGATTTGAATGGTATTCTTCTAAAAAAAAGTTAAATATGAAAATTATATTGAACTTTGTTATTTTTTTTTTTTAATATTATCTAACTCTATAAATGTTTTAAATATATATATATTAAGTAGAAAATTTTTAAAATTTTGAATCAATTAGAAATATGAAATGATGTGACGTGAAAGTATGTTTCTCTTTGAAGTGTTTTCTTTTTTTAAAAAAAAAAAAAATTAAGGGTAGTTTAATTTTAAAATGTTGATTAATCTTTGAAGGTCTTTAATGAACAAAAAATATATAAATAATGTTGTTTATAAAATTATTTGGTAAAATATTGTTGTTTTCAAACTTTATATTAATATAGCTTTTTGGTCTTCTAGACAACCCTAGAAAATTAAAAACTATATGAGAAGATAACTTTGTAGTCTTGAAATTAAAAAATAATAATAATAAAAGAAAGAACTTTAGGGTTTGTTGAATTACTTTACTAGATGGGAAATCATTTTATAAAGAGAGAAATTAAATGATTGTTGGAATATATTGGGAAATCTTAATGTGAAACCCTCTTTTTCTTTCTTTTATTTTTTTTTTCTTTTCTATTTATTGTATTGTGAGCCCTGCCTAATTAATTTGAAAACTTATTGATTGTTCAAACCAAACCAAACCAAACAAGGAGCCCACTAATTTCCCAACCACTCTCTTACTTTAAATATTTTATTATTTTTCAAAATTTTAATCCATTTCTTTGTAGAAAATAGTGTATTTTGATTTTGAAAAGTATCAACAAGAAATTGGAAAGTTATTGAAAATGTAGTGGCAAAACTATTATTTTCAAACAAGTAATTAAACATAAGAATAAACAAAAAAACAACCAGCCAAAAATTTGCCTATAAAATTATTTTTAGAAATTAAGTATTCTTTGCATGTTTGGAAGAATTTTAGTTCATTGTTGAAGCCATTTTTAGATAGTCTATACACAATCACTCAAAAGCTAATAAACAAACTATATATAAAGTGGGACTATGTAATAGAAAGTAAACTTAATTCGTCTTTGATTTCCTTTTTCTTCAAGTAGGTATGTGTTTAAATTGATCTGAAGTAGATATGATTGTTGTTTCTGTACTCCATTTTATGTTTTACGTATTTAAATGGTATTGATTTGTGGTTGTTTTTGGAACAGTTCCTGGAAATCACGCAGAAAAATTTGGGTTGACTGGAATTACATCTCTACTCGTATTCTTGGCCTCTCTAGCTTTTTATTAGGATCTTACCATACTCAGCCTTATTTGATTAAGCTATTATCCTAGTGAATAACGTTGATCAATTTTCTTTATATATTTTAGGGATTATAGTGAGTGTTCGAGACTTCATGTTTGAAGCATTTGTTAGATTATCTTATATAATAATATGTTTTGTTCCTTTACCACAATATTTATTTTGATTTGAGTTATTATGGCCTAATTGGCTTGCTCATAGCCTCATTCCATCCCTTTCAATAATTTGTAATACAATTTTCTATTATATTTGAGTTTTAATATTCCCTCTT

mRNA sequence

ATGGCTCGCGGTGAGATCTCTGTCCCCGTCTCACTCGTGGCGGTGGTGGTTCTAGTGGTGGCCGTTGCCTTCCTGGAGGCACAGGAGGTCCCAGACTGTGTTTCCAAGCTTACATCATGTGTGGATTTCCTCAAGTCCAATAATCCCCCGGCGACTTGCTGCGATCCCATCAAGGAAGCTGTGGCCACGCAGCTTCCCTGCCTTTGTAACCTGTATACGACGCCGGGTTTGTTGAATTCCTTCGGCGTTAATGTCACCGATGCTATTCATCTCACTAATGCTTGCGGCGTCCCTGTTGAACTCTCCAAGTGCAAAACTGGTGCTCCGGCTCCGCAGCAGGGTGGTCCTTCACCACCGGGAGTTCCTGGAAATCACGCAGAAAAATTTGGGTTGACTGGAATTACATCTCTACTCGTATTCTTGGCCTCTCTAGCTTTTTATTAG

Coding sequence (CDS)

ATGGCTCGCGGTGAGATCTCTGTCCCCGTCTCACTCGTGGCGGTGGTGGTTCTAGTGGTGGCCGTTGCCTTCCTGGAGGCACAGGAGGTCCCAGACTGTGTTTCCAAGCTTACATCATGTGTGGATTTCCTCAAGTCCAATAATCCCCCGGCGACTTGCTGCGATCCCATCAAGGAAGCTGTGGCCACGCAGCTTCCCTGCCTTTGTAACCTGTATACGACGCCGGGTTTGTTGAATTCCTTCGGCGTTAATGTCACCGATGCTATTCATCTCACTAATGCTTGCGGCGTCCCTGTTGAACTCTCCAAGTGCAAAACTGGTGCTCCGGCTCCGCAGCAGGGTGGTCCTTCACCACCGGGAGTTCCTGGAAATCACGCAGAAAAATTTGGGTTGACTGGAATTACATCTCTACTCGTATTCTTGGCCTCTCTAGCTTTTTATTAG

Homology

[Close]

BLAST of CSPI03G03070 vs. TrEMBL
Match: A0A0A0L702_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035840 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.2e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60
           MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA
Sbjct: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60

Query: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120
           VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG
Sbjct: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120

Query: 121 VPGNHAEKFGLTGITSLLVFLASLAFY 148
           VPGNHAEKFGLTGITSLLVFLASLAFY
Sbjct: 121 VPGNHAEKFGLTGITSLLVFLASLAFY 147

[Close]

BLAST of CSPI03G03070 vs. TrEMBL
Match: A0A067K1E9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20770 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-26
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 1


Query: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNN--PPATCCDPIK 60
           MA   +S    +VA++ +       +AQ +P C  KL  C +++ +    PP+TCC+PIK
Sbjct: 1   MASLTMSTAAMMVAILFVSTTTIITQAQNIPSCAQKLIPCAEYISNTTVTPPSTCCNPIK 60

Query: 61  EAVATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQG-GPS 120
           EAV T+  CLCNLY TPGLL+ FG+NVT A+ LT  CGV  +LS C + A AP  G G  
Sbjct: 61  EAVNTERACLCNLYNTPGLLSGFGINVTQALGLTKRCGVSTDLSAC-SKAEAPTAGAGTP 120

Query: 121 PPGVPGNHAEKFGLTGITSLLVFLAS 144
           PPGVPGN   +   TG +SL++  AS
Sbjct: 121 PPGVPGNDGSRMAWTGFSSLVLLWAS 145

[Close]

BLAST of CSPI03G03070 vs. TrEMBL
Match: B9RBQ4_RICCO (Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1679880 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-25
Identity = 69/144 (47.92%), Postives = 87/144 (60.42%), Query Frame = 1


Query: 6   ISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNN-PPATCCDPIKEAVATQ 65
           +S  V +VA++ L   +A  +AQ+   C   L SC ++L +   PP +CC  IK+AV   
Sbjct: 1   MSTAVMMVALLFLTTTIAPSQAQDTASCAQNLISCAEYLNTTTTPPDSCCSSIKDAVTND 60

Query: 66  LPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKC-KTGAPAPQQGGPSPPGVPG 125
           L CLCNLY TPGLL SF VNVT A+ LT  CGV  +LS C K GA AP    P PPGVPG
Sbjct: 61  LTCLCNLYNTPGLLESFKVNVTQALALTGRCGVNSDLSACSKAGADAPTT--PPPPGVPG 120

Query: 126 NHAEKFGLTGITSLLVFLASLAFY 148
           N   +   TG +SLL+  A+  FY
Sbjct: 121 NDGSRMAWTGFSSLLLMCATSLFY 142

[Close]

BLAST of CSPI03G03070 vs. TrEMBL
Match: I3S0V1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-24
Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 1


Query: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQ---EVPDCVSKLTSCVDFLKSNNPPATCCDPI 60
           M  G  ++P+ +VA+V  + A+ F  AQ    +P C   L  C D L S NPPA+CCDPI
Sbjct: 1   MGGGRSAMPLMMVALVFTIGAIFFSTAQAQSSIPSCAQNLIPCADHLTSTNPPASCCDPI 60

Query: 61  KEAVATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPS 120
           K+ V TQL CLCNL+ +PGLL SF ++   A+ L+  CGV  +LS CK+G+ AP      
Sbjct: 61  KKTVETQLTCLCNLFYSPGLLQSFNISTDQALQLSRRCGVTSDLSSCKSGS-APSPASVP 120

Query: 121 PPGVP----GNHAEKFGLTGITSLLVFLASLAF 147
           PP  P    G+ A +    G+++LL+  +S+ F
Sbjct: 121 PPATPGSDKGSSAGRVSFAGVSTLLLLWSSMPF 152

[Close]

BLAST of CSPI03G03070 vs. TrEMBL
Match: V4VLK6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022260mg PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.8e-24
Identity = 69/142 (48.59%), Postives = 88/142 (61.97%), Query Frame = 1


Query: 11  SLVAVVVLVVAVA---FLEAQEVPDCVSKLTSCVDFLKSNNPP-ATCCDPIKEAVATQLP 70
           +L+ + V+  A+A     +AQ  P C SKL  C  FL +   P A CC+ IKEAVA +LP
Sbjct: 63  TLMVMAVIAAAIASTSLTDAQNTPSCASKLVPCASFLNTTTKPNAECCNSIKEAVANELP 122

Query: 71  CLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCK-TGAPAPQQGGPSPPGVPGNH 130
           CLC LY TPGLL+SF V++ DA+ LT  C VP +LS CK +GAP+P    P PPG PGN 
Sbjct: 123 CLCTLYNTPGLLSSFHVSLEDALRLTRDCNVPSDLSSCKNSGAPSPGSSVP-PPGTPGND 182

Query: 131 AE----KFGLTGITSLLVFLAS 144
                 +    GITSLL+F A+
Sbjct: 183 GNGATAREAWAGITSLLLFWAA 203

[Close]

BLAST of CSPI03G03070 vs. TAIR10
Match: AT1G62790.1 (AT1G62790.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 2.3e-17
Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 1


Query: 16  VVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPAT-CCDPIKEAVATQLPCLCNLYTT 75
           V+ ++ V  +EAQ   +CVSKL  C + L +   P   CCD IKEAV  +L CLC +YT+
Sbjct: 14  VMALLLVPTIEAQT--ECVSKLVPCFNDLNTTTTPVKECCDSIKEAVEKELTCLCTIYTS 73

Query: 76  PGLLNSFGVNVTDAIHLTNACGVPVELSKCKT-GAPAPQQGGPSPPGVPGNHAEKFGL-- 135
           PGLL  F V    A+ L+  C V  +LS C   GAP+P+   P PP   GN  +  G   
Sbjct: 74  PGLLAQFNVTTEKALGLSRRCNVTTDLSACTAKGAPSPKASLP-PPAPAGNTKKDAGAGN 133

Query: 136 ----TGITSLLVFLASLAFY 148
                G+T++++ L S  F+
Sbjct: 134 KLAGYGVTTVILSLISSIFF 150

[Close]

BLAST of CSPI03G03070 vs. TAIR10
Match: AT1G70250.1 (AT1G70250.1 receptor serine/threonine kinase, putative)

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-15
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 1


Query: 14  AVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPAT-CCDPIKEAVATQLPCLCNLY 73
           A+++  V V  +E +   +CVSK+  C  FL +   P+T CC+ IKEA+     CLC +Y
Sbjct: 4   AMMIFAVLVTVVEVEAQTECVSKIVPCFRFLNTTTKPSTDCCNSIKEAMEKDFSCLCTIY 63

Query: 74  TTPGLLNSFGVNVTDAIHLTNACGVPVELSKCK-TGAPAPQQGGPSPP 120
            TPGLL  F +    A+ L   CGV  +LS C  +GAP P      PP
Sbjct: 64  NTPGLLAQFNITTDQALGLNLRCGVNTDLSACSGSGAPPPPPDLFPPP 111

[Close]

BLAST of CSPI03G03070 vs. TAIR10
Match: AT1G18280.1 (AT1G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 3.2e-11
Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 1


Query: 26  EAQEVPDCVSKLTSCVDFLK-SNNPPATCCDPIKEAVATQLPCLCNLYTTPGLLNSFGVN 85
           +A  +P C+ KL  C  +L  +  PPATCC P+ E VA    CLC ++    +L S  + 
Sbjct: 35  DAHSLP-CIQKLMPCQPYLHLATPPPATCCMPLNEIVAKDATCLCAVFNNVDMLKSLNLT 94

Query: 86  VTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPGVP 123
             +A+ L  ACG   ++S CKT A        +PP  P
Sbjct: 95  KENALDLPKACGAKADVSLCKTSAGT--NSSSTPPATP 129

[Close]

BLAST of CSPI03G03070 vs. TAIR10
Match: AT1G73560.1 (AT1G73560.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 46/143 (32.17%), Postives = 69/143 (48.25%), Query Frame = 1


Query: 13  VAVVVLVVAVAFLEAQ------EVPDCVSKLTSCVDFLKSNNPPA--TCCDPIKEAVATQ 72
           +AVVV VV +  +EA       ++  C+ KL  C  ++ S NPP   +CC P+KE V   
Sbjct: 7   LAVVVAVVVLYSVEATAQGGNPQLTACLQKLLPCQPYIHSLNPPPPPSCCGPMKEIVEKD 66

Query: 73  LPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKC-KTGAPAPQQGGPSPPGVPG 132
            PCLC  +  P +L +  +   +A+ L  ACGV  ++S C K   P+P     S  G   
Sbjct: 67  APCLCIAFNNPEVLKALNLTKENALLLPKACGVNPDVSLCSKIATPSPIASPGSTNGT-- 126

Query: 133 NHAEKFGLTGITSLLVFLASLAF 147
           + A        + L  F+A + F
Sbjct: 127 SSASTISFNRFSFLSAFVAMIFF 147

[Close]

BLAST of CSPI03G03070 vs. NCBI nr
Match: gi|449460411|ref|XP_004147939.1| (PREDICTED: lipid transfer-like protein VAS [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 6.0e-76
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1


Query: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60
           MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA
Sbjct: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60

Query: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120
           VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG
Sbjct: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120

Query: 121 VPGNHAEKFGLTGITSLLVFLASLAFY 148
           VPGNHAEKFGLTGITSLLVFLASLAFY
Sbjct: 121 VPGNHAEKFGLTGITSLLVFLASLAFY 147

[Close]

BLAST of CSPI03G03070 vs. NCBI nr
Match: gi|659096047|ref|XP_008448898.1| (PREDICTED: lipid transfer-like protein VAS [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 8.1e-65
Identity = 129/148 (87.16%), Postives = 136/148 (91.89%), Query Frame = 1


Query: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEA 60
           MA GEISVP ++VAVVVL VAV F+EAQ+VPDCVSKLT CVDFLKSNNPPATCCDPIKEA
Sbjct: 1   MAGGEISVPFAVVAVVVLAVAVGFVEAQDVPDCVSKLTPCVDFLKSNNPPATCCDPIKEA 60

Query: 61  VATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPG 120
           VATQLPCLCNLY TPGLLNSFGVNV+DAIHLTNACGVPVELSKCKTGAPAPQQG PSPPG
Sbjct: 61  VATQLPCLCNLYVTPGLLNSFGVNVSDAIHLTNACGVPVELSKCKTGAPAPQQGAPSPPG 120

Query: 121 VPGNHAEKFGLTGITSL-LVFLASLAFY 148
           VPGN A+KFG TGITSL L+FLASL  Y
Sbjct: 121 VPGNDAQKFGSTGITSLVLLFLASLVVY 148

[Close]

BLAST of CSPI03G03070 vs. NCBI nr
Match: gi|1009157060|ref|XP_015896570.1| (PREDICTED: lipid transfer-like protein VAS [Ziziphus jujuba])

HSP 1 Score: 133.7 bits (335), Expect = 2.7e-28
Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 1


Query: 11  SLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNNPPATCCDPIKEAVATQLPCLCN 70
           S+  VVVLV  VA L   +   C +KL  C  +L S  PP  CC+P+KE V   L CLC 
Sbjct: 13  SVAVVVVLVGMVASLADAQENSCANKLVPCASYLNSTTPPPACCNPLKETVTNDLDCLCT 72

Query: 71  LYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQGGPSPPGVPGNHAEKFG 130
           LY TPG L + G+N+T A+ LT ACGVP +  +C    P+PQ   P PPGVPG+ A+   
Sbjct: 73  LYNTPGFLENLGLNITQALRLTQACGVPADRVQCNATGPSPQSV-PPPPGVPGSDAQMIV 132

Query: 131 LTGITSLLVFLASLAFY 148
            TGI +LL+FLAS+ FY
Sbjct: 133 WTGIYTLLIFLASMMFY 148

[Close]

BLAST of CSPI03G03070 vs. NCBI nr
Match: gi|802741590|ref|XP_012087118.1| (PREDICTED: non-specific lipid-transfer protein [Jatropha curcas])

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-26
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 1


Query: 1   MARGEISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNN--PPATCCDPIK 60
           MA   +S    +VA++ +       +AQ +P C  KL  C +++ +    PP+TCC+PIK
Sbjct: 1   MASLTMSTAAMMVAILFVSTTTIITQAQNIPSCAQKLIPCAEYISNTTVTPPSTCCNPIK 60

Query: 61  EAVATQLPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKCKTGAPAPQQG-GPS 120
           EAV T+  CLCNLY TPGLL+ FG+NVT A+ LT  CGV  +LS C + A AP  G G  
Sbjct: 61  EAVNTERACLCNLYNTPGLLSGFGINVTQALGLTKRCGVSTDLSAC-SKAEAPTAGAGTP 120

Query: 121 PPGVPGNHAEKFGLTGITSLLVFLAS 144
           PPGVPGN   +   TG +SL++  AS
Sbjct: 121 PPGVPGNDGSRMAWTGFSSLVLLWAS 145

[Close]

BLAST of CSPI03G03070 vs. NCBI nr
Match: gi|255537043|ref|XP_002509588.1| (PREDICTED: lipid transfer-like protein VAS [Ricinus communis])

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-25
Identity = 69/144 (47.92%), Postives = 87/144 (60.42%), Query Frame = 1


Query: 6   ISVPVSLVAVVVLVVAVAFLEAQEVPDCVSKLTSCVDFLKSNN-PPATCCDPIKEAVATQ 65
           +S  V +VA++ L   +A  +AQ+   C   L SC ++L +   PP +CC  IK+AV   
Sbjct: 1   MSTAVMMVALLFLTTTIAPSQAQDTASCAQNLISCAEYLNTTTTPPDSCCSSIKDAVTND 60

Query: 66  LPCLCNLYTTPGLLNSFGVNVTDAIHLTNACGVPVELSKC-KTGAPAPQQGGPSPPGVPG 125
           L CLCNLY TPGLL SF VNVT A+ LT  CGV  +LS C K GA AP    P PPGVPG
Sbjct: 61  LTCLCNLYNTPGLLESFKVNVTQALALTGRCGVNSDLSACSKAGADAPTT--PPPPGVPG 120

Query: 126 NHAEKFGLTGITSLLVFLASLAFY 148
           N   +   TG +SLL+  A+  FY
Sbjct: 121 NDGSRMAWTGFSSLLLMCATSLFY 142

The following BLAST results are available for this feature:

BLAST of CSPI03G03070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI03G03070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L702_CUCSA	4.2e-76	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G035840 PE=4 SV=1	[more]
A0A067K1E9_JATCU	2.3e-26	45.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20770 PE=3 SV=1	[more]
B9RBQ4_RICCO	1.5e-25	47.92	Lipid binding protein, putative OS=Ricinus communis GN=RCOM_1679880 PE=4 SV=1	[more]
I3S0V1_LOTJA	1.7e-24	41.83	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
V4VLK6_9ROSI	2.8e-24	48.59	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022260mg PE=4 SV=1	[more]

BLAST of CSPI03G03070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62790.1	2.3e-17	39.29	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G70250.1	2.8e-15	39.81	receptor serine/threonine kinase, putative	[more]
AT1G18280.1	3.2e-11	35.71	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G73560.1	1.2e-10	32.17	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CSPI03G03070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460411\|ref\|XP_004147939.1\|	6.0e-76	100.00	PREDICTED: lipid transfer-like protein VAS [Cucumis sativus]	[more]
gi\|659096047\|ref\|XP_008448898.1\|	8.1e-65	87.16	PREDICTED: lipid transfer-like protein VAS [Cucumis melo]	[more]
gi\|1009157060\|ref\|XP_015896570.1\|	2.7e-28	48.91	PREDICTED: lipid transfer-like protein VAS [Ziziphus jujuba]	[more]
gi\|802741590\|ref\|XP_012087118.1\|	3.3e-26	45.89	PREDICTED: non-specific lipid-transfer protein [Jatropha curcas]	[more]
gi\|255537043\|ref\|XP_002509588.1\|	2.2e-25	47.92	PREDICTED: lipid transfer-like protein VAS [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G03070.1	CSPI03G03070.1	mRNA
CSPI03G03070.2	CSPI03G03070.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 15..104 score: 1.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..102 score: 5.89
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 33..102 score: 5.
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..119 score: 5.5
None	No IPR available	PANTHER	PTHR33044:SF37	SUBFAMILY NOT NAMED	coord: 1..119 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G03070	Cla005682	Watermelon (97103) v1	cpiwmB195
CSPI03G03070	Csa3G035840	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G03070	MELO3C013976	Melon (DHL92) v3.5.1	cpimeB240
CSPI03G03070	ClCG10G003060	Watermelon (Charleston Gray)	cpiwcgB190
CSPI03G03070	Lsi07G013370	Bottle gourd (USVL1VR-Ls)	cpilsiB227
CSPI03G03070	MELO3C013976.2	Melon (DHL92) v3.6.1	cpimedB225
CSPI03G03070	CsaV3_3G003100	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G03070	Cla97C10G187590	Watermelon (97103) v2	cpiwmbB184
CSPI03G03070	BhiUN285G22	Wax gourd	cpiwgoB268
CSPI03G03070	Cucsa.320540	Cucumber (Gy14) v1	cgycpiB484
CSPI03G03070	CmaCh16G010500	Cucurbita maxima (Rimu)	cmacpiB333
CSPI03G03070	CmoCh16G010980	Cucurbita moschata (Rifu)	cmocpiB324
CSPI03G03070	Cp4.1LG14g08690	Cucurbita pepo (Zucchini)	cpecpiB216
CSPI03G03070	CsGy3G003000	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G03070	Carg25268	Silver-seed gourd	carcpiB0898

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G03070	Silver-seed gourd	carcpiB0901
CSPI03G03070	Cucumber (Chinese Long) v3	cpicucB167
CSPI03G03070	Watermelon (97103) v2	cpiwmbB180
CSPI03G03070	Wax gourd	cpiwgoB257
CSPI03G03070	Wild cucumber (PI 183967)	cpicpiB115
CSPI03G03070	Cucumber (Gy14) v1	cgycpiB452
CSPI03G03070	Cucurbita maxima (Rimu)	cmacpiB285
CSPI03G03070	Cucurbita maxima (Rimu)	cmacpiB838
CSPI03G03070	Cucurbita moschata (Rifu)	cmocpiB275
CSPI03G03070	Cucurbita moschata (Rifu)	cmocpiB823
CSPI03G03070	Cucumber (Chinese Long) v2	cpicuB140
CSPI03G03070	Melon (DHL92) v3.5.1	cpimeB164
CSPI03G03070	Watermelon (Charleston Gray)	cpiwcgB211
CSPI03G03070	Watermelon (97103) v1	cpiwmB263
CSPI03G03070	Cucurbita pepo (Zucchini)	cpecpiB170
CSPI03G03070	Cucurbita pepo (Zucchini)	cpecpiB852
CSPI03G03070	Bottle gourd (USVL1VR-Ls)	cpilsiB154
CSPI03G03070	Melon (DHL92) v3.6.1	cpimedB153
CSPI03G03070	Cucumber (Gy14) v2	cgybcpiB212